View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14761_high_1 (Length: 541)
Name: NF14761_high_1
Description: NF14761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14761_high_1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 479; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 16 - 541
Target Start/End: Complemental strand, 45422640 - 45422118
Alignment:
| Q |
16 |
cacttacatcacttaaataaggaggagagtcatcagtgtcctcatgtgattttctaacaccaaagtttaaatcatttgaggcttcaagtgaacatacaga |
115 |
Q |
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| T |
45422640 |
cacttacatcacttaaataaggag---agtcatcagtgtcctcatgtgattttctaacaccaaagtttaaatcatttgaggcttcaagtgaacatacaga |
45422544 |
T |
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| Q |
116 |
agatggttttcgtgcattacataagttaatagcactaacttttctctttcctctaattctaggtgcattggtatggctagcagcagcttcagaatgttca |
215 |
Q |
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| T |
45422543 |
agatggtttttgtgcattacataagttaatagcactagcttttctctttcctctaattctaggtgcattggtatggctagcagcagcttcagaatgttca |
45422444 |
T |
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| Q |
216 |
tcaacagttggtagtaattctctacttctttcatatccagagtttgatttggtagcagcatttaaagttaagtgtttttgttgttgaaattttgtacaag |
315 |
Q |
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| T |
45422443 |
tcaacagttggtagtaattctctacttctttcatatccagagtttgatttggtagcagcatttaaagttaagtgtttttgttgttgaaattttgtacaag |
45422344 |
T |
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| Q |
316 |
caactgcttttgattctttctcttgtactctttgttgatttgatttgagaaacactgcaggtatagaaaagtttgagaagttcacttttccannnnnnng |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
45422343 |
caactgcttttgattctttctcttgtactctttgttgatttgatttgagaaacactgcaggtatagaaaagtttgagaagttcacttttccatttttttg |
45422244 |
T |
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| Q |
416 |
atattcacaccccatcaagtactgtttctgtgagtttgttgttgcagtttggtttgaatccactcttggttttttgaaaggagttaaatatgtgaacatg |
515 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
45422243 |
atattcacaccccatcaagtactgtttctgtgagtttgttgttgcagtttggtttgaatccactcttggttttttgagaggagttaaatatgtgaacatg |
45422144 |
T |
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| Q |
516 |
tgagaggaacctaggccattgctttt |
541 |
Q |
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| T |
45422143 |
tgagaggaacctaggccattgctttt |
45422118 |
T |
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