View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14759_high_2 (Length: 281)
Name: NF14759_high_2
Description: NF14759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14759_high_2 |
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Alignment Details
Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 264
Target Start/End: Complemental strand, 15595842 - 15595589
Alignment:
| Q |
11 |
acatcatcatattggcgatacttctcatatagtagaacctcaagactcgatccaaagacctcggctgacctttaacatattctcatccttgacccaccat |
110 |
Q |
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| T |
15595842 |
acatcatcatattggcgatacttatcatatactagaacctcaagactcaatccaaagatctcggctgacccttaacatattctcatcctcgacccaccat |
15595743 |
T |
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| Q |
111 |
catggtagcttatcttctttcatccattaacttattgaaccttgttaacttatcattccttctttaattccctagaatcgagagatcacatctcgtttca |
210 |
Q |
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||||||||||| |||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
15595742 |
catggtagcttgacttcaatcatccattaacttactgaaccttcttaacttattattccttctttaattccctagaatcgagagatcacctctcgtttca |
15595643 |
T |
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| Q |
211 |
atccaccctaaagattctattttccacttactgttgcacttgtgttttcttagt |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15595642 |
atccaccctaaagattctattttccacttactgttgcacttgtgttttcttagt |
15595589 |
T |
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