View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14761_low_4 (Length: 388)
Name: NF14761_low_4
Description: NF14761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14761_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 29 - 370
Target Start/End: Complemental strand, 36026308 - 36025967
Alignment:
| Q |
29 |
tatctccatactacattaccagaagcatttgtggaaaaatatcatattctggaacgtcctcttannnnnnnnnnnnngatagtactagaacgtcctctta |
128 |
Q |
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| T |
36026308 |
tatctccatactacattaccagaagcatttgtggaaaaatatcatattctggaacgtcctcttatttttatttttttgatagtactagaacgtcctctta |
36026209 |
T |
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| Q |
129 |
ttaaatatcaactgacagtaaaaccatagttgaatgaagagaattaataaaagaataagagaaccggggaaaaatattgtgtcggatttcgtaaagcaag |
228 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36026208 |
ttaaatatcaactgacagtaagaccatagttgaatgaagagaattaataaaagaataagagaaccggggaaaaatattgtgtcggatttcgtaaagcaag |
36026109 |
T |
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| Q |
229 |
aacccacaagagatccaactcaatctattcgataataatttcttctgaatcggaatactacaaatacctccaaacatatcaaacttgagaggacagattt |
328 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36026108 |
aacccacaagagatccaactcaatctattcgataataatttcttctgaatcggaatactacaaatacctccaaacatatcaaacttgagaggacagattt |
36026009 |
T |
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| Q |
329 |
taggttgaggttgtatttatcatgttaaattattgtgtaagg |
370 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
36026008 |
taggttgaggttgtatttatcatgttaaattattgtgtaagg |
36025967 |
T |
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