View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14761_high_3 (Length: 304)
Name: NF14761_high_3
Description: NF14761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14761_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 5 - 286
Target Start/End: Complemental strand, 33296994 - 33296709
Alignment:
| Q |
5 |
gactcaagatatcaacttagattcatttctaaaccaaaattgcacattgcacacgtggtgtgacactattgagatgttttgcttatatacaagtggttgt |
104 |
Q |
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| T |
33296994 |
gactcaagatatcaacttagattcatttctaaaccaaaattgcacattgcacacgtggtgtgacactattgagatgttttgcttatatacaagtggttgt |
33296895 |
T |
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| Q |
105 |
tcttagtgtgcttgaaagtatagtgatgtcaaagact-aggcagaattgttgaaattcaattgcaatagttagtctcgtatcgactatggtatatc--ag |
201 |
Q |
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| T |
33296894 |
tgttagtgtgcttgaaagtatagtgatgtgaaagactaaggcagaattgttgaaattcaagtgcaatggttagtctcgcatcgactatggtatatcagag |
33296795 |
T |
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| Q |
202 |
agagagataactcttatattcgacatcttcc-nnnnnnnnttataagtatgttgtgttcagatcttgatggtcctgatatatagtt |
286 |
Q |
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| T |
33296794 |
agagagataactcttatattcgacatcttccaaaaaaaaattataagtatgttgtgttcggatcttgatggtcctgatatatagtt |
33296709 |
T |
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