View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14758_low_30 (Length: 276)
Name: NF14758_low_30
Description: NF14758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14758_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 11 - 258
Target Start/End: Complemental strand, 11700281 - 11700034
Alignment:
| Q |
11 |
gaaatgaacacaaatcactttcattacacgacttagttcaaaacaatcgtaaactcactcatgtttggaggatttttaaccatgtgtttgacaatcacat |
110 |
Q |
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| T |
11700281 |
gaaaagaacacaaatcactttcattacacaacttagttcaaagcaatcgtaaactcactcatgtttgaaggatttttaaccatgtgtttgacaatcacat |
11700182 |
T |
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| Q |
111 |
aattttgatttctatatcttccattctcctcaagtaatcataacctattttctccccatcttctataaacttagtatttttcctaagtcgcaaaaatgga |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11700181 |
aattttgatttctatatcttccattctcctcaagtaatcataacctattttctccccatcttctataaacttagtatttttcctaagtcgcaaaaatgga |
11700082 |
T |
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| Q |
211 |
aaatttatcaaacgacgtcctactctatataatagcgatattggcatc |
258 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
11700081 |
aaatttatcaaacgacgtcctactctatataatagtgatattggcatc |
11700034 |
T |
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