View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14771_low_34 (Length: 237)
Name: NF14771_low_34
Description: NF14771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14771_low_34 |
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Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 221
Target Start/End: Original strand, 52830449 - 52830657
Alignment:
| Q |
13 |
atgaataaaacttcaatttaaacttcataattttgatgtaacgaccaaatgtaaagtaattttcccaggtgcccttannnnnnncctgcttatcttcagc |
112 |
Q |
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| T |
52830449 |
atgaataaaacttcaatttaaacttcataattttgatgtaacgaccaaatgtaaagtaattttcccaggtgcccttatttttttcctgcttatcttcagc |
52830548 |
T |
|
| Q |
113 |
tcaattaagtcaattgatgaatcgaacaattagaacctaaccaacgatagcaatcatttgagattttccattattagatcataataacaatagaaaggaa |
212 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52830549 |
tcaattaagtcaattgatgaatcgagcaattagaacctaaccaacgatagcaatcatttgagattttccattattagatcataataacaatagaaaggaa |
52830648 |
T |
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| Q |
213 |
tcaaaggat |
221 |
Q |
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| T |
52830649 |
tcaaaggat |
52830657 |
T |
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