View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14760_high_3 (Length: 268)
Name: NF14760_high_3
Description: NF14760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14760_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 88 - 261
Target Start/End: Complemental strand, 13266446 - 13266273
Alignment:
| Q |
88 |
gtatccactcttaatatatttttgatctcaaaacttagaggagtaaaattcctacttttgtatatgacattgaaaagatacaaaaggaaatatacgaggg |
187 |
Q |
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| T |
13266446 |
gtatccactcttaatatatttttgatctcaaaatttagaggagtaaaattcctacttttgtatatgacattgaaaagatacaaaaggaaatatacgaggg |
13266347 |
T |
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| Q |
188 |
gttaaaagcaactgttgtactgctactactactagtattattgttgtnnnnnnntacatgctttccatgttcat |
261 |
Q |
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| T |
13266346 |
gttaaaagcaactggtgtactgctactactactagtattattgttgtaaaaaaatacatgctttccatgttcat |
13266273 |
T |
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