View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14768_high_3 (Length: 370)
Name: NF14768_high_3
Description: NF14768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14768_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 355
Target Start/End: Original strand, 38124169 - 38124523
Alignment:
| Q |
1 |
taaattgatttggctatgtatttttgatgagtttgtaattataaggttcactgggattttcaggtaataaggggattggatcagggaattttagggggtg |
100 |
Q |
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| T |
38124169 |
taaattgatttggctatgtattttttatgagtttgtaattataaggttcaatgggattttcaggtaataaggggattggatcagggaattttagggggtg |
38124268 |
T |
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| Q |
101 |
aaggagtacctccaatgcggataggtattaaatttaatttgaagtgtttaagtttcattgttcatagtatatgacactttctaaatttatttactatttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38124269 |
aaggagtacctccaatgcggataggtattaaatttaatttgaagtgtttaagtttcattgttcatagtatatgacactttctaaatttatttactatttt |
38124368 |
T |
|
| Q |
201 |
tacttaggtgggaaacgcaaactcacgattcctccattgttagcgtatggtcctgaacctgcaggctgtttctcaggtctcattcattattaattattac |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38124369 |
tacttaggtgggaaacgcaaactcacgattcctccattgttagcgtatggtcctgaacctgcaggctgtttctcaggtctcattcattattaattattac |
38124468 |
T |
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| Q |
301 |
tgtgttattatgtaatttgctgctaaacatggataactactttaatcaaacctga |
355 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
38124469 |
tgtgttattatgtaatttgctactaaacatggataactactttaatcaaacctga |
38124523 |
T |
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