View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14758_low_22 (Length: 363)
Name: NF14758_low_22
Description: NF14758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14758_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 29178741 - 29178430
Alignment:
| Q |
1 |
gagagggagtatgtattggaaaagaaatatgtcaaatggaacatgggtgttagactttttattttgttatatatgatatgtgaatttaagtaagatgagg |
100 |
Q |
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| T |
29178741 |
gagagggagtatgtattggaaaagaaatatgtcaaatggaacatgggtgttagactttttattttgttatatatgatatgtgaatttaagtaagatgagg |
29178642 |
T |
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| Q |
101 |
aacatgtgcagttatagatcaataaaaggtagaaataagttttgtgttgaagtcaactatgactagttaaaattaaaaccaattgtcctcattaacaata |
200 |
Q |
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| T |
29178641 |
aacatgtgcagttatagatcaataaaaggtagaaataagttttgtgttgaagtcaactatgactagttaaaattaaaaccaattgtcctcattaacaata |
29178542 |
T |
|
| Q |
201 |
ttatcctgagtttacttaatcctttagattaaatgttcatgactt-ttttcctttgtcttaattattagaacagtaataattttgtttgtgggaaaacag |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29178541 |
ttatcctgagtttacttaatcctttagattaaatgttcatgactttttttcctttgtcttaattattagaacagtaataattttgtttgtgggaaaacag |
29178442 |
T |
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| Q |
300 |
cggaaataaatg |
311 |
Q |
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|||||||||||| |
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| T |
29178441 |
cggaaataaatg |
29178430 |
T |
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