View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14755_high_15 (Length: 237)

Name: NF14755_high_15
Description: NF14755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14755_high_15
NF14755_high_15
[»] chr8 (37 HSPs)
chr8 (1-222)||(40585644-40585865)
chr8 (44-181)||(11712061-11712198)
chr8 (60-198)||(7597569-7597707)
chr8 (44-112)||(4283565-4283631)
chr8 (44-112)||(18655441-18655507)
chr8 (44-112)||(30143381-30143447)
chr8 (44-112)||(42435052-42435118)
chr8 (47-178)||(3231859-3231990)
chr8 (44-112)||(1292524-1292590)
chr8 (44-112)||(4731699-4731765)
chr8 (44-112)||(27811319-27811385)
chr8 (44-112)||(42498235-42498301)
chr8 (60-112)||(1822333-1822385)
chr8 (60-112)||(1856778-1856830)
chr8 (46-112)||(12702697-12702761)
chr8 (46-112)||(15212827-15212891)
chr8 (44-112)||(5689312-5689378)
chr8 (44-112)||(18141861-18141927)
chr8 (44-112)||(19491760-19491826)
chr8 (44-112)||(33352191-33352257)
chr8 (44-112)||(40221786-40221852)
chr8 (44-112)||(44353834-44353900)
chr8 (44-112)||(10240195-10240262)
chr8 (50-180)||(29796387-29796518)
chr8 (44-112)||(1746280-1746345)
chr8 (44-93)||(34256568-34256615)
chr8 (44-112)||(1345432-1345498)
chr8 (44-112)||(3303731-3303797)
chr8 (45-105)||(4162545-4162603)
chr8 (44-108)||(6599017-6599079)
chr8 (44-108)||(6674470-6674532)
chr8 (44-112)||(9765786-9765852)
chr8 (44-108)||(18106140-18106201)
chr8 (44-112)||(31218298-31218364)
chr8 (59-112)||(40321121-40321174)
chr8 (44-105)||(11137073-11137136)
chr8 (61-147)||(30291611-30291699)
[»] chr6 (20 HSPs)
chr6 (44-182)||(25073539-25073676)
chr6 (44-112)||(2973000-2973066)
chr6 (44-112)||(17758064-17758130)
chr6 (44-112)||(21588972-21589038)
chr6 (44-112)||(21593705-21593771)
chr6 (2-112)||(5043668-5043776)
chr6 (44-112)||(603149-603215)
chr6 (44-112)||(17763031-17763097)
chr6 (44-112)||(26830184-26830250)
chr6 (44-112)||(3808769-3808836)
chr6 (44-112)||(5406261-5406327)
chr6 (44-112)||(5410586-5410652)
chr6 (44-104)||(9183092-9183150)
chr6 (44-112)||(26954347-26954413)
chr6 (44-112)||(28137469-28137535)
chr6 (44-112)||(31404736-31404802)
chr6 (44-108)||(2908503-2908566)
chr6 (44-98)||(5413455-5413507)
chr6 (44-109)||(4045467-4045531)
chr6 (44-112)||(30834597-30834663)
[»] chr5 (31 HSPs)
chr5 (46-181)||(30802801-30802934)
chr5 (44-182)||(35616140-35616277)
chr5 (46-182)||(316733-316868)
chr5 (44-112)||(533810-533876)
chr5 (43-112)||(538066-538133)
chr5 (44-112)||(28278357-28278423)
chr5 (44-112)||(13695751-13695818)
chr5 (44-112)||(213506-213572)
chr5 (48-112)||(9049407-9049469)
chr5 (44-112)||(13239792-13239858)
chr5 (44-112)||(13488244-13488310)
chr5 (44-112)||(33831721-33831787)
chr5 (44-112)||(39468610-39468676)
chr5 (44-112)||(42309996-42310062)
chr5 (44-112)||(42428491-42428557)
chr5 (43-127)||(8445741-8445824)
chr5 (39-178)||(10054872-10055009)
chr5 (44-112)||(30682983-30683051)
chr5 (45-112)||(38747046-38747111)
chr5 (44-110)||(40147304-40147368)
chr5 (44-109)||(16452124-16452187)
chr5 (44-112)||(25412801-25412867)
chr5 (43-108)||(33906090-33906154)
chr5 (44-111)||(5058087-5058152)
chr5 (44-104)||(32583343-32583402)
chr5 (61-112)||(3075734-3075785)
chr5 (47-108)||(3325958-3326018)
chr5 (44-112)||(8566007-8566073)
chr5 (44-104)||(28750716-28750774)
chr5 (141-182)||(30793098-30793139)
chr5 (44-104)||(42426296-42426354)
[»] chr2 (31 HSPs)
chr2 (46-112)||(24398098-24398163)
chr2 (44-147)||(26353189-26353291)
chr2 (47-189)||(7597074-7597217)
chr2 (11-112)||(11049594-11049694)
chr2 (45-112)||(33648212-33648278)
chr2 (44-120)||(17490209-17490284)
chr2 (44-112)||(1631793-1631859)
chr2 (44-112)||(33162511-33162577)
chr2 (44-112)||(36318070-36318136)
chr2 (44-112)||(45726970-45727036)
chr2 (44-107)||(17057430-17057491)
chr2 (44-107)||(17085413-17085474)
chr2 (44-182)||(42019931-42020070)
chr2 (44-112)||(723805-723871)
chr2 (44-112)||(2334479-2334545)
chr2 (44-112)||(6595067-6595133)
chr2 (60-176)||(30218120-30218236)
chr2 (44-112)||(35446945-35447011)
chr2 (44-112)||(36773603-36773669)
chr2 (44-112)||(42362393-42362459)
chr2 (44-107)||(7815334-7815395)
chr2 (44-108)||(34811282-34811345)
chr2 (44-108)||(42261546-42261609)
chr2 (61-112)||(42288186-42288237)
chr2 (48-102)||(3897041-3897094)
chr2 (44-112)||(4484391-4484458)
chr2 (130-183)||(5868419-5868473)
chr2 (44-112)||(5723317-5723383)
chr2 (44-111)||(36988137-36988202)
chr2 (60-108)||(41446184-41446232)
chr2 (44-108)||(41454279-41454342)
[»] chr4 (52 HSPs)
chr4 (50-175)||(53345195-53345319)
chr4 (44-112)||(4588000-4588066)
chr4 (44-112)||(27417026-27417092)
chr4 (44-112)||(50262762-50262828)
chr4 (44-112)||(54883061-54883127)
chr4 (44-112)||(56178698-56178764)
chr4 (44-118)||(5429713-5429786)
chr4 (44-175)||(22882811-22882941)
chr4 (44-175)||(22934475-22934605)
chr4 (44-175)||(33089856-33089986)
chr4 (60-181)||(6677440-6677562)
chr4 (44-112)||(2209754-2209821)
chr4 (48-181)||(21703900-21704033)
chr4 (50-112)||(26699509-26699570)
chr4 (44-178)||(34112790-34112925)
chr4 (44-108)||(8665453-8665515)
chr4 (44-112)||(9927519-9927585)
chr4 (44-112)||(12073433-12073499)
chr4 (44-112)||(26175697-26175763)
chr4 (44-112)||(36994565-36994631)
chr4 (44-112)||(37740666-37740732)
chr4 (44-112)||(40632486-40632552)
chr4 (44-112)||(50673908-50673974)
chr4 (44-112)||(54199967-54200033)
chr4 (44-112)||(12119580-12119647)
chr4 (61-112)||(36463465-36463516)
chr4 (45-159)||(44570427-44570539)
chr4 (46-112)||(48142440-48142505)
chr4 (44-112)||(379421-379487)
chr4 (44-112)||(6655997-6656063)
chr4 (44-112)||(24969153-24969219)
chr4 (44-112)||(34570475-34570541)
chr4 (44-112)||(46147452-46147518)
chr4 (44-112)||(48143084-48143150)
chr4 (44-112)||(48893699-48893765)
chr4 (118-182)||(38811322-38811386)
chr4 (44-98)||(5370144-5370196)
chr4 (118-177)||(41961393-41961452)
chr4 (44-109)||(31474195-31474258)
chr4 (44-109)||(35662485-35662548)
chr4 (44-112)||(41964456-41964523)
chr4 (44-112)||(46703541-46703608)
chr4 (62-112)||(55085442-55085492)
chr4 (44-112)||(3913489-3913555)
chr4 (44-112)||(5207903-5207969)
chr4 (44-112)||(6542240-6542306)
chr4 (44-112)||(12743986-12744052)
chr4 (44-112)||(12744108-12744174)
chr4 (44-112)||(12745375-12745441)
chr4 (44-112)||(26364277-26364343)
chr4 (60-104)||(33989893-33989937)
chr4 (60-108)||(34788850-34788898)
[»] chr3 (42 HSPs)
chr3 (46-181)||(20937628-20937762)
chr3 (46-182)||(1313867-1314003)
chr3 (44-112)||(54593745-54593811)
chr3 (44-175)||(35138766-35138896)
chr3 (44-147)||(32891108-32891211)
chr3 (44-112)||(49199530-49199597)
chr3 (134-183)||(2020118-2020167)
chr3 (44-112)||(7762306-7762372)
chr3 (44-112)||(23198000-23198066)
chr3 (44-112)||(23200199-23200265)
chr3 (44-112)||(29810909-29810975)
chr3 (44-112)||(30236166-30236232)
chr3 (44-112)||(31314486-31314552)
chr3 (44-112)||(34491253-34491319)
chr3 (44-112)||(40735424-40735490)
chr3 (44-112)||(46173398-46173464)
chr3 (44-112)||(46860515-46860581)
chr3 (61-175)||(3148067-3148181)
chr3 (46-112)||(5236519-5236583)
chr3 (44-93)||(9636187-9636234)
chr3 (44-112)||(760888-760954)
chr3 (44-112)||(4569993-4570059)
chr3 (44-112)||(7764505-7764571)
chr3 (44-112)||(19683950-19684016)
chr3 (44-112)||(22835063-22835129)
chr3 (44-112)||(37408499-37408565)
chr3 (44-112)||(44331586-44331652)
chr3 (44-112)||(45095204-45095270)
chr3 (44-112)||(53921564-53921630)
chr3 (61-109)||(5373277-5373325)
chr3 (60-112)||(5433951-5434003)
chr3 (44-110)||(51398857-51398921)
chr3 (44-112)||(43401862-43401929)
chr3 (44-112)||(5258205-5258271)
chr3 (44-112)||(5260384-5260450)
chr3 (44-112)||(9581323-9581389)
chr3 (44-112)||(16499070-16499136)
chr3 (44-112)||(29196447-29196513)
chr3 (44-112)||(29682400-29682466)
chr3 (44-112)||(29813104-29813170)
chr3 (44-182)||(33191802-33191938)
chr3 (44-112)||(40734539-40734605)
[»] chr7 (44 HSPs)
chr7 (47-112)||(31105457-31105520)
chr7 (44-112)||(32358115-32358181)
chr7 (44-112)||(36574576-36574643)
chr7 (44-178)||(5116579-5116712)
chr7 (44-110)||(6360013-6360077)
chr7 (43-112)||(1113698-1113765)
chr7 (44-112)||(2361033-2361099)
chr7 (44-112)||(4586202-4586268)
chr7 (44-112)||(6432012-6432078)
chr7 (44-112)||(22270014-22270080)
chr7 (44-112)||(23565122-23565188)
chr7 (44-112)||(27347858-27347924)
chr7 (44-112)||(29608778-29608844)
chr7 (44-112)||(30024793-30024859)
chr7 (44-112)||(47674004-47674070)
chr7 (44-112)||(48491620-48491686)
chr7 (61-112)||(2390323-2390374)
chr7 (46-127)||(23344000-23344080)
chr7 (46-112)||(31733032-31733096)
chr7 (46-112)||(4253591-4253656)
chr7 (60-181)||(27073788-27073909)
chr7 (60-181)||(27204404-27204525)
chr7 (44-112)||(496044-496110)
chr7 (44-112)||(18126685-18126751)
chr7 (44-112)||(19502219-19502285)
chr7 (44-112)||(23555081-23555147)
chr7 (44-112)||(26417357-26417423)
chr7 (44-104)||(34310777-34310835)
chr7 (44-112)||(35853955-35854021)
chr7 (44-112)||(36146469-36146534)
chr7 (64-112)||(22328470-22328518)
chr7 (44-111)||(25615895-25615960)
chr7 (87-148)||(5514111-5514173)
chr7 (44-112)||(8359377-8359444)
chr7 (44-112)||(2759258-2759324)
chr7 (59-112)||(3259036-3259089)
chr7 (44-112)||(4510609-4510675)
chr7 (44-112)||(4512451-4512517)
chr7 (44-112)||(14069894-14069960)
chr7 (44-112)||(14379922-14379988)
chr7 (44-112)||(38671283-38671349)
chr7 (59-112)||(43864285-43864338)
chr7 (44-112)||(48599395-48599461)
chr7 (44-98)||(4178829-4178880)
[»] scaffold0466 (1 HSPs)
scaffold0466 (44-112)||(7368-7434)
[»] chr1 (48 HSPs)
chr1 (44-112)||(31925768-31925834)
chr1 (44-112)||(47255401-47255467)
chr1 (46-160)||(22079309-22079422)
chr1 (44-110)||(2263035-2263100)
chr1 (59-112)||(928050-928103)
chr1 (44-112)||(3156906-3156972)
chr1 (44-112)||(3189371-3189437)
chr1 (44-112)||(3198188-3198254)
chr1 (44-112)||(3207027-3207093)
chr1 (44-112)||(10925264-10925333)
chr1 (44-112)||(11348739-11348805)
chr1 (44-112)||(13547150-13547216)
chr1 (44-112)||(19754536-19754602)
chr1 (44-112)||(28220287-28220353)
chr1 (44-112)||(28265615-28265681)
chr1 (44-112)||(31659279-31659345)
chr1 (44-112)||(42298036-42298102)
chr1 (44-112)||(49918391-49918457)
chr1 (60-112)||(3460737-3460789)
chr1 (44-115)||(16455659-16455728)
chr1 (46-112)||(4552700-4552764)
chr1 (50-113)||(37282758-37282820)
chr1 (44-112)||(7482291-7482358)
chr1 (44-160)||(16914235-16914351)
chr1 (44-105)||(28223482-28223541)
chr1 (44-112)||(37168338-37168405)
chr1 (44-112)||(834228-834294)
chr1 (44-112)||(13138037-13138103)
chr1 (44-112)||(15820348-15820414)
chr1 (44-112)||(41360955-41361021)
chr1 (44-112)||(44455201-44455267)
chr1 (44-112)||(50167236-50167302)
chr1 (44-108)||(6808497-6808560)
chr1 (45-108)||(19752731-19752792)
chr1 (44-175)||(25652064-25652194)
chr1 (39-105)||(9109475-9109540)
chr1 (47-112)||(29136288-29136351)
chr1 (44-112)||(37033133-37033200)
chr1 (59-112)||(47115212-47115266)
chr1 (44-112)||(3847182-3847248)
chr1 (44-112)||(8550848-8550914)
chr1 (44-112)||(13316413-13316479)
chr1 (44-112)||(13549061-13549127)
chr1 (44-112)||(13659397-13659463)
chr1 (44-112)||(20762713-20762779)
chr1 (44-127)||(45644415-45644497)
chr1 (44-107)||(193657-193718)
chr1 (44-108)||(4535541-4535604)
[»] scaffold0219 (1 HSPs)
scaffold0219 (60-181)||(27518-27640)
[»] scaffold0014 (1 HSPs)
scaffold0014 (44-112)||(80344-80410)
[»] scaffold0176 (1 HSPs)
scaffold0176 (44-112)||(18065-18130)
[»] scaffold0002 (2 HSPs)
scaffold0002 (44-112)||(434574-434640)
scaffold0002 (44-108)||(490381-490444)
[»] scaffold0053 (1 HSPs)
scaffold0053 (44-104)||(25102-25161)
[»] scaffold0066 (1 HSPs)
scaffold0066 (61-112)||(20491-20542)
[»] scaffold0137 (1 HSPs)
scaffold0137 (142-183)||(10985-11026)
[»] scaffold0016 (1 HSPs)
scaffold0016 (44-112)||(114643-114709)
[»] scaffold0006 (1 HSPs)
scaffold0006 (44-112)||(149158-149224)


Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 40585865 - 40585644
Alignment:
Q  1 aaacaataatctattatggaggagaggtagatccattaaatatactatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttca 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  40585865 aaacaataatctattatggaggataggcagatccattaaatatactatcaatgagttcttttacaaaaagatacaaaaggcttacaaaaaattcgtttca 40585766  T
Q  101 acaagctcacaagaataaaacttaattcttactcatttttcaatctcttcccataaacaaaagactcaatgatttcactcacataaggtattttcaaact 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  40585765 acaagctcacaagaataaaacttaattcttactcatttttcaatttcttctcataaacaagagactcaatgatttcactcacctaaggtattttcaaact 40585666  T
Q  201 ctagaatctacccccaaaagag 222  Q
     |||||||||||||||||||||    
T  40585665 ttagaatctacccccaaaagag 40585644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 11712061 - 11712198
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa-gaataaaacttaattcttactcatttttca 142  Q
    |||||||||||||| ||| ||||| ||||| ||||||||| ||| ||||| |||||||||||||| ||| ||| ||||| |||||  || |  ||| |||    
T  11712061 actatcaatgagttattt-acaaagagatataaaagggtttcaagaaattagcttcaacaagctctcaaggaacaaaacctaatttatattattttctca 11712159  T
Q  143 atctcttcccataaacaaaagactcaatgatttcactca 181  Q
    ||||||||| |  ||||||||||||||||||||||||||    
T  11712160 atctcttccaaagaacaaaagactcaatgatttcactca 11712198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 7597707 - 7597569
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc-acaagaataaaacttaattcttactcatttttcaatctcttcccataaac 158  Q
    |||||||| |||||||||||| ||| || ||||| ||||||||||||||  |||||| ||||| | |||  | ||| |||| |||||||||||||  |||    
T  7597707 tttacaaagagatacaaaaggattataagaaattagcttcaacaagctctccaagaacaaaacctgatttattctctttttccaatctcttcccaagaac 7597608  T
Q  159 aaaagactcaatgatttcactcacataaggtattttcaaa 198  Q
    |||||||||||||| |||||||||  ||||||||| ||||    
T  7597607 aaaagactcaatga-ttcactcactcaaggtatttacaaa 7597569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 4283631 - 4283565
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  4283631 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 4283565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 18655507 - 18655441
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  18655507 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 18655441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 30143447 - 30143381
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  30143447 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 30143381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 42435052 - 42435118
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  42435052 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 42435118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 3231859 - 3231990
Alignment:
Q  47 atcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaattcttactcatttttcaatc 145  Q
    |||||| |||||||| ||||| |||||||||| ||||| |||||||| |||||||||||||||| ||||| ||| | |||||  |||   ||| ||||||    
T  3231859 atcaataagttcttt-acaaagagatacaaaatggttaaaaaaaattagcttcaacaagctcacgaagaacaaagcctaatttctacatttttctcaatc 3231957  T
Q  146 tcttcccataaacaaaagactcaatgatttcac 178  Q
    |||||| |  ||||| ||||||||||| |||||    
T  3231958 tcttcctaagaacaagagactcaatgaattcac 3231990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 1292524 - 1292590
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  1292524 actatcaatgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 1292590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 4731765 - 4731699
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| | ||||||||||||||||    
T  4731765 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattaggttcaacaagctcacaa 4731699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 27811385 - 27811319
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||| ||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  27811385 actatcaatgggttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 27811319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 42498301 - 42498235
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| | ||||||||||||||||| ||||| ||||||||||| ||||||    
T  42498301 actatcaatgagttctt--acaaagaaatacaaaagggttacaagaaattagcttcaacaagttcacaa 42498235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 1822385 - 1822333
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||    
T  1822385 tttacaaatagatataaaagggttacaagaaattagcttcaacaagctcacaa 1822333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 1856830 - 1856778
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||    
T  1856830 tttacaaatagatataaaagggttacaagaaattagcttcaacaagctcacaa 1856778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 12702697 - 12702761
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||| ||| ||||||||||||||| ||||| ||||||||||| ||||||    
T  12702697 tatcaatgagttctt--acaaagagacacaaaagggttacaagaaattagcttcaacaagttcacaa 12702761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 15212891 - 15212827
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  15212891 tatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 15212827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 5689378 - 5689312
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||  ||||||||||||    
T  5689378 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagctttgacaagctcacaa 5689312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 18141927 - 18141861
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  |||||  |||||||| ||||||||| ||||| ||||||||||||||||||    
T  18141927 actatcaaagagttctt--acaaagtgatacaaatgggttacaagaaattagcttcaacaagctcacaa 18141861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 19491760 - 19491826
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| ||||||||| ||||||||| ||||| | ||||||||||||||||    
T  19491760 actatcaacgagttctt--acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaa 19491826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 33352257 - 33352191
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||| ||||| | ||||||||| ||||||    
T  33352257 actatcaatgagttc--ttacaaagagatacaaatgggttacaagaaattaggttcaacaagttcacaa 33352191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 40221852 - 40221786
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| ||||||||| ||||||||| ||||| | ||||||||||||||||    
T  40221852 actatcaacgagttctt--acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaa 40221786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 44353900 - 44353834
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||| ||||||    
T  44353900 actatcaatgagttctt--acaaagagatacaaatgtgttacaagaaattagcttcaacaagttcacaa 44353834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 10240262 - 10240195
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||| ||||| |||| ||| | |||||||| ||||| | ||||||||||||||||    
T  10240262 actatcaatgagttcttt-acaaagagatccaacatggttacaagaaattagattcaacaagctcacaa 10240195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 29796387 - 29796518
Alignment:
Q  50 aatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc-acaagaataaaacttaattcttactcatttttcaatctct 148  Q
    |||||||| ||||||||| || |||||||  ||||||| ||||  ||||||||||| ||  |||||| ||| ||| |||  ||||| |||  ||||||||    
T  29796387 aatgagtttttttacaaataggtacaaaaatgttacaagaaatcagcttcaacaagttctccaagaacaaaccttgatttctactcttttcccaatctct 29796486  T
Q  149 tcccataaacaaaagactcaatgatttcactc 180  Q
    || ||  ||||| ||||||||||| |||||||    
T  29796487 tctcaagaacaagagactcaatgaattcactc 29796518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 1746280 - 1746345
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||   |||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  1746280 actatcaatgagttctt---caaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 1746345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 34256568 - 34256615
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaatt 93  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| |||||    
T  34256568 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaatt 34256615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 1345432 - 1345498
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||||||  |||| ||||||| | ||||||||| ||||| ||||||| || |||||||    
T  1345432 actatcaatgagttcttt--caaagagatacatatgggttacaagaaattagcttcaataaactcacaa 1345498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 3303731 - 3303797
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||| ||||| | || |||||||||||||    
T  3303731 actatcaatgagttctt--acaaagagatacaaatgagttacaagaaattaggttaaacaagctcacaa 3303797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 4162603 - 4162545
Alignment:
Q  45 ctatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaag 105  Q
    ||||||||||||||||  ||||| ||||||||| | ||||||| ||||| |||||||||||    
T  4162603 ctatcaatgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaag 4162545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 6599079 - 6599017
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    |||||||||||||||  ||||||||  ||||||| ||||||||| ||||| |||| |||||||||    
T  6599079 actatcaatgagttc--ttacaaaagtatacaaatgggttacaagaaattagcttaaacaagctc 6599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 6674532 - 6674470
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    |||||||||||||||  ||||||||  ||||||| ||||||||| ||||| |||| |||||||||    
T  6674532 actatcaatgagttc--ttacaaaagtatacaaatgggttacaagaaattagcttaaacaagctc 6674470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 9765852 - 9765786
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||   |||||||||||    
T  9765852 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagctttgccaagctcacaa 9765786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 18106140 - 18106201
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    |||||||||||||||||  |||||| |||||||| | ||||||| ||||| ||||||||||||||    
T  18106140 actatcaatgagttctt--acaaaa-gatacaaatgagttacaagaaattagcttcaacaagctc 18106201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 31218364 - 31218298
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||   |||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  31218364 actatcaatgagttcttc--caaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 31218298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 40321174 - 40321121
Alignment:
Q  59 ttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||| |||||| || ||||||||| |||||  |||||||||||||||||    
T  40321174 ttttacaaagagatactaatgggttacaagaaattaacttcaacaagctcacaa 40321121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 11137136 - 11137073
Alignment:
Q  44 actatcaatgagttctttt--acaaaaagatacaaaagggttacaaaaaattcgcttcaacaag 105  Q
    |||||||||||||| ||||  ||||| |||||||||| ||||| || ||||| |||||||||||    
T  11137136 actatcaatgagtttttttttacaaagagatacaaaacggttataagaaattagcttcaacaag 11137073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 30291699 - 30291611
Alignment:
Q  61 ttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaattcttactcatttt-tcaatctc 147  Q
    |||||||  |||||||| | ||||||| ||||| |||||||||||||||| ||||| ||||| |||||  ||| |||||| ||||||||    
T  30291699 ttacaaagtgatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttctacccattttctcaatctc 30291611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 25073676 - 25073539
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaattcttactcatttttca 142  Q
    |||||||||||||||||| ||| | ||||||||||||||||||| ||| | |||| ||||||||||| ||||||||| | |||||  |||   |||||||    
T  25073676 actatcaatgagttcttt-acatagagatacaaaagggttacaataaaatagctttaacaagctcacgaagaataaatc-taatttctaccattttttca 25073579  T
Q  143 atctcttcccataaacaaaagactcaatgatttcactcac 182  Q
    ||||| |||||| ||||| | |||||||||||||||||||    
T  25073578 atctcctcccatgaacaagatactcaatgatttcactcac 25073539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 2973000 - 2973066
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  2973000 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 2973066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 17758130 - 17758064
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  17758130 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 17758064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 21589038 - 21588972
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  21589038 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 21588972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 21593771 - 21593705
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  21593771 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 21593705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 5043776 - 5043668
Alignment:
Q  2 aacaataatctattatggaggagaggtagatccattaaatatactatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaa 101  Q
    |||||| | ||| |||||||||||| | ||||  |  ||| ||||||||||||||||||  ||||| ||||||||| | ||||||| ||||| |||||||    
T  5043776 aacaatgacctactatggaggagagattgatctctccaatctactatcaatgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaa 5043679  T
Q  102 caagctcacaa 112  Q
    |||||||||||    
T  5043678 caagctcacaa 5043668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 603149 - 603215
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  603149 actatcaacgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 603215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 17763097 - 17763031
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||   |||||||||||||| | ||||||| ||||| ||||||||||||||||||    
T  17763097 actatcaatgagttcttc--caaaaagatacaaatgagttacaagaaattagcttcaacaagctcacaa 17763031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 26830184 - 26830250
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| || |||||| ||||| ||||||||||||||||||    
T  26830184 actatcaatgagttctt--acaaagagatacaaatggattacaagaaattagcttcaacaagctcacaa 26830250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 3808769 - 3808836
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaa-gggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| |||||||||| ||||||||| ||||| | ||||||||||||||||    
T  3808769 actatcaatgagttctt--acaaagagatacaaaatgggttacaagaaattagtttcaacaagctcacaa 3808836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 5406261 - 5406327
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  5406261 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 5406327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 5410586 - 5410652
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  5410586 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 5410652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 9183092 - 9183150
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaa 104  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||| ||||| ||||||||||    
T  9183092 actatcaatgagttc--ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 9183150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 26954347 - 26954413
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||| | | ||||||| ||||| ||||||||||||||||||    
T  26954347 actatcaatgagttctt--acaaagagatacagatgagttacaagaaattagcttcaacaagctcacaa 26954413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 28137469 - 28137535
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| | ||||||| ||||||||| ||||| |||| |||||||||||||    
T  28137469 actatcaatgagttctt--acaaagaaatacaaatgggttacaagaaattagcttaaacaagctcacaa 28137535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 31404736 - 31404802
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  31404736 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 31404802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 2908566 - 2908503
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    |||||||||||||||||| |||| |||||||||||| |||  ||||||||  |||||||||||||    
T  2908566 actatcaatgagttcttt-acaataagatacaaaagagttgtaaaaaattatcttcaacaagctc 2908503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 5413455 - 5413507
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgctt 98  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||    
T  5413455 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagctt 5413507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 4045531 - 4045467
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctca 109  Q
    |||||||||||||| ||| ||||| ||||| |||| | |||||| ||||| |||||||||||||||    
T  4045531 actatcaatgagttattt-acaaagagatataaaatgattacaagaaattagcttcaacaagctca 4045467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 30834597 - 30834663
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||   |||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  30834597 actatcaatgagttcttc--caaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 30834663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 181
Target Start/End: Complemental strand, 30802934 - 30802801
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaagaataaaacttaattcttactcatttttcaatc 145  Q
    |||||| ||||||||| ||||| |||||||||||| |||||| ||||| | ||||||||||||||||  |  |||| |||||| ||| ||||||||||||    
T  30802934 tatcaacgagttcttt-acaaatagatacaaaaggattacaataaattagtttcaacaagctcacaaagaacaaacctaattc-tacccatttttcaatc 30802837  T
Q  146 tcttcccataaacaaaagactcaatgatttcactca 181  Q
    ||||| ||| || || ||||| ||||||||||||||    
T  30802836 tcttctcatgaataagagactaaatgatttcactca 30802801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 35616277 - 35616140
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaattcttactcatttttca 142  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| |||||  ||| ||| ||||| | ||||| ||| || | |||| |||||||| |||    
T  35616277 actatcaatgagttcttt-acaaagaaatacaaaagggttacaagaaattaacttaaacgagctctccaagaacaaacctaatttct-actcatttctca 35616180  T
Q  143 atctcttcccataaacaaaagactcaatgatttcactcac 182  Q
    |||||||||| | ||||| |||||||||||||||||||||    
T  35616179 atctcttcccgtgaacaagagactcaatgatttcactcac 35616140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 316868 - 316733
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc-acaagaataaaacttaattcttactcatttttcaat 144  Q
    |||||||||||||||| ||||| |||||||||||| |||||| ||||| ||||||||||||||  ||||||  |||| |||||  |||   ||| |||||    
T  316868 tatcaatgagttcttt-acaaagagatacaaaaggattacaagaaattagcttcaacaagctctccaagaa-caaacctaatttctacctttttctcaat 316771  T
Q  145 ctcttcccataaacaaaagactcaatgatttcactcac 182  Q
    || ||||| ||||||| |||| ||||||||||||||||    
T  316770 cttttcccctaaacaagagacccaatgatttcactcac 316733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 533876 - 533810
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||||||||| ||||||||||||||||||    
T  533876 actatcaatgagttctt--acaaagagatacaaatgggttacaaaaaattagcttcaacaagctcacaa 533810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 538133 - 538066
Alignment:
Q  43 tactatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  538133 tactatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 538066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 28278423 - 28278357
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||  |||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  28278423 actatcaatgagtt--tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 28278357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 13695751 - 13695818
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||| |||||||||||| ||||| ||||||||||||||||||| ||||| |||| |||||||||||||    
T  13695751 actattaatgagttcttt-acaaagagatacaaaagggttacaagaaattagctttaacaagctcacaa 13695818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 213572 - 213506
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| |||| |||||||||||||    
T  213572 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagctttaacaagctcacaa 213506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 9049407 - 9049469
Alignment:
Q  48 tcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||  ||||| |||||||||| |||||||| ||||| ||||||||||||||||||    
T  9049407 tcaatgagttctt--acaaagagatacaaaatggttacaagaaattagcttcaacaagctcacaa 9049469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 13239858 - 13239792
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  13239858 actatcaatgagttctt--acaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaa 13239792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 13488310 - 13488244
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  13488310 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 13488244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 33831787 - 33831721
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| |||| |||||||||||||    
T  33831787 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttaaacaagctcacaa 33831721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 39468610 - 39468676
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  39468610 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 39468676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 42309996 - 42310062
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||| |||||||  ||||| ||||||||||| ||||||| ||||| ||||||||||||||||||    
T  42309996 actatcaataagttctt--acaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaa 42310062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 42428491 - 42428557
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  42428491 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 42428557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 8445824 - 8445741
Alignment:
Q  43 tactatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaagaataaaacttaatt 127  Q
    |||||||||| |||||||| | ||| | ||||||||||||||||| ||||| |||||||||| || ||||| || ||||||||||    
T  8445824 tactatcaattagttcttt-ataaagaaatacaaaagggttacaagaaattagcttcaacaaacttacaagtatcaaacttaatt 8445741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 10054872 - 10055009
Alignment:
Q  39 aatatactatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctca-caagaataaaacttaattcttactcatt 137  Q
    |||| ||||||||||||||| || ||||| |||||||||||| ||| || ||||| |||||||||| |||  |||||| ||| | |||||  ||| ||||    
T  10054872 aatacactatcaatgagttcatt-acaaagagatacaaaagg-ttataagaaattagcttcaacaaactcttcaagaacaaa-cataatttctacccatt 10054968  T
Q  138 tttcaatctcttcccataaacaaaagactcaatgatttcac 178  Q
    | |||||||||| | || ||||| |||||||||||||||||    
T  10054969 tctcaatctctttctatgaacaatagactcaatgatttcac 10055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 30682983 - 30683051
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||  | ||||||| | ||||||||||||||||| ||||| ||||||||||| ||||||    
T  30682983 actatcaatgagtattcttacaaagaaatacaaaagggttacaagaaattagcttcaacaagttcacaa 30683051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 38747111 - 38747046
Alignment:
Q  45 ctatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||  ||| |||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  38747111 ctatcaatgagtt--tttccaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 38747046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 40147368 - 40147304
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac 110  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||||||||    
T  40147368 actatcaatgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagctcac 40147304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 16452187 - 16452124
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctca 109  Q
    ||||| |||||||||||  ||||| ||||||||| ||||||||| ||||| |||||||||||||||    
T  16452187 actatgaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctca 16452124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 25412867 - 25412801
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  25412867 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 25412801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 33906090 - 33906154
Alignment:
Q  43 tactatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||| || || ||||| ||||||||    
T  33906090 tactatcaatgagttcttt-acaaagagatacaaaaggattacaagaagttagcttcgacaagctc 33906154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 5058152 - 5058087
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcaca 111  Q
    |||||||||||||||||  ||||| ||||||||| ||| ||||| ||| | |||||||||||||||||    
T  5058152 actatcaatgagttctt--acaaagagatacaaatgggatacaagaaaatagcttcaacaagctcaca 5058087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 32583343 - 32583402
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaa 104  Q
    |||||||||||||||||| ||||||||||||||||| | |||| | |||| ||||||||||    
T  32583343 actatcaatgagttcttt-acaaaaagatacaaaagagatacacataattagcttcaacaa 32583402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 3075734 - 3075785
Alignment:
Q  61 ttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||||| ||||||||| ||||| | |||| |||||||||||    
T  3075734 ttacaaaaagatacaaatgggttacaagaaattagattcagcaagctcacaa 3075785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 3326018 - 3325958
Alignment:
Q  47 atcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    |||| |||||||||| ||||| ||||||| || |||||||| ||||| ||||||||||||||    
T  3326018 atcattgagttcttt-acaaagagatacacaatggttacaagaaattagcttcaacaagctc 3325958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 8566007 - 8566073
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||| |  |||||||| ||||||||| ||||| |||| |||||||||||||    
T  8566007 actatcaatgagttctt--acagagggatacaaatgggttacaagaaattagcttaaacaagctcacaa 8566073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 28750716 - 28750774
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaa 104  Q
    |||||||||||||||||  ||||||||||||||| ||||||||  |||||  |||||||||    
T  28750716 actatcaatgagttctt--acaaaaagatacaaatgggttacaggaaattaacttcaacaa 28750774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 30793139 - 30793098
Alignment:
Q  141 caatctcttcccataaacaaaagactcaatgatttcactcac 182  Q
    |||||||||||||| ||||||||| | |||||||||||||||    
T  30793139 caatctcttcccatgaacaaaagaataaatgatttcactcac 30793098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 42426296 - 42426354
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaa 104  Q
    |||||||||||||||  ||||||| ||||||||| ||||| ||| ||||| ||||||||||    
T  42426296 actatcaatgagttc--ttacaaagagatacaaatgggttgcaagaaattagcttcaacaa 42426354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 24398163 - 24398098
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  24398163 tatcaatgagttcttt-acaaagagatacaaaagggttacaagaaattagcttcaacaagctcacaa 24398098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 147
Target Start/End: Complemental strand, 26353291 - 26353189
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaattcttactcatttttca 142  Q
    ||||||||||||| |||  ||||||||||||||||| ||||||| ||||| |||||||||| ||||| ||||| ||| |||||||  ||| | |||||||    
T  26353291 actatcaatgagtactt--acaaaaagatacaaaagtgttacaagaaattagcttcaacaaactcacaaagaacaaaccttaatttctacacttttttca 26353194  T
Q  143 atctc 147  Q
    |||||    
T  26353193 atctc 26353189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 7597074 - 7597217
Alignment:
Q  47 atcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa-gaataaaacttaattcttactcatttttcaatc 145  Q
    ||||||||||||||| |||||||||||||||||  |||||| ||||| | ||| ||||| ||| || ||| ||||| |||||  || |||||| ||||||    
T  7597074 atcaatgagttcttt-acaaaaagatacaaaagacttacaagaaattagtttcgacaagttcataaggaacaaaacctaatttctattcatttctcaatc 7597172  T
Q  146 tcttcccataaacaaaagactcaatga-tttcactcacataaggt 189  Q
    ||||||||| ||||| | ||| | ||| |||||||||| ||||||    
T  7597173 tcttcccatgaacaagacactgagtgattttcactcacctaaggt 7597217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 11049694 - 11049594
Alignment:
Q  11 ctattatggaggagaggtagatccattaaatatactatcaatgagttcttttacaaaaagatac-aaaagggttacaaaaaattcgcttcaacaagctca 109  Q
    |||||||| ||||||| | ||||  || ||| ||||||||||||||||||  ||||| |||||| |||||||||| || ||||| |||||||||||||||    
T  11049694 ctattatgaaggagagattgatcttttcaatctactatcaatgagttctt--acaaagagatactaaaagggttataagaaattagcttcaacaagctca 11049597  T
Q  110 caa 112  Q
    |||    
T  11049596 caa 11049594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 33648278 - 33648212
Alignment:
Q  45 ctatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||||| ||||| | ||||||||||||||||  ||||| ||||||||||||||||||    
T  33648278 ctatcaatgagttcttt-acaaagaaatacaaaagggttacaggaaattagcttcaacaagctcacaa 33648212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 17490209 - 17490284
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaa 120  Q
    |||||||||||||||||  ||||| || |||||||| ||||||| ||||| |||||||||||||||| ||||||||||    
T  17490209 actatcaatgagttctt--acaaagagttacaaaagagttacaagaaattagcttcaacaagctcacaaagaataaaa 17490284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 1631793 - 1631859
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| | ||| ||||||||||||||||||    
T  1631793 actatcaatgagttctt--acaaagagatacaaatgggttacaagatattagcttcaacaagctcacaa 1631859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 33162511 - 33162577
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||| | ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  33162511 actatcaatgagttctt--acagagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 33162577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 36318070 - 36318136
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| | ||||||||||||||||    
T  36318070 actatcaatgagttctt--acaaagagatacaaatgggttacaataaattagtttcaacaagctcacaa 36318136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 45727036 - 45726970
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| |||||||||  |||||||| ||||| ||||||||||||||||||    
T  45727036 actatcaatgagttctt--acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaa 45726970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 17057430 - 17057491
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagct 107  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||||||||| |||||||||||||    
T  17057430 actatcaatgagttctt--acaaagagatacaaatgagttacaaaaaattagcttcaacaagct 17057491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 17085413 - 17085474
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagct 107  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||||||||| |||||||||||||    
T  17085413 actatcaatgagttctt--acaaagagatacaaatgagttacaaaaaattagcttcaacaagct 17085474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 42019931 - 42020070
Alignment:
Q  44 actatcaatgagttctttt-acaaaaagatacaaaagggttacaaaaaattcgcttcaacaagc-tcacaagaataaaacttaattcttactcatttttc 141  Q
    |||||||||||||| |||| ||||| ||||||||||| ||||||| ||||| ||||| |||||| | | ||||| |||  | ||||| ||| | ||||      
T  42019931 actatcaatgagttttttttacaaagagatacaaaagagttacaagaaattagcttctacaagctttataagaacaaacataaattc-taccctttttct 42020029  T
Q  142 aatctcttcccataaacaaaagactcaatgatttcactcac 182  Q
    ||||||||||||  || || |||||||||||||||||||||    
T  42020030 aatctcttcccaagaaaaatagactcaatgatttcactcac 42020070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 723805 - 723871
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  |||||||| ||||||||| ||||| |||| |||||||||||||    
T  723805 actatcaatgagttctt--acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaa 723871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 2334479 - 2334545
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||| ||||| | ||||| ||||||||||| ||||||    
T  2334479 actatcaatgagttctt--acaaagagatacaaaagagttactagaaattagcttcaacaagttcacaa 2334545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 6595067 - 6595133
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| |||| |||||||||||||| ||||| ||||||||||| ||||||    
T  6595067 actatcaacgagttctt--acaaagagattcaaaagggttacaagaaattagcttcaacaagttcacaa 6595133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 176
Target Start/End: Original strand, 30218120 - 30218236
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaattcttactcatttttcaatctcttcccataaac 158  Q
    |||||||| |||||||||| |||||||| ||||| ||||||| |||||| | ||||| ||| || | |||| || ||||| |||||||| | |||| |||    
T  30218120 tttacaaagagatacaaaatggttacaagaaattagcttcaataagctctccaagaacaaacctaacttct-acccatttctcaatctccttccatgaac 30218218  T
Q  159 aaaagactcaatgatttc 176  Q
    || | |||||||||||||    
T  30218219 aagacactcaatgatttc 30218236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 35446945 - 35447011
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||| ||||| | ||||||||| ||||||    
T  35446945 actatcaatgagttc--ttacaaagagatacaaatgggttacaagaaattagattcaacaagatcacaa 35447011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 36773669 - 36773603
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  36773669 actatcaaagagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 36773603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 42362459 - 42362393
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  |||||||| ||||||||| ||||| |||| |||||||||||||    
T  42362459 actatcaatgagttctt--acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaa 42362393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 7815334 - 7815395
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagct 107  Q
    ||||| |||||||||||  ||||| ||||||||||| ||||||| ||||| |||||||||||||    
T  7815334 actataaatgagttctt--acaaagagatacaaaagagttacaagaaattagcttcaacaagct 7815395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 34811282 - 34811345
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    |||||||||||||| | ||||||| ||||| ||||| ||||||| ||||| ||||||||||||||    
T  34811282 actatcaatgagtt-tcttacaaagagatataaaagagttacaataaattagcttcaacaagctc 34811345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 42261546 - 42261609
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    ||||||||||||| |||| ||||| | ||||||||| ||||||| ||||| ||||||||||||||    
T  42261546 actatcaatgagtacttt-acaaagatatacaaaagagttacaagaaattagcttcaacaagctc 42261609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 42288186 - 42288237
Alignment:
Q  61 ttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||| | ||||||| ||||||||| ||||| ||||||||||||||||||    
T  42288186 ttacaaagaaatacaaatgggttacaataaattagcttcaacaagctcacaa 42288237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 3897094 - 3897041
Alignment:
Q  48 tcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaac 102  Q
    |||||||||||||| ||||||  ||||||||| ||||||||||||| ||||||||    
T  3897094 tcaatgagttcttt-acaaaattatacaaaagagttacaaaaaattagcttcaac 3897041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 4484391 - 4484458
Alignment:
Q  44 actatcaatgagttcttttacaaaa-agatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  4484391 actatcaatgagttctt--acaaaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 4484458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 5868473 - 5868419
Alignment:
Q  130 tactcatttttcaatctcttcccataaacaaaagactcaatga-tttcactcaca 183  Q
    ||||||||| ||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  5868473 tactcatttctcagtctcttcccttaaacaagagactcaatgattttcactcaca 5868419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 5723317 - 5723383
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||||| |||||||||| |||||||| ||||| ||||  ||||| ||||||    
T  5723317 actatcaatgagttc--ttacaaagagatacaaaaaggttacaagaaattagctttgacaagttcacaa 5723383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 36988137 - 36988202
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcaca 111  Q
    |||||||||||||||||  ||||| ||||||||||| ||||||| ||||| | ||  |||||||||||    
T  36988137 actatcaatgagttctt--acaaagagatacaaaagagttacaagaaattagttttgacaagctcaca 36988202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 41446232 - 41446184
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    |||| ||| |||||||||||||||||  |||||| ||||||||||||||    
T  41446232 tttataaagagatacaaaagggttacttaaaattagcttcaacaagctc 41446184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 41454342 - 41454279
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    |||||||||||||||||| ||||| | ||||||||| ||| | | ||||| ||||||||||||||    
T  41454342 actatcaatgagttcttt-acaaatatatacaaaagagttgctagaaattagcttcaacaagctc 41454279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 53345319 - 53345195
Alignment:
Q  50 aatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaattcttactcatttt-tcaatctc 147  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||| | |||||||||||||| |||||| || |||||||  || ||||||| ||||||||    
T  53345319 aatgagttcttt-acaaaaagatataaaagggttacaagaaattagtttcaacaagctcacaaagaatcaaccttaatttcta-tcattttctcaatctc 53345222  T
Q  148 ttcccataaacaaaagactcaatgattt 175  Q
     ||| |||||||| | ||||||||||||    
T  53345221 -tccgataaacaagacactcaatgattt 53345195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 4588066 - 4588000
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||||||||||| ||||    
T  4588066 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagcttcaacaagcttacaa 4588000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 27417026 - 27417092
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||  |||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  27417026 actatcaatgagtt--tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 27417092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 50262762 - 50262828
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  50262762 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 50262828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 54883127 - 54883061
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  54883127 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 54883061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 56178698 - 56178764
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||||||||| ||||||    
T  56178698 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagcttcaacaagttcacaa 56178764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 5429786 - 5429713
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataa 118  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| |||||||||||||||| ||||||||    
T  5429786 actatcaatgagttctt--acaaatagatacaaatgggttacaagaaattagcttcaacaagctcacgaagaataa 5429713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 22882811 - 22882941
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc-acaagaataaaacttaattcttactcatttttca 142  Q
    |||| ||||||||||||| || || ||||||||||||||||||| ||||| |||||||||| |||  ||||||  |||| ||||| |||  |||||||||    
T  22882811 actaccaatgagttcttt-acgaagagatacaaaagggttacaagaaattagcttcaacaaactctccaagaa-caaacctaatttttatccatttttca 22882908  T
Q  143 atctcttcccataaacaaaagactcaatgattt 175  Q
    ||||||| |||| |||||   ||||||||||||    
T  22882909 atctctttccatgaacaaggcactcaatgattt 22882941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 22934475 - 22934605
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc-acaagaataaaacttaattcttactcatttttca 142  Q
    |||| ||||||||||||| || || ||||||||||||||||||| ||||| |||||||||| |||  ||||||  |||| ||||| |||  |||||||||    
T  22934475 actaccaatgagttcttt-acgaagagatacaaaagggttacaagaaattagcttcaacaaactctccaagaa-caaacctaatttttatccatttttca 22934572  T
Q  143 atctcttcccataaacaaaagactcaatgattt 175  Q
    ||||||| |||| |||||   ||||||||||||    
T  22934573 atctctttccatgaacaaggcactcaatgattt 22934605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 33089986 - 33089856
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc-acaagaataaaacttaattcttactcatttttca 142  Q
    |||||||||||||||||| ||| | |||||||||| ||||| || ||||| ||||||||||||||  ||||||  |||| |||||  || |||| | |||    
T  33089986 actatcaatgagttcttt-acagagagatacaaaatggttataataaattagcttcaacaagctctccaagaa-caaacataatttctattcatctctca 33089889  T
Q  143 atctcttcccataaacaaaagactcaatgattt 175  Q
    |||||||||||| ||||| | ||||||||||||    
T  33089888 atctcttcccatgaacaagacactcaatgattt 33089856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 6677562 - 6677440
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc-acaag-aataaaacttaattcttactcatttttcaatctcttcccataaa 157  Q
    |||||||| | ||||||||||||||||| ||||| ||||||||||||||  |||| || ||||| |||||  ||| |||||| |||| ||||||||  ||    
T  6677562 tttacaaagatatacaaaagggttacaagaaattagcttcaacaagctctccaagaaaaaaaacctaatttctac-cattttccaatttcttcccaagaa 6677464  T
Q  158 caaaagactcaatgatttcactca 181  Q
    ||| ||||||||| ||||||||||    
T  6677463 caagagactcaattatttcactca 6677440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 2209821 - 2209754
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaa-gggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| |||||||||| ||||||||| ||||| ||||||||||||||||||    
T  2209821 actatcaatgagttctt--acaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaa 2209754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 21703900 - 21704033
Alignment:
Q  48 tcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaattcttactcatttttcaatct 146  Q
    |||||||||||||| |||||||||||||||| || ||||| ||||   ||||||||||||  | ||||| ||||| |||||  |||   ||| |||||||    
T  21703900 tcaatgagttcttt-acaaaaagatacaaaaagggtacaagaaatcatcttcaacaagctttctaagaacaaaacctaatttctacctttttctcaatct 21703998  T
Q  147 cttcccataaacaaaagactcaatgatttcactca 181  Q
    |||||||  ||||| ||||| ||||||||||||||    
T  21703999 cttcccaagaacaatagacttaatgatttcactca 21704033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 26699509 - 26699570
Alignment:
Q  50 aatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||| ||||| ||||||||||| ||||||| ||||| ||||||||||||||||||    
T  26699509 aatgagttcttt-acaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaa 26699570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 178
Target Start/End: Complemental strand, 34112925 - 34112790
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc-acaagaataaaacttaattcttactcattttt-- 140  Q
    |||||||||||||||||| ||||| |||| |||||||||||||  ||||| ||||||||||||||  | ||||  |||| |||||  ||||  |||||      
T  34112925 actatcaatgagttcttt-acaaagagatgcaaaagggttacatgaaattagcttcaacaagctctcctagaa-caaacataatttctactttttttttc 34112828  T
Q  141 caatctcttcccataaacaaaagactcaatgatttcac 178  Q
    ||||||||||||||  ||||||| ||||||||||||||    
T  34112827 caatctcttcccatgtacaaaaggctcaatgatttcac 34112790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 8665515 - 8665453
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||    
T  8665515 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctc 8665453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 9927519 - 9927585
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  9927519 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 9927585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 12073499 - 12073433
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  12073499 actatcaatgagttctt--acaaagagatacaaatgagttacaataaattagcttcaacaagctcacaa 12073433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 26175697 - 26175763
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| | ||||||||||||||||    
T  26175697 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaa 26175763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 36994631 - 36994565
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  |||||||| ||||||||| ||||| ||||||||||||||||||    
T  36994631 actatcaatgagttctt--acaaagggatacaaatgggttacaagaaattagcttcaacaagctcacaa 36994565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 37740732 - 37740666
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  37740732 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 37740666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 40632552 - 40632486
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| |||||||||  |||||||| ||||| ||||||||||||||||||    
T  40632552 actatcaatgagttctt--acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaa 40632486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 50673908 - 50673974
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  50673908 actatcaatgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 50673974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 54199967 - 54200033
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  54199967 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 54200033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 12119647 - 12119580
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||| |||||||||||| ||||| ||||||||||||||||||| ||||| ||||||| ||| ||||||    
T  12119647 actataaatgagttcttt-acaaagagatacaaaagggttacaagaaattagcttcaaaaagttcacaa 12119580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 36463465 - 36463516
Alignment:
Q  61 ttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  36463465 ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 36463516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 44570427 - 44570539
Alignment:
Q  45 ctatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaagaataaaacttaattcttactcatttttcaat 144  Q
    ||||||||||||||||| ||||| ||||||||||  ||||||| ||||| | |||||||||||| | |  |  |||| |||||  ||| |||||||||||    
T  44570427 ctatcaatgagttcttt-acaaagagatacaaaaatgttacaagaaattagtttcaacaagctctccaacaacaaacataatttctac-catttttcaat 44570524  T
Q  145 ctcttcccataaaca 159  Q
    |||||||||| ||||    
T  44570525 ctcttcccatgaaca 44570539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 48142440 - 48142505
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||| ||||| ||||| | ||||||||||| ||| | ||||||||||||||||||    
T  48142440 tatcaatgagttcttt-acaaagagatatacaagggttacaagaaactagcttcaacaagctcacaa 48142505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 379487 - 379421
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||| |||||||  |||||  |||||||| ||||||||| ||||| ||||||||||||||||||    
T  379487 actatcaattagttctt--acaaagcgatacaaatgggttacaagaaattagcttcaacaagctcacaa 379421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 6656063 - 6655997
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||| ||||||    
T  6656063 actatcaatgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaa 6655997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 24969219 - 24969153
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||| |||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  24969219 actatcaattagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 24969153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 34570475 - 34570541
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||  ||||||||| ||||| ||||||||||| ||||||    
T  34570475 actatcaatgagttctt--acaaagagatacaattgggttacaagaaattagcttcaacaagttcacaa 34570541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 46147452 - 46147518
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  46147452 actatcaaagagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 46147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 48143150 - 48143084
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||||| |   || ||||||||||||||||||| ||||| ||||||||||| ||||||    
T  48143150 actatcaatgagttcttatg--aagagatacaaaagggttacaagaaattagcttcaacaagttcacaa 48143084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 48893699 - 48893765
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  48893699 actatcaaagagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 48893765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 38811322 - 38811386
Alignment:
Q  118 aaacttaattcttactcatttttcaatctcttcccataaacaaaagactcaatgatttcactcac 182  Q
    ||||||||||  ||| ||||| |||||||||| | || ||||| |||||||||||||||||||||    
T  38811322 aaacttaatttgtacccatttctcaatctctttctatgaacaagagactcaatgatttcactcac 38811386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 5370144 - 5370196
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgctt 98  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||    
T  5370144 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagctt 5370196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 41961452 - 41961393
Alignment:
Q  118 aaacttaattcttactcatttttcaatctcttcccataaacaaaagactcaatgatttca 177  Q
    ||||||||||  ||||| |||| |||||||||| ||| ||||| ||||||||||||||||    
T  41961452 aaacttaatttctactctttttccaatctcttctcatgaacaagagactcaatgatttca 41961393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 31474258 - 31474195
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctca 109  Q
    |||||||||||||||  ||||||| ||||||||| | ||||||| ||||| |||||||||| ||||    
T  31474258 actatcaatgagttc--ttacaaagagatacaaatgagttacaagaaattagcttcaacaaactca 31474195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 35662548 - 35662485
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctca 109  Q
    |||||||||||||||  ||||||| ||||||||| | ||||||| ||||| |||||||||| ||||    
T  35662548 actatcaatgagttc--ttacaaagagatacaaatgagttacaagaaattagcttcaacaaactca 35662485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 41964523 - 41964456
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaa-gggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  ||||||||| ||||||||| ||||| |||| |||||||||||||    
T  41964523 actatcaatgagttctt--acaaagggatacaaaatgggttacaataaattagcttaaacaagctcacaa 41964456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 46703608 - 46703541
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaa-gggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||| |||||||||||  ||||| |||||||||| ||||||||| ||||| |||| |||||||||||||    
T  46703608 actataaatgagttctt--acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaa 46703541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 55085442 - 55085492
Alignment:
Q  62 tacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||| ||||||||| || |||||| ||||| ||||||||||||||||||    
T  55085442 tacaaagagatacaaatggtttacaagaaattagcttcaacaagctcacaa 55085492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 3913555 - 3913489
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||||| | ||||||| |||||| || ||||| |||||||||| |||||||    
T  3913555 actatcaatgagttc--ttacaaagatatacaaatgggttaaaagaaattagcttcaacaaactcacaa 3913489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 5207903 - 5207969
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||| | ||||||| ||| ||||| ||||||||||| ||||||    
T  5207903 actatcaatgagttctt--acaaatagatatacaagggttgcaataaattagcttcaacaagttcacaa 5207969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 6542240 - 6542306
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| |||||||||||| | |||| ||||| | ||||||||||||||||    
T  6542240 actatcaacgagttctt--acaaagagatacaaaaggctaacaagaaattagtttcaacaagctcacaa 6542306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 12743986 - 12744052
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||| ||||| ||||  ||||| ||||||    
T  12743986 actatcaatgagttc--ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaa 12744052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 12744108 - 12744174
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||| ||||| ||||  ||||| ||||||    
T  12744108 actatcaatgagttc--ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaa 12744174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 12745375 - 12745441
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||| ||||| ||||  ||||| ||||||    
T  12745375 actatcaatgagttc--ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaa 12745441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 26364343 - 26364277
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||| |||||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||| ||||||    
T  26364343 actattaatgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaa 26364277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 33989937 - 33989893
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaa 104  Q
    |||||||| |||||||||||| |||||| ||||| ||||||||||    
T  33989937 tttacaaagagatacaaaaggattacaagaaattagcttcaacaa 33989893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 34788850 - 34788898
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    |||||||| ||||||||||| ||||||| |||||  |||||||||||||    
T  34788850 tttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 34788898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 181
Target Start/End: Complemental strand, 20937762 - 20937628
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaagaataaaacttaattcttactcatttttcaatc 145  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |||||  ||||||||||||| | | ||  |||| |||||  |||  ||||| | |||    
T  20937762 tatcaatgagttctttt-caaagagatacaaaagggttacaagaaattaacttcaacaagctctccaaaaacaaacataatttctacctattttccgatc 20937664  T
Q  146 tcttcccataaacaaaagactcaatgatttcactca 181  Q
    |||| | || ||||| ||||||||||||| ||||||    
T  20937663 tctttctatgaacaagagactcaatgattgcactca 20937628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 182
Target Start/End: Original strand, 1313867 - 1314003
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaattcttactcatttttcaat 144  Q
    ||||||||||||||||| |||| | |||||||||| || ||| ||||| |||| ||||||||| | ||||| ||||| ||||| |||| | ||| |||||    
T  1313867 tatcaatgagttctttt-caaagatatacaaaaggcttgcaagaaattagctttaacaagctctccaagaacaaaacataatttttacccttttctcaat 1313965  T
Q  145 ctcttcccataaacaaaagactcaatgatttcactcac 182  Q
    |||||| ||  || || ||||||||| |||||||||||    
T  1313966 ctcttctcaagaataagagactcaataatttcactcac 1314003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 54593811 - 54593745
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  54593811 actatcaatgagttctt--acaaagagatacaaatgggttacaataaattagcttcaacaagctcacaa 54593745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 35138766 - 35138896
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctca-caagaataaaacttaattcttactcatttttca 142  Q
    |||||||||||||||||| ||||| ||||||||||| ||| ||| |||||  ||||||||| |||| ||||||  |||| |||||  ||| ||||| |||    
T  35138766 actatcaatgagttcttt-acaaagagatacaaaagagttgcaagaaattaacttcaacaaactcaccaagaa-caaacataatttctacccatttctca 35138863  T
Q  143 atctcttcccataaacaaaagactcaatgattt 175  Q
    ||||||| |||| ||||| | ||||||||||||    
T  35138864 atctctttccatgaacaagacactcaatgattt 35138896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 147
Target Start/End: Complemental strand, 32891211 - 32891108
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaattcttactcatttt-tc 141  Q
    |||||||| ||||||||  ||||| ||||||||| | ||||||| ||||| |||||||||||||||| ||||| |||||||||||  ||| |||||| ||    
T  32891211 actatcaacgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttctacccattttctc 32891114  T
Q  142 aatctc 147  Q
    ||||||    
T  32891113 aatctc 32891108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 49199530 - 49199597
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaa-gggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| |||||||||| ||||||||| ||||| ||||||||||||||||||    
T  49199530 actatcaatgagttctt--acaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaa 49199597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 2020167 - 2020118
Alignment:
Q  134 catttttcaatctcttcccataaacaaaagactcaatgatttcactcaca 183  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||||||||||    
T  2020167 catttctcaatctcttcccataaacaagagactcaatgaattcactcaca 2020118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 7762372 - 7762306
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  7762372 actatcaatgagttctt--acaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaa 7762306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 23198000 - 23198066
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||||||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  23198000 actatcaatgagttctt--acaaaaagatacaaaagggttacaagaaattagctttgacaagttcacaa 23198066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 23200199 - 23200265
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||||||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  23200199 actatcaatgagttctt--acaaaaagatacaaaagggttacaagaaattagctttgacaagttcacaa 23200265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 29810975 - 29810909
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  29810975 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 29810909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 30236232 - 30236166
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| |||||||||  |||||||| ||||| ||||||||||||||||||    
T  30236232 actatcaatgagttctt--acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaa 30236166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 31314552 - 31314486
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||||||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  31314552 actatcaaagagttctt--acaaaaagatacaaatgggttacaagaaattagcttcaacaagatcacaa 31314486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 34491319 - 34491253
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  34491319 actatcaatgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 34491253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 40735490 - 40735424
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| |||||||||  |||||||| ||||| ||||||||||||||||||    
T  40735490 actatcaatgagttctt--acaaagagatacaaactggttacaataaattagcttcaacaagctcacaa 40735424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 46173464 - 46173398
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||| |||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  46173464 actatcaatgaattctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 46173398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 46860581 - 46860515
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||| ||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  46860581 actatcaatgagttatt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 46860515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 3148067 - 3148181
Alignment:
Q  61 ttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctca-caagaataaaacttaattcttactcatttttcaatctcttcccataaaca 159  Q
    ||||||| | |||||| | |||||||| ||||| ||||||||||||||  |||||| ||| || | ||||  | ||||| |||||||||||||| |||||    
T  3148067 ttacaaacaaatacaataaggttacaagaaattagcttcaacaagctcttcaagaagaaacctaatttctatc-catttctcaatctcttcccacaaaca 3148165  T
Q  160 aaagactcaatgattt 175  Q
    ||||||||||| ||||    
T  3148166 aaagactcaattattt 3148181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 5236519 - 5236583
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  5236519 tatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 5236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 9636187 - 9636234
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaatt 93  Q
    |||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  9636187 actatcaatgagttctt--acaaaaagatacaaaagggttacaagaaatt 9636234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 760954 - 760888
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  |||||||| ||||||||| ||||| |||| |||||||||||||    
T  760954 actatcaatgagttctt--acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaa 760888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 4570059 - 4569993
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||||| ||||||||| | ||||||| ||||| ||||||| ||||||||||    
T  4570059 actatcaatgagttc--ttacaaagagatacaaatgagttacaagaaattagcttcaataagctcacaa 4569993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 7764571 - 7764505
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||| ||||||| ||||| |||| |||||| ||||||    
T  7764571 actatcaatgagttctt--acaaagagatacaaaagagttacaagaaattagctttaacaagttcacaa 7764505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 19683950 - 19684016
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  19683950 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 19684016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 22835063 - 22835129
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  |||||||| ||||||||| ||||| |||| |||||||||||||    
T  22835063 actatcaatgagttctt--acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaa 22835129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 37408565 - 37408499
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  37408565 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 37408499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 44331652 - 44331586
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||| |||||||  ||||| ||||||||| || |||||| ||||| ||||||||||||||||||    
T  44331652 actatcaataagttctt--acaaagagatacaaatggcttacaagaaattagcttcaacaagctcacaa 44331586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 45095270 - 45095204
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  45095270 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 45095204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 53921564 - 53921630
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||| |||||||| | ||||||| ||||| |||| |||||||||||||    
T  53921564 actatcaatgagttctt--acaaaatgatacaaatgagttacaagaaattagctttaacaagctcacaa 53921630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 5373325 - 5373277
Alignment:
Q  61 ttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctca 109  Q
    ||||||| ||||| ||||||||||||| ||||| |||||||||||||||    
T  5373325 ttacaaagagatataaaagggttacaataaattagcttcaacaagctca 5373277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 5433951 - 5434003
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||| ||||||||||||| ||||| |||| |||||||||||||    
T  5433951 tttacaaagagatataaaagggttacaagaaattagctttaacaagctcacaa 5434003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 51398921 - 51398857
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac 110  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||| ||||    
T  51398921 actatcaatgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagttcac 51398857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 43401862 - 43401929
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagg-gttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||| |||| | ||||||| ||||| ||||||||||||||||||    
T  43401862 actatcaatgagttctt--acaaagagataaaaaatgcgttacaagaaattagcttcaacaagctcacaa 43401929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 5258205 - 5258271
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||   |||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  5258205 actatcaatgagttcttc--caaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 5258271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 5260384 - 5260450
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||   |||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  5260384 actatcaatgagttcttc--caaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 5260450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 9581389 - 9581323
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  |||||||| |||||| || ||||| |||| |||||||||||||    
T  9581389 actatcaatgagttctt--acaaagggatacaaatgggttaaaagaaattagcttaaacaagctcacaa 9581323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 16499136 - 16499070
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||| ||| |||| |||| ||||| ||||||||||||| ||||    
T  16499136 actatcaatgagttctt--acaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaa 16499070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 29196447 - 29196513
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||| ||| ||||| ||||  ||||||||||||    
T  29196447 actatcaatgagttctt--acaaagagatacaaatgggttccaagaaattagctttgacaagctcacaa 29196513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 29682466 - 29682400
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  |||||||| |||| |||| ||||| |||| |||||||||||||    
T  29682466 actatcaatgagttctt--acaaagggatacaaatgggtgacaagaaattagcttaaacaagctcacaa 29682400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 29813170 - 29813104
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||| |||||||||||  ||||| |||| |||| ||||||||| ||||| ||||||||||| ||||||    
T  29813170 actataaatgagttctt--acaaagagatgcaaatgggttacaagaaattagcttcaacaagttcacaa 29813104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 33191938 - 33191802
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaattcttactcatttttca 142  Q
    ||||||||||||||||||   | ||||| | |||| |||||||| || || |||||||||||||| | ||||| ||||| || ||  ||||  ||| |||    
T  33191938 actatcaatgagttcttt---acaaagacataaaatggttacaagaacttagcttcaacaagctctctaagaacaaaacatagtttctactattttctca 33191842  T
Q  143 atctcttcccataaacaaaagactcaatgatttcactcac 182  Q
    ||||||| |||  ||||| ||||||||| |||||| ||||    
T  33191841 atctcttaccaataacaagagactcaattatttcaatcac 33191802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 40734605 - 40734539
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  |||||||| | ||||||| ||||| | ||||||||||||||||    
T  40734605 actatcaatgagttctt--acaaagggatacaaatgtgttacaagaaattaggttcaacaagctcacaa 40734539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 31105457 - 31105520
Alignment:
Q  47 atcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||  ||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  31105457 atcaatgagttctt--acaaaaagatacaaatgggttacaagaaattagcttcaacaagctcacaa 31105520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 32358115 - 32358181
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  32358115 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 32358181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 36574576 - 36574643
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||| ||||| |||||||||| |||||||    
T  36574576 actatcaatgagttcttt-acaaagagatataaaagggttacaagaaattagcttcaacaaactcacaa 36574643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 178
Target Start/End: Complemental strand, 5116712 - 5116579
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagct-cacaagaataaaacttaattcttactcatttttca 142  Q
    |||||||||||||||||| ||||| |||||||||||| |||||| |||||  ||||||||| ||   ||||||  |||| |||||  ||||| |||   |    
T  5116712 actatcaatgagttcttt-acaaagagatacaaaaggtttacaataaattatcttcaacaaactatccaagaa-caaacctaatttctactcttttccta 5116615  T
Q  143 atctcttcccataaacaaaagactcaatgatttcac 178  Q
    ||||| |||||||||||| |||||||||||||||||    
T  5116614 atctcctcccataaacaagagactcaatgatttcac 5116579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 6360013 - 6360077
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac 110  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||    
T  6360013 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcac 6360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 1113765 - 1113698
Alignment:
Q  43 tactatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||||||  ||||| ||||||||| |||||| || ||||| ||||||||||||||||||    
T  1113765 tactatcaatgagttctt--acaaagagatacaaatgggttataagaaattagcttcaacaagctcacaa 1113698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 2361033 - 2361099
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  2361033 actatcaatgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 2361099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 4586268 - 4586202
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||| ||| ||||||||||||||| ||||||||||| ||||||    
T  4586268 actatcaatgagttctt--acaaagagataaaaatgggttacaaaaaattagcttcaacaagttcacaa 4586202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 6432078 - 6432012
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  6432078 actatcaacgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 6432012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 22270080 - 22270014
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||| |||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  22270080 actatcaatcagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 22270014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 23565122 - 23565188
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||| ||||||| ||||| | ||||||||||||||||    
T  23565122 actatcaatgagttctt--acaaagagatacaaaagagttacaagaaattagtttcaacaagctcacaa 23565188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 27347924 - 27347858
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  27347924 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 27347858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 29608844 - 29608778
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  29608844 actatcaatgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 29608778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 30024793 - 30024859
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  30024793 actatcaaagagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 30024859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 47674004 - 47674070
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  47674004 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 47674070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 48491686 - 48491620
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||||||  |||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  48491686 actatcaatgagttcttt--caaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 48491620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 2390374 - 2390323
Alignment:
Q  61 ttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  2390374 ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 2390323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 23344080 - 23344000
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaatt 127  Q
    ||||||||||||||   ||||| | |||| |||||||||||| ||||| |||||||||||||||| ||||||||| |||||||    
T  23344080 tatcaatgagttctc--acaaagatatactaaagggttacaagaaattagcttcaacaagctcacaaagaataaaccttaatt 23344000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 31733032 - 31733096
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||| ||||||||| ||||||||| ||||| |||||| |||||||||||    
T  31733032 tatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaccaagctcacaa 31733096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 4253591 - 4253656
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||||  |||| ||||| ||||||||||||  ||||| ||||||||||||||||||    
T  4253591 tatcaatgagttctttc-caaagagatataaaagggttacatgaaattagcttcaacaagctcacaa 4253656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 27073909 - 27073788
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa-gaataaaacttaattcttactcatttttcaatctcttcccataaac 158  Q
    |||||||| ||||||||||| ||||||| |||||  |||||| || |||| || ||| ||||| || |||| ||  ||||| |||| ||||||||  |||    
T  27073909 tttacaaagagatacaaaagagttacaagaaattaacttcaataaactcataacgaacaaaacatatttct-accaattttccaatgtcttcccaagaac 27073811  T
Q  159 aaaagactcaatgatttcactca 181  Q
    |||||| ||||||||||||||||    
T  27073810 aaaagattcaatgatttcactca 27073788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 27204404 - 27204525
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa-gaataaaacttaattcttactcatttttcaatctcttcccataaac 158  Q
    |||||||| ||||||||||| ||||||| |||||  |||||| || |||| || ||| ||||| || |||| ||  ||||| |||| ||||||||  |||    
T  27204404 tttacaaagagatacaaaagagttacaagaaattaacttcaataaactcataacgaacaaaacatatttct-accaattttccaatgtcttcccaagaac 27204502  T
Q  159 aaaagactcaatgatttcactca 181  Q
    |||||| ||||||||||||||||    
T  27204503 aaaagattcaatgatttcactca 27204525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 496044 - 496110
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||||| ||  || ||||||||| ||||| ||| ||||| ||||||||||||||||||    
T  496044 actatcaatgagttcttata--aagagatacaaatgggttgcaagaaattagcttcaacaagctcacaa 496110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 18126751 - 18126685
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||| ||||| |||| |||||| ||||||    
T  18126751 actatcaatgagttc--ttacaaagagatacaaatgggttacaagaaattagcttgaacaagttcacaa 18126685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 19502285 - 19502219
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||| ||||||| ||||| ||||  ||||||||||||    
T  19502285 actatcaatgagttctt--acaaagagatacaaaagagttacaagaaattagctttgacaagctcacaa 19502219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 23555147 - 23555081
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| || |||||||| ||||||| ||||| ||||||||||| ||||||    
T  23555147 actatcaatgagttctt--acaaagaggtacaaaagtgttacaagaaattagcttcaacaagttcacaa 23555081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 26417423 - 26417357
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| ||||||||| ||||||||| |||||  |||||||||||||||||    
T  26417423 actatcaacgagttctt--acaaagagatacaaatgggttacaagaaattatcttcaacaagctcacaa 26417357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 34310777 - 34310835
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaa 104  Q
    |||||||||||||||||  ||||||||||||||| | ||||||| ||||| ||||||||||    
T  34310777 actatcaatgagttctt--acaaaaagatacaaatgtgttacaagaaattagcttcaacaa 34310835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 35854021 - 35853955
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  35854021 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 35853955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 36146469 - 36146534
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| |||||||| ||| || ||||||||||||||||||    
T  36146469 actatcaatgagttctt--acaaagagatacaaatgggttacagaaa-ttagcttcaacaagctcacaa 36146534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 22328470 - 22328518
Alignment:
Q  64 caaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||| ||||||||||| ||||||| ||||| ||||||||||||||||||    
T  22328470 caaagagatacaaaagagttacaagaaattagcttcaacaagctcacaa 22328518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 25615960 - 25615895
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcaca 111  Q
    |||||||||||||||  |||||||| |||||||| ||||||||| ||||| |||| ||||||| ||||    
T  25615960 actatcaatgagttc--ttacaaaatgatacaaatgggttacaagaaattagcttaaacaagcgcaca 25615895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 5514111 - 5514173
Alignment:
Q  87 aaaaattcgcttcaacaagctcac-aagaataaaacttaattcttactcatttttcaatctct 148  Q
    ||||||| |||||||||||||||| ||||| ||||| |||||  ||||| |||||||||||||    
T  5514111 aaaaattagcttcaacaagctcacaaagaacaaaacataatttctactcttttttcaatctct 5514173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 8359377 - 8359444
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaa-gggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| |||||||||| ||||||||| ||||| | || |||||||||||||    
T  8359377 actatcaatgagttctt--acaaagagatacaaaatgggttacaagaaattagtttaaacaagctcacaa 8359444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 2759258 - 2759324
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||| ||| | ||||||| ||||| ||||||||||| ||||||    
T  2759258 actatcaatgagttctt--acaaagagatataaatgagttacaagaaattagcttcaacaagttcacaa 2759324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 3259089 - 3259036
Alignment:
Q  59 ttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||| ||||||||| | ||||||| ||||| |||| |||||||||||||    
T  3259089 ttttacaaagagatacaaatgagttacaataaattagcttaaacaagctcacaa 3259036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 4510609 - 4510675
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||| ||| ||||||||| ||||||||| ||||| ||||||| || |||||||    
T  4510609 actatcaatgagttc--ttataaagagatacaaatgggttacaagaaattagcttcaataaactcacaa 4510675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 4512451 - 4512517
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||| ||| ||||||||| ||||||||| ||||| ||||||| || |||||||    
T  4512451 actatcaatgagttc--ttataaagagatacaaatgggttacaagaaattagcttcaataaactcacaa 4512517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 14069894 - 14069960
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||| ||||| ||||  ||||| ||||||    
T  14069894 actatcaatgagttc--ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaa 14069960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 14379922 - 14379988
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  ||||||| ||||||||| ||||||||| ||||| ||||  ||||| ||||||    
T  14379922 actatcaatgagttc--ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaa 14379988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 38671283 - 38671349
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  |||||||| | ||||||| ||||| |||| |||||||||||||    
T  38671283 actatcaatgagttctt--acaaagtgatacaaatgtgttacaataaattagcttaaacaagctcacaa 38671349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 43864338 - 43864285
Alignment:
Q  59 ttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||| ||||||||| ||||||||  ||||| ||||||||||| ||||||    
T  43864338 ttttacaaagagatacaaatgggttacaggaaattagcttcaacaagttcacaa 43864285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 48599395 - 48599461
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||| ||||   |||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  48599395 actatcaatgagctcttc--caaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 48599461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 4178880 - 4178829
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgctt 98  Q
    |||||||||||||||||   |||| ||||||||||||||||||| ||||| ||||    
T  4178880 actatcaatgagttctt---caaagagatacaaaagggttacaagaaattagctt 4178829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 7434 - 7368
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  7434 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 7368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 31925768 - 31925834
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  31925768 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 31925834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 47255401 - 47255467
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  47255401 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 47255467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 22079422 - 22079309
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaagaataaaacttaattcttactcattttt-caat 144  Q
    |||||||||||||||| ||||| |||||||||| |||||||| ||||| |||| |||||||||||||  |  |||| |||||  ||| ||||||| ||||    
T  22079422 tatcaatgagttcttt-acaaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaacataatttctac-catttttccaat 22079325  T
Q  145 ctcttcccataaacaa 160  Q
    |||||||||| |||||    
T  22079324 ctcttcccatgaacaa 22079309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 2263035 - 2263100
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac 110  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||  |||||||||||||||    
T  2263035 actatcaataagttcttt-acaaaaagatataaaagggttacaagaaattatcttcaacaagctcac 2263100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 928050 - 928103
Alignment:
Q  59 ttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||    
T  928050 ttttacaaagagatccaaaagggttacaagaaattagcttcaacaagctcacaa 928103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 3156972 - 3156906
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  3156972 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 3156906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 3189437 - 3189371
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||||||||||||||| ||||||  ||||| ||||||||||| ||||||    
T  3189437 actatcaatgagttctt--acaaaaagatacaaaagagttacaggaaattagcttcaacaagttcacaa 3189371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 3198254 - 3198188
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||||||||||||||| ||||||  ||||| ||||||||||| ||||||    
T  3198254 actatcaatgagttctt--acaaaaagatacaaaagagttacaggaaattagcttcaacaagttcacaa 3198188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 3207093 - 3207027
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||||||||||||||| ||||||  ||||| ||||||||||| ||||||    
T  3207093 actatcaatgagttctt--acaaaaagatacaaaagagttacaggaaattagcttcaacaagttcacaa 3207027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 10925333 - 10925264
Alignment:
Q  44 actatcaatgagttctt-ttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||| ||||| ||||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  10925333 actatcaatgaattcttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 10925264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 11348805 - 11348739
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  | ||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  11348805 actatcaatgagttctt--agaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 11348739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 13547150 - 13547216
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||| | ||||||||||||||||||    
T  13547150 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaaatagcttcaacaagctcacaa 13547216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 19754602 - 19754536
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| |||||||||  |||||||| ||||| ||||||||||||||||||    
T  19754602 actatcaatgagttctt--acaaagagatacaaatcggttacaagaaattagcttcaacaagctcacaa 19754536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 28220287 - 28220353
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  28220287 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 28220353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 28265615 - 28265681
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  28265615 actatcaaagagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 28265681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 31659345 - 31659279
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||| |||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  31659345 actatcaataagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 31659279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 42298036 - 42298102
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  42298036 actatcaatgagttctt--acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 42298102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 49918457 - 49918391
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  49918457 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 49918391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 3460789 - 3460737
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| | ||||||||||||||||| ||||| ||||||||||||||||||    
T  3460789 tttacaaagatatacaaaagggttacaataaattagcttcaacaagctcacaa 3460737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 16455728 - 16455659
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaagaa 115  Q
    |||||||||||||||||  ||| | ||||||||| ||||||||| ||||| |||||||||||||||| ||||    
T  16455728 actatcaatgagttctt--acacagagatacaaatgggttacaagaaattagcttcaacaagctcactagaa 16455659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 4552700 - 4552764
Alignment:
Q  46 tatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||  |||||  |||||||| ||||||||| ||||| ||||||||||||||||||    
T  4552700 tatcaatgagttctt--acaaagggatacaaaggggttacaagaaattagcttcaacaagctcacaa 4552764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 37282758 - 37282820
Alignment:
Q  50 aatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaag 113  Q
    |||||||||||| ||||| |||| |||||||||||| | ||||| |||||||||||||||||||    
T  37282758 aatgagttcttt-acaaagagatgcaaaagggttaccataaattagcttcaacaagctcacaag 37282820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 7482291 - 7482358
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaa-gggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| |||||||||| ||||||||| ||||| |||| |||||||||||||    
T  7482291 actatcaatgagttctt--acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaa 7482358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 16914235 - 16914351
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaa-aaaattcgcttcaacaagctc-acaagaataaaacttaattcttactcatttttc 141  Q
    |||||||||||||||||| ||||| |||||||||||||||| || ||| || ||||||||| ||||  ||||||  |||| ||||| |||| |||||  |    
T  16914235 actatcaatgagttcttt-acaaagagatacaaaagggttagaagaaacttagcttcaacaggctctccaagaa-caaacataatttttacccatttccc 16914332  T
Q  142 aatctcttcccataaacaa 160  Q
    ||||||||||||| |||||    
T  16914333 aatctcttcccatgaacaa 16914351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 28223482 - 28223541
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaag 105  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||| ||||| |||||||||||    
T  28223482 actatcaatgagttctt--acaaagagatacaaatgggttacaagaaattagcttcaacaag 28223541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 37168405 - 37168338
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaa-gggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| |||||||||| ||||||||| ||||| |||| |||||||||||||    
T  37168405 actatcaatgagttctt--acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaa 37168338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 834228 - 834294
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  |||||||| ||||||||| ||||| |||| |||||||||||||    
T  834228 actatcaatgagttctt--acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaa 834294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 13138037 - 13138103
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||| ||||||  ||||| |||| |||| ||||||||| ||||| ||||||||||||||||||    
T  13138037 actatcaatgtgttctt--acaaagagatgcaaatgggttacaagaaattagcttcaacaagctcacaa 13138103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 15820414 - 15820348
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  | ||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  15820414 actatcaatgagttctt--aaaaagagatacaaatgtgttacaagaaattagcttcaacaagctcacaa 15820348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 41361021 - 41360955
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||| ||||||||  ||||| ||||||||| ||||||||| ||||| | ||||||||||||||||    
T  41361021 actatcaacgagttctt--acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaa 41360955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 44455267 - 44455201
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||||||||||||| | ||||||| ||||| | ||||||||| ||||||    
T  44455267 actatcaatgagttctt--acaaaaagatacaaatgagttacaagaaattagtttcaacaagttcacaa 44455201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 50167236 - 50167302
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||  |||||||| ||||||||| ||||||||| ||||| ||||  ||||||||||||    
T  50167236 actatcaatgagtt--tttacaaagagatacaaatgggttacaagaaattagctttgacaagctcacaa 50167302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 6808560 - 6808497
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    ||||| |||||||||||| ||||| ||||||||||| ||||||| || || ||||||||||||||    
T  6808560 actataaatgagttcttt-acaaagagatacaaaagagttacaagaagttagcttcaacaagctc 6808497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 19752792 - 19752731
Alignment:
Q  45 ctatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    ||||||||||||||||  ||||| |||||||||  |||||||| ||||| ||||||||||||||    
T  19752792 ctatcaatgagttctt--acaaagagatacaaatcggttacaagaaattagcttcaacaagctc 19752731  T

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Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 25652194 - 25652064
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaagaataaaacttaattcttactcatttttcaa 143  Q
    |||||||| ||||||||| ||||| |||||||| || ||||||| ||||| |||||||||| ||| |||  |  | ||||||||  |||  |||| ||||    
T  25652194 actatcaaagagttcttt-acaaagagatacaagagagttacaagaaattagcttcaacaaactctcaaataacacacttaatttctaccaatttctcaa 25652096  T
Q  144 tctcttcccataaacaaaagactcaatgattt 175  Q
    | | ||| ||| ||||||| ||||||||||||    
T  25652095 tattttctcatgaacaaaatactcaatgattt 25652064  T

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Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 9109475 - 9109540
Alignment:
Q  39 aatatactatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaag 105  Q
    |||| |||||||| | ||||||| ||||| ||||||||||||||||||| |||||  ||||||||||    
T  9109475 aatacactatcaacgtgttcttt-acaaagagatacaaaagggttacaagaaattaacttcaacaag 9109540  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 29136351 - 29136288
Alignment:
Q  47 atcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||  ||||| | ||||||| ||||| ||| ||||| ||||||||||||||||||    
T  29136351 atcaatgagttctt--acaaagaaatacaaatgggttccaagaaattagcttcaacaagctcacaa 29136288  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 37033133 - 37033200
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaaggg-ttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| |||| ||||| || |||||| ||||| ||||||||||||||||||    
T  37033133 actatcaatgagttctt--acaaagagatgcaaaatggattacaagaaattagcttcaacaagctcacaa 37033200  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 47115266 - 47115212
Alignment:
Q  59 ttttacaaaaagatacaaaa-gggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||| |||||||||| ||||||||| ||||| |||| |||||||||||||    
T  47115266 ttttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaa 47115212  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 3847182 - 3847248
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  |||||||| |||||||||||| || |||| ||||| |||||||    
T  3847182 actatcaatgagttctt--acaaagggatacaaatgggttacaaaaatttagcttaaacaaactcacaa 3847248  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 8550848 - 8550914
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  |||||  |||||||| | ||||||| ||||| |||| |||||||||||||    
T  8550848 actatcaatgagttctt--acaaagggatacaaatgagttacaagaaattagcttaaacaagctcacaa 8550914  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 13316413 - 13316479
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||   |||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  13316413 actatcaatgagttcttc--caaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 13316479  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 13549061 - 13549127
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||  ||||| | || |||||||||||||    
T  13549061 actatcaatgagttctt--acaaagagatacaaatgggttacatgaaattaggtttaacaagctcacaa 13549127  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 13659397 - 13659463
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||| ||| |||| |||| ||||| ||||||||||||| ||||    
T  13659397 actatcaatgagttctt--acaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaa 13659463  T

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Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 20762779 - 20762713
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  || || ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  20762779 actatcaatgagttctt--acgaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 20762713  T

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Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 45644415 - 45644497
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcac-aagaataaaacttaatt 127  Q
    |||||||||||||||||  ||||| ||||||||| | ||| ||| ||||| ||||  |||||||||| ||||| |||||||||||    
T  45644415 actatcaatgagttctt--acaaagagatacaaatgagttgcaagaaattagctttgacaagctcacaaagaacaaaacttaatt 45644497  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 193718 - 193657
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagct 107  Q
    |||||||||||||| ||  ||||| ||||||||| | ||||||| ||||| |||||||||||||    
T  193718 actatcaatgagttatt--acaaagagatacaaatgagttacaagaaattagcttcaacaagct 193657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 4535541 - 4535604
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    ||||||||||||||| |||||||| ||||||||||  ||||||| |||||  |||||| ||||||    
T  4535541 actatcaatgagttc-tttacaaagagatacaaaaatgttacaagaaattgacttcaataagctc 4535604  T

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Target: scaffold0219 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 27518 - 27640
Alignment:
Q  60 tttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc-acaagaataaaacttaattcttactcatttttcaatctcttcccataaac 158  Q
    |||||||| ||||||||| | ||||||| ||||| ||||||||||||||  |||||| || || |||||  ||||| |||  ||||||||||||   |||    
T  27518 tttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcttcaagaacaatacataatttctactcttttcacaatctcttccctagaac 27617  T
Q  159 aaaagactcaatgatttcactca 181  Q
    || |||||||| |||||||||||    
T  27618 aagagactcaaagatttcactca 27640  T

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Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 80344 - 80410
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||| ||||||||||  ||||||||||||||| ||||| ||| ||||| ||||||||||||||||||    
T  80344 actatctatgagttctt--acaaaaagatacaaatgggttgcaagaaattagcttcaacaagctcacaa 80410  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 18065 - 18130
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||||||||||   ||||||| ||||||||| | ||||||| ||||| ||||||||||||||||||    
T  18065 actatcaatgagtt---ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 18130  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 434640 - 434574
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||| ||||  ||||| ||||||    
T  434640 actatcaatgagttctt--acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 434574  T

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Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 490381 - 490444
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctc 108  Q
    ||||||||||||| |||| ||||| | ||||||||| ||||||| ||||| ||||||||||||||    
T  490381 actatcaatgagtacttt-acaaagatatacaaaagagttacaagaaattagcttcaacaagctc 490444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 25161 - 25102
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaa 104  Q
    ||||||||||||||| |||||||| |||||||||| |||||||| |||||  |||||||||    
T  25161 actatcaatgagttc-tttacaaagagatacaaaaaggttacaagaaattaccttcaacaa 25102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 20491 - 20542
Alignment:
Q  61 ttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    ||||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  20491 ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 20542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 11026 - 10985
Alignment:
Q  142 aatctcttcccataaacaaaagactcaatgatttcactcaca 183  Q
    ||||||||||||| | ||| ||||||||||||||||||||||    
T  11026 aatctcttcccatgatcaatagactcaatgatttcactcaca 10985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 114709 - 114643
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||||||||| ||||||| ||||| ||||  ||||| ||||||    
T  114709 actatcaatgagttctt--acaaagagatacaaaagcgttacaagaaattagctttgacaagttcacaa 114643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 149158 - 149224
Alignment:
Q  44 actatcaatgagttcttttacaaaaagatacaaaagggttacaaaaaattcgcttcaacaagctcacaa 112  Q
    |||||||||||||||||  ||||| ||||| ||| |||| |||| ||||| ||||||||||||| ||||    
T  149158 actatcaatgagttctt--acaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaa 149224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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