View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14771_high_10 (Length: 420)
Name: NF14771_high_10
Description: NF14771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14771_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 1 - 399
Target Start/End: Original strand, 31896481 - 31896879
Alignment:
| Q |
1 |
cactctagataacctcctcccatgttgtacacatccttaaacccctgccacacaacaaattgagaatgcagaatgaatagaaattgaggagttaagattt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
31896481 |
cactctagataacctcctcccatgttgtacacatccttaaacccctgccacacaacaaattgagaatgcagaatgtatagaaattgaggagttaagattt |
31896580 |
T |
|
| Q |
101 |
catattcaaatgatttaattttcatgaagaatgtagtgaagttgacaggaattaacatacttcagctagaagatcagcagttgcatacacagatctcact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31896581 |
catattcaaatgatttaattttcatgaagaatgtagtgaagttgacaggaattaacatacttcagctagaagatcagcagttgcatacacagatctcact |
31896680 |
T |
|
| Q |
201 |
ccactttggcaaccctgaaatacaaaatttggttttaatagtttgcaatttagcagtgatattcaaagaacttaagtacaaggtataatactcgtgttat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31896681 |
ccactttggcaaccctgaaatacaaaatttggttttaatagtttgcaatttagcagtgatattcaaagaacttaagtacaaggtataatactcgtgttat |
31896780 |
T |
|
| Q |
301 |
agtcgtataattgaagtaaacttctattaaccataccactatgaggtgatcttctttattgcaaagagacgaaacttccttcagaaactctgggttctt |
399 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31896781 |
agtcatataattgaagtaaacttctattaaccataccactatgaggtgatcttctttattgcaaagagacgaaacttccttcagaaactctgggttctt |
31896879 |
T |
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