View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14757_low_37 (Length: 227)
Name: NF14757_low_37
Description: NF14757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14757_low_37 |
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Alignment Details
Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4940090 - 4939870
Alignment:
| Q |
1 |
ctatcttctatatatgacccgataaaaatcctattttttgttcttgtgaaaaaggtaaatttcatcatgtaaaaatttatattatagagnnnnnnnnncg |
100 |
Q |
| |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
4940090 |
ctatcttctatatatgacccaataaaaatcctattttttgttcttgtgaaaaaggtaaatttcatcatgtaaaaatttatattatagagattttttttcg |
4939991 |
T |
|
| Q |
101 |
tatattacatttttattcccgaacataagtcataagactcataactgtttgactaaaaatgacatttatttgttggtacaagtttaaaaatgtcatttta |
200 |
Q |
| |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
4939990 |
tatattacatttttattcccgaccataagtcataagactcataactgtttgattaaaaatgacatttatttgttggtacaagtttaaaaatgtcatttta |
4939891 |
T |
|
| Q |
201 |
catattttgaaaaattgaaag |
221 |
Q |
| |
|
||||||||||||||||||||| |
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|
| T |
4939890 |
catattttgaaaaattgaaag |
4939870 |
T |
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