View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14762_low_33 (Length: 201)

Name: NF14762_low_33
Description: NF14762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14762_low_33
NF14762_low_33
[»] chr4 (71 HSPs)
chr4 (80-187)||(3296707-3296814)
chr4 (83-177)||(48554069-48554163)
chr4 (80-187)||(51906583-51906689)
chr4 (98-175)||(10580042-10580119)
chr4 (117-187)||(30608490-30608560)
chr4 (123-187)||(26168255-26168319)
chr4 (117-175)||(3296801-3296859)
chr4 (117-187)||(51906676-51906746)
chr4 (98-175)||(29691750-29691827)
chr4 (98-175)||(54168834-54168911)
chr4 (101-175)||(1791389-1791463)
chr4 (123-185)||(5544949-5545011)
chr4 (89-187)||(35166696-35166794)
chr4 (98-175)||(54142327-54142404)
chr4 (123-175)||(1791323-1791375)
chr4 (99-175)||(5545023-5545099)
chr4 (117-188)||(48759972-48760043)
chr4 (98-175)||(7118004-7118080)
chr4 (98-175)||(28505211-28505287)
chr4 (98-175)||(49426363-49426440)
chr4 (98-175)||(54143512-54143589)
chr4 (98-175)||(54167496-54167573)
chr4 (99-175)||(17287489-17287565)
chr4 (98-180)||(17288384-17288466)
chr4 (98-180)||(30546157-30546238)
chr4 (98-180)||(55347558-55347639)
chr4 (98-175)||(2669449-2669525)
chr4 (98-175)||(12922644-12922720)
chr4 (98-175)||(21235030-21235106)
chr4 (98-175)||(26168167-26168244)
chr4 (98-175)||(28957753-28957829)
chr4 (117-166)||(34129179-34129228)
chr4 (98-175)||(40841464-40841540)
chr4 (98-175)||(43980000-43980076)
chr4 (99-175)||(7118176-7118252)
chr4 (123-175)||(10580130-10580182)
chr4 (98-180)||(789892-789973)
chr4 (98-180)||(40841904-40841985)
chr4 (98-180)||(47053758-47053840)
chr4 (98-175)||(1317062-1317139)
chr4 (98-175)||(3296545-3296622)
chr4 (98-175)||(28957313-28957389)
chr4 (98-175)||(30545715-30545792)
chr4 (98-175)||(31227881-31227957)
chr4 (98-175)||(41510070-41510147)
chr4 (117-166)||(41510230-41510278)
chr4 (98-175)||(46263077-46263154)
chr4 (98-175)||(47058518-47058595)
chr4 (118-175)||(48553898-48553955)
chr4 (98-175)||(51906830-51906907)
chr4 (99-175)||(1317504-1317579)
chr4 (121-188)||(30047875-30047943)
chr4 (121-188)||(30062216-30062284)
chr4 (99-175)||(46262637-46262712)
chr4 (110-176)||(12107707-12107772)
chr4 (98-172)||(12923084-12923158)
chr4 (98-180)||(29691522-29691604)
chr4 (98-180)||(38026118-38026199)
chr4 (98-175)||(3296955-3297032)
chr4 (98-155)||(30608267-30608324)
chr4 (80-133)||(30608450-30608503)
chr4 (98-175)||(31228321-31228397)
chr4 (98-175)||(34129311-34129388)
chr4 (98-175)||(38025678-38025754)
chr4 (98-175)||(43979559-43979636)
chr4 (99-175)||(790338-790414)
chr4 (127-175)||(19310789-19310837)
chr4 (127-175)||(30952869-30952916)
chr4 (123-175)||(35468926-35468978)
chr4 (99-155)||(52398702-52398758)
chr4 (98-170)||(55347980-55348051)
[»] chr2 (57 HSPs)
chr2 (88-187)||(2191380-2191479)
chr2 (80-187)||(21217142-21217248)
chr2 (80-187)||(21265154-21265260)
chr2 (98-175)||(39947097-39947174)
chr2 (117-187)||(21217085-21217155)
chr2 (117-187)||(21265247-21265317)
chr2 (98-175)||(10709477-10709554)
chr2 (98-175)||(18107436-18107513)
chr2 (98-175)||(39945844-39945921)
chr2 (117-187)||(3691246-3691317)
chr2 (98-175)||(24093331-24093408)
chr2 (98-175)||(32861051-32861128)
chr2 (99-171)||(10710842-10710914)
chr2 (109-171)||(2517578-2517641)
chr2 (123-185)||(7083687-7083749)
chr2 (98-175)||(2191219-2191296)
chr2 (99-175)||(21182309-21182385)
chr2 (123-175)||(32860988-32861040)
chr2 (98-185)||(2517405-2517492)
chr2 (98-185)||(21217332-21217419)
chr2 (98-181)||(39096968-39097050)
chr2 (98-180)||(6476084-6476165)
chr2 (98-180)||(6476529-6476610)
chr2 (98-180)||(10711013-10711095)
chr2 (117-186)||(21267226-21267296)
chr2 (98-180)||(23222874-23222956)
chr2 (98-180)||(27377646-27377727)
chr2 (98-175)||(1804234-1804310)
chr2 (98-175)||(1804674-1804750)
chr2 (98-175)||(3854509-3854585)
chr2 (98-175)||(11451198-11451274)
chr2 (98-175)||(21264993-21265070)
chr2 (123-180)||(24093419-24093476)
chr2 (98-175)||(39096526-39096602)
chr2 (99-175)||(3624925-3625001)
chr2 (123-187)||(10706514-10706578)
chr2 (117-187)||(32114328-32114399)
chr2 (98-180)||(44934694-44934776)
chr2 (98-175)||(3854068-3854145)
chr2 (98-175)||(12090137-12090213)
chr2 (98-175)||(21216925-21217002)
chr2 (98-175)||(21265400-21265477)
chr2 (98-175)||(24093158-24093235)
chr2 (98-175)||(26525464-26525540)
chr2 (98-175)||(26525906-26525982)
chr2 (127-187)||(2606523-2606583)
chr2 (99-175)||(32114483-32114559)
chr2 (110-176)||(30311198-30311264)
chr2 (98-180)||(39729617-39729699)
chr2 (98-175)||(3691400-3691477)
chr2 (110-175)||(11450758-11450822)
chr2 (118-175)||(21267399-21267456)
chr2 (126-175)||(22704424-22704472)
chr2 (110-175)||(23221836-23221901)
chr2 (110-175)||(27378103-27378167)
chr2 (98-174)||(7083525-7083601)
chr2 (118-186)||(39600763-39600831)
[»] chr8 (38 HSPs)
chr8 (98-175)||(44024400-44024477)
chr8 (98-175)||(21005960-21006037)
chr8 (98-175)||(4624535-4624612)
chr8 (98-187)||(6297873-6297962)
chr8 (98-175)||(11089133-11089210)
chr8 (123-187)||(13315365-13315429)
chr8 (98-175)||(20682710-20682787)
chr8 (123-175)||(6297725-6297777)
chr8 (123-187)||(10047741-10047805)
chr8 (98-180)||(12734170-12734251)
chr8 (98-180)||(29917549-29917630)
chr8 (98-175)||(20682935-20683012)
chr8 (98-179)||(26720319-26720400)
chr8 (98-175)||(36155273-36155350)
chr8 (123-187)||(21005885-21005949)
chr8 (123-187)||(45369058-45369122)
chr8 (117-180)||(26997735-26997797)
chr8 (98-180)||(17914194-17914276)
chr8 (98-175)||(6297637-6297714)
chr8 (98-175)||(9800041-9800118)
chr8 (98-187)||(10047641-10047730)
chr8 (99-176)||(16682532-16682609)
chr8 (123-172)||(17915284-17915333)
chr8 (98-185)||(34614010-34614096)
chr8 (98-180)||(6298046-6298128)
chr8 (98-180)||(26997880-26997962)
chr8 (117-166)||(12489390-12489439)
chr8 (118-175)||(12489557-12489614)
chr8 (98-175)||(29917107-29917183)
chr8 (98-175)||(44148579-44148656)
chr8 (117-187)||(9800201-9800270)
chr8 (96-175)||(13315204-13315283)
chr8 (117-175)||(16662330-16662387)
chr8 (98-175)||(6297464-6297541)
chr8 (98-175)||(9800354-9800431)
chr8 (110-175)||(17915530-17915594)
chr8 (98-174)||(12734615-12734691)
chr8 (135-175)||(17915382-17915422)
[»] chr5 (51 HSPs)
chr5 (115-187)||(31176670-31176742)
chr5 (118-187)||(15978551-15978620)
chr5 (80-187)||(18339293-18339400)
chr5 (117-187)||(18339236-18339306)
chr5 (98-175)||(119186-119263)
chr5 (98-184)||(4187847-4187933)
chr5 (98-171)||(119795-119868)
chr5 (98-175)||(19353080-19353157)
chr5 (123-187)||(35373611-35373675)
chr5 (123-187)||(35383403-35383467)
chr5 (116-187)||(29751820-29751892)
chr5 (116-187)||(29752486-29752558)
chr5 (117-186)||(3935550-3935620)
chr5 (98-180)||(18999651-18999733)
chr5 (109-175)||(30415333-30415399)
chr5 (98-180)||(31162418-31162499)
chr5 (98-175)||(3406696-3406773)
chr5 (110-175)||(8750383-8750448)
chr5 (98-175)||(39402214-39402290)
chr5 (98-175)||(39402656-39402732)
chr5 (98-181)||(119969-120052)
chr5 (98-152)||(19352496-19352550)
chr5 (98-175)||(31588357-31588435)
chr5 (130-187)||(87131-87188)
chr5 (98-175)||(718235-718312)
chr5 (98-175)||(3191800-3191876)
chr5 (98-175)||(3192242-3192318)
chr5 (98-175)||(5747203-5747279)
chr5 (98-175)||(6543417-6543493)
chr5 (98-175)||(14626100-14626177)
chr5 (98-175)||(16284276-16284353)
chr5 (98-175)||(21949402-21949478)
chr5 (98-175)||(31093438-31093514)
chr5 (98-175)||(31162863-31162939)
chr5 (121-187)||(16284442-16284508)
chr5 (98-175)||(87272-87349)
chr5 (98-175)||(3878774-3878851)
chr5 (98-175)||(8648076-8648153)
chr5 (98-175)||(18999368-18999445)
chr5 (98-175)||(21949842-21949918)
chr5 (123-188)||(26392141-26392205)
chr5 (98-175)||(28641163-28641239)
chr5 (98-175)||(31176509-31176586)
chr5 (110-182)||(4186749-4186821)
chr5 (116-175)||(3406634-3406693)
chr5 (124-175)||(13987458-13987509)
chr5 (98-175)||(3879215-3879291)
chr5 (110-175)||(5746763-5746827)
chr5 (98-175)||(6543857-6543932)
chr5 (98-175)||(18340661-18340738)
chr5 (99-175)||(30351716-30351792)
[»] chr7 (39 HSPs)
chr7 (80-187)||(17075382-17075488)
chr7 (117-187)||(32092391-32092461)
chr7 (117-187)||(17075475-17075545)
chr7 (99-175)||(49053719-49053795)
chr7 (117-187)||(5029610-5029681)
chr7 (98-187)||(18443620-18443708)
chr7 (98-175)||(28838527-28838604)
chr7 (116-175)||(44803487-44803547)
chr7 (117-175)||(18152931-18152989)
chr7 (98-175)||(18443178-18443254)
chr7 (98-175)||(20544149-20544226)
chr7 (110-172)||(10466621-10466682)
chr7 (98-180)||(28898026-28898107)
chr7 (98-175)||(1244454-1244530)
chr7 (98-175)||(29784390-29784466)
chr7 (98-175)||(41298246-41298323)
chr7 (98-175)||(41298687-41298763)
chr7 (123-187)||(11974827-11974891)
chr7 (123-175)||(22948741-22948793)
chr7 (123-187)||(23548770-23548834)
chr7 (99-175)||(23548846-23548922)
chr7 (99-182)||(30938590-30938673)
chr7 (98-180)||(18152753-18152835)
chr7 (98-175)||(884684-884761)
chr7 (98-175)||(1244013-1244090)
chr7 (117-166)||(6620967-6621016)
chr7 (98-175)||(17075628-17075705)
chr7 (98-179)||(20544321-20544402)
chr7 (98-175)||(28898471-28898548)
chr7 (98-175)||(30939575-30939652)
chr7 (98-175)||(32092230-32092307)
chr7 (139-175)||(11974938-11974974)
chr7 (123-175)||(20544086-20544138)
chr7 (118-180)||(17075216-17075278)
chr7 (125-174)||(42750014-42750064)
chr7 (98-175)||(33847868-33847944)
chr7 (99-175)||(29783937-29784012)
chr7 (99-175)||(33848309-33848384)
chr7 (99-175)||(44803644-44803720)
[»] chr6 (28 HSPs)
chr6 (80-176)||(17157766-17157862)
chr6 (98-175)||(14712832-14712909)
chr6 (117-187)||(17157709-17157779)
chr6 (117-187)||(211581-211651)
chr6 (98-175)||(34984555-34984631)
chr6 (123-187)||(7645845-7645909)
chr6 (108-175)||(17157854-17157921)
chr6 (100-175)||(21113204-21113279)
chr6 (98-180)||(14257144-14257225)
chr6 (98-180)||(33106926-33107008)
chr6 (98-175)||(6162699-6162775)
chr6 (110-175)||(7646005-7646070)
chr6 (98-175)||(33107372-33107448)
chr6 (117-187)||(25932242-25932313)
chr6 (98-180)||(8710351-8710433)
chr6 (97-175)||(20522166-20522243)
chr6 (118-175)||(211443-211500)
chr6 (98-175)||(8709605-8709676)
chr6 (98-175)||(19595660-19595737)
chr6 (98-175)||(20824166-20824242)
chr6 (98-175)||(20824606-20824682)
chr6 (98-180)||(4510185-4510267)
chr6 (98-180)||(5974008-5974090)
chr6 (98-175)||(5975834-5975910)
chr6 (130-187)||(5975928-5975985)
chr6 (98-175)||(15147720-15147796)
chr6 (98-175)||(17157548-17157625)
chr6 (107-175)||(211741-211809)
[»] chr3 (49 HSPs)
chr3 (113-175)||(27013584-27013646)
chr3 (117-187)||(22814459-22814530)
chr3 (80-155)||(51471555-51471630)
chr3 (117-175)||(51471510-51471568)
chr3 (100-175)||(37172256-37172331)
chr3 (98-175)||(4199897-4199973)
chr3 (98-175)||(25770496-25770573)
chr3 (98-175)||(44504267-44504344)
chr3 (98-186)||(48867641-48867729)
chr3 (99-182)||(54588451-54588535)
chr3 (117-187)||(38485859-38485927)
chr3 (117-187)||(43933602-43933673)
chr3 (99-178)||(51588477-51588555)
chr3 (98-180)||(4199450-4199531)
chr3 (98-180)||(27475387-27475468)
chr3 (110-175)||(9218364-9218429)
chr3 (122-187)||(25770583-25770648)
chr3 (98-175)||(34949758-34949834)
chr3 (98-175)||(36899256-36899332)
chr3 (98-175)||(45539651-45539727)
chr3 (98-175)||(48868598-48868675)
chr3 (110-166)||(26741154-26741210)
chr3 (107-175)||(45728337-45728405)
chr3 (98-180)||(2388629-2388710)
chr3 (98-184)||(22814289-22814375)
chr3 (98-180)||(42606722-42606803)
chr3 (98-180)||(44504397-44504479)
chr3 (98-180)||(46690124-46690205)
chr3 (98-175)||(132070-132147)
chr3 (98-175)||(7248500-7248577)
chr3 (96-185)||(9218522-9218611)
chr3 (98-175)||(13637791-13637868)
chr3 (98-175)||(20826730-20826807)
chr3 (98-175)||(22406844-22406921)
chr3 (98-175)||(22407285-22407361)
chr3 (98-175)||(42606282-42606358)
chr3 (98-175)||(45539211-45539287)
chr3 (123-175)||(37172344-37172396)
chr3 (98-173)||(50732229-50732304)
chr3 (98-173)||(50780551-50780626)
chr3 (130-175)||(9217995-9218041)
chr3 (117-155)||(13637670-13637708)
chr3 (98-176)||(38485698-38485776)
chr3 (98-175)||(131948-132025)
chr3 (98-175)||(2389074-2389150)
chr3 (98-175)||(9217822-9217899)
chr3 (98-175)||(34950198-34950275)
chr3 (98-175)||(43933442-43933519)
chr3 (98-175)||(46689684-46689760)
[»] chr1 (42 HSPs)
chr1 (98-175)||(3591175-3591252)
chr1 (109-175)||(50359289-50359355)
chr1 (98-175)||(36793585-36793662)
chr1 (117-187)||(9880647-9880718)
chr1 (98-175)||(18180054-18180131)
chr1 (87-172)||(5172922-5173008)
chr1 (116-186)||(42723114-42723184)
chr1 (98-175)||(19895575-19895652)
chr1 (116-187)||(47541679-47541751)
chr1 (117-180)||(4288296-4288359)
chr1 (98-180)||(9122682-9122763)
chr1 (98-180)||(32266480-32266561)
chr1 (98-180)||(40124073-40124154)
chr1 (130-187)||(5683431-5683488)
chr1 (98-175)||(17968039-17968115)
chr1 (123-172)||(18180142-18180191)
chr1 (119-172)||(31436242-31436295)
chr1 (98-175)||(45230572-45230648)
chr1 (98-175)||(47410865-47410941)
chr1 (98-180)||(17968479-17968561)
chr1 (98-180)||(30427670-30427752)
chr1 (98-180)||(32266925-32267006)
chr1 (98-175)||(3591348-3591425)
chr1 (98-175)||(5683336-5683413)
chr1 (98-175)||(5683572-5683649)
chr1 (98-175)||(18180289-18180366)
chr1 (98-179)||(19976162-19976243)
chr1 (98-175)||(30428116-30428192)
chr1 (98-175)||(37717807-37717883)
chr1 (98-175)||(45664689-45664766)
chr1 (98-179)||(45665952-45666033)
chr1 (123-175)||(19895663-19895715)
chr1 (117-175)||(6751222-6751281)
chr1 (98-180)||(1500992-1501074)
chr1 (98-180)||(12868430-12868512)
chr1 (98-180)||(46802319-46802400)
chr1 (117-155)||(48155135-48155173)
chr1 (118-175)||(5683163-5683220)
chr1 (98-175)||(9880486-9880563)
chr1 (98-175)||(12869665-12869742)
chr1 (98-175)||(45230131-45230208)
chr1 (119-175)||(4288467-4288523)
[»] scaffold0009 (3 HSPs)
scaffold0009 (98-175)||(107897-107974)
scaffold0009 (123-187)||(107985-108049)
scaffold0009 (98-175)||(107724-107801)
[»] scaffold0063 (3 HSPs)
scaffold0063 (123-187)||(35055-35119)
scaffold0063 (98-175)||(35203-35280)
scaffold0063 (110-175)||(34967-35032)
[»] scaffold0148 (2 HSPs)
scaffold0148 (98-180)||(33005-33087)
scaffold0148 (98-180)||(29271-29353)
[»] scaffold0085 (2 HSPs)
scaffold0085 (98-175)||(39863-39939)
scaffold0085 (98-175)||(39423-39499)
[»] scaffold0933 (1 HSPs)
scaffold0933 (130-187)||(654-711)


Alignment Details
Target: chr4 (Bit Score: 76; Significance: 2e-35; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 3296814 - 3296707
Alignment:
Q  80 agtccttacattttgcatgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcct 179  Q
    |||||||||||||||| ||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  3296814 agtccttacattttgcgtgactttaaaaacatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggatcaaaaatatatttaatcct 3296715  T
Q  180 agaataat 187  Q
    | ||||||    
T  3296714 aaaataat 3296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 48554163 - 48554069
Alignment:
Q  83 ccttacattttgcatgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatc 177  Q
    ||||| ||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48554163 ccttaaattttgcatgactttaaaagcatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaatc 48554069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 51906689 - 51906583
Alignment:
Q  80 agtccttacattttgcatgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcct 179  Q
    |||||||||||||||| ||| ||||| |  |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |    
T  51906689 agtccttacattttgcgtgactttaaaagcatttattaaaatgtaaggactattcttcaaagtcacgc-aaatgtagggaccaaaaacatatttaatctt 51906591  T
Q  180 agaataat 187  Q
    | ||||||    
T  51906590 aaaataat 51906583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 10580119 - 10580042
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10580119 gattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 10580042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 30608490 - 30608560
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| ||||||    
T  30608490 aaaatgtaaggactattcttaaaagtcacgcaaaatctagggaccaaaaacatatttaatcctaaaataat 30608560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 26168255 - 26168319
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  26168255 taaggactattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaaccctaaaataat 26168319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 3296801 - 3296859
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  3296801 aaaatgtaaggactattctttaaagtcacgcaaaatatatggaccaaaaacatatttaa 3296859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 51906676 - 51906746
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| |||| ||||||    
T  51906676 aaaatgtaaggactattcttcaaagtcatgcaaaatgtagggaccaaaatcatatttaaccctaaaataat 51906746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 29691750 - 29691827
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||| ||||||| || |||||||||||||||||| |||||||||||||||||||    
T  29691750 gattttaaaaacatttattgaaatgtaaagactattttttaaagtcacgcaaaatgtaaggaccaaaaacatatttaa 29691827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 54168834 - 54168911
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| || |||  ||||||||||||||    
T  54168834 gattttaaaaatatttattaaaatgtagggattattcttcaaagtcacgcaaaatatagggattaaaaacatatttaa 54168911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 1791389 - 1791463
Alignment:
Q  101 tttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||| || ||||||| |||||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||    
T  1791389 tttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaacgtaggggccaaaaacatatttaa 1791463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 5545011 - 5544949
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaata 185  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| ||||    
T  5545011 taaggactattcttcaaagtcatgcaaaatgtagggaccaaaaacatatttaaccctaaaata 5544949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 35166696 - 35166794
Alignment:
Q  89 attttgcatgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||||| ||| ||||| || ||||||||||||||||||||||||||||||||||    |||||||| |||| ||| |||||||||||| || ||||||    
T  35166696 attttgcgtgactttaaaaacatttattaaaatgtaaggactattcttcaaagtcgtataaaatgtagggacgaaagacatatttaatcataaaataat 35166794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 54142404 - 54142327
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||||||||||| ||||||||||| |||| || |||||||||||    
T  54142404 gattttaaaaacatttattgaaatgtatggactattcttcaaagtcgcgcaaaatgtagggactaataacatatttaa 54142327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 1791375 - 1791323
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  1791375 taaggactattcttcaaagtcacgcaaaatgtaaggactaaaaacatatttaa 1791323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 5545023 - 5545099
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| || ||||||| ||||||||| |||||| ||||||||||||||||||||| | | |||||||||||||||    
T  5545023 attttaaaaacatttattgaaatgtaagaactatttttcaaagtcacgcaaaatgtaggaagcaaaaacatatttaa 5545099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 48759972 - 48760043
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataatc 188  Q
    |||||||||| |||||||||| ||||||| |||||| || ||||||||||||||||||| |||| |||||||    
T  48759972 aaaatgtaagaactattcttcgaagtcacacaaaatatagggaccaaaaacatatttaaccctaaaataatc 48760043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 7118004 - 7118080
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || || |||| |||| ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  7118004 gattttaaaaacatgtattgaaatttaaggactatttttcaaagtcgcgcaaaatgta-ggaccaaaaacatatttaa 7118080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 28505287 - 28505211
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||||||| |||| ||  |||||||||| |||||||||||||||||||    
T  28505287 gattttaaaaacatttattgaaatgtaaggactattct-caaaatcgtgcaaaatgtagggaccaaaaacatatttaa 28505211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 49426363 - 49426440
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||||| |||||||||||||||| || |||||   |||||||||| |||| ||||||||||||||    
T  49426363 gattttaaaaatatttattgaaatgtaaggactattatttaaagtagagcaaaatgtagggacaaaaaacatatttaa 49426440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 54143512 - 54143589
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||||||||||| ||||||||||||||||||  ||||||| || |||| || |||||||||||    
T  54143512 gattttaaaaacatttattaaaatgtagggactattcttcaaagtcgtgcaaaatatagggactaataacatatttaa 54143589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 54167573 - 54167496
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||| |||||||||||||| ||| |||||||||||||| ||||  |||||||||||||    
T  54167573 gattttaaaaacatttattgaaatataaggactattcttgaaaatcacgcaaaatgtagggacttaaaacatatttaa 54167496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 17287565 - 17287489
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| |||||||||| |||||||||||||||| || |||||  ||||||||||| |||| || |||||||||||    
T  17287565 attttaaaaatatttattgaaatgtaaggactattatttaaagtagcgcaaaatgtagggactaataacatatttaa 17287489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 17288384 - 17288466
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||| |||||||| ||||||||  ||||||||||| |||| || ||||||||||| ||||    
T  17288384 gattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaacccta 17288466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 30546157 - 30546238
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| |||||| ||| |||||||  ||||||||| |||| || ||||||||||| ||||||||||||||||||| ||||    
T  30546157 gattttaaaaatattcattgaaatgtagagactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaacccta 30546238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 55347639 - 55347558
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||||||||||| ||||||||| ||||| |  || |||||||| |||||||||| |||||||||||||    
T  55347639 gattttaaaaacatttattaaaatgtagggactattc-tcaaaattgcgtaaaatgtagggaccaaaaatatatttaatccta 55347558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 2669449 - 2669525
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| |||||||||||||||||||    
T  2669449 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 2669525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 12922720 - 12922644
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| |  ||||||||||| |||||||||||||||||||    
T  12922720 gattttaaaaacatttattgaaatgtagggactattct-caaaattgcgcaaaatgtagggaccaaaaacatatttaa 12922644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 21235106 - 21235030
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||||| | |||| ||  |||||||||| |||||||||||||||||||    
T  21235106 gattttaaaaacatttattgaaatgtaaggactattat-caaaatcgtgcaaaatgtagggaccaaaaacatatttaa 21235030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 26168244 - 26168167
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||| |||||||||| |  ||||| |||||||||||| ||| |||||||||||||||    
T  26168244 gattttaaaaacatttattgaaatgcaaggactattttctaaagtaacgcaaaatgtagggatcaaaaacatatttaa 26168167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 28957753 - 28957829
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| |||||||||||||||||||    
T  28957753 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 28957829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 34129228 - 34129179
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaa 166  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||||||||    
T  34129228 aaaatataaggactactattcaaagtcacgcaaaatgtatggaccaaaaa 34129179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 40841540 - 40841464
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| ||||||||||| ||| || || |||||||| |||||||||||||||||||    
T  40841540 gattttaaaaacatttattgaaatgtagggactattcttaaaa-tcgcgtaaaatgtagggaccaaaaacatatttaa 40841464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 43980000 - 43980076
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| |||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  43980000 gattttaaaaacattcattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 43980076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 7118176 - 7118252
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| || ||||| | ||||||| ||||||||||||||||   ||||||||||| |||| ||||||||||||||    
T  7118176 attttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaa 7118252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 10580130 - 10580182
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||| |||||||||||||||| ||||||||| |||| ||||||||||||||    
T  10580130 taaggattattcttcaaagtcactcaaaatgtaaggacaaaaaacatatttaa 10580182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 789973 - 789892
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||| ||| ||||||| |||||||| |||||| |  ||||||||||| ||||||||||||||||||| ||||    
T  789973 gattttaaaaacattcattgaaatgtatggactatt-ttcaaaattgcgcaaaatgtagggaccaaaaacatatttaacccta 789892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 40841904 - 40841985
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||| ||||||||||| ||| || || |||||||| |||||||||||||| |||| ||||    
T  40841904 gattttaaaaacatttattgaaatgtagggactattctt-aaaatcgcgtaaaatgtagggaccaaaaacataattaacccta 40841985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 47053840 - 47053758
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||||||||||||  | ||| | | |||||||||| ||||||| ||||||||||| ||||    
T  47053840 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaataacatatttaacccta 47053758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 1317139 - 1317062
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  |||||| ||| |||||||||||||||||||    
T  1317139 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 1317062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 3296622 - 3296545
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||| ||| ||||||||||||   ||||||||||| |||| ||||||||||||||    
T  3296622 gattttaaaaacatttaatgaaatgtagggaatattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaa 3296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 28957389 - 28957313
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| ||| |||||| |||| || || |||||||| |||||||||||||||||||    
T  28957389 gattttaaaaacatttattgaaatgtagggattattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 28957313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 30545792 - 30545715
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  |||||| ||| |||||||||||||||||||    
T  30545792 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 30545715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 31227957 - 31227881
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| ||| |||||| |||| || || |||||||| |||||||||||||||||||    
T  31227957 gattttaaaaacatttattgaaatgtagggattattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 31227881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 41510147 - 41510070
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||  |||||||| ||||||||| ||||||||||||||||   ||||||||||| |||  ||||| ||||||||    
T  41510147 gattttagaaatatttaataaaatgtagggactattcttcaaaggggcgcaaaatgtaaggattaaaaatatatttaa 41510070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 41510230 - 41510278
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaa 166  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  41510230 aaaatgtaaggactattcttcaaagtcaagcaaaatgca-ggaccaaaaa 41510278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 46263077 - 46263154
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  |||||| ||| |||||||||||||||||||    
T  46263077 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 46263154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 47058518 - 47058595
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||| |||||||  | ||| | | |||||||||| |||||||||||||||||||    
T  47058518 gattttaaaaacatttattgaaatgtaaagactattaattaaaatgaggcaaaatgtagggaccaaaaacatatttaa 47058595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 48553955 - 48553898
Alignment:
Q  118 aaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| ||||||||||||||||  |||||||||||| |||| |||||| |||||||    
T  48553955 aaatgtatggactattcttcaaagggacgcaaaatgtaaggactaaaaacgtatttaa 48553898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 51906830 - 51906907
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | | ||||| ||||||||||||||||   ||||||||||| |||| ||||||||||||||    
T  51906830 gattttaaaaacatttaatgagatgtagggactattcttcaaaggagcgcaaaatgtaaggactaaaaacatatttaa 51906907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 1317504 - 1317579
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| || ||| ||| ||||||| |||||||| |||||| || ||||||||||| | |||||||||||||||||    
T  1317504 attttaaaaacattcattgaaatgtagggactatt-ttcaaaatcgcgcaaaatgtaggaaccaaaaacatatttaa 1317579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 30047875 - 30047943
Alignment:
Q  121 tgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaa-aacatatttaatcctagaataatc 188  Q
    ||||||||||||||||| ||| || |||||||||| |||  ||| |||||||||||||||| |||||||    
T  30047875 tgtaaggactattcttcgaagacaagcaaaatgtagggagaaaagaacatatttaatcctaaaataatc 30047943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 30062216 - 30062284
Alignment:
Q  121 tgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaa-aacatatttaatcctagaataatc 188  Q
    ||||||||||||||||| ||| || |||||||||| |||  ||| |||||||||||||||| |||||||    
T  30062216 tgtaaggactattcttcgaagacaagcaaaatgtagggagaaaagaacatatttaatcctaaaataatc 30062284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 46262712 - 46262637
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| || ||| ||| ||||||| |||||||| |||||| |  ||||||||||| |||||||||||||||||||    
T  46262712 attttaaaaacattcattgaaatgtagggactatt-ttcaaaattgcgcaaaatgtagggaccaaaaacatatttaa 46262637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 12107772 - 12107707
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaat 176  Q
    ||||||||||||||| | | |||||| |||| || || |||||||| ||||||||||||||||||||    
T  12107772 atttattaaaatgtaggtattattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaat 12107707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 12923084 - 12923158
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatt 172  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||   ||||||||| ||||||||||||||||    
T  12923084 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtacaaaatgtagggaccaaaaacatatt 12923158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 29691604 - 29691522
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||| | ||||||| |||||||||||||||   | ||||||| || |||| |||||||||||||| ||||    
T  29691604 gattttaaaaacatttaatgaaatgtagggactattcttcaaatggatgcaaaatataaggactaaaaacatatttaacccta 29691522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 38026118 - 38026199
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| |  || |||||||| | ||||||||||||||||| ||||    
T  38026118 gattttaaaaacatttattgaaatgtagggactattct-caaaattgcgtaaaatgtaggaaccaaaaacatatttaacccta 38026199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 3296955 - 3297032
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||| ||| ||||||||||||||||   ||||||||||| |||| ||||| ||||||||    
T  3296955 gattttaaaaacatttaatgaaacgtagggactattcttcaaagggtcgcaaaatgtaaggactaaaaatatatttaa 3297032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 30608324 - 30608267
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgta 155  Q
    |||||||| ||||| || | ||||||| ||||||||||||||| | ||||||||||||    
T  30608324 gattttaaaaatatataatgaaatgtagggactattcttcaaaatgacgcaaaatgta 30608267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 30608503 - 30608450
Alignment:
Q  80 agtccttacattttgcatgattttaagaatatttattaaaatgtaaggactatt 133  Q
    |||||||||||||||| ||| ||||| |  |||||||||||||||| |||||||    
T  30608503 agtccttacattttgcgtgactttaaaagcatttattaaaatgtaaagactatt 30608450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 31228321 - 31228397
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| | |||||||| |||| || || |||||||| ||| |||||||||||||||    
T  31228321 gattttaaaaacatttattgaaatgtaggaactattct-caaaatcgcgtaaaatgtagggatcaaaaacatatttaa 31228397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 34129311 - 34129388
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||| | ||||||| ||||||||||||||| |   |||||||||| || |  |||||||||||||    
T  34129311 gattttaaaaatatttaatgaaatgtagggactattcttcaaattggtgcaaaatgtaagggctgaaaacatatttaa 34129388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 38025754 - 38025678
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| | | |||||| ||||||||||||||||| ||||| |  || |||||||| |||||||| ||||||||||    
T  38025754 gattttaaaattttttattgaaatgtaaggactattc-tcaaaattgcgtaaaatgtagggaccaaagacatatttaa 38025678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 43979636 - 43979559
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  ||||||  || |||||||||||||||||||    
T  43979636 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacatagggaccaaaaacatatttaa 43979559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 790338 - 790414
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| || ||||||| |||||||||||||| |  ||||| ||  ||||||  || |||||||||||||||||||    
T  790338 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacttagggaccaaaaacatatttaa 790414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 19310837 - 19310789
Alignment:
Q  127 gactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||||||||||   ||||||||||| |||| ||||||||||||||    
T  19310837 gactattcttcaaagaggcgcaaaatgtaaggactaaaaacatatttaa 19310789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 30952869 - 30952916
Alignment:
Q  127 gactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||||||| ||||| ||||||| | |||||||||||||||||||    
T  30952869 gactattcttcaa-gtcacacaaaatgcagggaccaaaaacatatttaa 30952916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 35468926 - 35468978
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||  |||| |||||||||||||||||| || | ||||||||||||||    
T  35468926 taaggacttatctttaaagtcacgcaaaatgtaggggctaaaaacatatttaa 35468978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 52398758 - 52398702
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgta 155  Q
    ||||||| |||||||| ||||||| |  ||||||||||||||||  |||||||||||    
T  52398758 attttaaaaatatttaataaaatgcagagactattcttcaaagtggcgcaaaatgta 52398702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 55347980 - 55348051
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacata 170  Q
    |||||||| || ||||||| ||||||| ||||||||||| ||| || || |||||||  ||||||||||||||    
T  55347980 gattttaaaaacatttattgaaatgtagggactattctt-aaaatcgcgtaaaatgttgggaccaaaaacata 55348051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 3e-28; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 88 - 187
Target Start/End: Complemental strand, 2191479 - 2191380
Alignment:
Q  88 cattttgcatgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||| ||| ||||| || ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||    
T  2191479 cattttgcgtgactttaaaaacatttattaaaatgtaaggattattcttcaaagtcaagcaaaatgtaaggaccaaaaacatatttaattctaaaataat 2191380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 21217142 - 21217248
Alignment:
Q  80 agtccttacattttgcatgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcct 179  Q
    |||||||||||||||| ||| ||||| |  |||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||| |    
T  21217142 agtccttacattttgcgtgactttaaaagcatttattaaaatataaggactattcttcaaagtcacgc-aaatgtagcgaccaaaaacatatttaatctt 21217240  T
Q  180 agaataat 187  Q
    | ||||||    
T  21217241 aaaataat 21217248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 21265260 - 21265154
Alignment:
Q  80 agtccttacattttgcatgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcct 179  Q
    |||||||||||||||| ||| ||||| |  |||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||| |    
T  21265260 agtccttacattttgcgtgactttaaaagcatttattaaaatataaggactattcttcaaagtcacgc-aaatgtagcgaccaaaaacatatttaatctt 21265162  T
Q  180 agaataat 187  Q
    | ||||||    
T  21265161 aaaataat 21265154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 39947097 - 39947174
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  39947097 gattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgtagggaccaaaaacatatttaa 39947174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 21217155 - 21217085
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||| |||| ||||||    
T  21217155 aaaatgtaaggactattcttcaaagtcacgcaaaatgtagggagcagaaacatatttaaccctaaaataat 21217085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 21265247 - 21265317
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||| |||| ||||||    
T  21265247 aaaatgtaaggactattcttcaaagtcacgcaaaatgtagggagcagaaacatatttaaccctaaaataat 21265317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 10709554 - 10709477
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||||    
T  10709554 gattttaaaaacatttattgaaatgtaaggactattcttcaaaatcacgcaaaatctaaagaccaaaaacatatttaa 10709477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 18107436 - 18107513
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||||||||||||||| ||||||| |||||||||||||||| | |||| ||||||||||||||    
T  18107436 gattttaaaaacatttattaaaatgtaaggattattctttaaagtcacgcaaaatgcagggactaaaaacatatttaa 18107513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 39945921 - 39945844
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||||| ||||||||||| ||||||||  |||||||||||||||||||    
T  39945921 gattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgttgggaccaaaaacatatttaa 39945844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 3691317 - 3691246
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| |||| ||||||    
T  3691317 aaaatgtaaggactattcttcaaagttacgcaaaatgtagggaccaaaaaacatatttaaccctaaaataat 3691246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 24093408 - 24093331
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||| |||||||||| ||||||||||| ||||||||| ||| |||||||||||||||    
T  24093408 gattttaaaaacatttattgaaatgcaaggactatttttcaaagtcactcaaaatgtagggatcaaaaacatatttaa 24093331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 32861051 - 32861128
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||| ||||||||||| ||||||||||| ||||||| | |||||||||||||||||||    
T  32861051 gattttaaaaacatttattgaaatataaggactatttttcaaagtcacacaaaatgcagggaccaaaaacatatttaa 32861128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 10710842 - 10710914
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatat 171  Q
    ||||||| || ||||||| ||||| |||| |||||||||||||||||||||||| || |||||||||||||||    
T  10710842 attttaaaaacatttattgaaatgcaagggctattcttcaaagtcacgcaaaatataaggaccaaaaacatat 10710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 2517578 - 2517641
Alignment:
Q  109 tatttattaaaatgtaaggactattcttcaa-agtcacgcaaaatgtatggaccaaaaacatat 171  Q
    |||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  2517578 tatttattgaaatgtaaggactatttttcaatagtcatgcaaaatgtatggaccaaaaacatat 2517641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 7083749 - 7083687
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaata 185  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||||||| |||| ||||    
T  7083749 taaggattattcttcaaagtcatgcaaaatgtagggaccaaaaacatatttaaccctaaaata 7083687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 2191296 - 2191219
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||||||||||||||||||||   ||||||||||| |||| ||||||||||||||    
T  2191296 gattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaa 2191219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 21182385 - 21182309
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| || ||||| | ||||||||||||||||||||||||   ||||||||||| |||| ||||||||||||||    
T  21182385 attttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaa 21182309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 32861040 - 32860988
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  32861040 taagaactattcttcagagtcacgcaaaatgtagggaccaaaaacatatttaa 32860988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 2517492 - 2517405
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaata 185  Q
    |||||||| || ||||| | ||||||| ||||||||||||||||  |||||||||||| |||| ||||| |||||||| |||| ||||    
T  2517492 gattttaaaaacatttaatgaaatgtagggactattcttcaaagagacgcaaaatgtaaggactaaaaatatatttaaccctaaaata 2517405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 21217332 - 21217419
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaata 185  Q
    |||||||| || ||||| | ||||||| ||||||||||||||||   ||||||||||| |||| |||||||||||||| |||| ||||    
T  21217332 gattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaaccctacaata 21217419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 39096968 - 39097050
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctag 181  Q
    |||||||| || ||||||| ||||||||||| |||||| |||| ||  |||||||||| ||||||||||||||||||| |||||    
T  39096968 gattttaaaaacatttattgaaatgtaaggattattct-caaaatcgtgcaaaatgtagggaccaaaaacatatttaaccctag 39097050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 6476165 - 6476084
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| ||||||||||||||||||| ||||    
T  6476165 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacccta 6476084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 6476529 - 6476610
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| ||||||||||||||||||| ||||    
T  6476529 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacccta 6476610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 10711013 - 10711095
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| |||||||| |||||||||||||||||| || ||||  | | ||||| || ||||||||||||||||||| ||||    
T  10711013 gattttaaaaatatttactaaaatgtaaggactattttttaaagaaaagtaaaatatagggaccaaaaacatatttaacccta 10711095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 21267296 - 21267226
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatgga-ccaaaaacatatttaatcctagaataa 186  Q
    |||||||||||||||||||||||||||| ||||||||||  || | |||||||||||||| |||| |||||    
T  21267296 aaaatgtaaggactattcttcaaagtcatgcaaaatgtagagatcaaaaaacatatttaaccctaaaataa 21267226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 23222874 - 23222956
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || || |||| |||||||||||||||| || |||||  ||||||||||| |||| |||||||||||||| ||||    
T  23222874 gattttaaaaacatatattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatatttaacccta 23222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 27377727 - 27377646
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| ||||||||||||||||||| ||||    
T  27377727 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacccta 27377646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 1804310 - 1804234
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| |||||||||||||||||||    
T  1804310 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 1804234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 1804674 - 1804750
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| |||||||||||||||||||    
T  1804674 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 1804750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 3854509 - 3854585
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| |||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  3854509 gattttaaaaacattcattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 3854585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 11451198 - 11451274
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| |||||||||||||||||||    
T  11451198 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 11451274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 21265070 - 21264993
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||| ||||||||||||||||   ||||||||||| |||| ||||||||||||||    
T  21265070 gattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaa 21264993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 24093419 - 24093476
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    ||||||| |||||||||||||||| |||||||| |||| |||||||||||||| ||||    
T  24093419 taaggacaattcttcaaagtcacgtaaaatgtagggacgaaaaacatatttaacccta 24093476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 39096602 - 39096526
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||||||||||||| ||||| || | |||||| || |||||||||||||||||||    
T  39096602 gattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgcacaaaatatagggaccaaaaacatatttaa 39096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 3624925 - 3625001
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| || ||||||| ||||||| ||||||||||||||||||   ||||||||| | ||| |||||||||||||    
T  3624925 attttaaaaacatttattgaaatgtagggactattcttcaaagtccgtcaaaatgtaagaaccgaaaacatatttaa 3625001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 10706514 - 10706578
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||||||||| ||||||||||||||||||  ||| |||||  |||||||||||| ||||||    
T  10706514 taaggactattctttaaagtcacgcaaaatgtagagactaaaaatgtatttaatcctaaaataat 10706578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 32114399 - 32114328
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaatcctagaataat 187  Q
    ||||| |||| ||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||| ||||||    
T  32114399 aaaatctaagcactattcttcaaaatcacgcaaaatgtagggaccaaaaaatatatttaaccctaaaataat 32114328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 44934694 - 44934776
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||||||||||||  | ||| | | | |||||||| ||||||||||||||||||| ||||    
T  44934694 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggaaaaatgtagggaccaaaaacatatttaacccta 44934776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 3854145 - 3854068
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  |||||| ||| |||||||||||||||||||    
T  3854145 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 3854068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 12090137 - 12090213
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| |||||||||| |||| || ||||||||| | |||||||||||||||||||    
T  12090137 gattttaaaaacattcattgaaatgtagggactattct-caaaatcgcgcaaaatgcagggaccaaaaacatatttaa 12090213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 21217002 - 21216925
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||| ||||||||||||||||   ||||||||||| |||| ||||| ||||||||    
T  21217002 gattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaa 21216925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 21265400 - 21265477
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||| ||||||||||||||||   ||||||||||| |||| ||||| ||||||||    
T  21265400 gattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaa 21265477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 24093235 - 24093158
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||| ||||||||||||||||   |||||| |||| |||| ||||||||||||||    
T  24093235 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaagtgtaaggactaaaaacatatttaa 24093158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 26525540 - 26525464
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||||| ||||||||| |||| ||| |||| ||  |||||| ||| |||||||||||||||||||    
T  26525540 gattttaaaaatatttattgaaatgtaagaactactct-caaaatcgtgcaaaacgtagggaccaaaaacatatttaa 26525464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 26525906 - 26525982
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||| || |||||||| | |||| || ||||||||||| |||||||||||||||||||    
T  26525906 gattttaaaaacatttattgaaatatagggactattat-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 26525982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 2606523 - 2606583
Alignment:
Q  127 gactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||| ||||||| || | ||||||| ||||||||||| || ||||||    
T  2606523 gactattcttcaaagtcatgcaaaatataggaaccaaaatcatatttaatcttaaaataat 2606583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 32114483 - 32114559
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| |||||||| | |||||||||||||||||||  |||   ||||||||||| |||| ||||| ||||||||    
T  32114483 attttaaaaatatttaatgaaatgtaaggactattctttgaagaggcgcaaaatgtaaggactaaaaatatatttaa 32114559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 30311264 - 30311198
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaat 176  Q
    ||||| |||||||||||||||||| ||||||     |||||||||| ||||| ||||||||||||||    
T  30311264 atttaataaaatgtaaggactatttttcaaatgagtgcaaaatgtaaggaccgaaaacatatttaat 30311198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 39729617 - 39729699
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| |||||||| | |||| ||| |||||||||||||| | ||||||||| || |||| |||||| || |||| ||||    
T  39729617 gattttaaaaatatttaatgaaatataaagactattcttcaaactgacgcaaaatataaggactaaaaacgtaattaacccta 39729699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 3691400 - 3691477
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||| ||||||||||||||||   ||||||||  | |||| ||||||||||||||    
T  3691400 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaaatacaaggactaaaaacatatttaa 3691477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 11450822 - 11450758
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| ||||||| ||| |||||| |||| || || |||||||| |||||||||||||||||||    
T  11450822 atttattgaaatgtagggattattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 11450758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 21267399 - 21267456
Alignment:
Q  118 aaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| ||||||||||||||||   || |||||||| |||| ||||||||||||||    
T  21267399 aaatgtagggactattcttcaaaggatcgaaaaatgtaaggactaaaaacatatttaa 21267456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 22704424 - 22704472
Alignment:
Q  126 ggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  22704424 ggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 22704472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 23221901 - 23221836
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| ||||||| | ||||||||||||||||  || ||||||| ||| ||| |||||||||||    
T  23221901 atttattgaaatgtaggtactattcttcaaagtcgtgctaaatgtagggatcaataacatatttaa 23221836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 27378103 - 27378167
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| ||||||| ||| |||||| |||| || || |||||||| |||||||||||||||||||    
T  27378103 atttattgaaatgtagggattattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 27378167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 7083601 - 7083525
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatattta 174  Q
    |||||||| || ||||| | ||||||| |||||||||||||||   ||| |||||||| |||  |||||||||||||    
T  7083601 gattttaaaaaaatttaatgaaatgtagggactattcttcaaatggacgtaaaatgtaaggattaaaaacatattta 7083525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 39600831 - 39600763
Alignment:
Q  118 aaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataa 186  Q
    |||||||| ||||||||||  |||  |||||||||||| |||  |||||||||||||| |||| |||||    
T  39600831 aaatgtaaagactattctttcaagagacgcaaaatgtaaggattaaaaacatatttaaccctaaaataa 39600763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 5e-27; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 44024477 - 44024400
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  44024477 gattttaaaaatatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaa 44024400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 21005960 - 21006037
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||    
T  21005960 gattttaaaaacatttattgaaatgtaaggactatttttcaaagccacgcaaaatgtagggaccaaaaacatatttaa 21006037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 4624612 - 4624535
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||| |||||||||||||||||| ||||||| || |||||||||||||||||||    
T  4624612 gattttaaaaacatttattgaaatgtaaagactattcttcaaagtcatgcaaaatataaggaccaaaaacatatttaa 4624535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 6297873 - 6297962
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||| || ||||| | |||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||  |||| ||||||    
T  6297873 gattttaaaaacatttaatgaaatgtaaggactattcttcaaagtcacgcaaaatgtagggacgaaaaacataattatccctaaaataat 6297962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 11089133 - 11089210
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||||| |||||| |||||||||||  ||||||||||||||||||||||||||||    
T  11089133 gattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacataaaatgtatggaccaaaaacatatttaa 11089210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 13315429 - 13315365
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||| ||||||    
T  13315429 taaggactattcttcaaagtcacgcaaaatgtagggactaaaaacatatttaaccctaaaataat 13315365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 20682787 - 20682710
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || |||||||||||||||||||||||||||||||||| ||| |||| || ||||||| || ||||||||    
T  20682787 gattttaaaaacatttattaaaatgtaaggactattcttcaaagtcgcgctaaatatagggaccaataagatatttaa 20682710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 6297725 - 6297777
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  6297725 taaggactattcttcaaagtcacgcaaaatgtagggaccaaaaacataattaa 6297777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 10047741 - 10047805
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||||||||| ||||| || ||||||||||||||||||| |||| ||||||    
T  10047741 taaggactattcttcaaagtcacgaaaaatatagggaccaaaaacatatttaaacctaaaataat 10047805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 12734251 - 12734170
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| |||||| ||| ||||||| |||||||||| |||| || ||||||||||| ||||||||||||||||||| ||||    
T  12734251 gattttaaaaatattcattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaacccta 12734170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 29917549 - 29917630
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| |||||||||||||||||| |||| ||  |||||||||| ||||||||||||||||||| ||||    
T  29917549 gattttaaaaacatttattgaaatgtaaggactattct-caaaatcgtgcaaaatgtagggaccaaaaacatatttaacccta 29917630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 20682935 - 20683012
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || |||||||||||||||||||| |||||| ||| || ||| ||||||| ||||||| |||||||||||    
T  20682935 gattttaaaaacatttattaaaatgtaaggaccattctttaaaatcgcgctaaatgtagggaccaataacatatttaa 20683012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 26720400 - 26720319
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcct 179  Q
    |||||||| |||||||| | ||||||| ||||||||||||||||   ||||||||||| |||| ||||| ||||||||||||    
T  26720400 gattttaaaaatatttaatgaaatgtagggactattcttcaaaggagcgcaaaatgtagggactaaaaatatatttaatcct 26720319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 36155350 - 36155273
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||||||||||| |||||||| ||||||||| | ||||||||| ||||||| | |||||||||    
T  36155350 gattttaaaaacatttattaaaatgtagggactattattcaaagtcgcacaaaatgtagggaccaatagcatatttaa 36155273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 21005949 - 21005885
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||||| | |||||||||| |||||||||| |||||||| |||| ||||||    
T  21005949 taaggactattcttcaaagttatgcaaaatgtagggaccaaaaatatatttaaccctaaaataat 21005885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 45369122 - 45369058
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||| ||||||||||| |||||||||||||| |||||||||||||||| || |||| ||||||    
T  45369122 taaggattattcttcaaaatcacgcaaaatgtacggaccaaaaacatattcaaccctaaaataat 45369058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 26997797 - 26997735
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||||||||||||||||||||||||||||||| || |||  |||||||||||||| ||||    
T  26997797 aaaatgtaaggactattcttcaaagtcacgcaaaatataggga-aaaaaacatatttaacccta 26997735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 17914276 - 17914194
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||| ||||||||| ||||||||||||||||  ||||||||||||  |||  ||||||||||||| ||||    
T  17914276 gattttaaaaacatttaataaaatgtagggactattcttcaaagagacgcaaaatgtaaagacttaaaacatatttaacccta 17914194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 6297714 - 6297637
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||||  |||| | |||||||||||||||||||||  ||| ||||||||||||||    
T  6297714 gattttaaaaacatttattgaaatgtaaaaactaattttcaaagtcacgcaaaatgtacagacaaaaaacatatttaa 6297637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 9800118 - 9800041
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| ||||||||||||| ||||||||||||   |||||||| || |||| ||||||||||||||    
T  9800118 gattttaaaaacatttaataaaatgtaaggattattcttcaaagaggcgcaaaatctaaggactaaaaacatatttaa 9800041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 10047730 - 10047641
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||| || ||||| | ||||| |||||||||| |||| | ||| ||||||||||  |||||||||||||||||||| || ||||||    
T  10047730 gattttaaaaacatttagtgaaatgcaaggactatttttcagaatcatgcaaaatgtagagaccaaaaacatatttaatcttaaaataat 10047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 16682609 - 16682532
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaat 176  Q
    ||||||| || |||| || |||||||| |||||||||| |||||| |||||||| ||  |||||||||||||||||||    
T  16682609 attttaaaaacattttttgaaatgtaatgactattctttaaagtcgcgcaaaatataatgaccaaaaacatatttaat 16682532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 17915333 - 17915284
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatt 172  Q
    |||| |||||||||||||||||||||||||||| ||| ||||||||||||    
T  17915333 taagaactattcttcaaagtcacgcaaaatgtaaggatcaaaaacatatt 17915284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 34614096 - 34614010
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaata 185  Q
    |||||||| || ||||||| ||||||| | |||||||||||||||| |||||||||||  || ||| ||||||||||| |||| ||||    
T  34614096 gattttaaaaacatttattgaaatgtatg-actattcttcaaagtcgcgcaaaatgtaaagatcaataacatatttaaccctataata 34614010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 6298046 - 6298128
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||| | ||||||||||||||||||||||||  | |||||||||| | || ||||||| |||||| ||||    
T  6298046 gattttaaaaacatttaatgaaatgtaaggactattcttcaaagggaagcaaaatgtaagcactaaaaacacatttaacccta 6298128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 26997880 - 26997962
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| |||| ||| | ||||||| |||||||||||||||   |||||||||||| | || |||||||||||||| ||||    
T  26997880 gattttaaaaataattaatgaaatgtatggactattcttcaaatggacgcaaaatgtaagaactaaaaacatatttaacccta 26997962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 12489390 - 12489439
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaa 166  Q
    ||||||||||||||| |||||||||||||||||||| ||  |||||||||    
T  12489390 aaaatgtaaggactactcttcaaagtcacgcaaaatatagcgaccaaaaa 12489439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 12489557 - 12489614
Alignment:
Q  118 aaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||||||||||||||| |   |||||||||||| |||| ||||||||||||||    
T  12489557 aaatgtaaggactattcttcataacgacgcaaaatgtaaggactaaaaacatatttaa 12489614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 29917183 - 29917107
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || ||||||| ||| ||| |||||||||||||||    
T  29917183 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgcaaaacgtagggatcaaaaacatatttaa 29917107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 44148656 - 44148579
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| ||  |||||||||||||| |||||||||||||||    || |||||||| |||| ||||||||||||||    
T  44148656 gattttaaaaacgtttattaaaatgtagggactattcttcaaaagagcgtaaaatgtagggactaaaaacatatttaa 44148579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 9800201 - 9800270
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaatcctagaataat 187  Q
    ||||||| |||||||  ||||||||||||| |||||||| ||||| |||||||||||||| |||| ||||||    
T  9800201 aaaatgtgaggacta--cttcaaagtcacgtaaaatgtagggaccaaaaaacatatttaaccctaaaataat 9800270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 13315283 - 13315204
Alignment:
Q  96 atgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||||| || ||||| | ||||||| ||||||||||| |||    ||||||||||| |||| ||||||||||||||    
T  13315283 atgattttaaaaacatttaatgaaatgtagggactattctttaaatgggcgcaaaatgtaaggactaaaaacatatttaa 13315204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 16662330 - 16662387
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| |||| ||||||||||| |||| ||||||||| |||| ||||||||||||||    
T  16662330 aaaatgttagga-tattcttcaaattcacacaaaatgtagggactaaaaacatatttaa 16662387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 6297541 - 6297464
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||| | ||||||||||||||   ||||||||||| |||| ||| ||||||||||    
T  6297541 gattttaaaaacatttaatgaaatgtaggaactattcttcaaaggggcgcaaaatgtaaggactaaagacatatttaa 6297464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 9800354 - 9800431
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | |||| || ||||||||||||||||   ||||||||| | |||||||||| ||||||||    
T  9800354 gattttaaaaacatttaatgaaatatatggactattcttcaaaggggcgcaaaatgcaaggaccaaaaatatatttaa 9800431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 17915530 - 17915594
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||| ||||||||||||| ||||||||||||   | ||||||||| |||| ||||||||||||||    
T  17915530 atttaataaaatgtaagga-tattcttcaaaggagcacaaaatgtaaggactaaaaacatatttaa 17915594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 12734615 - 12734691
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatattta 174  Q
    |||||||| || ||||||| ||||||||| |||| |  ||||| ||  |||||| ||| ||||||||||||||||||    
T  12734615 gattttaaaaacatttattgaaatgtaagaactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 12734691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 17915382 - 17915422
Alignment:
Q  135 ttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||||||||||||||| | |||||||||| ||||||    
T  17915382 ttcaaagtcacgcaaaatgtaggaaccaaaaacagatttaa 17915422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 2e-26; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 31176742 - 31176670
Alignment:
Q  115 ttaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  31176742 ttaaaatgtaaggactattcttcaaagtcacgcgaaatgtagggaccaaaaacatatttaatcctaaaataat 31176670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 15978620 - 15978551
Alignment:
Q  118 aaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  15978620 aaatgtaaggactattcttcaaagtcacgcaaaatgtagggatcaaaaacatatttaatcctaaaataat 15978551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 18339293 - 18339400
Alignment:
Q  80 agtccttacattttgcatgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcct 179  Q
    ||||||||||||||||  || ||||| || ||||||||||||||||||| ||||||||||| | ||| |||||||| |||||||||| |||||||| |||    
T  18339293 agtccttacattttgcgagactttaaaaacatttattaaaatgtaaggattattcttcaaaataacgtaaaatgtaaggaccaaaaatatatttaaccct 18339392  T
Q  180 agaataat 187  Q
    | ||||||    
T  18339393 aaaataat 18339400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 18339306 - 18339236
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  18339306 aaaatgtaaggactactcttcaaagtcacgcaaaatgtaaggatcaaaaacatatttaatcctaaaataat 18339236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 119263 - 119186
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  119263 gattttaaaaacatttattgaaatgtaaggactattctttaaagtcacgcaaaatctaaggaccaaaaacatatttaa 119186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 4187847 - 4187933
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaat 184  Q
    |||||||| |||||||||| |||||||||||||||| || |||||  ||||||||||| |||| |||||||||||||| ||||||||    
T  4187847 gattttaaaaatatttattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatatttaaccctagaat 4187933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 119795 - 119868
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatat 171  Q
    |||||||| || ||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||||    
T  119795 gattttaaaaacatttattgaaatgcaaggactattcttcaaagtcacgcaaaatataaggaccaaaaacatat 119868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 19353080 - 19353157
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||    
T  19353080 gattttaaaaacatttattgaaatgtgaggactattcttcaaagtcacacaaaatctaaggaccaaaaacatatttaa 19353157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 35373675 - 35373611
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||| ||||||    
T  35373675 taaggactattcttcaaagttacgcaaaatgtagggaccaaaaacatatttaaccctaaaataat 35373611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 35383467 - 35383403
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||    
T  35383467 taaggactattcttcaaagtcacgcaaaatgtagggatcaaaaacatatttaaccctaaaataat 35383403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 29751892 - 29751820
Alignment:
Q  116 taaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||| |||||||||||||| |||| ||||||    
T  29751892 taaaatgtaaggactatttttcaaagtcacgtaaaatgtagggaccaaaaaacatatttaaccctaaaataat 29751820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 29752558 - 29752486
Alignment:
Q  116 taaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||| |||||||||||||| |||| ||||||    
T  29752558 taaaatgtaaggactatttttcaaagtcacgtaaaatgtagggaccaaaaaacatatttaaccctaaaataat 29752486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 3935550 - 3935620
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaatcctagaataa 186  Q
    |||||||||||||||||||||||||||| ||||||||||  |||| |||||||||||||| |||| |||||    
T  3935550 aaaatgtaaggactattcttcaaagtcatgcaaaatgtagagaccaaaaaacatatttaaccctaaaataa 3935620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 18999651 - 18999733
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| |||||||| | ||||||| ||||||||||||||| | | |||||||||| |||| |||||||||||||| ||||    
T  18999651 gattttaaaaatatttaatgaaatgtatggactattcttcaaaatgaagcaaaatgtaaggactaaaaacatatttaacccta 18999733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 30415333 - 30415399
Alignment:
Q  109 tatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||||||||||| || |||||||||||||||| |||||| || ||| |||||||||||||||    
T  30415333 tatttattaaaatgtaatgattattcttcaaagtcacacaaaatttagggatcaaaaacatatttaa 30415399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 31162499 - 31162418
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| ||||| |||||||| ||||||||||||||||||| ||||    
T  31162499 gattttaaaaacatttattgaaatgtagggactattct-caaaatcacgtaaaatgtagggaccaaaaacatatttaacccta 31162418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 3406696 - 3406773
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||||| || |||||||||||||||||  | || ||||||||||||||    
T  3406696 gattttaaaaacatttattgaaatgtaaggactatttttaaaagtcacgcaaaatgtcggaacgaaaaacatatttaa 3406773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 8750383 - 8750448
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||| ||||||||| ||||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  8750383 atttaataaaatgtagggactattcttcaaagaaacgcaaaatgtaaggactaaaaacatatttaa 8750448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 39402290 - 39402214
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  39402290 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 39402214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 39402656 - 39402732
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||||| ||||||||||||||||| ||||| ||  | |||||||| |||||||||||||||||||    
T  39402656 gattttaaaaatatttattgaaatgtaaggactattc-tcaaaatcgtgtaaaatgtagggaccaaaaacatatttaa 39402732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 119969 - 120052
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctag 181  Q
    |||||||| || ||||||| ||||||||||||||||  ||||||    |||||||||| ||||||||||||||||||| |||||    
T  119969 gattttaaaaacatttattgaaatgtaaggactatttgtcaaagaagggcaaaatgtagggaccaaaaacatatttaaccctag 120052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 19352550 - 19352496
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaat 152  Q
    |||||||| || ||||||| ||||| |||||||||||||||||||||||||||||    
T  19352550 gattttaaaaacatttattgaaatgcaaggactattcttcaaagtcacgcaaaat 19352496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 31588357 - 31588435
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaa-gtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||| | ||||||| ||||||||||||||| |  |||||||||||| |||| ||||||||||||||    
T  31588357 gattttaaaaatatttaatgaaatgtagggactattcttcaaaggggacgcaaaatgtaaggactaaaaacatatttaa 31588435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 87131 - 87188
Alignment:
Q  130 tattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||| |||| ||||||    
T  87131 tattgttcaaagtcatgcaaaatgtagggaccaaaaacatatttaaccctaaaataat 87188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 718235 - 718312
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||||| |||||| |||||| | | |||||||||| | |||||||||||||||||    
T  718235 gattttaaaaacatttattgaaatgtaagaactattattcaaaattatgcaaaatgtaggaaccaaaaacatatttaa 718312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 3191876 - 3191800
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||||||||||||| ||||| ||  |||||||||| |||| ||||||||||||||    
T  3191876 gattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgtgcaaaatgtagggactaaaaacatatttaa 3191800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 3192242 - 3192318
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||||||||||||| ||||| || | |||||| || |||||||||||||||||||    
T  3192242 gattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgcacaaaatatagggaccaaaaacatatttaa 3192318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 5747203 - 5747279
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| |||||||||||||||||||    
T  5747203 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 5747279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 6543493 - 6543417
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| |||||||||||||||||||    
T  6543493 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 6543417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 14626100 - 14626177
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||| || |||||| |||||| | || |||||||||||||||||||    
T  14626100 gattttaaaaacatttattgaaatgtagggactattttttaaagtcgcgcaaagtatagggaccaaaaacatatttaa 14626177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 16284353 - 16284276
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| |||||| ||| ||||||||||||||   |||||||||||| |||| ||||||||||||||    
T  16284353 gattttaaaaacatttaataaaatataaagactattcttcaaaaaaacgcaaaatgtaaggactaaaaacatatttaa 16284276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 21949478 - 21949402
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| |||||||||||||||||||    
T  21949478 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 21949402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 31093438 - 31093514
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| |||||||| |||||| || ||||||||||| |||||||||||||||||||    
T  31093438 gattttaaaaacattcattgaaatgtagggactatt-ttcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 31093514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 31162863 - 31162939
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||||||| |||||| |||| || || |||||||| |||||||||||||||||||    
T  31162863 gattttaaaaacatttattgaaatgtaaggattattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 31162939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 16284508 - 16284442
Alignment:
Q  121 tgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||| | || |||||||||||||||||| || |||||||||| ||| ||||||||| ||||||    
T  16284508 tgtaaggattgtttttcaaagtcacgcaaaatatagggaccaaaaatatacttaatcctaaaataat 16284442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 87272 - 87349
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||| ||||||||||||||||  || |||||| || |||| ||||||||||||||    
T  87272 gattttaaaaacatttaatgaaatgtagggactattcttcaaagggacacaaaatataaggactaaaaacatatttaa 87349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 3878851 - 3878774
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  |||||| ||| |||||||||||||||||||    
T  3878851 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 3878774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 8648076 - 8648153
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||| | |||||||| ||||||||||| ||   |||||||||||| |||| |||| |||||||||    
T  8648076 gattttaaaaatatttaatgaaatgtaaagactattcttccaaaggacgcaaaatgtaaggactaaaatcatatttaa 8648153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 18999445 - 18999368
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||| | ||||||| |||||||||||||||     |||||||||| |||| ||||||||||||||    
T  18999445 gattttaaaaatatttaatgaaatgtatggactattcttcaaaagagtgcaaaatgtaaggactaaaaacatatttaa 18999368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 21949842 - 21949918
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| ||||||||||| ||| || || |||||||| |||||||||||||| ||||    
T  21949842 gattttaaaaacatttattgaaatgtagggactattctt-aaaatcgcgtaaaatgtagggaccaaaaacataattaa 21949918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 26392141 - 26392205
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataatc 188  Q
    |||||| ||||||||||||||||||||||| || ||||| |||| |||||||| |||| |||||||    
T  26392141 taaggaatattcttcaaagtcacgcaaaatatagggacc-aaaatatatttaaccctaaaataatc 26392205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 28641239 - 28641163
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| ||| |||||| |||| || || |||||||| |||||||||||||||||||    
T  28641239 gattttaaaaacatttattgaaatgtagggattattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 28641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 31176586 - 31176509
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||| ||||| ||||||||||  ||||||||| || |||| ||||||||||||||    
T  31176586 gattttaaaaacatttaatgaaatgtatggactgttcttcaaagggacgcaaaatataaggactaaaaacatatttaa 31176509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 4186821 - 4186749
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctaga 182  Q
    ||||||| ||||||| | ||||||||||||||||  || ||||||| ||| ||| ||||||||||| ||||||    
T  4186821 atttattgaaatgtaggtactattcttcaaagtcgtgctaaatgtagggatcaataacatatttaaccctaga 4186749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 3406693 - 3406634
Alignment:
Q  116 taaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||| ||| || ||||||| |||||||||||||||||| ||||  |||||||||||||    
T  3406693 taaaatataaagattattctttaaagtcacgcaaaatgtagggactgaaaacatatttaa 3406634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 13987509 - 13987458
Alignment:
Q  124 aaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||||||| |||  |||| |||||||| |||||||||||||||||||    
T  13987509 aaggactattctttaaatccacgtaaaatgtaaggaccaaaaacatatttaa 13987458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 3879215 - 3879291
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| ||| |||||| |||| || ||||||||||| |||||||||| ||||||||    
T  3879215 gattttaaaaacattcattgaaatgtagggattattct-caaaatcgcgcaaaatgtagggaccaaaaatatatttaa 3879291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 5746827 - 5746763
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| ||||||| ||| |||||| |||| || || |||||||| |||||||||||||||||||    
T  5746827 atttattgaaatgtagggattattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 5746763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 6543857 - 6543932
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| ||| |||||| |||| || || |||||||| |||||||||||||||||||    
T  6543857 gattttaaaaacatttattgaaatgtagggattattct-caaaatcgcgtaaaatgta-ggaccaaaaacatatttaa 6543932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 18340661 - 18340738
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||||||||||||||| ||||   ||||| ||||| |||| |||| |||||||||    
T  18340661 gattttaaaaacatttaatgaaatgtaaggactattcttaaaaggggcgcaacatgtaaggactaaaatcatatttaa 18340738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 30351716 - 30351792
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| |||||||||| ||||||| ||||||||||| ||||    | |||||||| ||| ||| |||||||||||    
T  30351716 attttaaaaatatttattgaaatgtagggactattctttaaaggagggtaaaatgtagggatcaataacatatttaa 30351792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 8e-26; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 17075488 - 17075382
Alignment:
Q  80 agtccttacattttgcatgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcct 179  Q
    |||||||||||||||| ||| ||||| |  |||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||| |    
T  17075488 agtccttacattttgcgtgactttaaaagcatttattaaaatataaggactattcttcaaagtcacgc-aaatgtagcgaccaaaaacatatttaatctt 17075390  T
Q  180 agaataat 187  Q
    | ||||||    
T  17075389 aaaataat 17075382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 32092461 - 32092391
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||    
T  32092461 aaaatgtaaggactattcttcaaagtcacgcaaaatatagggaccacaaacatatttaatcctaaaataat 32092391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 17075475 - 17075545
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||| |||| ||||||    
T  17075475 aaaatgtaaggactattcttcaaagtcacgcaaaatgtagggagcagaaacatatttaaccctaaaataat 17075545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 49053719 - 49053795
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| || ||||||| ||||| || ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  49053719 attttaaaaacatttattgaaatgcaatgactatttttcaaagtcacccaaaatgtatggaccaaaaacatatttaa 49053795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 5029610 - 5029681
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| |||| ||||||    
T  5029610 aaaatgtaaggactattcttcaaagtcacgcaaaatatagggaccaaaaaacatatttaaccctaaaataat 5029681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 18443620 - 18443708
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || ||||||||||| ||||||||||||||||||| |||| ||||||    
T  18443620 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgcaaaatgtaaggaccaaaaacatatttaaccctataataat 18443708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 28838604 - 28838527
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||||||||||||||| |||| |||||| | | |||||||||| |||||||||||||||||||    
T  28838604 gattttaaaaacatttattaaaatgtaaggattatttttcaaaatgatgcaaaatgtagggaccaaaaacatatttaa 28838527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 44803487 - 44803547
Alignment:
Q  116 taaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaa 175  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  44803487 taaaatgtaaggattattcttcaaagtcacgcaaaatgtagggaccaaaaaacatatttaa 44803547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 18152989 - 18152931
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||    
T  18152989 aaaatgtaaggactatttttcaaagtcacgtcaaatgtagggaccaaaaacatatttaa 18152931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 18443254 - 18443178
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||||||| |||| ||  |||||||||| |||||||||||||||||||    
T  18443254 gattttaaaaacatttattgaaatgtaaggactattct-caaaatcgtgcaaaatgtagggaccaaaaacatatttaa 18443178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 20544149 - 20544226
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||| |||||||||| || ||||||||||||||  || |||||||||||||||||||    
T  20544149 gattttaaaaacatttattgaaatgcaaggactattgtttaaagtcacgcaaaacttagggaccaaaaacatatttaa 20544226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 10466682 - 10466621
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatt 172  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| || |||||    
T  10466682 atttattgaaatgtaaggactatttttcaaagtcacgcaaaatgta-ggaccaagaatatatt 10466621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 28898107 - 28898026
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||| ||| ||||||| |||||||||| |||| || ||||||||||| ||||||||||||||||||| ||||    
T  28898107 gattttaaaaacattcattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaacccta 28898026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 1244454 - 1244530
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| |||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  1244454 gattttaaaaacattcattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 1244530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 29784390 - 29784466
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||||| |||||||| ||||||||| |||| ||  |||||| ||| |||||||||||||||||||    
T  29784390 gattttaaaaatatttattgaaatgtaaagactattct-caaaatcgtgcaaaacgtagggaccaaaaacatatttaa 29784466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 41298323 - 41298246
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  |||||||||| |||||||||||||||||||    
T  41298323 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 41298246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 41298687 - 41298763
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| |||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  41298687 gattttaaaaacattcattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 41298763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 11974891 - 11974827
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||| |||||||||| ||||| |||||||||  |||||||||||||||||| |||| ||||||    
T  11974891 taaggattattcttcaatgtcacacaaaatgtagagaccaaaaacatatttaaccctaaaataat 11974827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 22948741 - 22948793
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||||||||||||||||| |||||||||| |||  ||||||||||||||    
T  22948741 taaggactattcttcaaagtcatgcaaaatgtagggataaaaaacatatttaa 22948793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 23548834 - 23548770
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||| ||||||||| ||||||||||||||||   ||||||||||||||||| |||| ||||||    
T  23548834 taaggaatattcttcagagtcacgcaaaatgtagaaaccaaaaacatatttaaccctaaaataat 23548770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 23548846 - 23548922
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| | |||||||| |||| |||| |||||| |  |||||||||||||||||| |||||||||| ||||||||    
T  23548846 attttaaaagtatttattgaaatataagaactattttctaaagtcacgcaaaatgtagggaccaaaaatatatttaa 23548922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 30938673 - 30938590
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctaga 182  Q
    ||||||| || ||||| ||||||||| ||| ||||||| ||||   ||||||||||| |||| |||||||||||||||| ||||    
T  30938673 attttaaaaacatttaataaaatgtatggattattctttaaagaggcgcaaaatgtaaggactaaaaacatatttaatcataga 30938590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 18152835 - 18152753
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    ||||||||||| |||||  |||||||| ||||||||||||||||   ||||||||||| | ||  ||||||||||||| ||||    
T  18152835 gattttaagaacatttaacaaaatgtagggactattcttcaaaggggcgcaaaatgtaagaactgaaaacatatttaacccta 18152753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 884761 - 884684
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  |||||| ||| |||||||||||||||||||    
T  884761 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 884684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 1244090 - 1244013
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  |||||| ||| |||||||||||||||||||    
T  1244090 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 1244013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 6621016 - 6620967
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaa 166  Q
    |||||||||||||||||||| |||| ||||||||||||| |||| |||||    
T  6621016 aaaatgtaaggactattcttaaaagccacgcaaaatgtaaggacaaaaaa 6620967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 17075628 - 17075705
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||| ||||||||||||||||   ||||||||||| |||| ||||| ||||||||    
T  17075628 gattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaa 17075705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 20544321 - 20544402
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcct 179  Q
    |||||||| || ||||| | |||||||||||||||||||||||     ||||||| || |||| ||||||||||||||||||    
T  20544321 gattttaaaaacatttaatgaaatgtaaggactattcttcaaaaaggtgcaaaatataaggactaaaaacatatttaatcct 20544402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 28898471 - 28898548
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  |||||| ||| |||||||||||||||||||    
T  28898471 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 28898548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 30939575 - 30939652
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||| | ||||||| |||||||||||| || |  || |||||||| |||| ||||||||||||||    
T  30939575 gattttaaaaatatttaatgaaatgtagggactattcttcgaaatggcgtaaaatgtagggactaaaaacatatttaa 30939652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 32092307 - 32092230
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||| | ||||||||||||||||   ||||||||||| |||| ||||||||||||||    
T  32092307 gattttaaaaacatttaatgaaatgcagggactattcttcaaagaggcgcaaaatgtaaggactaaaaacatatttaa 32092230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 11974938 - 11974974
Alignment:
Q  139 aagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||||||||||| |||||||||||||||||||    
T  11974938 aagtcacgcaaaatgtagggaccaaaaacatatttaa 11974974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 20544138 - 20544086
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||| ||||||||||||||| |||||||||| | || ||||||||||||||    
T  20544138 taaggattattcttcaaagtcatgcaaaatgtaggaacaaaaaacatatttaa 20544086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 17075278 - 17075216
Alignment:
Q  118 aaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    ||||||| ||||||||||||||||   |||||||| || |||| |||||||||||||| ||||    
T  17075278 aaatgtagggactattcttcaaagcggcgcaaaatataaggactaaaaacatatttaacccta 17075216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 42750014 - 42750064
Alignment:
Q  125 aggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatattta 174  Q
    |||||||||||||||||| | |||||||||| ||||| |||||||||||||    
T  42750014 aggactattcttcaaagttatgcaaaatgtagggaccaaaaaacatattta 42750064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 33847944 - 33847868
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||  ||||||||| |||| || || ||||| || |||||||||||||||||||    
T  33847944 gattttaaaaacatttattgaaatgtagagactattct-caaaatcgcgtaaaatatagggaccaaaaacatatttaa 33847868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 29784012 - 29783937
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| || ||||||| |||| || |||||||||| |||| || | ||||||||| |||| ||||||||||||||    
T  29784012 attttaaaaacatttattgaaatatagggactattct-caaaatcgcacaaaatgtagggactaaaaacatatttaa 29783937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 33848309 - 33848384
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| || ||||||| ||||||| ||||||||||| ||| || || |||||||| ||| |||||||||| ||||    
T  33848309 attttaaaaacatttattgaaatgtagggactattctt-aaaatcgcgtaaaatgtagggaacaaaaacataattaa 33848384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 44803644 - 44803720
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| || ||||| | |||||||  |||||||||| ||||   ||||||||||| |||| ||||||||||||||    
T  44803644 attttaaaaacatttaatgaaatgtagagactattctttaaagaagcgcaaaatgtaaggactaaaaacatatttaa 44803720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 5e-24; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 17157766 - 17157862
Alignment:
Q  80 agtccttacattttgcatgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaat 176  Q
    |||||||||||||||  ||| ||||| |  |||||||||||||||  |||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  17157766 agtccttacattttgtgtgactttaaaatcatttattaaaatgtacagactattcttcaaagttacgcaaaatgtagggaccaaaaacatatttaat 17157862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 14712909 - 14712832
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  14712909 gattttaaaaacatttattgaaatgtaaggactatttttcaaagtgacgcaaaatgtagggaccaaaaacatatttaa 14712832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 17157779 - 17157709
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| |||| ||||||    
T  17157779 aaaatgtaaggactattcttcaaagtcacacaaaatgtagggatcaaaaacatatttaaccctaaaataat 17157709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 211581 - 211651
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||||| |||| ||||||    
T  211581 aaaatgtaaggactattcttcaaagttacgcaaaatgtagggacaaaaaatatatttaaccctaaaataat 211651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 34984555 - 34984631
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  34984555 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 34984631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 7645845 - 7645909
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||| ||||||||||||||| |||||||||  ||||||||||||||||||| |||| ||||||    
T  7645845 taaggattattcttcaaagtcaagcaaaatgtcgggaccaaaaacatatttaaccctaaaataat 7645909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 17157854 - 17157921
Alignment:
Q  108 atatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| | ||||||| |||||||||||||||||  ||||||||||| |||| ||||||||||||||    
T  17157854 atatttaatgaaatgtagggactattcttcaaagtggcgcaaaatgtaaggactaaaaacatatttaa 17157921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 21113279 - 21113204
Alignment:
Q  100 ttttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||| |||||||||| ||||| || ||||||| ||||||||||||||||| ||| ||| |||| ||||||||||    
T  21113279 ttttaaaaatatttattgaaatgcaatgactatttttcaaagtcacgcaaaacgtagggatcaaagacatatttaa 21113204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 14257225 - 14257144
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| ||||||||||||||||||| ||||    
T  14257225 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacccta 14257144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 33107008 - 33106926
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  |||||| ||| ||||||||||||||||||||||||    
T  33107008 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaatccta 33106926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 6162699 - 6162775
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||  ||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  6162699 gattttaaaaacatttattgaaatgtagagactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 6162775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 7646005 - 7646070
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| ||||||||||||||||||||||||   | ||||||||| |||| ||||||||||||||    
T  7646005 atttattgaaatgtaaggactattcttcaaaggagcacaaaatgtaaggactaaaaacatatttaa 7646070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 33107372 - 33107448
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| |||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  33107372 gattttaaaaacattcattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 33107448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 25932313 - 25932242
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaatcctagaataat 187  Q
    |||||||||  ||||||||||||||||||||||||| || ||||| ||||| |||||||| |||| ||||||    
T  25932313 aaaatgtaataactattcttcaaagtcacgcaaaatatagggaccaaaaaatatatttaaccctaaaataat 25932242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 8710351 - 8710433
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||| | ||||||||||||||||||||||||    ||||||| || |||| |||||||||||||| ||||    
T  8710351 gattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaacccta 8710433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 20522166 - 20522243
Alignment:
Q  97 tgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||| || ||||||| ||||||| ||||||||||||||| ||   ||||||||| | |||||||||||||||||    
T  20522166 tgattttaaaaacatttattgaaatgtagggactattcttcaaaatc-gtcaaaatgtaggaaccaaaaacatatttaa 20522243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 211500 - 211443
Alignment:
Q  118 aaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| ||||||||||||||||   ||||||||||| |||| ||||||||||||||    
T  211500 aaatgtacggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaa 211443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 8709605 - 8709676
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || | ||||||||||||||||||||||  ||    |||||||||||||| |||||||||||||||||||    
T  8709605 gattttaaaaacagttattaaaatgtaaggactatt--tc----tcacgcaaaatgtagggaccaaaaacatatttaa 8709676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 19595660 - 19595737
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||||| ||||||| ||||||||||| |||     ||||||||||||||| || |||||||||||    
T  19595660 gattttaaaaatatttattgaaatgtagggactattctttaaaaaggtgcaaaatgtatggactaataacatatttaa 19595737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 20824242 - 20824166
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| ||  | |||||||| |||||||||||||||||||    
T  20824242 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgtgtaaaatgtagggaccaaaaacatatttaa 20824166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 20824606 - 20824682
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| ||| |||||| |||| || || |||||||| |||||||||||||||||||    
T  20824606 gattttaaaaacatttattgaaatgtagggattattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 20824682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 4510267 - 4510185
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||| | ||||||| |||||||||||||||    || |||||||| |||| |||||||||||||| ||||    
T  4510267 gattttaaaaacatttaatgaaatgtagggactattcttcaaataggcgtaaaatgtaaggactaaaaacatatttaacccta 4510185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 5974090 - 5974008
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||| | ||||||| ||||||||||||||||    ||||||| || |||| |||||||||||||| ||||    
T  5974090 gattttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaacccta 5974008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 5975910 - 5975834
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || |||||||||||||| |||||||||||||||||    | |||||||  |||| ||||||||||||||    
T  5975910 gattttaaaaacatttattaaaatgt-aggactattcttcaaagaggtggaaaatgtgaggactaaaaacatatttaa 5975834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 5975928 - 5975985
Alignment:
Q  130 tattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||| |||||| || ||||||||||  ||| |||||||||||||||||||| ||||||    
T  5975928 tattattcaaaatcgcgcaaaatgttgggatcaaaaacatatttaatcctaaaataat 5975985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 15147796 - 15147720
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| ||| ||||||  ||| || || |||||||| |||||||||||||||||||    
T  15147796 gattttaaaaacatttattgaaatgtagggattattctctaaa-tcgcgtaaaatgtagggaccaaaaacatatttaa 15147720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 17157625 - 17157548
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||| | ||||||| |||||||||||||| |   || |||||||| | || ||||||||||||||    
T  17157625 gattttaaaaatatttaatgaaatgtatggactattcttcaatgaggcgtaaaatgtaagaactaaaaacatatttaa 17157548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 211741 - 211809
Alignment:
Q  107 aatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| | ||||||| |||||||||||||||    ||||||||||| |||  ||||||||||||||    
T  211741 aatatttaatgaaatgtagggactattcttcaaataggcgcaaaatgtaaggattaaaaacatatttaa 211809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 8e-23; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 27013646 - 27013584
Alignment:
Q  113 tattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  27013646 tattaaaatgtaaggactattcttcaaaatcacgcaaaatgtaaggaccaaaaacatatttaa 27013584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 22814530 - 22814459
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    
T  22814530 aaaatgtaaggactattcttcaaagtcacgcaaaatgtagggacctaaaaacatatttaaccctaaaataat 22814459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 51471555 - 51471630
Alignment:
Q  80 agtccttacattttgcatgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgta 155  Q
    |||||||||||||||| ||| ||||| |||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  51471555 agtccttacattttgcgtgaatttaaaaatatttattcaaatgtaaggaccgttcttcaaagtcatgcaaaatgta 51471630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 51471568 - 51471510
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||    
T  51471568 aaaatgtaaggactattcttcaaagtcacacaaaatatagggaccaaaaacatatttaa 51471510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 37172331 - 37172256
Alignment:
Q  100 ttttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||| || |||| || |||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||    
T  37172331 ttttaaaaacatttgttgaaatctaaggattatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaa 37172256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 4199897 - 4199973
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  4199897 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 4199973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 25770573 - 25770496
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||| ||||||| |||||| |||||||||||||| |||  ||||||||||||||    
T  25770573 gattttaaaaacatttattgaaatgtaaagactatttttcaaaatcacgcaaaatgtaaggattaaaaacatatttaa 25770496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 44504344 - 44504267
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||| |||||||| | ||||||||||||||||||||| | | |||||||||||||||    
T  44504344 gattttaaaaacatttattgaaatgcaaggactaattttcaaagtcacgcaaaatgtaagaatcaaaaacatatttaa 44504267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 48867729 - 48867641
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataa 186  Q
    |||||||| |||||||||| ||||||| |||||||| || |||||  ||||||||||| |||| || ||||||||||| |||| |||||    
T  48867729 gattttaaaaatatttattgaaatgtagggactattatttaaagtagcgcaaaatgtagggactaataacatatttaaccctaaaataa 48867641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 54588535 - 54588451
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtc-acgcaaaatgtatggaccaaaaacatatttaatcctaga 182  Q
    ||||||| || ||||||| ||||||| ||||||||||||||||||  |  |||||||| ||||| ||||||||||||||||||||    
T  54588535 attttaaaaacatttattgaaatgtatggactattcttcaaagtctgccaaaaatgtagggaccgaaaacatatttaatcctaga 54588451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 38485927 - 38485859
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||| ||| |||||||||||||||||  |||||||| ||||||||||||||||||||| |||| ||||||    
T  38485927 aaaatataatgactattcttcaaagtc--gcaaaatgcatggaccaaaaacatatttaaccctaaaataat 38485859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 43933602 - 43933673
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaatcctagaataat 187  Q
    ||||||||| ||||||||||||||||| |||||||| || ||||| |||||||||||||| |||| ||||||    
T  43933602 aaaatgtaaagactattcttcaaagtcgcgcaaaatatagggaccaaaaaacatatttaaccctaaaataat 43933673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 51588477 - 51588555
Alignment:
Q  99 attttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcc 178  Q
    ||||||| || ||||||||||||||| ||| ||||||||||| |||||||||||| | |||| || ||||||||||||||    
T  51588477 attttaaaaacatttattaaaatgta-ggattattcttcaaaatcacgcaaaatgcagggactaataacatatttaatcc 51588555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 4199531 - 4199450
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| |||| ||||||||||||| |||| ||  |||||||||| ||||||||||||||||||| ||||    
T  4199531 gattttaaaaacatttattgaaatataaggactattct-caaaatcgtgcaaaatgtagggaccaaaaacatatttaacccta 4199450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 27475468 - 27475387
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||| ||| ||||||| |||||||||| |||| || ||||||||||| ||||||||||||||||||| ||||    
T  27475468 gattttaaaaacattcattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaacccta 27475387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 9218364 - 9218429
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| ||||| ||  |||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  9218364 atttattgaaatgcaaatactatttttcaaagtcacgcaaaatgtagggagcaaaaacatatttaa 9218429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 25770583 - 25770648
Alignment:
Q  122 gtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||| ||||||||||||||||||||||||||||  || |||||| |||||||| |||| ||||||    
T  25770583 gtaagaactattcttcaaagtcacgcaaaatgtagagatcaaaaatatatttaaccctaaaataat 25770648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 34949834 - 34949758
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| |||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  34949834 gattttaaaaacattcattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 34949758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 36899332 - 36899256
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| |||||||||||||||||||    
T  36899332 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 36899256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 45539651 - 45539727
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| ||||||||||| ||| || || |||||||| |||||||||||||||||||    
T  45539651 gattttaaaaacatttattgaaatgtagggactattcttaaaa-tcgcgtaaaatgtagggaccaaaaacatatttaa 45539727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 48868598 - 48868675
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||| ||||||||  ||||||||||| |||| || |||||||||||    
T  48868598 gattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaa 48868675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 26741154 - 26741210
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaa 166  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||    
T  26741154 atttattgaaatgtaaggattatttttcaaagtcacgcaaaatgtagggagcaaaaa 26741210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 45728337 - 45728405
Alignment:
Q  107 aatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| | ||||||| ||||||||||||||||  || ||||||||| |||| ||||||||||||||    
T  45728337 aatatttaatgaaatgtatggactattcttcaaagggacacaaaatgtaaggactaaaaacatatttaa 45728405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 2388710 - 2388629
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| |||||||  ||||||||| |||| || || |||||||| ||||||||||||||||| ||||||    
T  2388710 gattttaaaaacatttattgaaatgtagagactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttgatccta 2388629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 22814375 - 22814289
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaat 184  Q
    |||||||| || ||||| | ||||||| ||||||||||||||||   ||||||||||| | |  |||||||||||||| ||||||||    
T  22814375 gattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaagaattaaaaacatatttaaccctagaat 22814289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 42606722 - 42606803
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| |||||||||| ||||||| |||||||||| |||| |  |  |||||||| ||||||||||||||||||| ||||    
T  42606722 gattttaaaaatatttattgaaatgtagggactattct-caaaattgcataaaatgtagggaccaaaaacatatttaacccta 42606803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 44504397 - 44504479
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||| | ||||||||||||||||||||||||    |||||||||| |||| ||||||| |||||| ||||    
T  44504397 gattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatgtaaggactaaaaacacatttaacccta 44504479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 46690124 - 46690205
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||| ||| |||||| |||| || || |||||||| ||||||||||||||||||| ||||    
T  46690124 gattttaaaaacatttattgaaatgtagggattattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacccta 46690205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 132070 - 132147
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||||||||||||||||||||    |||||||||| |||| ||| ||||||||||    
T  132070 gattttaaaaacatttaatgaaatgtaaggactattcttcaaaggagtgcaaaatgtaaggactaaatacatatttaa 132147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 7248500 - 7248577
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| ||||||||||||||||| ||||||||| || ||||  | | |||||||| |||  ||||||||||||||    
T  7248500 gattttaaaaatatttattaaaatgtgaggactattttttaaagggaggtaaaatgtagggattaaaaacatatttaa 7248577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 9218522 - 9218611
Alignment:
Q  96 atgattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaata 185  Q
    |||||||||| || ||||| | |||| || ||||||||||||||||   |||||||||||  ||| |||||||||||||| |||| ||||    
T  9218522 atgattttaaaaacatttaatgaaatatagggactattcttcaaaggagcgcaaaatgtaatgactaaaaacatatttaaccctaaaata 9218611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 13637791 - 13637868
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||| | |||||||  |||||||||||||||   ||||||||||| |||| | ||||||||||||    
T  13637791 gattttaaaaatatttaatgaaatgtagagactattcttcaaaggggcgcaaaatgtaaggactagaaacatatttaa 13637868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 20826807 - 20826730
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||||||||||||  | ||| | | | |||||||| |||||||||||||||||||    
T  20826807 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggaaaaatgtagggaccaaaaacatatttaa 20826730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 22406921 - 22406844
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  |||||| ||| |||||||||||||||||||    
T  22406921 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtaaggaccaaaaacatatttaa 22406844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 22407285 - 22407361
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| |||||||| |||||| |  ||||||||||| |||||||||||||||||||    
T  22407285 gattttaaaaacattcattgaaatgtagggactatt-ttcaaaattgcgcaaaatgtagggaccaaaaacatatttaa 22407361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 42606358 - 42606282
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| |||||||||||| ||||||    
T  42606358 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacaaatttaa 42606282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 45539287 - 45539211
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| ||||||||||| ||| || || |||||||| |||||||||||||| ||||    
T  45539287 gattttaaaaacatttattgaaatgtagggactattctt-aaaatcgcgtaaaatgtagggaccaaaaacataattaa 45539211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 37172344 - 37172396
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||||| |||||||||||||||||| || |||| ||||||| ||||||    
T  37172344 taaggactatttttcaaagtcacgcaaaatatagggactaaaaacaaatttaa 37172396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 50732304 - 50732229
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatattt 173  Q
    |||||||| |||||||| | ||||||| |||||||| |||||||   ||||||||||| |||  ||||||||||||    
T  50732304 gattttaaaaatatttaatgaaatgtatggactatttttcaaaggagcgcaaaatgtaaggataaaaaacatattt 50732229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 50780551 - 50780626
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatattt 173  Q
    |||||||| |||||||| | ||||||| |||||||| |||||||   ||||||||||| |||  ||||||||||||    
T  50780551 gattttaaaaatatttaatgaaatgtatggactatttttcaaaggagcgcaaaatgtaaggataaaaaacatattt 50780626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 9218041 - 9217995
Alignment:
Q  130 tattcttcaaagtcac-gcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||    
T  9218041 tattcttcaaagttacagcaaaatgtagggaccaaaaacatatttaa 9217995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 13637708 - 13637670
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgta 155  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  13637708 aaaatgtaagaactattattcaaagtcacgcaaaatgta 13637670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 38485776 - 38485698
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaat 176  Q
    |||||||| || || || ||||||||| ||||||||||||||||   | ||||||||| |||| |||| ||||||||||    
T  38485776 gattttaaaaacatataataaaatgtatggactattcttcaaagaggcacaaaatgtaaggactaaaatcatatttaat 38485698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 131948 - 132025
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || | ||||| |||||||||||||||  |||||||||| |||| ||||| | |||||||| | ||||||    
T  131948 gattttaaaaacacttattgaaatgtaaggactatatttcaaagtcatgcaacatgtaggaaccaaaaataaatttaa 132025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 2389074 - 2389150
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||||||||||| |||||||||| |||| |  |  ||||| || |||||||||||||||||||    
T  2389074 gattttaaaaacatttattaaaatgtagggactattct-caaaattgcataaaatatagggaccaaaaacatatttaa 2389150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 9217899 - 9217822
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | ||||||| ||||||||||||||||   |||||||| ||||||| ||||  ||||||||    
T  9217899 gattttaaaaacatttaatgaaatgtagggactattcttcaaagcagcgcaaaatatatggactaaaacgatatttaa 9217822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 34950198 - 34950275
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| |   |||||| ||| |||||||||||||||||||    
T  34950198 gattttaaaaacatttattgaaatgtaaggactaattctcaaaattgtgcaaaacgtagggaccaaaaacatatttaa 34950275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 43933519 - 43933442
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||| | ||||||| |||||||||||||||    | ||||||||| |||| ||||| ||||||||    
T  43933519 gattttaaaaatatttaatgaaatgtagggactattcttcaaacgggcacaaaatgtaaggactaaaaatatatttaa 43933442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 46689760 - 46689684
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || |  |||||||| | |||||||||||||||||    
T  46689760 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcataaaatgtaggaaccaaaaacatatttaa 46689684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 3e-22; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 3591175 - 3591252
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||    
T  3591175 gattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcacaatgtagggaccaaaaacatatttaa 3591252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 50359289 - 50359355
Alignment:
Q  109 tatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||    
T  50359289 tatttattgaaatgtaaggactatttttcaaagtcacgcagaatgtagggaccaaaaacatatttaa 50359355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 36793585 - 36793662
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || |||||||||||||||  |||||||||||||||||||||||||| || |||| ||||||||||||||    
T  36793585 gattttaaaaacatttattaaaatgtagagactattcttcaaagtcacgcaaaatatagggactaaaaacatatttaa 36793662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 9880718 - 9880647
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| |||| ||||||    
T  9880718 aaaatgtaaggactattcttcaaagtaacgcaaaatgtagggaccaaaaaacatatttaaccctaaaataat 9880647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 18180131 - 18180054
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||||| ||||| ||||||| || |||||||||||||||||||||  ||| ||||||||||||||    
T  18180131 gattttaaaaatatttattgaaatgcaaggactgtttttcaaagtcacgcaaaatgtagtgactaaaaacatatttaa 18180054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 172
Target Start/End: Complemental strand, 5173008 - 5172922
Alignment:
Q  87 acattttgcatgattttaagaatatttattaaaatgtaa-ggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatt 172  Q
    ||||||||| |||  |||| || |||||||||||||||| ||||||||||| |||||||||||||||||| | | ||||||||||||    
T  5173008 acattttgcgtgaccttaaaaacatttattaaaatgtaaaggactattctttaaagtcacgcaaaatgtaggaatcaaaaacatatt 5172922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 42723184 - 42723114
Alignment:
Q  116 taaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataa 186  Q
    |||||| ||| |||||||||||||||||| |||||||||| |||| |||||||||||||| |||| |||||    
T  42723184 taaaatataaagactattcttcaaagtcaagcaaaatgtagggacaaaaaacatatttaaccctaaaataa 42723114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 19895652 - 19895575
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||| || ||||||| |||||||||||||||||| ||  ||||||||||||||||||    
T  19895652 gattttaaaaacatttattgaaatgcaaagactatttttcaaagtcacgcaaaatatagagaccaaaaacatatttaa 19895575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 47541679 - 47541751
Alignment:
Q  116 taaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||||||||| ||||| |||||||||  | ||||| ||||||||||||||||||| ||||||    
T  47541679 taaaatgtaaggactattctttaaagttacgcaaaatagagggaccaaaaaacatatttaatcctaaaataat 47541751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 4288296 - 4288359
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||| |||||||  |||| ||||||||| |||||||| ||||||||||||||||||||||||    
T  4288296 aaaatgcaaggactgctctttaaagtcacgtaaaatgtagggaccaaaaacatatttaatccta 4288359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 9122763 - 9122682
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||||||||||||| ||||| || || |||||||  ||||||||||||||||||| ||||    
T  9122763 gattttaaaaacatttattgaaatgtaaggactattc-tcaaaatcgcgtaaaatgtggggaccaaaaacatatttaacccta 9122682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 32266561 - 32266480
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| ||||||||||||||||||| ||||    
T  32266561 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacccta 32266480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 40124154 - 40124073
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| ||| | |||||||| ||||||||||||||||||| ||||    
T  40124154 gattttaaaaacatttattgaaatgtagggactattct-caaaatcaagtaaaatgtaaggaccaaaaacatatttaacccta 40124073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 5683431 - 5683488
Alignment:
Q  130 tattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||||| || ||||||    
T  5683431 tattcttcaaagtcacgtaaaatgtagggactaaaaacatatttaatcttaaaataat 5683488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 17968115 - 17968039
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| |||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  17968115 gattttaaaaacattcattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 17968039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 18180142 - 18180191
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatt 172  Q
    |||||| |||||||||||||||||||||||||| |||| |||||||||||    
T  18180142 taaggattattcttcaaagtcacgcaaaatgtaaggactaaaaacatatt 18180191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 31436242 - 31436295
Alignment:
Q  119 aatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatt 172  Q
    ||||| |||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  31436242 aatgttaggactattcttcaaagtcacgtaaaatgtagggaccgaaaacatatt 31436295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 45230572 - 45230648
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| |||||||||| |||| || ||||||||||| |||||||||||||||||||    
T  45230572 gattttaaaaacattcattgaaatgtagggactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 45230648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 47410865 - 47410941
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| |||||||||||||||||||    
T  47410865 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 47410941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 17968479 - 17968561
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| |||||||| ||||| |  ||||| ||  |||||| ||||||||||||||||||||||| ||||    
T  17968479 gattttaaaaacatttattgaaatgtaaagactaattctcaaaatcgtgcaaaacgtatggaccaaaaacatatttaacccta 17968561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 30427752 - 30427670
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| ||  |||||| ||| ||||||||||||||||||| ||||    
T  30427752 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacccta 30427670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 32266925 - 32267006
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||| ||| |||||| |||| || || |||||||| ||||||||||||||||||| ||||    
T  32266925 gattttaaaaacatttattgaaatgtagggattattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaacccta 32267006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 3591348 - 3591425
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| ||||||||| |||||||||||||||    ||||||||||| |||| ||||| ||||||||    
T  3591348 gattttaaaaacatttaataaaatgtatggactattcttcaaatgagcgcaaaatgtaaggactaaaaatatatttaa 3591425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 5683413 - 5683336
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||| |||||| ||| |||||| ||||||||||||||  |||||| || ||||||||    
T  5683413 gattttaaaaacatttattgaaatgcaaggacaatttttcaaattcacgcaaaatgtagagaccaataatatatttaa 5683336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 5683572 - 5683649
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||| | ||||||| |||||||||||||||   ||| ||||| || |||| ||||||||||||||    
T  5683572 gattttaaaaatatttaatgaaatgtagggactattcttcaaaaagacgtaaaatataaggactaaaaacatatttaa 5683649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 18180289 - 18180366
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| ||||||||| |||||||||||||||||  |||||||| ||  ||  ||||||||||||||    
T  18180289 gattttaaaaacatttaataaaatgtatggactattcttcaaagtggcgcaaaatataaagattaaaaacatatttaa 18180366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 19976243 - 19976162
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcct 179  Q
    |||||||| || ||||| |||||  |||| ||||||||||||||   |||||||||||  ||| ||||||||||||||||||    
T  19976243 gattttaaaaacatttaataaaaaataagaactattcttcaaagaagcgcaaaatgtaacgactaaaaacatatttaatcct 19976162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 30428116 - 30428192
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| ||| ||||||| | |||||||| |||| || ||||||||||| |||||||||||||||||||    
T  30428116 gattttaaaaacattcattgaaatgtaggaactattct-caaaatcgcgcaaaatgtagggaccaaaaacatatttaa 30428192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 37717807 - 37717883
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| ||  |||||| |||||||||||||||| ||||||||  || |||||||| |||| ||||||||||||||    
T  37717807 gattttaaaaacctttattgaaatgtaaggactatt-ttcaaagttgcgtaaaatgtagggactaaaaacatatttaa 37717883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 45664766 - 45664689
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || |||||||||||||||  ||||||||||||||    || |||||||| |||| ||||||||||||||    
T  45664766 gattttaaaaacatttattaaaatgtagagactattcttcaaatgagcgtaaaatgtagggactaaaaacatatttaa 45664689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 45665952 - 45666033
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcct 179  Q
    |||||||| |||||||||| ||| ||||| |||||| || ||||   | ||||||||| ||||||| |||||||||||||||    
T  45665952 gattttaaaaatatttattgaaacgtaagaactattttttaaaggagcacaaaatgtagggaccaataacatatttaatcct 45666033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 19895663 - 19895715
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||||||||||||||||  |||||||||| ||| |||||| ||||||||    
T  19895663 taaggactattcttcaaagtcttgcaaaatgtagggatcaaaaatatatttaa 19895715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 6751281 - 6751222
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgtatggacc-aaaaacatatttaa 175  Q
    |||||||||| ||||||||||||||| ||||||||| ||  |||| ||||||||||||||    
T  6751281 aaaatgtaagaactattcttcaaagttacgcaaaatatagagaccaaaaaacatatttaa 6751222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 1500992 - 1501074
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||| | ||||||| |||||||||||||||    |||||||| || |||| |||||||||||||| ||||    
T  1500992 gattttaaaaacatttaatgaaatgtagggactattcttcaaaagagcgcaaaatatagggactaaaaacatatttaacccta 1501074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 12868512 - 12868430
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| |||||||||| ||||||| | ||||||||| ||||    | |||||||| ||||||| ||||||||||| ||||    
T  12868512 gattttaaaaatatttattgaaatgtaggaactattctttaaaggagggtaaaatgtagggaccaataacatatttaacccta 12868430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 46802400 - 46802319
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| ||  |||||| ||||||| |||||||||| |||| || || |||||||  ||||||||||||||||||| ||||    
T  46802400 gattttaaaaacttttattgaaatgtagggactattct-caaaatcgcgtaaaatgtggggaccaaaaacatatttaacccta 46802319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 48155135 - 48155173
Alignment:
Q  117 aaaatgtaaggactattcttcaaagtcacgcaaaatgta 155  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  48155135 aaaatgtaaggactatttttcaaaatcacgcaaaatgta 48155173  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 5683220 - 5683163
Alignment:
Q  118 aaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    ||||||| |||||||| |||||||  |||||||||||| |||  ||||||||||||||    
T  5683220 aaatgtagggactatttttcaaagagacgcaaaatgtaaggattaaaaacatatttaa 5683163  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 9880563 - 9880486
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||| | |||||||  |||| ||||||||||  | |||||||||| |||| ||||||||||||||    
T  9880563 gattttaaaaacatttaatgaaatgtagagacttttcttcaaagggatgcaaaatgtaaggactaaaaacatatttaa 9880486  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 12869665 - 12869742
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| ||||||||||| ||||    | ||||| || |||||||||||||||||||    
T  12869665 gattttaaaaacatttattgaaatgtagggactattctttaaaggagggtaaaatatagggaccaaaaacatatttaa 12869742  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 45230208 - 45230131
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||| |  ||||| |   |||||| ||| |||||||||||||||||||    
T  45230208 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatagtgcaaaacgtagggaccaaaaacatatttaa 45230131  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 4288467 - 4288523
Alignment:
Q  119 aatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||| ||||||||||||||||   |||||||| || |||| ||||||||||||||    
T  4288467 aatgtagggactattcttcaaaggggcgcaaaatataaggactaaaaacatatttaa 4288523  T

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Target: scaffold0009 (Bit Score: 50; Significance: 8e-20; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 107974 - 107897
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| |||||||||||||||| |||||| ||||| |||||||| |||||||||||||||||||    
T  107974 gattttaaaaacatttattgaaatgtaaggactatttttcaaaatcacggaaaatgtagggaccaaaaacatatttaa 107897  T

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Target: scaffold0009; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 107985 - 108049
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  107985 taaggattattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaaccctaaaataat 108049  T

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Target: scaffold0009; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 107801 - 107724
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||   |||||| |||| || | ||||||||||||||    
T  107801 gattttaaaaatatttattgaaatgtagggactattcttcaaaggagcgcaaagtgtaaggtctaaaaacatatttaa 107724  T

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Target: scaffold0063 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 35055 - 35119
Alignment:
Q  123 taaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    |||||||||||||||||||||||| ||||| || ||||||||||||||| ||| |||| ||||||    
T  35055 taaggactattcttcaaagtcacgtaaaatctagggaccaaaaacatatgtaaccctacaataat 35119  T

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Target: scaffold0063; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 35203 - 35280
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||| | |||||||||  |||||||||||||||  |||||||||||| |||| ||||||||||||||    
T  35203 gattttaaaaacattcaataaaatgtagagactattcttcaaagggacgcaaaatgtaaggactaaaaacatatttaa 35280  T

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Target: scaffold0063; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 35032 - 34967
Alignment:
Q  110 atttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatg-gaccaaaaacatatttaa 175  Q
    ||||||||||| ||||||| ||||  |||||||||||||||||| ||| || |||||||||||||||    
T  35032 atttattaaaacgtaaggaatatttctcaaagtcacgcaaaatg-atgagatcaaaaacatatttaa 34967  T

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Target: scaffold0148 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 33005 - 33087
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||||||||||||  | ||| | | |||||||||| ||||||||||||||||||| ||||    
T  33005 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaaaaacatatttaacccta 33087  T

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Target: scaffold0148; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 29353 - 29271
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatccta 180  Q
    |||||||| || ||||||| ||||||||||||||||  | ||| | | |||||||||| ||||||| ||||||||||| ||||    
T  29353 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaataacatatttaacccta 29271  T

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Target: scaffold0085 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 39863 - 39939
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| |||||||||| |||| || || |||||||| |||||||||||||||||||    
T  39863 gattttaaaaacatttattgaaatgtagggactattct-caaaatcgcgtaaaatgtagggaccaaaaacatatttaa 39939  T

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Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 39499 - 39423
Alignment:
Q  98 gattttaagaatatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 175  Q
    |||||||| || ||||||| ||||||| ||| |||||| |||| || |  |||||||| |||||||||||||||||||    
T  39499 gattttaaaaacatttattgaaatgtagggattattct-caaaatcgcataaaatgtagggaccaaaaacatatttaa 39423  T

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Target: scaffold0933 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 711 - 654
Alignment:
Q  130 tattcttcaaagtcacgcaaaatgtatggaccaaaaacatatttaatcctagaataat 187  Q
    ||||||||||||||||||||||| || |||| ||  |||||||||| |||| ||||||    
T  711 tattcttcaaagtcacgcaaaatatagggacaaactacatatttaaccctaaaataat 654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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