View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14771_high_35 (Length: 211)
Name: NF14771_high_35
Description: NF14771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14771_high_35 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 209
Target Start/End: Complemental strand, 6489832 - 6489629
Alignment:
| Q |
6 |
aaaatgacaaataagctgataccatcaactgttacgtggtaaaacaatggctctccacgtagaaaaatcaatgtcactgattagttactacttgtgattt |
105 |
Q |
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| T |
6489832 |
aaaatgacaaataagctgataccatcaactgttacgtggtaaaacaatggctctccacgtagaaaaatcaatgtcactgattagttactacttctgattt |
6489733 |
T |
|
| Q |
106 |
ctttggtatatcttggactcgcactccatctccaatatggagtattctttatttaaattcaaaaaacgttccacaaagttacacgtccaataagcaatgc |
205 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
6489732 |
ctttggtatatcttggactcacactccatctccaatatggagtattctttatttaaattcaaaaaacgttccacaaagttacacgtccaatatgcaatgc |
6489633 |
T |
|
| Q |
206 |
aatg |
209 |
Q |
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|||| |
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| T |
6489632 |
aatg |
6489629 |
T |
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