View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14760_low_7 (Length: 228)
Name: NF14760_low_7
Description: NF14760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14760_low_7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 9 - 228
Target Start/End: Complemental strand, 52780036 - 52779817
Alignment:
| Q |
9 |
ctatgaatggtgctgattgaagtaatagaaaccatgaaatccatggagcgaaaagatagttaactcctacatggtgtaagaactcttcttttaccatctt |
108 |
Q |
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| T |
52780036 |
ctatgaatggtgctgattgaagtaatagaaaccatgaaatccatggagcgaaaagatagttaactcctacatggtgtaagaactcttcttttaccatctt |
52779937 |
T |
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| Q |
109 |
aaagaaaaataaacatcttaagaggtaaagaagagagagtaatgcgagtataaaaagggacatagaccatagtactatgaaaacagaggaaggaagcatg |
208 |
Q |
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| T |
52779936 |
aaagaaaaataaacatcttaagaggtaaagaagagagagtaatgcgagtataaaaagagacatagaccatagtactatgaaaacagaggaaggaagcatg |
52779837 |
T |
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| Q |
209 |
ctaagcacgtgtcttgattt |
228 |
Q |
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|||||||||||||||||||| |
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| T |
52779836 |
ctaagcacgtgtcttgattt |
52779817 |
T |
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