View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14756_low_11 (Length: 261)
Name: NF14756_low_11
Description: NF14756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14756_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 42913881 - 42913636
Alignment:
| Q |
1 |
caaagaagaatcttcagctgaagaagccaaaccagtggttaaagctgaggctaaagaggtggtagaagaagttgttgttcctgcgaaagatacagaagag |
100 |
Q |
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| T |
42913881 |
caaagaagaatcttcagctgaagaagccaaacctttggttaaagctgagactaaagaggtggtagaagaagttgttgtgcctgtgaaagatacagaagag |
42913782 |
T |
|
| Q |
101 |
gcaacaaagaaggaagaacaaaccgagacaaaggaacctgtcgaggaaacaaaagaaaatgttgattcggttaatgttgaggaaacgaaagaaaacggtg |
200 |
Q |
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| T |
42913781 |
gaaacaaagaaggaagaacaaaccgagacaaaggaacctgtcgaggaaacaaaagaaaacggtaattctcttaatgttgaggaaacgaaagaaaacggtg |
42913682 |
T |
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| Q |
201 |
attctgttgttgaggttgttcaagaaaaaccagctgaagaatctga |
246 |
Q |
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||||||||||||||| |||||| ||||||||||||||||| ||||| |
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| T |
42913681 |
attctgttgttgaggctgttcaggaaaaaccagctgaagagtctga |
42913636 |
T |
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