View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14762_low_30 (Length: 221)
Name: NF14762_low_30
Description: NF14762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14762_low_30 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 7626531 - 7626730
Alignment:
| Q |
18 |
tatactacccttaacatttgtcacacacatgtaatgtgtttggaatgatcgatcttgtacattattcagtgtactaaaccttaaaacaatagtgttagtg |
117 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7626531 |
tatagtactcttaacatttgtcacacacatgtaatgtgtttggaatgatcgatcttgtacattattcagtgtactaaaccttaaaacaatagtgttagtg |
7626630 |
T |
|
| Q |
118 |
tacgtgggttctatcacaagttaattggagcaggtgaaattagggaattggtctggtaagtgtgagacattcccatgccatgtatctgtgctcctcctca |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| || |||||| |
|
|
| T |
7626631 |
tacgtgggttctatcacaagttaattggagcaggtgaaattagggaattggtctggtaagtgtgagacattcccatgccatgtgtgtgtgttcttcctca |
7626730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University