View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14764_high_2 (Length: 224)
Name: NF14764_high_2
Description: NF14764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14764_high_2 |
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Alignment Details
Target: chr6 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 15 - 210
Target Start/End: Original strand, 3816022 - 3816226
Alignment:
| Q |
15 |
atagggaggtgagtcaacatcaaagctgacataattgggaccatgcaaatgcagaaaaatgtgatggagtaagaggcattgggactatgttttatggaaa |
114 |
Q |
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| T |
3816022 |
atagggaggtgagtcaacatcaaagctgacataattgggaccatgcaaatgcagaaaaatgtgatggagtaagaggcattgggactatgttttatggaaa |
3816121 |
T |
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| Q |
115 |
atgtgcttttcaatatgaatcaaatgcatttactattttaccatatgctactgttcaaa---------tcaaatggaatcattgtgagttttgaggagta |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
3816122 |
atgtgcttttcaatatgaatcaaatgcatttactattttaccatatgctactgttcaaatcaaatgagtcaaatggaatcattgtgagttttgaggagta |
3816221 |
T |
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| Q |
206 |
cttac |
210 |
Q |
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||||| |
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| T |
3816222 |
cttac |
3816226 |
T |
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