View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14755_low_1 (Length: 447)
Name: NF14755_low_1
Description: NF14755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14755_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 342; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 17 - 435
Target Start/End: Complemental strand, 30484800 - 30484382
Alignment:
| Q |
17 |
cataactggggacctacaaactgcttctgatactcatgctttcctcttaaaggtacttccaagaagagaaacaattgccactttaaataagatttaacat |
116 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
30484800 |
cataactggggacctacaaactgcttctgatactcatgctttcctcttaaaggtacttccaagaagagaaacaattgccacttcaaataagatttaacat |
30484701 |
T |
|
| Q |
117 |
ttgatttgaaaggatagaaatatgatcaagttaattaatcttcattattagctttcttgtcacaattatacctaagacaaaaatac-nnnnnnnnncttt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
30484700 |
ttgatttgaaaggatagaaatatgatcaagttaattaatcttcattattagctttcttgtcacaattatacctaagacaaaaatacttttttttttcttt |
30484601 |
T |
|
| Q |
216 |
cttgtcagtggtttgagcaatttccagaattccagactaatccattttatgtttctggggagtcttatgctggaatttatgtacccactctagcttttga |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30484600 |
cttgtcagtggtttgagcaatttccagaattccagactaatccattttatgtttctggggagtcttatgctggaatttatgtacccactctagcttttga |
30484501 |
T |
|
| Q |
316 |
aattgctaaaggtaacgatattattaggatgtttgattttannnnnnnnnaaaaaggtaacgatatataattttacattgtactaacatttttctacagc |
415 |
Q |
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||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30484500 |
aattgctaaaggtaacgttattattaggatgtttgattttattttttttt-aaaaggtaacgatatataattttacattgtactaacatttttctacagc |
30484402 |
T |
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| Q |
416 |
atttcttatataaacctttg |
435 |
Q |
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|||||||||||||||||||| |
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| T |
30484401 |
atttcttatataaacctttg |
30484382 |
T |
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