View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14771_high_11 (Length: 412)
Name: NF14771_high_11
Description: NF14771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14771_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 9 - 397
Target Start/End: Complemental strand, 35436012 - 35435624
Alignment:
| Q |
9 |
ggataacatttcttaccttatcacctttgtagttaatactaaaataagtgtaatgtttcctacactcattaaaataaataattccccactccacatctta |
108 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
35436012 |
ggataacatttcttaccttatcacctttgtagttaatactaaaataagagtcatgttccctacactcattaaaataaataattccccactccacatctta |
35435913 |
T |
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| Q |
109 |
gtgaatattttctcctaaaacaactgtgagaatattttctttatattgactttgtggaagtgggaccaattcaacttagccccacatattgttagttaat |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
35435912 |
gtgaatattttctcctaaaacaactgtgagaatattttctttatattgactttgtggaagtgggaccaattcaacttagctccacatattgttagttaat |
35435813 |
T |
|
| Q |
209 |
ttgtgcatattggtgcccttttcatatgatctggttggcaatttggagtgcaaaattctaatggaagtaataaaatttaataagtttgaacccttcataa |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35435812 |
ttgtgcatattggtgcccttttcatatgatctggttggcaatttggagtgcaaaattctaatggaagtaataaaatttaataagtttgaacccttcataa |
35435713 |
T |
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| Q |
309 |
gcctacaaagtactccaatatttgtgctttcaaatatgggaatcaaaaaagaaaatacgaatcaaagttctcccattaaggttgcaatt |
397 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35435712 |
gcctacaaagtactctaatatttgtgctttcaaatatgggaatcaaaaaagaaaatacgaatcaaagttctcccattaaggttgcaatt |
35435624 |
T |
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