View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14757_low_30 (Length: 238)
Name: NF14757_low_30
Description: NF14757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14757_low_30 |
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Alignment Details
Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 24 - 222
Target Start/End: Original strand, 35632619 - 35632812
Alignment:
| Q |
24 |
cacccaactacgacccactcatagttaagcatttatcaatcaaaaacattatagaaatagaaatgtagcaaaagccaaacacagcacaaaaaacgcgttc |
123 |
Q |
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| T |
35632619 |
cacccaactacgacccactcatagttaagcatttatcaatcaaaaacattatagaaatagaaatgtagcaaaagccaaacacagcacaaaaaacgcgttc |
35632718 |
T |
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| Q |
124 |
taactagttatgttatgggttgaacttccactcccttttctcatgtggtccctaatctaatctaatctattggacttggctccattgcttctgttctgt |
222 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35632719 |
taactagttatgttatgggttgaacttccactcccttttctcatgtggtcc-----ctaatctaatctattggacttggctccattgcttctgttctgt |
35632812 |
T |
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