View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14758_low_36 (Length: 247)
Name: NF14758_low_36
Description: NF14758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14758_low_36 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 8511935 - 8511718
Alignment:
| Q |
22 |
gacaaaataggattcaattgtataagttaatgagatatggaatgttccactttttcttagaaaataggaccacaaaacctatatttctttaaatttaaga |
121 |
Q |
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| T |
8511935 |
gacaaaataggattcaattgtataagttaatgagatatggaatgttccactttttcttagaaaataggaccacaaaacctatatttctttaaatttaaga |
8511836 |
T |
|
| Q |
122 |
tcacatatactaatcatattctaccattgaccctcatatatgagtttattaatggaagtcatattgatgaggggaaagatggaatgttgacctcgtgtaa |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8511835 |
tcacatatactaatcatattctaccattgaccctcatatatgagtttattaatggaagtcatattgatgaggggaaagatggaatgttgacctcgtgtaa |
8511736 |
T |
|
| Q |
222 |
ttcttaacacacatctct |
239 |
Q |
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|||||||||||||||||| |
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| T |
8511735 |
ttcttaacacacatctct |
8511718 |
T |
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