View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14756_high_11 (Length: 218)

Name: NF14756_high_11
Description: NF14756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14756_high_11
NF14756_high_11
[»] chr1 (6 HSPs)
chr1 (12-218)||(18189901-18190107)
chr1 (159-218)||(5898206-5898265)
chr1 (159-218)||(9828115-9828174)
chr1 (161-218)||(1486646-1486703)
chr1 (159-218)||(40917820-40917879)
chr1 (158-218)||(46348322-46348382)
[»] chr8 (9 HSPs)
chr8 (158-218)||(16641908-16641968)
chr8 (159-218)||(8343387-8343446)
chr8 (159-218)||(22652047-22652106)
chr8 (159-218)||(29510233-29510292)
chr8 (158-214)||(12559039-12559095)
chr8 (159-218)||(36450694-36450753)
chr8 (172-218)||(126300-126346)
chr8 (172-218)||(22943302-22943348)
chr8 (159-208)||(40064032-40064081)
[»] chr7 (12 HSPs)
chr7 (159-218)||(21864868-21864927)
chr7 (159-218)||(5409771-5409830)
chr7 (167-215)||(3294252-3294300)
chr7 (22-65)||(12026021-12026065)
chr7 (159-218)||(598268-598327)
chr7 (159-218)||(15680869-15680928)
chr7 (159-218)||(43027404-43027463)
chr7 (160-218)||(32287404-32287462)
chr7 (159-209)||(40131939-40131989)
chr7 (158-218)||(32093953-32094014)
chr7 (159-195)||(3652250-3652286)
chr7 (158-218)||(17852060-17852120)
[»] chr4 (6 HSPs)
chr4 (157-218)||(23292924-23292985)
chr4 (159-218)||(19482739-19482798)
chr4 (160-218)||(3947702-3947760)
chr4 (159-198)||(1074837-1074876)
chr4 (159-218)||(22234819-22234878)
chr4 (172-218)||(49431086-49431132)
[»] chr2 (7 HSPs)
chr2 (158-218)||(18840952-18841012)
chr2 (158-218)||(38117098-38117158)
chr2 (158-216)||(21782743-21782801)
chr2 (159-218)||(19580225-19580284)
chr2 (159-218)||(26769582-26769641)
chr2 (159-218)||(27084329-27084388)
chr2 (161-218)||(2438661-2438718)
[»] chr6 (10 HSPs)
chr6 (159-218)||(8776908-8776967)
chr6 (159-218)||(34595194-34595253)
chr6 (153-218)||(24645541-24645606)
chr6 (158-218)||(28152158-28152218)
chr6 (159-217)||(3209460-3209518)
chr6 (160-218)||(31384990-31385048)
chr6 (160-214)||(31959214-31959268)
chr6 (161-218)||(12696389-12696446)
chr6 (158-218)||(7248429-7248489)
chr6 (162-218)||(32978842-32978898)
[»] scaffold0652 (1 HSPs)
scaffold0652 (160-218)||(403-461)
[»] scaffold0504 (2 HSPs)
scaffold0504 (58-100)||(8500-8542)
scaffold0504 (22-65)||(8452-8496)
[»] chr5 (8 HSPs)
chr5 (159-212)||(14873588-14873641)
chr5 (159-207)||(38464313-38464361)
chr5 (164-218)||(26312829-26312883)
chr5 (158-211)||(35017110-35017163)
chr5 (161-218)||(43001865-43001922)
chr5 (159-215)||(15410377-15410433)
chr5 (158-218)||(16304365-16304425)
chr5 (158-218)||(30098397-30098457)
[»] scaffold0019 (1 HSPs)
scaffold0019 (159-218)||(71796-71855)
[»] scaffold0003 (1 HSPs)
scaffold0003 (159-218)||(241665-241724)
[»] chr3 (9 HSPs)
chr3 (159-218)||(7171561-7171620)
chr3 (159-218)||(27505311-27505370)
chr3 (159-214)||(52369851-52369906)
chr3 (159-218)||(55401135-55401194)
chr3 (172-218)||(4987233-4987279)
chr3 (158-212)||(17005547-17005601)
chr3 (158-212)||(27277779-27277832)
chr3 (158-214)||(21211358-21211414)
chr3 (158-218)||(34185051-34185111)


Alignment Details
Target: chr1 (Bit Score: 158; Significance: 3e-84; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 12 - 218
Target Start/End: Original strand, 18189901 - 18190107
Alignment:
Q  12 aatatgatatcatagcattattatttttgttgttattatttattacgatgcttcaactgaaaatgaagtttgtgttgtattctgtaagtnnnnnnncttc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||       ||||    
T  18189901 aatatgatatcatagcattattatttttgttgttattatttattaagatgcttcaactgaaaatgaagtttgtgttgtattctgtaagtaaaaaaacttc 18190000  T
Q  112 attcggatccagtccaacatatgctgcccaagtgtttgaattggtcactatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtg 211  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||| |||||||||    
T  18190001 atttggatccagtccaacatatgctgcccaagtgtttgaattggtcactatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtg 18190100  T
Q  212 tcgtgtc 218  Q
    | |||||    
T  18190101 ttgtgtc 18190107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 5898206 - 5898265
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||| ||||||  |||| |||||||||||| |||||||||||||||||||||||||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtc 5898265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 9828174 - 9828115
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| |||||||||||| |||||||||||| ||||||||||||||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtc 9828115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 1486646 - 1486703
Alignment:
Q  161 atgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||| |||| |||||||||||  |||||||||||| ||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 1486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 40917879 - 40917820
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||  |||||||||||  |||||||||||| ||||||||||||||||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 40917820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 46348322 - 46348382
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||||  |||| |||||||| ||  ||||| |||||| ||||||||||||||||    
T  46348322 actatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtc 46348382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 16641908 - 16641968
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||| ||||| |||||||||    
T  16641908 actatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtc 16641968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 8343446 - 8343387
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||| |||| | |||||||||  |||||||||||| ||||||||||||||||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 8343387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 22652106 - 22652047
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| |||||||||||| |||||||||||| |||||| |||||||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtc 22652047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 29510233 - 29510292
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| ||||||||||| ||||||||||||| ||||||| ||||||||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtc 29510292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 12559039 - 12559095
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcg 214  Q
    |||| |||||||| |||| ||| ||||||||||||||||| ||| ||||||||||||    
T  12559039 actaagaagcacagacactcctgggattagatgtgtcccgttgtcggacacgtgtcg 12559095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 36450694 - 36450753
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||| |||| |||||||||||  |||||| ||||| ||||||| ||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtc 36450753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 126300 - 126346
Alignment:
Q  172 acacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||| |||||||||||  |||||||||| ||||||||||||||||||    
T  126300 acactcctcggattagccgtgtcccggtattggacacgtgtcgtgtc 126346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 22943302 - 22943348
Alignment:
Q  172 acacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||| |||||||||||  |||||||||||| ||||||||||||||||    
T  22943302 acactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 22943348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 40064081 - 40064032
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacac 208  Q
    ||||| |||||  |||| ||||||||||||||||||||||||| ||||||    
T  40064081 ctatgtagcacggacactcctcggattagatgtgtcccggtgtcggacac 40064032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 21864927 - 21864868
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||| |||| ||||| |||||| |||||||||||| ||||||||||||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtc 21864868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 5409771 - 5409830
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| |||||||||||  |||||||||||| ||||||||||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 5409830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 3294252 - 3294300
Alignment:
Q  167 cacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgt 215  Q
    ||||||||| | |||||||||  ||||||||||||||||||||||||||    
T  3294252 cacatacactcttcggattaggcgtgtcccggtgttggacacgtgtcgt 3294300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 12026065 - 12026021
Alignment:
Q  22 catagcattattattt-ttgttgttattatttattacgatgcttc 65  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||    
T  12026065 catagcattattatttgttgttgttattatttattaagatgcttc 12026021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 598327 - 598268
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  ||||  ||||||||||  |||||||||||| ||||||||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 598268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 15680928 - 15680869
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| ||||| |||||| ||||| |||||| ||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtc 15680869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 43027404 - 43027463
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| | |||||||||  |||||||||||| ||||||||||||||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 43027463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 32287404 - 32287462
Alignment:
Q  160 tatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||  |||| ||||||||||| ||||||||||||| |||||| |||| ||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtc 32287462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 40131939 - 40131989
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacg 209  Q
    |||||||||||| |||| |||||||||||| ||||||| |||| |||||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacacg 40131989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 32093953 - 32094014
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtccc-ggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||||  |||| |||||||||||  ||||||| ||||| ||||||||||||||||    
T  32093953 actatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtc 32094014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 3652250 - 3652286
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcc 195  Q
    |||||||||||||| |||||||||||||| |||||||    
T  3652250 ctatgaagcacatatacccctcggattaggtgtgtcc 3652286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 17852120 - 17852060
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||||  |||| ||||| ||||| |||||| |||||| ||||||||||| ||||    
T  17852120 actatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtc 17852060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 23292924 - 23292985
Alignment:
Q  157 cactatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||||  |||| |||||||||||  |||||||||||| ||||||||||||||||    
T  23292924 cactatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 23292985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 19482798 - 19482739
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| ||||||||||| |||||||| |||| ||||||||||||||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtc 19482739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 3947702 - 3947760
Alignment:
Q  160 tatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||  |||| ||||||||||| ||||||| ||||| ||||||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtc 3947760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 1074876 - 1074837
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccgg 198  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  1074876 ctatgaagcacatacactcctcagattagatgtgtcccgg 1074837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 22234819 - 22234878
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  ||||  |||||||||| ||||||| ||||| ||||||||||||||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtc 22234878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 49431132 - 49431086
Alignment:
Q  172 acacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||| |||||||| ||  |||||||||||||||||||||||||||||    
T  49431132 acactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtc 49431086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 18840952 - 18841012
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||||  |||| ||||||||||| ||||||||||||| ||||| ||||||||||    
T  18840952 actatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtc 18841012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 38117098 - 38117158
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||||  ||||||||||||||||  |||||||||||| |||||||||| |||||    
T  38117098 actatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtc 38117158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 21782743 - 21782801
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtg 216  Q
    ||||||||||||  |||| || | ||||||| |||||||||||||||||||||||||||    
T  21782743 actatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtg 21782801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 19580225 - 19580284
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||| |||| | |||||||||||||||   |||||||||||||||| |||||    
T  19580225 ctatgaagcacagacactcttcggattagatgtgttttggtgttggacacgtgttgtgtc 19580284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 26769641 - 26769582
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| |||||||||||  ||||||| |||| ||||||||||||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtc 26769582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 27084388 - 27084329
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||| | |||| |||| ||||||  ||||| |||||||||||||||||||||||    
T  27084388 ctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtc 27084329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 2438661 - 2438718
Alignment:
Q  161 atgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||  |||| |||||||||||  |||||||||||| ||||| ||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtc 2438718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 8776908 - 8776967
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| ||||||||||| |||||| |||||| ||||||||||||||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 34595253 - 34595194
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| ||||||||||| |||||||||||||  |||||||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtc 34595194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 24645606 - 24645541
Alignment:
Q  153 tggtcactatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||| ||||||||||||| |||| | |||||||||| |||||  ||||| ||||||||||||||||    
T  24645606 tggtaactatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtc 24645541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 28152218 - 28152158
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||||  |||| |||||||||||   ||||||||||| ||||||||||||||||    
T  28152218 actatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtc 28152158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 3209518 - 3209460
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgt 217  Q
    |||||||||||| |||| |||||||||||  |||||| ||||| |||| ||||||||||    
T  3209518 ctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgt 3209460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 31385048 - 31384990
Alignment:
Q  160 tatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||  |||| ||| |||||||  |||||||||||| ||||||||||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtc 31384990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 31959268 - 31959214
Alignment:
Q  160 tatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcg 214  Q
    ||||||||||  |||| ||||||||||| ||||||||||||| |||||| |||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcg 31959214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 12696446 - 12696389
Alignment:
Q  161 atgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||| |||| ||| |||| || |||||||||||||  |||||||||||||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtc 12696389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 7248489 - 7248429
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||||  |||| ||||||||| || |||||||||||| |||||| ||| |||||    
T  7248489 actatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtc 7248429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 32978842 - 32978898
Alignment:
Q  162 tgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||  |||| ||| |||||||| |||||||||||| ||||| ||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtc 32978898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 403 - 461
Alignment:
Q  160 tatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||  |||| ||||||||||| ||||||||||||| ||||||| ||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtc 461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 8500 - 8542
Alignment:
Q  58 gatgcttcaactgaaaatgaagtttgtgttgtattctgtaagt 100  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  8500 gatgcttcaactgaaaatgaagtttgtgtcatattctgtaagt 8542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 8452 - 8496
Alignment:
Q  22 catagcattattatttt-tgttgttattatttattacgatgcttc 65  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||    
T  8452 catagcattattgttttttgttgttattatttattaagatgcttc 8496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 14873641 - 14873588
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgt 212  Q
    |||||||||||  |||| |||||||||||  |||||||||||||||||||||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgt 14873588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 38464313 - 38464361
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggaca 207  Q
    |||||||||||| |||| ||||||||||| ||||||||||||| |||||    
T  38464313 ctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 26312883 - 26312829
Alignment:
Q  164 aagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||| ||||||||||| ||||||| |||||  ||||||| |||||||    
T  26312883 aagcacatacactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtc 26312829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 35017163 - 35017110
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtg 211  Q
    ||||||||||||  |||| |||||||||||  |||||||| |||||||||||||    
T  35017163 actatgaagcacggacactcctcggattaggcgtgtcccgatgttggacacgtg 35017110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 43001922 - 43001865
Alignment:
Q  161 atgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||  |||| |||||||||||  |||||| |||||| |||||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtc 43001865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 15410377 - 15410433
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgt 215  Q
    |||| ||||||  |||| |||||| ||||| ||||||||||||||||||| ||||||    
T  15410377 ctattaagcacgaacactcctcggcttagacgtgtcccggtgttggacacttgtcgt 15410433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 16304365 - 16304425
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||||  |||  |||||||||||| ||||| |||||| || |||||||||||||    
T  16304365 actatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtc 16304425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 30098457 - 30098397
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||||  |||  ||||||||||| ||||||| |||||  |||||||||||||||    
T  30098457 actatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtc 30098397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 71855 - 71796
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| |||||||||||  |||||||||||| |||||||||| |||||    
T  71855 ctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtc 71796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 241724 - 241665
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  ||||  ||||||||||  |||||||||||| ||||||||||||||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 241665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000005; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 7171620 - 7171561
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||| |||||| ||| |||||||  ||||| |||||| ||||||||||||||||    
T  7171620 ctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtc 7171561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 27505370 - 27505311
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| |||||||||||   ||||||||||| ||||||||||||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtc 27505311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 52369906 - 52369851
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcg 214  Q
    |||||||||||  |||| ||||||| ||| ||||||||||||||||||||| ||||    
T  52369906 ctatgaagcacggacactcctcggaataggtgtgtcccggtgttggacacgcgtcg 52369851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 55401194 - 55401135
Alignment:
Q  159 ctatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||||||||||  |||| |||||||||||  ||||| |||||| ||||||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtc 55401135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 4987233 - 4987279
Alignment:
Q  172 acacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    |||| |||||||||||  |||||||||||| ||||||||||||||||    
T  4987233 acactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 4987279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 17005547 - 17005601
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgt 212  Q
    ||||||||||||| |||| |||||||||||| |||||| |||||  |||||||||    
T  17005547 actatgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgt 17005601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 27277779 - 27277832
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgt 212  Q
    |||||||||||||||||| ||||||||||||  |||||| |||| ||||||||||    
T  27277779 actatgaagcacatacactcctcggattagacatgtccc-gtgtcggacacgtgt 27277832  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 21211414 - 21211358
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcg 214  Q
    ||||||||||||| |||| |||||||||||  ||||||| |||| ||||||| ||||    
T  21211414 actatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacgcgtcg 21211358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 34185051 - 34185111
Alignment:
Q  158 actatgaagcacatacacccctcggattagatgtgtcccggtgttggacacgtgtcgtgtc 218  Q
    ||||||||||||  |||| |||||||||||  |||||||||||| |||||| |||| ||||    
T  34185051 actatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtc 34185111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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