View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14760_high_8 (Length: 207)
Name: NF14760_high_8
Description: NF14760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14760_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 33125274 - 33125093
Alignment:
| Q |
12 |
agatgaagaggtaattccaagggttttccatatcattgag-ttttacttagatttatacaatatgttaaattcttgtgtgcaggtccctttactagacaa |
110 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
33125274 |
agatgaagaggtaattccaagggttttccatatcattgaggttttacttagatttatacaatatgttaaattcttgtgttcaggtccctttactagacaa |
33125175 |
T |
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| Q |
111 |
cattcactggaaggagttatcagttcttatgtatgtttgggtggcttttctcattgttcaaattcttaaggtagttaatatt |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33125174 |
cattcactggaaggagttatcagttcttatgtatgtttgggtggcttttctcattgttcaaattcttaaggtagttaatatt |
33125093 |
T |
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