View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14760_high_5 (Length: 237)
Name: NF14760_high_5
Description: NF14760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14760_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 9499784 - 9500006
Alignment:
| Q |
1 |
tgaaccaaagcctctcccatcaccaacccccactttttatgaaggccttattccactccaccatttgttgcctactttcaatttctgtacatggtttgtt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
9499784 |
tgaaccaaagcctctcccatcaccaacccccactttttatgaaggccttattccactccaccatttgttgcctactttcaatttctgtacatggtctgtt |
9499883 |
T |
|
| Q |
101 |
attgtctgctagaatattatggcgtcgtttgatccacttagtgggataaggctaggttgttgtttattactgtttgctgaccgttctggtatgttgctgg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
9499884 |
attgtctgctagaatattatggcgtcgtttgatccactcagtgggataaggctaggttgttgtttattactgtctgctgaccgttctggtatgttgctgg |
9499983 |
T |
|
| Q |
201 |
ccatccctcccactgttcttttt |
223 |
Q |
| |
|
||||||||||||||||||||||| |
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| T |
9499984 |
ccatccctcccactgttcttttt |
9500006 |
T |
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