View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1476_low_7 (Length: 250)
Name: NF1476_low_7
Description: NF1476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1476_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 7929579 - 7929825
Alignment:
| Q |
1 |
aacaattaagcttaatcaaagaaaaatgttaccggatatcgatacagtaggacctccaggtgattcaataatttcaattagttcaaccacggttgagcca |
100 |
Q |
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| T |
7929579 |
aacaattaagcttaatcaaagaaaaatgttaccggatattgatagagtagaacctccaggtgattcaataatttcaattagttcaaccacggttgagcca |
7929678 |
T |
|
| Q |
101 |
tatgaagatgnnnnnnnngacagtat------------gggatcaaaccaaccatcaaacagacagtaccgaccggttcggtccagtttttacaacattg |
188 |
Q |
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| T |
7929679 |
tatgaagaa-aaaaaaaagacagtattccggtacaattgggatcaaaccaaccatcaaacagacagtaccgaccggttcggtccagtttttacaacattg |
7929777 |
T |
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| Q |
189 |
gttaacacgcataacaaggaaacctcaaaatttgttctgttttttccc |
236 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7929778 |
gttaacacgcataacaaggaaacctcaaaatttgttctgttttttccc |
7929825 |
T |
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