View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14771_low_14 (Length: 379)
Name: NF14771_low_14
Description: NF14771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14771_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 295; Significance: 1e-165; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 23 - 364
Target Start/End: Complemental strand, 9700391 - 9700048
Alignment:
| Q |
23 |
aagaatatcctaattaattgatcaacactaggtgaatatccataaaatttagctagcaatctcaatttttcttgttctcatctcctaagctaacttagga |
122 |
Q |
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| T |
9700391 |
aagaatatcctaattaattgatcaacactaggtgaatatccataacatttagctagcaatctcaatttttcttgttctcatctcctaagctaacttagga |
9700292 |
T |
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| Q |
123 |
ctaaacgtcacattgttacattatcaaacacatatcaatgcatagccataataatatatataagagcatacacataaacacctaaaccaaattaactcca |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9700291 |
ctaaacgtcacattgttacattatcaaacacatatcaatgcatagccataataatatatataagagcatacacataaacacctaaaccaaattaactcca |
9700192 |
T |
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| Q |
223 |
aaaaccaacttgagagagtcttc--nnnnnnnnnnaccaaaatgggattagaagtccttgaggctcttgattcagctcgtacacaatggtaccatgtaac |
320 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9700191 |
aaaaccaacttgagagagtcttcctttttttttttaccaaaatgggattagaagtccttgaggctcttgattcagctcgtacacaatggtaccatgtaac |
9700092 |
T |
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| Q |
321 |
agctatagtcattgctggcatgggattcttcactgatgcctatg |
364 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
9700091 |
agctatagtaattgctggcatgggattcttcactgatgcctatg |
9700048 |
T |
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