View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1476_high_2 (Length: 330)
Name: NF1476_high_2
Description: NF1476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1476_high_2 |
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Alignment Details
Target: chr3 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 7929606 - 7929293
Alignment:
| Q |
1 |
catttttctttgattaagcttaatgatttttgtatccgattttgagacgccattcaaatttcttagctgttttttcatatgttttgtcttgtctgaacct |
100 |
Q |
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| T |
7929606 |
catttttctttgattaagcttaattgtttttgtatccgattttgagacgccattcaaatttcttagctgttttttcatatgatttgtcttgtctgaacct |
7929507 |
T |
|
| Q |
101 |
tagttcttttcatcctaattgatgcattcacatgtgactcatatataggtccaagacattcagctgaagtattagttgattccaaatttcagatatcaac |
200 |
Q |
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| T |
7929506 |
tacttcttttcatcctaattgatgcattcacatgtgactcatatataggtccaagacattcagctgaagtagtagttgattccaaatttcagatatcaac |
7929407 |
T |
|
| Q |
201 |
caagcgtgaaaataattcaatgattttcaagaaaccaataggcaaggaaattccccttccacctaagtctgctgatactaaacatgagaatcgagcaaaa |
300 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7929406 |
caagcgtgaaaatgtttcaatgattttcaagaaaccaataggcaaggaaattccccttccacctaagtctgctgatactaaacatgagaatcgagcaaaa |
7929307 |
T |
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| Q |
301 |
aagactactctccc |
314 |
Q |
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|||||||||||||| |
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| T |
7929306 |
aagactactctccc |
7929293 |
T |
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