View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14772_high_1 (Length: 410)

Name: NF14772_high_1
Description: NF14772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14772_high_1
NF14772_high_1
[»] chr4 (70 HSPs)
chr4 (2-243)||(19273256-19273506)
chr4 (1-243)||(13093649-13093894)
chr4 (114-243)||(35809855-35809984)
chr4 (114-243)||(27864372-27864501)
chr4 (113-324)||(38174002-38174212)
chr4 (113-194)||(48403437-48403518)
chr4 (114-324)||(52018110-52018316)
chr4 (1-175)||(33077414-33077587)
chr4 (1-81)||(27864245-27864326)
chr4 (1-80)||(35809731-35809811)
chr4 (1-165)||(17329466-17329636)
chr4 (1-193)||(56054591-56054787)
chr4 (1-177)||(53347242-53347419)
chr4 (113-175)||(3529803-3529865)
chr4 (113-175)||(8995220-8995282)
chr4 (115-177)||(33609420-33609482)
chr4 (113-175)||(34198801-34198863)
chr4 (113-175)||(40721471-40721533)
chr4 (112-177)||(33523839-33523904)
chr4 (1-175)||(18468908-18469085)
chr4 (113-176)||(48506143-48506206)
chr4 (1-81)||(13113874-13113954)
chr4 (1-80)||(16021182-16021262)
chr4 (1-251)||(55549526-55549782)
chr4 (113-175)||(16171446-16171508)
chr4 (113-175)||(23389515-23389577)
chr4 (1-80)||(23389621-23389702)
chr4 (1-176)||(28901457-28901637)
chr4 (1-78)||(38173882-38173960)
chr4 (113-251)||(52773352-52773490)
chr4 (1-80)||(8995096-8995176)
chr4 (113-181)||(28447682-28447750)
chr4 (1-80)||(34463188-34463268)
chr4 (278-329)||(33077171-33077222)
chr4 (1-80)||(40721353-40721432)
chr4 (1-80)||(3529907-3529988)
chr4 (113-167)||(3614800-3614854)
chr4 (112-174)||(23539222-23539284)
chr4 (113-175)||(34463086-34463148)
chr4 (113-181)||(34434093-34434161)
chr4 (113-176)||(31336085-31336148)
chr4 (1-73)||(52773232-52773306)
chr4 (1-80)||(3614898-3614979)
chr4 (1-72)||(34198915-34198988)
chr4 (1-80)||(48506244-48506325)
chr4 (1-65)||(4982001-4982065)
chr4 (113-175)||(13113988-13114047)
chr4 (1-80)||(45081127-45081209)
chr4 (116-175)||(4982121-4982180)
chr4 (1-81)||(19409822-19409904)
chr4 (1-81)||(28447566-28447648)
chr4 (113-175)||(16021307-16021369)
chr4 (34-80)||(16171541-16171587)
chr4 (34-80)||(21654501-21654547)
chr4 (1-80)||(23539320-23539401)
chr4 (34-80)||(31336181-31336227)
chr4 (4-81)||(33607351-33607429)
chr4 (294-331)||(13114192-13114229)
chr4 (1-80)||(40596413-40596493)
chr4 (1-81)||(48403554-48403633)
chr4 (34-81)||(10090129-10090176)
chr4 (12-80)||(34434195-34434267)
chr4 (286-321)||(52773535-52773570)
chr4 (286-321)||(55549444-55549479)
chr4 (34-80)||(2211995-2212041)
chr4 (42-80)||(31848452-31848490)
chr4 (1-80)||(36658782-36658863)
chr4 (34-80)||(46914189-46914235)
chr4 (34-79)||(53181132-53181177)
chr4 (34-78)||(55408218-55408262)
[»] chr6 (30 HSPs)
chr6 (1-241)||(26653636-26653886)
chr6 (1-241)||(26759604-26759855)
chr6 (1-175)||(10886581-10886758)
chr6 (113-174)||(12513481-12513542)
chr6 (1-194)||(34242748-34242942)
chr6 (115-175)||(24348944-24349004)
chr6 (1-192)||(8222454-8222650)
chr6 (113-176)||(12502371-12502434)
chr6 (113-166)||(8668900-8668953)
chr6 (115-176)||(30446724-30446785)
chr6 (1-80)||(12513368-12513448)
chr6 (331-370)||(32525190-32525229)
chr6 (113-164)||(34841943-34841994)
chr6 (1-80)||(8668776-8668857)
chr6 (1-80)||(12502251-12502332)
chr6 (34-80)||(24348853-24348899)
chr6 (1-80)||(30446605-30446688)
chr6 (1-80)||(34841817-34841898)
chr6 (1-79)||(635022-635102)
chr6 (115-175)||(8675163-8675223)
chr6 (34-79)||(6377131-6377176)
chr6 (34-79)||(17957999-17958044)
chr6 (201-250)||(34243055-34243104)
chr6 (278-333)||(10886968-10887023)
chr6 (34-80)||(198202-198248)
chr6 (34-80)||(2503720-2503766)
chr6 (34-80)||(29951724-29951770)
chr6 (34-80)||(34328775-34328821)
chr6 (1-73)||(32360089-32360162)
chr6 (34-78)||(6725324-6725368)
[»] chr8 (55 HSPs)
chr8 (2-243)||(26244969-26245221)
chr8 (114-243)||(40284069-40284198)
chr8 (116-194)||(23550210-23550288)
chr8 (1-80)||(40283946-40284026)
chr8 (113-177)||(44503729-44503793)
chr8 (113-180)||(13947897-13947964)
chr8 (113-175)||(15057047-15057109)
chr8 (116-175)||(44150349-44150408)
chr8 (113-179)||(31128999-31129065)
chr8 (114-251)||(45100492-45100629)
chr8 (1-80)||(29732022-29732102)
chr8 (116-175)||(29732149-29732208)
chr8 (1-81)||(42860264-42860346)
chr8 (113-175)||(38204819-38204881)
chr8 (1-80)||(45100673-45100754)
chr8 (113-174)||(12272010-12272071)
chr8 (1-81)||(15056924-15057005)
chr8 (113-176)||(13497729-13497792)
chr8 (1-79)||(23550081-23550162)
chr8 (34-175)||(13783738-13783883)
chr8 (196-324)||(15057241-15057367)
chr8 (115-176)||(7511306-7511367)
chr8 (286-331)||(43524599-43524644)
chr8 (116-164)||(1632976-1633024)
chr8 (1-80)||(1633068-1633148)
chr8 (1-80)||(12272110-12272190)
chr8 (116-168)||(43523822-43523874)
chr8 (113-164)||(1954809-1954860)
chr8 (115-174)||(30529203-30529262)
chr8 (1-74)||(13947802-13947876)
chr8 (5-80)||(31129101-31129178)
chr8 (113-175)||(35932321-35932383)
chr8 (113-251)||(42860383-42860523)
chr8 (1-80)||(35932198-35932278)
chr8 (286-326)||(42860561-42860601)
chr8 (34-80)||(13817426-13817472)
chr8 (184-250)||(13948073-13948139)
chr8 (1-80)||(26748610-26748691)
chr8 (196-250)||(43524657-43524710)
chr8 (1-73)||(1954906-1954981)
chr8 (34-79)||(42861072-42861117)
chr8 (1-80)||(26631804-26631884)
chr8 (1-80)||(30470470-30470550)
chr8 (34-73)||(5214172-5214211)
chr8 (124-175)||(5736493-5736544)
chr8 (124-175)||(34954880-34954931)
chr8 (286-321)||(45100410-45100445)
chr8 (34-80)||(5736397-5736443)
chr8 (34-80)||(8449685-8449731)
chr8 (34-80)||(18028995-18029041)
chr8 (34-80)||(34954984-34955030)
chr8 (34-79)||(4625177-4625222)
chr8 (47-80)||(38204919-38204952)
chr8 (12-61)||(43523928-43523979)
chr8 (36-80)||(44503644-44503688)
[»] chr7 (53 HSPs)
chr7 (1-243)||(45548870-45549120)
chr7 (113-215)||(39770184-39770285)
chr7 (116-194)||(38352076-38352154)
chr7 (1-175)||(42881945-42882117)
chr7 (116-194)||(20354719-20354797)
chr7 (113-175)||(28317627-28317689)
chr7 (113-175)||(33508156-33508218)
chr7 (113-181)||(115141-115209)
chr7 (1-80)||(28317732-28317812)
chr7 (113-168)||(22660327-22660382)
chr7 (1-80)||(30720461-30720540)
chr7 (1-80)||(32126902-32126983)
chr7 (199-331)||(40299965-40300095)
chr7 (113-175)||(47158958-47159020)
chr7 (1-81)||(40300583-40300664)
chr7 (1-72)||(22660224-22660296)
chr7 (115-175)||(37952242-37952302)
chr7 (116-175)||(26815590-26815649)
chr7 (116-175)||(32749409-32749468)
chr7 (1-80)||(33508253-33508331)
chr7 (116-175)||(40690795-40690854)
chr7 (1-80)||(26815464-26815545)
chr7 (1-80)||(38351954-38352035)
chr7 (113-175)||(43201484-43201546)
chr7 (1-81)||(115015-115096)
chr7 (280-333)||(33507886-33507939)
chr7 (1-80)||(37952117-37952197)
chr7 (1-80)||(38970389-38970471)
chr7 (1-79)||(20354598-20354677)
chr7 (113-164)||(36521964-36522015)
chr7 (1-80)||(30630286-30630367)
chr7 (1-80)||(32749292-32749373)
chr7 (129-175)||(40300185-40300231)
chr7 (196-331)||(22660520-22660652)
chr7 (113-251)||(30720581-30720721)
chr7 (117-176)||(30567075-30567134)
chr7 (1-73)||(36521837-36521911)
chr7 (1-80)||(33078455-33078536)
chr7 (1-80)||(47159060-47159141)
chr7 (113-176)||(33078351-33078415)
chr7 (1-65)||(30566963-30567029)
chr7 (113-176)||(38970505-38970568)
chr7 (34-81)||(39770104-39770151)
chr7 (34-73)||(40690701-40690740)
chr7 (34-80)||(5813653-5813699)
chr7 (34-80)||(35028471-35028517)
chr7 (34-80)||(37888755-37888801)
chr7 (42-80)||(48985266-48985304)
chr7 (34-78)||(22194607-22194651)
chr7 (1-80)||(33379626-33379706)
chr7 (124-164)||(33379756-33379796)
chr7 (1-80)||(37888178-37888260)
chr7 (34-78)||(43570795-43570839)
[»] chr3 (90 HSPs)
chr3 (113-237)||(36177966-36178090)
chr3 (1-240)||(51304899-51305150)
chr3 (113-342)||(29702121-29702350)
chr3 (1-250)||(41183611-41183863)
chr3 (113-194)||(51999599-51999680)
chr3 (1-174)||(31169823-31169995)
chr3 (1-165)||(49026979-49027148)
chr3 (4-177)||(12975173-12975353)
chr3 (116-194)||(6833081-6833159)
chr3 (1-175)||(35471869-35472046)
chr3 (115-179)||(20140024-20140088)
chr3 (113-175)||(6044875-6044937)
chr3 (1-251)||(51998710-51998969)
chr3 (34-175)||(4873713-4873852)
chr3 (115-175)||(33187655-33187715)
chr3 (113-177)||(48886376-48886440)
chr3 (1-80)||(50734357-50734437)
chr3 (1-80)||(50778418-50778498)
chr3 (1-80)||(36178133-36178211)
chr3 (113-176)||(55027222-55027285)
chr3 (113-175)||(10424205-10424267)
chr3 (113-175)||(32119980-32120042)
chr3 (113-175)||(42564410-42564472)
chr3 (116-173)||(11908499-11908556)
chr3 (1-79)||(11908377-11908458)
chr3 (1-80)||(37182717-37182798)
chr3 (113-175)||(44084773-44084835)
chr3 (115-176)||(43475880-43475941)
chr3 (1-80)||(6044981-6045061)
chr3 (115-175)||(37182620-37182680)
chr3 (1-80)||(42564287-42564367)
chr3 (113-164)||(27848049-27848100)
chr3 (1-80)||(4046461-4046542)
chr3 (113-251)||(4046584-4046722)
chr3 (1-80)||(32120087-32120168)
chr3 (1-80)||(44084649-44084730)
chr3 (114-175)||(7008576-7008637)
chr3 (1-81)||(26162187-26162268)
chr3 (1-81)||(29701996-29702077)
chr3 (4-80)||(48886481-48886558)
chr3 (115-164)||(50415361-50415410)
chr3 (114-175)||(50734483-50734544)
chr3 (114-175)||(50778311-50778372)
chr3 (1-80)||(6832953-6833035)
chr3 (1-80)||(20139898-20139978)
chr3 (113-181)||(35540110-35540178)
chr3 (113-181)||(46136818-46136886)
chr3 (1-80)||(55027104-55027184)
chr3 (113-164)||(30415014-30415065)
chr3 (116-162)||(26162103-26162149)
chr3 (1-80)||(30415110-30415191)
chr3 (116-173)||(38571700-38571757)
chr3 (1-80)||(10424303-10424385)
chr3 (1-80)||(35540216-35540298)
chr3 (1-80)||(46136921-46137001)
chr3 (206-250)||(51999432-51999476)
chr3 (278-333)||(4873439-4873494)
chr3 (1-80)||(7520780-7520859)
chr3 (113-176)||(15007653-15007716)
chr3 (1-81)||(43475756-43475840)
chr3 (113-176)||(49406880-49406943)
chr3 (34-80)||(49822597-49822643)
chr3 (34-79)||(25787409-25787454)
chr3 (34-79)||(25829366-25829411)
chr3 (34-79)||(33934896-33934941)
chr3 (34-79)||(42598064-42598109)
chr3 (198-250)||(6833274-6833326)
chr3 (1-80)||(38571796-38571880)
chr3 (116-160)||(47700499-47700543)
chr3 (1-80)||(49086477-49086557)
chr3 (1-72)||(50415466-50415538)
chr3 (1-73)||(33187767-33187841)
chr3 (124-175)||(49356836-49356887)
chr3 (286-321)||(51998632-51998667)
chr3 (34-80)||(5844671-5844717)
chr3 (34-80)||(17469791-17469837)
chr3 (34-80)||(42602245-42602291)
chr3 (34-80)||(47147648-47147694)
chr3 (34-80)||(50034667-50034713)
chr3 (35-80)||(7008494-7008539)
chr3 (126-175)||(7520700-7520749)
chr3 (34-79)||(25450134-25450179)
chr3 (34-79)||(27847960-27848005)
chr3 (34-79)||(51436002-51436047)
chr3 (1-65)||(51999731-51999798)
chr3 (34-78)||(28410769-28410813)
chr3 (1-80)||(33751652-33751734)
chr3 (34-78)||(35852893-35852937)
chr3 (34-78)||(43022978-43023022)
chr3 (34-78)||(51974620-51974664)
[»] chr5 (65 HSPs)
chr5 (114-243)||(13479069-13479198)
chr5 (114-243)||(39239009-39239138)
chr5 (113-321)||(13592319-13592527)
chr5 (113-194)||(25670342-25670423)
chr5 (116-194)||(3455287-3455365)
chr5 (1-194)||(4218952-4219148)
chr5 (113-324)||(7651440-7651650)
chr5 (113-194)||(9958146-9958227)
chr5 (113-324)||(31007798-31008007)
chr5 (2-76)||(39238886-39238961)
chr5 (113-175)||(19241774-19241836)
chr5 (113-177)||(32363004-32363068)
chr5 (1-79)||(13479243-13479326)
chr5 (113-251)||(23648535-23648673)
chr5 (113-251)||(23809899-23810037)
chr5 (115-175)||(29616031-29616091)
chr5 (1-80)||(19241650-19241729)
chr5 (116-175)||(39008972-39009031)
chr5 (113-175)||(42804340-42804402)
chr5 (116-173)||(23090000-23090057)
chr5 (113-173)||(27405739-27405799)
chr5 (1-80)||(31008052-31008132)
chr5 (1-80)||(42318226-42318306)
chr5 (199-333)||(42804073-42804205)
chr5 (5-77)||(42804440-42804512)
chr5 (1-79)||(23089874-23089953)
chr5 (1-80)||(25670459-25670538)
chr5 (1-80)||(13592564-13592645)
chr5 (113-175)||(42318350-42318412)
chr5 (286-331)||(23648445-23648490)
chr5 (286-331)||(23810082-23810127)
chr5 (4-80)||(32363107-32363186)
chr5 (1-164)||(40892132-40892301)
chr5 (1-73)||(3455170-3455242)
chr5 (1-80)||(4938432-4938512)
chr5 (113-181)||(30644586-30644654)
chr5 (1-79)||(27405837-27405916)
chr5 (1-79)||(27945962-27946041)
chr5 (113-164)||(27946079-27946130)
chr5 (113-164)||(32972941-32972992)
chr5 (117-176)||(36571945-36572004)
chr5 (289-331)||(29615755-29615797)
chr5 (1-80)||(32973037-32973118)
chr5 (1-79)||(9958024-9958104)
chr5 (1-79)||(31011730-31011810)
chr5 (1-80)||(23648712-23648792)
chr5 (1-80)||(23809780-23809860)
chr5 (113-176)||(14279286-14279349)
chr5 (34-80)||(21368629-21368675)
chr5 (34-79)||(4580384-4580429)
chr5 (13-78)||(12913205-12913270)
chr5 (17-80)||(7651330-7651394)
chr5 (1-78)||(14279175-14279254)
chr5 (198-250)||(25670169-25670221)
chr5 (1-80)||(30644687-30644769)
chr5 (1-80)||(41152526-41152606)
chr5 (34-80)||(25033563-25033609)
chr5 (34-80)||(25653199-25653245)
chr5 (196-250)||(29615845-29615899)
chr5 (34-80)||(29616134-29616180)
chr5 (117-175)||(34528960-34529018)
chr5 (1-78)||(34529066-34529144)
chr5 (42-80)||(36572051-36572089)
chr5 (127-176)||(4938558-4938607)
chr5 (116-160)||(12913308-12913352)
[»] chr2 (45 HSPs)
chr2 (1-187)||(7762727-7762912)
chr2 (1-251)||(44280459-44280710)
chr2 (124-194)||(17486269-17486339)
chr2 (113-175)||(22349445-22349507)
chr2 (113-175)||(43022148-43022210)
chr2 (113-176)||(9118285-9118348)
chr2 (116-175)||(17928748-17928807)
chr2 (113-251)||(36527279-36527417)
chr2 (113-186)||(6363840-6363913)
chr2 (1-79)||(14383312-14383391)
chr2 (116-175)||(39490592-39490651)
chr2 (1-80)||(1072711-1072792)
chr2 (1-80)||(4279433-4279514)
chr2 (116-194)||(5144901-5144979)
chr2 (113-174)||(1072612-1072673)
chr2 (113-194)||(13151142-13151223)
chr2 (114-175)||(14383439-14383500)
chr2 (2-80)||(17928854-17928936)
chr2 (1-175)||(36209023-36209192)
chr2 (1-80)||(22349551-22349631)
chr2 (1-80)||(36527161-36527243)
chr2 (116-169)||(1308236-1308289)
chr2 (113-164)||(7585087-7585138)
chr2 (34-80)||(1308330-1308376)
chr2 (1-80)||(7585183-7585264)
chr2 (1-80)||(9118166-9118247)
chr2 (1-80)||(43022032-43022115)
chr2 (1-81)||(926500-926581)
chr2 (1-79)||(12858231-12858311)
chr2 (1-79)||(30819318-30819398)
chr2 (1-80)||(13151231-13151313)
chr2 (14-80)||(39432411-39432477)
chr2 (34-79)||(9072621-9072666)
chr2 (115-168)||(14151816-14151869)
chr2 (286-335)||(36527464-36527513)
chr2 (1-80)||(14151887-14151969)
chr2 (286-321)||(14383622-14383657)
chr2 (1-81)||(31184936-31185018)
chr2 (286-321)||(44280756-44280791)
chr2 (34-80)||(4296302-4296348)
chr2 (34-72)||(5145027-5145065)
chr2 (34-80)||(8855374-8855420)
chr2 (34-80)||(36855055-36855101)
chr2 (1-79)||(1987482-1987564)
chr2 (34-78)||(43494918-43494962)
[»] scaffold0021 (1 HSPs)
scaffold0021 (34-194)||(109754-109913)
[»] chr1 (55 HSPs)
chr1 (1-194)||(45363819-45364019)
chr1 (1-177)||(33167556-33167739)
chr1 (1-80)||(37690945-37691024)
chr1 (1-80)||(37822944-37823023)
chr1 (113-175)||(47297142-47297204)
chr1 (113-175)||(48384721-48384783)
chr1 (1-182)||(51156234-51156414)
chr1 (1-177)||(29524241-29524425)
chr1 (1-80)||(17675994-17676073)
chr1 (1-76)||(30878287-30878362)
chr1 (1-71)||(31159774-31159844)
chr1 (113-175)||(45455453-45455515)
chr1 (113-251)||(45622998-45623136)
chr1 (1-81)||(29919710-29919791)
chr1 (1-176)||(43739372-43739551)
chr1 (114-251)||(51493940-51494077)
chr1 (1-80)||(10265683-10265763)
chr1 (125-181)||(30878174-30878230)
chr1 (1-80)||(45623180-45623260)
chr1 (1-80)||(51494123-51494203)
chr1 (1-81)||(8471553-8471635)
chr1 (113-176)||(10265519-10265582)
chr1 (116-175)||(31159891-31159950)
chr1 (113-251)||(29919827-29919965)
chr1 (113-175)||(37823065-37823127)
chr1 (115-251)||(37690765-37690901)
chr1 (113-176)||(36231381-36231444)
chr1 (113-167)||(2474675-2474729)
chr1 (114-175)||(14097155-14097216)
chr1 (1-78)||(20584473-20584550)
chr1 (278-331)||(47296897-47296950)
chr1 (127-175)||(17675865-17675913)
chr1 (1-80)||(19578561-19578643)
chr1 (1-80)||(48384828-48384908)
chr1 (1-181)||(51523607-51523786)
chr1 (1-80)||(2474773-2474854)
chr1 (113-162)||(19578477-19578526)
chr1 (1-79)||(45242392-45242472)
chr1 (1-80)||(14097028-14097110)
chr1 (1-78)||(47297242-47297321)
chr1 (1-80)||(48407711-48407793)
chr1 (113-176)||(8471673-8471736)
chr1 (279-321)||(29920005-29920047)
chr1 (1-78)||(3754708-3754785)
chr1 (278-331)||(17675596-17675649)
chr1 (113-154)||(17675913-17675954)
chr1 (1-80)||(8464906-8464988)
chr1 (34-73)||(36231299-36231338)
chr1 (286-321)||(37690683-37690718)
chr1 (286-321)||(51493858-51493893)
chr1 (42-80)||(643501-643539)
chr1 (34-80)||(27629991-27630037)
chr1 (34-80)||(31471563-31471609)
chr1 (34-80)||(37419875-37419921)
chr1 (1-80)||(17786585-17786667)
[»] scaffold1905 (3 HSPs)
scaffold1905 (1-194)||(963-1164)
scaffold1905 (196-334)||(578-713)
scaffold1905 (1-175)||(270-446)
[»] scaffold1183 (2 HSPs)
scaffold1183 (113-179)||(110-176)
scaffold1183 (34-78)||(20-64)
[»] scaffold0015 (1 HSPs)
scaffold0015 (116-175)||(83463-83522)
[»] scaffold0004 (2 HSPs)
scaffold0004 (116-175)||(106298-106357)
scaffold0004 (1-81)||(106175-106256)
[»] scaffold0758 (1 HSPs)
scaffold0758 (1-80)||(6369-6451)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-78)||(124380-124458)


Alignment Details
Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 19273256 - 19273506
Alignment:
Q  2 aataataaggttaagagagtgaaaaatttgaatttt-ttcggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaatttt 100  Q
    ||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||         |||||||||||    
T  19273256 aataataagattaagagagtgaaaaatttgatttttattctgtgtccaaatcaaatgatccaagtttctatttgtagaga-aaaaaaaatcacgaatttt 19273354  T
Q  101 ggtnnnnnnnn---------tattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgt 191  Q
    |||                 | ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  19273355 ggtaaaaaaaaataatttttttttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaaaccacgtgt 19273454  T
Q  192 caccgtgggccagactttcaacatgttgaacctcttcaacacctctctcctc 243  Q
    ||| | ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  19273455 cactgcgggccaggctttcaacatgttgaaccttttcaacacctctctcctc 19273506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 13093894 - 13093649
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaatttt 100  Q
    |||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||         |||||||||||    
T  13093894 taataataagattaagagagtgaaaaatttgatttttttctgtgtccaaatcaaatgatccaaatttctatttgtagaga---aaaaaatcacgaatttt 13093798  T
Q  101 ggtnnnnnnnntatt------atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||        | ||      |||||||||||||||||||| || ||||||||||||| |||||||||||| |||||||||||||||| |||| ||||||    
T  13093797 ggtaaatttttttttttttttatttgctatgaaataattgaatccaaattattaagaaaataaaaatccaaacagccaatcgtaacaagccacgtgtcac 13093698  T
Q  195 cgtgggccagactttcaacatgttgaacctcttcaacacctctctcctc 243  Q
     | |||||| |||||||||||||||||||| ||||||||||||||||||    
T  13093697 tgcgggccatactttcaacatgttgaaccttttcaacacctctctcctc 13093649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 35809855 - 35809984
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaac 213  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| |  |||||| ||||||||    
T  35809855 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcactgcaggccaggctttcaac 35809954  T
Q  214 atgttgaacctcttcaacacctctctcctc 243  Q
    ||||||||||| ||||||||||||||||||    
T  35809955 atgttgaaccttttcaacacctctctcctc 35809984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 27864372 - 27864501
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaac 213  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||  ||  |||||| | ||||||| ||||||||    
T  27864372 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagtcatgtgtcactgcgggccaggctttcaac 27864471  T
Q  214 atgttgaacctcttcaacacctctctcctc 243  Q
    ||||||||||| ||||||||||||||||||    
T  27864472 atgttgaaccttttcaacacctctctcctc 27864501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 113 - 324
Target Start/End: Original strand, 38174002 - 38174212
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||  ||||   ||  |||| | ||||||||  |||||||    
T  38174002 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagtcaatcaaaacatgtcaggtgtctctgtgggccaagctttcaa 38174101  T
Q  213 catgttgaacctcttcaacacctctctcctccaactcacnnnnnnnccaattcaacannnnnnnttacaatgattcaacatgttgaatgacaaattcaac 312  Q
    |||||||||  | |||||||||||||||||||||||||        |||||||||||        ||||||| |||||||||||||||  ||||||||||    
T  38174102 catgttgaatttgttcaacacctctctcctccaactcatatttttcccaattcaacaaccaccc-tacaatggttcaacatgttgaattgcaaattcaac 38174200  T
Q  313 atgccattgcac 324  Q
    || |||||||||    
T  38174201 attccattgcac 38174212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 48403518 - 48403437
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  48403518 attatttgctatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 48403437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 114 - 324
Target Start/End: Original strand, 52018110 - 52018316
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaac 213  Q
    |||||||| |||||||||||||||| |||||||| ||||||||||||| |||||||||||||  ||||  |||  |||  | ||||||||| ||||||||    
T  52018110 ttatttgcaatgaaataattgagtccaaattattgagaagataaaaattcaagcagccaatcaaaacatgccaagtgt--ctgtgggccaggctttcaac 52018207  T
Q  214 atgttgaacctcttcaacacctctctcctccaactcacnnnnnnnccaattcaacannnnnnnttacaatgattcaacatgttgaatgacaaattcaaca 313  Q
    ||||||||  | |||||||||||||||||||||||||        |||||||||||        ||||||| |||||||||||||||  |||||||||||    
T  52018208 atgttgaatttgttcaacacctctctcctccaactcatatttttcccaattcaacaaccccc--tacaatggttcaacatgttgaattgcaaattcaaca 52018305  T
Q  314 tgccattgcac 324  Q
    | |||||||||    
T  52018306 tcccattgcac 52018316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 33077587 - 33077414
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||| | ||||| ||||||         | ||||||||    
T  33077587 taataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtctttatttatagagaaaaagaaatt-acgaattt 33077489  T
Q  100 tggtnnnnnnnntattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||         ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33077488 tggtaaaaaaaa-attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 33077414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27864245 - 27864326
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcg-gtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||| ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  27864245 taataataagattaagagagtgaaaaatttgattttttttgtgtgtccaaatcaaatgatccaagtttctatttgtagagag 27864326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35809731 - 35809811
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||    
T  35809731 taataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtttctatttgtagaga 35809811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 17329636 - 17329466
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg----aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaa 96  Q
    |||||||||| ||||||||||||||||||||      ||||||| |||||||||||||||||||||||| |||||||||||||||        |||||||    
T  17329636 taataataagattaagagagtgaaaaatttggtttttttttttccgtgtccaaatcaaatgatccaagtctctatttgtagagagaaaaaaaatcacgaa 17329537  T
Q  97 ttttggtnnnnnnnnt--attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaa 165  Q
    |||||||        |  ||||| ||  |||||||||||||||| ||||||||||||||||||||||||||    
T  17329536 ttttggtaaaaaaaataaattatatgtaatgaaataattgagtccaaattattaagaagataaaaatccaa 17329466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 56054591 - 56054787
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaatttt 100  Q
    |||||||||| |||||||||||||||| |||  ||||||| |||||||||||||||||||||||| ||||||| ||||||         |||||||||||    
T  56054591 taataataagattaagagagtgaaaaacttggtttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga-aaaaaaaatcacgaatttt 56054689  T
Q  101 ggt-----nnnnnnnntattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtca 193  Q
    |||              ||||||||| |||||||||||||||| ||| |||||||| |||||||||||||||||||||||| ||  | ||||||||||    
T  56054690 ggtaaaaataaaataaaattatttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcgaaatcagccacatgtca 56054787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 53347419 - 53347242
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaat 97  Q
    |||||||||| |||||||||||||||| |||  ||||||   | |||||||||||||||||||||||| |||||||||| | |         ||||||||    
T  53347419 taataataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaagtctctatttgtacaaa----aaaattcacgaat 53347324  T
Q  98 tttggtnnnnnnnnta--ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgt 177  Q
    ||||||        ||  |||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  53347323 tttggtaaaaaaaataaattatttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcagccaatcgt 53347242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 3529865 - 3529803
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3529865 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 3529803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 8995220 - 8995282
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8995220 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 8995282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 33609420 - 33609482
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgt 177  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33609420 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgt 33609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 34198863 - 34198801
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34198863 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 34198801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 40721471 - 40721533
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40721471 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 40721533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 33523839 - 33523904
Alignment:
Q  112 tattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgt 177  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  33523839 tattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaacagccaatcgt 33523904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 18469085 - 18468908
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaat 97  Q
    |||||||||| ||||||||||||||||| ||| ||||||   | |||||||||||||||||||||||| |||||| |||||||         |||| |||    
T  18469085 taataataagattaagagagtgaaaaatatgattttttttttctgtgtccaaatcaaatgatccaagtctctattagtagaga-aaaaaaaatcacaaat 18468987  T
Q  98 tttggtnnnnnnnntatt-atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||         | | |||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18468986 tttggtaaaataaaaaatcattttcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 18468908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 48506206 - 48506143
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  48506206 attatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcg 48506143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13113874 - 13113954
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||  |||||||||||||| | |||| ||||||| |||||||||||||||||||||||| ||||||| |||||||    
T  13113874 taataataatattaagagagtgaaatacttgatttttttctgtgtccaaatcaaatgatccaagtctctatttatagagag 13113954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16021182 - 16021262
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  16021182 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 16021262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 55549782 - 55549526
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||| |||||||||||||||| |||| |||||| | ||||||||||||||| |||||||| ||||||| ||||||         | ||||||||    
T  55549782 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaattatccaagtctctatttatagagaaaaaaaaaattacgaattt 55549683  T
Q  100 tggt-----nnnnnnnntattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    ||||              ||||||||| |||||||||||| ||| |||||||||||||||||||||| | ||||| |||||    ||  |||  |||| |    
T  55549682 tggtaaaaaaaaataaaaattatttgcaatgaaataattgggtccaaattattaagaagataaaaattcgagcagtcaatcaacgcacgccaagtgtctc 55549583  T
Q  195 cgtgggccagactttcaacatgttgaacctcttcaacacctctctcctccaactcac 251  Q
    |||||||||||| ||||||||||||||    |||||||  || ||||||||||||||    
T  55549582 cgtgggccagacattcaacatgttgaattgtttcaacaattccctcctccaactcac 55549526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 16171508 - 16171446
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  16171508 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 16171446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 23389577 - 23389515
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  23389577 attatttgcaatgaaataattgagtccaaataattaagaagataaaaatccaagcagtcaatc 23389515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23389702 - 23389621
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||| ||||  ||||||  | |||||||||||||||||||||||| ||||||||||||||    
T  23389702 taataataagattaagagagtgaaaattttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttgtagaga 23389621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 28901457 - 28901637
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaat 97  Q
    |||||||||| |||||||||||||||| |||  ||||||   | |||||||||||||||||||||||| ||||||| |||||||        ||||||||    
T  28901457 taataataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaagtctctatttatagagagaaaaaa--tcacgaat 28901554  T
Q  98 tttggtnnnnnnnnta----ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||         |    |||||||| |||||||||||||||  ||| |||||||| ||||||||||||||||||||||||    
T  28901555 tttggtaaaaaaataaaaaattatttgcaatgaaataattgagtgcaaaatattaagatgataaaaatccaagcagccaatcg 28901637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38173882 - 38173960
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    |||||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| ||||    
T  38173882 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttataga 38173960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 52773352 - 52773490
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    ||||||||| |||||||||||  ||| |||||||||||||||||||||| | |||||||||||  ||||  |||  ||||   ||||||||| | |||||    
T  52773352 attatttgcaatgaaataattaggtccaaattattaagaagataaaaattcgagcagccaatcaaaacatgccaagtgtctatgtgggccaggcattcaa 52773451  T
Q  213 catgttgaacctcttcaacacctctctcctccaactcac 251  Q
    |||||||||    |||||||| || ||||||||||||||    
T  52773452 catgttgaattgtttcaacacttccctcctccaactcac 52773490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8995096 - 8995176
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  8995096 taatgataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 8995176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 28447682 - 28447750
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaaca 181  Q
    ||||||||| |||||||||||||||| ||| ||||||||  ||||||||| ||||||||||||||||||    
T  28447682 attatttgcaatgaaataattgagtccaaagtattaagataataaaaatcgaagcagccaatcgtaaca 28447750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 34463268 - 34463188
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| |||||| | ||||||||||||||| |||||||| ||||||| ||||||    
T  34463268 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaataatccaagtctctatttatagaga 34463188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 278 - 329
Target Start/End: Complemental strand, 33077222 - 33077171
Alignment:
Q  278 tacaatgattcaacatgttgaatgacaaattcaacatgccattgcacttggt 329  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  33077222 tacaatgattcaacatgttgaatggcaaattcaacatgtcattgcacttggt 33077171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40721353 - 40721432
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| |||||||||||||||| |||| ||||||  ||||||||||||||||||| |||| ||||||| ||||||    
T  40721353 taatgataagattaagagagtgaaaaacttgatttttttttgtgtccaaatcaaatgatcaaagtatctatttatagaga 40721432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3529988 - 3529907
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| |||||||||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||| ||||||    
T  3529988 taatgataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 3529907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 3614854 - 3614800
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagc 167  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||    
T  3614854 attatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaagc 3614800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 23539284 - 23539222
Alignment:
Q  112 tattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaat 174  Q
    |||||||||| |||||||||||||||| ||| |||||||| |||||||||| |||||||||||    
T  23539284 tattatttgcaatgaaataattgagtccaaaatattaagatgataaaaatctaagcagccaat 23539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 34463148 - 34463086
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||||||| || |||||||||    
T  34463148 attatttgcaatgaaataattgggtccaaattattaagaagataaaaatcgaaacagccaatc 34463086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 34434161 - 34434093
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaaca 181  Q
    ||||||| | |||||||||||||||| ||| ||||||||  ||||||||| ||||||||||||||||||    
T  34434161 attattttcaatgaaataattgagtccaaaatattaagataataaaaatctaagcagccaatcgtaaca 34434093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 31336148 - 31336085
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||||||||||||| ||| |||||| | ||||||||| ||||||||||||||    
T  31336148 attatttgcaatgaaataattgagtccaaaatattaaaatgataaaaattcaagcagccaatcg 31336085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 52773232 - 52773306
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctattt 73  Q
    |||||||||| |||||||||||||||| |||| ||||||  | |||||||||||||||||| ||||| |||||||    
T  52773232 taataataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgattcaagtctctattt 52773306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3614979 - 3614898
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg--aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||| | ||    ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  3614979 taataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 3614898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 34198988 - 34198915
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatt 72  Q
    |||| ||||| |||||||||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||    
T  34198988 taatgataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatt 34198915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 48506325 - 48506244
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||  |||||||||||||||| |||  ||||||  | |||||||||||||||||||||||| ||||||| ||||||    
T  48506325 taataataatattaagagagtgaaaaacttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 48506244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4982001 - 4982065
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagt 65  Q
    |||| ||||| ||||||||||||||||| ||| ||||||  ||||||||||||||||||| ||||    
T  4982001 taattataagattaagagagtgaaaaatatgatttttttttgtgtccaaatcaaatgatctaagt 4982065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 13113988 - 13114047
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||| ||| ||||||||   |||||||||||||||||||||||||    
T  13113988 attatttgcaatgaaataattgggtccaaattatt---aagataaaaatccaagcagccaatc 13114047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 45081209 - 45081127
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| ||||||||||||||||| ||| ||||||   | ||||||||||||||||||| |||| ||||||| ||||||    
T  45081209 taattataagattaagagagtgaaaaatatgattttttttttctgtgtccaaatcaaatgatcaaagtctctatttatagaga 45081127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 4982121 - 4982180
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||| |  |||||||||    
T  4982121 atttgcaatgaaataattgaatccaaattattaagaagataaaaatcgagccagccaatc 4982180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19409822 - 19409904
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcg--gtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||| |||||| ||||||||| |||| ||||||    ||||||||||||||||| |||||| ||||||| |||||||    
T  19409822 taataataagattaagatagtgaaaaacttgatttttttttttgtgtccaaatcaaatgaaccaagtctctatttctagagag 19409904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28447566 - 28447648
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaa--ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||| ||| |||||||||||||||| |||    ||||||| |||||||||||||||||| ||||| ||||||| |||||||    
T  28447566 taataaaaagattaagagagtgaaaaacttggtgtttttttctgtgtccaaatcaaatgattcaagtctctatttatagagag 28447648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 16021307 - 16021369
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| || ||||||||| ||  |||||||||| ||||||||||||||||||| |||||    
T  16021307 attatttgcaataaaataattgggttcaaattattaaaaagataaaaatccaagcagtcaatc 16021369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 16171587 - 16171541
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  16171587 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 16171541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 21654547 - 21654501
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  21654547 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 21654501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23539401 - 23539320
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg--aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||    ||||||| |||| |||||||||| |||||||| ||||||| ||||||    
T  23539401 taataataagattaagagagtgaaaaacttggtttttttttctgtgttcaaatcaaataatccaagtctctatttatagaga 23539320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 31336227 - 31336181
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  31336227 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 31336181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 33607351 - 33607429
Alignment:
Q  4 taataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    ||||||| |||||| ||||||||| |||  |||||| | ||||||||||||||||||| |||| ||||||| |||||||    
T  33607351 taataagattaagatagtgaaaaacttgtttttttttctgtgtccaaatcaaatgatcaaagtctctatttatagagag 33607429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 13114192 - 13114229
Alignment:
Q  294 gttgaatgacaaattcaacatgccattgcacttggtct 331  Q
    |||||||| |||||||||||||||||||||||||||||    
T  13114192 gttgaatggcaaattcaacatgccattgcacttggtct 13114229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 40596493 - 40596413
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcg-gtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| | |||| ||||||||| |||  |||||||  ||||||||||||||||| |||||| ||||||| ||||||    
T  40596493 taataataagatgaagatagtgaaaaacttggtttttttcctgtgtccaaatcaaatgaaccaagtctctatttatagaga 40596413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 48403633 - 48403554
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||  ||||||||||| ||||||||  |||||| | ||||||||||||||||| ||||| ||||||| || ||||    
T  48403633 taataataaaattaagagagtgtaaaatttgtttttttttg-tgtccaaatcaaatgattcaagtctctatttataaagag 48403554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 10090129 - 10090176
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||  |||||||||||||||| |||||| |||||||||||||||    
T  10090129 ttttttctatgtccaaatcaaatgaaccaagtctctatttgtagagag 10090176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 34434267 - 34434195
Alignment:
Q  12 ttaagagagtgaaaaatttgaattttttcg----gtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||||||||| |||| ||||||      ||||||||||||||||||| |||| ||||||||||||||    
T  34434267 ttaagagagtgaaaaacttgatttttttttttttgtgtccaaatcaaatgatcaaagtctctatttgtagaga 34434195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 321
Target Start/End: Original strand, 52773535 - 52773570
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattg 321  Q
    |||||||||||||||| |||||||||||||||||||    
T  52773535 ttcaacatgttgaatggcaaattcaacatgccattg 52773570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 321
Target Start/End: Complemental strand, 55549479 - 55549444
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattg 321  Q
    |||||||||||||||| |||||||||||||||||||    
T  55549479 ttcaacatgttgaatggcaaattcaacatgccattg 55549444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 2212041 - 2211995
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  2212041 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 2211995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 31848490 - 31848452
Alignment:
Q  42 gtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  31848490 gtgtccaaatcaaatgatccaagtctctatttatagaga 31848452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 36658782 - 36658863
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| | |||| ||||||||| |||| ||||||  | ||||||||||||||||| |||| | ||||||| ||||||    
T  36658782 taataataagatgaagatagtgaaaaacttgatttttttttctgtgtccaaatcaaatgaaccaaatctctatttatagaga 36658863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 46914235 - 46914189
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  46914235 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 46914189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 53181177 - 53181132
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| ||||||||||||||||||| |||| ||||||| |||||    
T  53181177 ttttttctgtgtccaaatcaaatgatcaaagtctctatttatagag 53181132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 55408262 - 55408218
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||    
T  55408262 ttttttctgtgtccaaatcaaatgaaccaagtctctatttataga 55408218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 7e-56; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 26653886 - 26653636
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||         ||||||||||    
T  26653886 taataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtttctatttgtagagaaaaaaaaaatcacgaattt 26653787  T
Q  100 tggtnnnnnnnnta---------ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatg 190  Q
    ||||        |          ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| ||    
T  26653786 tggtaaaaaaaattaatttttttttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtg 26653687  T
Q  191 tcaccgtgggccagactttcaacatgttgaacctcttcaacacctctctcc 241  Q
    |||| | ||||||| ||||||||||||||||||| ||||||||||||||||    
T  26653686 tcactgcgggccaggctttcaacatgttgaaccttttcaacacctctctcc 26653636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 26759855 - 26759604
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||         ||||||||||    
T  26759855 taataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtttctatttgtagagaaaaaaaaaatcacgaattt 26759756  T
Q  100 tggtnnnnnnnn----------tattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacat 189  Q
    ||||                  | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| |    
T  26759755 tggtaaaaaaaaattaatttttttttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgt 26759656  T
Q  190 gtcaccgtgggccagactttcaacatgttgaacctcttcaacacctctctcc 241  Q
    ||||| | ||||||| ||||||||||||||||||| ||||||||||||||||    
T  26759655 gtcactgcgggccaggctttcaacatgttgaaccttttcaacacctctctcc 26759604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 10886581 - 10886758
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||| |||||||||||||||| || | |||||| | |||||||||||||||||||||||| ||||||| ||||||         | ||||||||    
T  10886581 taataataagattaagagagtgaaaaacttaattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatt-acgaattt 10886679  T
Q  100 tggtnnnnnnnnta---ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||        ||   |||||||| |||||||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  10886680 tggtaaaaaaaataaaattatttgcaatgaaataattgggtccaaattattaagaagataacaatccaagcagccaatc 10886758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 12513481 - 12513542
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaat 174  Q
    ||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  12513481 attatttgcaatgaaataattgagtctaaaatattaagaagaaaaaaatccaagcagccaat 12513542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 34242748 - 34242942
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaatt 98  Q
    |||||||||| ||||||||||||||||||||  ||||||  | |||||||||||||||||||||| | |||||||||||| |         |||||||||    
T  34242748 taataataagattaagagagtgaaaaatttggtttttttttctgtgtccaaatcaaatgatccaaatctctatttgtagata---aaaaaatcacgaatt 34242844  T
Q  99 ttggtnnnnnnnntat---tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||||         |    ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||  |||| ||||||    
T  34242845 ttggtaaaaaaaaaaaaaatatttgcaatgaaataatt-agtccaaattattaagaagataaaaatccaagcagtcaatcgtaacatgccacgtgtcac 34242942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 24348944 - 24349004
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  24348944 tatttgcaatgaaataattgaatccaaattattaagaagataaaaatccaagcagccaatc 24349004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 8222454 - 8222650
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaat 97  Q
    |||||||||| |||||||||||||||| |||  ||||||   | |||||||||||||||||||||||| ||||||| ||||||         ||||||||    
T  8222454 taataataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaagtatctatttatagaga-aaaaaaaatcacgaat 8222552  T
Q  98 tttggtnnnnnnnntat---tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtc 192  Q
    ||||||        ||    ||||| | |||||||||||||||| ||| |||||||| ||||||||| |||||||||||||| ||||  |||||||||    
T  8222553 tttggtaaaaaaaataacaatattttcaatgaaataattgagtccaaaatattaagatgataaaaattcaagcagccaatcgaaacacgccacatgtc 8222650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 12502371 - 12502434
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||||||||||||| ||||||||||||| | ||||||||||||| |||||||    
T  12502371 attatttgcaatgaaataattgagtccaaattattaagaataaaaaaatccaagcaaccaatcg 12502434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 8668900 - 8668953
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaag 166  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  8668900 attatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaag 8668953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 30446724 - 30446785
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||| |||||||||||||||| ||| |||||||| ||||||||| ||||||||||||||    
T  30446724 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaagcagccaatcg 30446785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 12513368 - 12513448
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||  |||||| | ||||||||||||||||||| |||| ||||||| ||||||    
T  12513368 taataataagattaagagagtgaaaaacttggttttttttctgtgtccaaatcaaatgatcaaagtctctatttatagaga 12513448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 32525190 - 32525229
Alignment:
Q  331 taagagagaaacatgggatcaattgatgatatagaaagat 370  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32525190 taagagagaaacatgggatcaattgatgatatagaaagat 32525229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 34841943 - 34841994
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatcca 164  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  34841943 attatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 34841994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8668776 - 8668857
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg--aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||| | ||    ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  8668776 taataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 8668857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 12502251 - 12502332
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||  ||||||  | |||||||||||||||||| ||||| ||||||| ||||||    
T  12502251 taataataagattaagagagtgaaaaacttggtttttttttctgtgtccaaatcaaatgattcaagtctctatttatagaga 12502332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 24348853 - 24348899
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  24348853 ttttttctgtgtccaaatcaaatgatccaagtctctatttgtagaga 24348899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 30446605 - 30446688
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttga----attttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| ||||     ||||||| ||||| |||||||||||||||||| ||||||| ||||||    
T  30446605 taataataagattaagagagtgaaaaacttgatttttttttttctgtgtcaaaatcaaatgatccaagtctctatttatagaga 30446688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 34841817 - 34841898
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg--aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||| | ||    ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  34841817 taataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 34841898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 635022 - 635102
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| | |||| ||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||| |||||    
T  635022 taataataagatgaagatagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 635102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 8675163 - 8675223
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||||| |  |||||||||    
T  8675163 tatttgcaatgaaataattgagtccaaattattaaaaagataaaaatctagccagccaatc 8675223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 6377176 - 6377131
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||    
T  6377176 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 6377131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 17958044 - 17957999
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||    
T  17958044 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 17957999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 34243055 - 34243104
Alignment:
Q  201 ccagactttcaacatgttgaacctcttcaacacctctctcctccaactca 250  Q
    |||| |||||||||||||||||||||||| || |||| ||||||||||||    
T  34243055 ccaggctttcaacatgttgaacctcttcatcatctctttcctccaactca 34243104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 10886968 - 10887023
Alignment:
Q  278 tacaatgattcaacatgttgaatgacaaattcaacatgccattgcacttggtctaa 333  Q
    ||||||| |||||||||||||||  |||||||||||| ||||||||| | ||||||    
T  10886968 tacaatggttcaacatgttgaattgcaaattcaacatcccattgcacatagtctaa 10887023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 198202 - 198248
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  198202 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 198248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 2503720 - 2503766
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  2503720 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 2503766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 29951770 - 29951724
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||||| |||| ||||||| ||||||    
T  29951770 ttttttctgtgtccaaatcaaatgatctaagtctctatttatagaga 29951724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 34328775 - 34328821
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  34328775 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 34328821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32360089 - 32360162
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctattt 73  Q
    |||||||||| |||||| ||||||||| |||  |||||| | |||||||||||||||||  ||||| |||||||    
T  32360089 taataataagattaagatagtgaaaaacttggttttttttctgtgtccaaatcaaatgaatcaagtctctattt 32360162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 6725368 - 6725324
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||    
T  6725368 ttttttctgtgtccaaatcaaatgaaccaagtctctatttataga 6725324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 4e-54; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 26244969 - 26245221
Alignment:
Q  2 aataataaggttaagagagtgaaaaatttgaatttt-ttcggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaatttt 100  Q
    ||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||         |||||||||||    
T  26244969 aataataagattaagagagtgaaaaatttgatttttattctgtgtccaaatcaaatgatccaagtttctatttgtagaga-aaaaaaaatcacgaatttt 26245067  T
Q  101 ggtnnnnnnnnta-----------ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacat 189  Q
    |||        ||           ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| |    
T  26245068 ggtaaaaaaaataataatttttttttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgt 26245167  T
Q  190 gtcaccgtgggccagactttcaacatgttgaacctcttcaacacctctctcctc 243  Q
    ||||| | ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  26245168 gtcactgcgggccaggctttcaacatgttgaaccttttcaacacctctctcctc 26245221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 40284069 - 40284198
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaac 213  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| | ||||||||||||||||    
T  40284069 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcactgcgggccagactttcaac 40284168  T
Q  214 atgttgaacctcttcaacacctctctcctc 243  Q
    ||||||||||| ||||||||||||||||||    
T  40284169 atgttgaaccttttcaacacctctctcctc 40284198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 23550210 - 23550288
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||    
T  23550210 atttgcaatgaaataattgagtctaaattattaagaagataaaaattcaagcagccaatcgtaacaagccacgtgtcac 23550288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40283946 - 40284026
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttt-ttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  40283946 taataataagattaagagagtgaaaaatttgatttttattctgtgtccaaatcaaatgatccaagtttctatttgtagaga 40284026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 44503729 - 44503793
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgt 177  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44503729 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgt 44503793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 13947897 - 13947964
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaac 180  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  13947897 attatttgttatgaaataattgagtccaaattattaagaagataaaaatccaagtagccaatcgtaac 13947964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 15057047 - 15057109
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15057047 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 15057109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 44150349 - 44150408
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44150349 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 44150408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 31129065 - 31128999
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaa 179  Q
    |||| |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  31129065 attagttgcaatgaaataattgagtccaaattattaagatgataaaaatccaagcagccaatcgtaa 31128999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 45100629 - 45100492
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaac 213  Q
    |||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||||    |   |||  |||| ||||||||||| | ||||||    
T  45100629 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcagcgcgcgccaagtgtctccgtgggccaggcattcaac 45100530  T
Q  214 atgttgaacctcttcaacacctctctcctccaactcac 251  Q
    ||||||||    |||||||| || ||||||||||||||    
T  45100529 atgttgaattgtttcaacacttccctcctccaactcac 45100492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29732022 - 29732102
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||||| ||| |||||| | ||||||||||||||||||| |||| ||||||||||||||    
T  29732022 taataataagattaagagagtgaaaaatatgattttttttctgtgtccaaatcaaatgatcaaagtctctatttgtagaga 29732102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 29732149 - 29732208
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  29732149 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaacagccaatc 29732208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42860264 - 42860346
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||| |||||||||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||| |||||||    
T  42860264 taataataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagagag 42860346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 38204881 - 38204819
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||  ||||||||    
T  38204881 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaacgagccaatc 38204819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 45100754 - 45100673
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||| ||||||    
T  45100754 taataataagattaagagagtgaaaaacttgattttttttcctgtgtccaaatcaaatgatccaagtctctatttatagaga 45100673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 12272071 - 12272010
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaat 174  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  12272071 attatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagtcaat 12272010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15056924 - 15057005
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||| ||||| ||||||| |||||||    
T  15056924 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgattcaagtctctatttatagagag 15057005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 13497729 - 13497792
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||||||||||||| | | |||||||| ||||||||||||||||||||||||    
T  13497729 attatttgcaatgaaataattgagtccagaatattaagatgataaaaatccaagcagccaatcg 13497792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23550081 - 23550162
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttt---tcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| ||||||||||||||||||||  |||||   || |||||||||||||||||| ||||| |||||||||||||    
T  23550081 taataataagattaagagagtgaaaaatttggttttttatttctgtgtccaaatcaaatgattcaagtctctatttgtagag 23550162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 13783883 - 13783738
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattttggtnnnnnnnnt-----attatttgctatgaaa 128  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||         ||||||||||||||        |     ||||||||| ||||||    
T  13783883 ttttttctgtgtccaaatcaaatgatccaagtctctatttgtagaga-aaaaaatatcacgaattttggtaaaaaaaataaaaaattatttgcaatgaaa 13783785  T
Q  129 taattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||| | || |||||||||||||||||||||||||| |||||||||    
T  13783784 taatttaatccaaattattaagaagataaaaatccaaccagccaatc 13783738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 324
Target Start/End: Original strand, 15057241 - 15057367
Alignment:
Q  196 gtgggccagactttcaacatgttgaacctcttcaacacctctctcctccaactcacnnnnnnnccaattcaacannnnnnnttacaatgattcaacatgt 295  Q
    ||||||||||||||||||||||||||  | |||||||| ||||||||||||||||        |||||||||||        ||||||| ||||||||||    
T  15057241 gtgggccagactttcaacatgttgaatttgttcaacacatctctcctccaactcagatttttcccaattcaacaaccccc--tacaatggttcaacatgt 15057338  T
Q  296 tgaatgacaaattcaacatgccattgcac 324  Q
    |||||  |||||||||||| |||||||||    
T  15057339 tgaattgcaaattcaacattccattgcac 15057367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 7511367 - 7511306
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||| |||||||||||||||| ||| |||||||| |||||||||||||| |||||||||    
T  7511367 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagtagccaatcg 7511306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 43524644 - 43524599
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattgcacttggtct 331  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  43524644 ttcaacatgttgaatggcaaattcaacatgccattgcacttggtct 43524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 1633024 - 1632976
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatcca 164  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  1633024 atttgcaatgaaataattgagtccaaattattaagaagataaaaatcca 1632976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1633148 - 1633068
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| ||||||||||||||||| ||| |||||| | ||||||||||||||||||| |||| ||||||| ||||||    
T  1633148 taattataagattaagagagtgaaaaatatgattttttttctgtgtccaaatcaaatgatcaaagtctctatttatagaga 1633068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 12272190 - 12272110
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||  |||||||||||||||| |||  |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  12272190 taataataatattaagagagtgaaaaacttggttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 12272110  T

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Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 43523874 - 43523822
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagca 168  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||||    
T  43523874 atttgcaatgaaataattgagtccaaattattaagaaaataaaaatccaagca 43523822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 1954860 - 1954809
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatcca 164  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  1954860 attatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 1954809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 30529262 - 30529203
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaat 174  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||| ||||||| ||||    
T  30529262 tatttgcaatgaaataattgagtccaaattatttagaagataaaaattcaagcagtcaat 30529203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13947802 - 13947876
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttg 74  Q
    |||||||||| ||||||||||||||| ||||  |||||| | |||||||||| ||||||||||||| ||||||||    
T  13947802 taataataagattaagagagtgaaaattttggttttttttctgtgtccaaatgaaatgatccaagtctctatttg 13947876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 31129178 - 31129101
Alignment:
Q  5 aataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||| |||||||||||||||| |||  ||||||  | |||||||||||||||||||||||| ||||||| ||||||    
T  31129178 aataagattaagagagtgaaaaacttgggttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 31129101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 35932321 - 35932383
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||| ||  |||||||||    
T  35932321 attatttgcaatgaaataattgagtccaaagtattaagaagataaaaattcagccagccaatc 35932383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 42860383 - 42860523
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagat--aaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttc 210  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||  |||||| | |||||||||||    |   |||  |||| ||||||||||| | |||    
T  42860383 attatttgcaatgaaataattgggtccaaattattaagaagataaaaaaattcgagcagccaatcagcgcgcgccaagtgtctccgtgggccaggcattc 42860482  T
Q  211 aacatgttgaacctcttcaacacctctctcctccaactcac 251  Q
    |||||||||||    |||||||| || ||||||||||||||    
T  42860483 aacatgttgaattgtttcaacacttccctcctccaactcac 42860523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35932198 - 35932278
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| || | |||||| | ||||||||||||||||||  |||| ||||||| ||||||    
T  35932198 taataataagattaagagagtgaaaaacttaattttttttctgtgtccaaatcaaatgatttaagtctctatttatagaga 35932278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 42860561 - 42860601
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattgcactt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  42860561 ttcaacatgttgaatggcaaattcaacatgccattgcactt 42860601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 13817426 - 13817472
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  13817426 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 13817472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 13948073 - 13948139
Alignment:
Q  184 ccacatgtcaccgtgggccagactttcaacatgttgaacctcttcaacacctctctcctccaactca 250  Q
    ||||||||| | | ||||||| |||||||||| ||||| ||||||| ||||||| ||||||||||||    
T  13948073 ccacatgtctctgcgggccaggctttcaacatattgaatctcttcatcacctctttcctccaactca 13948139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26748691 - 26748610
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| | |||| |||||||||||||  ||||||  | ||||||||||||||||| |||||| ||||||| ||||||    
T  26748691 taataataagatgaagatagtgaaaaatttgttttttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 26748610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 43524710 - 43524657
Alignment:
Q  196 gtgggccagactttcaacatgttgaacctcttcaacacctctctcctccaactca 250  Q
    ||||||||| |||| |||||||||||| | |||||||||||||||||||||||||    
T  43524710 gtgggccag-ctttaaacatgttgaacttgttcaacacctctctcctccaactca 43524657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1954981 - 1954906
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctattt 73  Q
    |||||||||| ||||||||||||||| | ||  ||||||   | |||||||||||||||||||||||| |||||||    
T  1954981 taataataagattaagagagtgaaaattatggttttttttttctgtgtccaaatcaaatgatccaagtctctattt 1954906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 42861072 - 42861117
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||    
T  42861072 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 42861117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26631884 - 26631804
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcg-gtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| | |||| ||||||||| |||  |||||||  ||||||||||||||||| |||||| ||||||| ||||||    
T  26631884 taataataagatgaagatagtgaaaaacttggtttttttcctgtgtccaaatcaaatgaaccaagtctctatttatagaga 26631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30470550 - 30470470
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcg-gtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| | |||| ||||||||| |||  |||||||  ||||||||||||||||| |||||| ||||||| ||||||    
T  30470550 taataataagatgaagatagtgaaaaacttggtttttttcctgtgtccaaatcaaatgaaccaagtctctatttatagaga 30470470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 5214172 - 5214211
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctattt 73  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  5214172 ttttttctgtgtccaaatcaaatgatccaagtctctattt 5214211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 175
Target Start/End: Original strand, 5736493 - 5736544
Alignment:
Q  124 tgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||||||||  |||||||||||| ||||||||||||  |||||||||    
T  5736493 tgaaataattgagttgaaattattaagatgataaaaatccagacagccaatc 5736544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 34954931 - 34954880
Alignment:
Q  124 tgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||||||||  |||||||||||| ||||||||||||  |||||||||    
T  34954931 tgaaataattgagttgaaattattaagatgataaaaatccagacagccaatc 34954880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 321
Target Start/End: Complemental strand, 45100445 - 45100410
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattg 321  Q
    |||||||||||||||| |||||||||||||||||||    
T  45100445 ttcaacatgttgaatggcaaattcaacatgccattg 45100410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 5736397 - 5736443
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  5736397 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 5736443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 8449731 - 8449685
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  8449731 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 8449685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 18029041 - 18028995
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  18029041 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 18028995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 34955030 - 34954984
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  34955030 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 34954984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 4625222 - 4625177
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| ||||||||||||||||| |||||| ||||||| |||||    
T  4625222 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagag 4625177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 38204952 - 38204919
Alignment:
Q  47 caaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||||||||||||||| ||||||||||||||    
T  38204952 caaatcaaatgatccaagtctctatttgtagaga 38204919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 43523979 - 43523928
Alignment:
Q  12 ttaagagagtgaaaaatttga--attttttcggtgtccaaatcaaatgatcc 61  Q
    |||||||||||||||||||||   |||||||  |||||||||||||||||||    
T  43523979 ttaagagagtgaaaaatttgatttttttttctatgtccaaatcaaatgatcc 43523928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 44503644 - 44503688
Alignment:
Q  36 ttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||| ||||||||||||||| |||||| | ||||||||||||||    
T  44503644 ttttctgtgtccaaatcaaataatccaattctctatttgtagaga 44503688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 4e-51; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 45549120 - 45548870
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||| ||||||||||||||||         ||||||||||    
T  45549120 taataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaaatttctatttgtagaga-aaaaaaaatcacgaattt 45549022  T
Q  100 tggtnnnnnnnn--------tattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgt 191  Q
    ||||                | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| |||    
T  45549021 tggtaaaaaaaaataattttttttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgt 45548922  T
Q  192 caccgtgggccagactttcaacatgttgaacctcttcaacacctctctcctc 243  Q
    ||  | ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  45548921 caatgcgggccaggctttcaacatgttgaaccttttcaacacctctctcctc 45548870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 113 - 215
Target Start/End: Original strand, 39770184 - 39770285
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||| || || | |||||||||||    
T  39770184 attatttgctatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc-ccctgcgtcagactttcaa 39770282  T
Q  213 cat 215  Q
    |||    
T  39770283 cat 39770285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 38352076 - 38352154
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||| ||||||    
T  38352076 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcagccaatcgtaacaagccacgtgtcac 38352154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 42881945 - 42882117
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||| ||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||| | ||||||| ||||| |        | || |||||    
T  42881945 taatgataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaaatctctatttatagag-gaaaaaaaattacaaattt 42882043  T
Q  100 tggtnnnnnnnntattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||         ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42882044 tggtaaaaaaa--attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 42882117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 20354719 - 20354797
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||||| |||||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||||    
T  20354719 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaaacaggcaatcgtaacaaaccacgtgtcac 20354797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 28317689 - 28317627
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28317689 attatttgcaataaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 28317627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 33508218 - 33508156
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  33508218 attatttgcaatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatc 33508156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 115141 - 115209
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaaca 181  Q
    ||||||||| |||||||||||||||| ||| |||||||| |||||||||| ||||||||||||||||||    
T  115141 attatttgcaatgaaataattgagtccaaaatattaagatgataaaaatcgaagcagccaatcgtaaca 115209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 28317812 - 28317732
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  28317812 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 28317732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 22660327 - 22660382
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagca 168  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  22660327 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagca 22660382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 30720461 - 30720540
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||| |||||||| |||| ||||||| ||||||||||||||||||| |||| ||||||| ||||||    
T  30720461 taataataagattaagagtgtgaaaaacttgatttttttctgtgtccaaatcaaatgatctaagtctctatttatagaga 30720540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32126983 - 32126902
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| ||||||||||||||||| ||| ||||||  | |||||||||||||||||||||||| ||||||||||||||    
T  32126983 taattataagattaagagagtgaaaaatatgatttttttttctgtgtccaaatcaaatgatccaagtctctatttgtagaga 32126902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 331
Target Start/End: Complemental strand, 40300095 - 40299965
Alignment:
Q  199 ggccagactttcaacatgttgaacctcttcaacacctctctcctccaactcacnnnnnnnccaattcaacannnnnnnttacaatgattcaacatgttga 298  Q
    |||||| |||| |||||||||||| | ||||||||||||||| |||||||||        ||| |||||||        ||||||| |||||||||||||    
T  40300095 ggccaggctttaaacatgttgaacttattcaacacctctctcatccaactcagttttttcccatttcaacacccccc--tacaatggttcaacatgttga 40299998  T
Q  299 atgacaaattcaacatgccattgcacttggtct 331  Q
    ||| |||||||||||||||||||||||||||||    
T  40299997 atggcaaattcaacatgccattgcacttggtct 40299965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 47159020 - 47158958
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  47159020 attatttgcaatgaaataattgggtccaaattattaagaaaataaaaatccaagcagccaatc 47158958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40300664 - 40300583
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||| |||||||| ||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| |||||||    
T  40300664 taataataagattaagagaatgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagag 40300583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22660224 - 22660296
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatt 72  Q
    |||||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||    
T  22660224 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatt 22660296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 37952242 - 37952302
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  37952242 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 37952302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 26815590 - 26815649
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  26815590 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 26815649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 32749409 - 32749468
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  32749409 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagtcagccaatc 32749468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33508331 - 33508253
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||| || ||||||||| |||| ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  33508331 taataataagatta-gaaagtgaaaaacttgatttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 33508253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 40690795 - 40690854
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  40690795 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 40690854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26815464 - 26815545
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| ||||||||||||||||| ||| ||||||  | |||||||||||||||||||||||| ||||||| ||||||    
T  26815464 taattataagattaagagagtgaaaaatatgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 26815545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 38351954 - 38352035
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||||||||  ||||||  | ||||| |||||||||||| ||||| ||||||||||||||    
T  38351954 taataataagattaagagagtgaaaaatttggtttttttttctgtgtctaaatcaaatgattcaagtctctatttgtagaga 38352035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 43201546 - 43201484
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||  |||||||||||| || ||||||||||||||||||||    
T  43201546 attatttgcaatgaaataattgagttcaaattattaagatgagaaaaatccaagcagccaatc 43201484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 115015 - 115096
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||| |||||||||||||||| |||| |||||| | |||||||| |||||||||| |||| ||||||| |||||||    
T  115015 taataataagattaagagagtgaaaaacttgatttttttcctgtgtccaagtcaaatgatctaagtctctatttatagagag 115096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 33507939 - 33507886
Alignment:
Q  280 caatgattcaacatgttgaatgacaaattcaacatgccattgcacttggtctaa 333  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  33507939 caatgattcaacatgttgaatgacactttcaacaagccattgcacttggtctaa 33507886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37952117 - 37952197
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||| | ||| |||||| | |||||||||||||||||| ||||| ||||||| ||||||    
T  37952117 taataataagattaagagagtgaaaattatgattttttttctgtgtccaaatcaaatgattcaagtctctatttatagaga 37952197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 38970389 - 38970471
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg---aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||     ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  38970389 taataataagattaagagagtgaaaaacttgtttttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 38970471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 20354598 - 20354677
Alignment:
Q  1 taataataaggttaagagagtgaaaaattt-gaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| ||||||||||||||||||| |  |||||||  ||||||||||||||||| ||||| ||||| |||||||    
T  20354598 taataataagattaagagagtgaaaaatttggttttttttctatgtccaaatcaaatgattcaagtctctatctgtagag 20354677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 36521964 - 36522015
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatcca 164  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  36521964 attatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 36522015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30630367 - 30630286
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| | |||| ||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||| ||||||    
T  30630367 taataataagatgaagatagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 30630286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 32749292 - 32749373
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| ||||||||||||||||| ||| ||||||  | |||||||||||||||| ||||||| ||||||| ||||||    
T  32749292 taattataagattaagagagtgaaaaatatgatttttttttctgtgtccaaatcaaatgttccaagtctctatttatagaga 32749373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 40300231 - 40300185
Alignment:
Q  129 taattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||    
T  40300231 taattgagtctaaattattaagaagataaaaatctaagcagtcaatc 40300185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 331
Target Start/End: Original strand, 22660520 - 22660652
Alignment:
Q  196 gtgggccagactttcaacatgttgaacctcttcaacacctctctcctccaactcacnnnnnnnccaattcaacannnnnnnttacaatgattcaacatgt 295  Q
    |||||||| |||||||||||||||||  | |||||||||| |||||| |||||||        |||||||||||        || |||| ||||||||||    
T  22660520 gtgggccaaactttcaacatgttgaatttgttcaacacctatctccttcaactcagttttttcccaattcaacaccccc---tataatggttcaacatgt 22660616  T
Q  296 tgaatgacaaattcaacatgccattgcacttggtct 331  Q
    |||||  |||||||||||| ||||||||||||||||    
T  22660617 tgaattgcaaattcaacatcccattgcacttggtct 22660652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 30720581 - 30720721
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagat--aaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttc 210  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||  |||||| | |||||||||||    |   |||  |||| ||||||||||| | |||    
T  30720581 attatttgcaatgaaataattgggtccaaattattaagaagataaaaaaattcgagcagccaatcagcgcgcgccaagtgtctccgtgggccaggcattc 30720680  T
Q  211 aacatgttgaacctcttcaacacctctctcctccaactcac 251  Q
    |||||||||||    |||||||| || ||||||||||||||    
T  30720681 aacatgttgaattgtttcaacacttccctcctccaactcac 30720721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 30567075 - 30567134
Alignment:
Q  117 tttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||| ||||||||||| |||| ||| |||||||| ||||||||||||| ||||||||||    
T  30567075 tttgcaatgaaataattaagtccaaaatattaagatgataaaaatccaaacagccaatcg 30567134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36521837 - 36521911
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg--aattttttcggtgtccaaatcaaatgatccaagtttctattt 73  Q
    |||||||||| ||||||||||||||| | ||    ||||||| |||||||||||||||||||||||| |||||||    
T  36521837 taataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctattt 36521911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33078536 - 33078455
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||| ||||||| |||  ||||||  | ||||||||||||||||||| |||| ||||||| ||||||    
T  33078536 taataataagattaagagaatgaaaaacttgttttttttttctgtgtccaaatcaaatgatcaaagtctctatttatagaga 33078455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 47159141 - 47159060
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttga--attttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| |||||||||||||||| ||||   ||||||| ||||||| |||||||||| ||||| ||||||| ||||||    
T  47159141 taatgataagattaagagagtgaaaaacttgatttttttttctgtgtccacatcaaatgattcaagtctctatttatagaga 47159060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 33078415 - 33078351
Alignment:
Q  113 attatttgctatgaaa-taattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||| |||||||||| ||| |||||||| ||||||||| ||||||| ||||||    
T  33078415 attatttgcaatgaaaataattgagtccaaaatattaagatgataaaaattcaagcagtcaatcg 33078351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30566963 - 30567029
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagt 65  Q
    |||||||||| |||||||||| ||||| |||  ||||||  | ||||||||||||||||||||||||    
T  30566963 taataataagattaagagagttaaaaacttggtttttttttctgtgtccaaatcaaatgatccaagt 30567029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 38970505 - 38970568
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| ||||||||||| |||  |||||||||||| |||||||||  || ||||||||||    
T  38970505 attatttgcaatgaaataatttagttcaaattattaagatgataaaaatataaacagccaatcg 38970568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 39770104 - 39770151
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    ||||||| ||||||||||||||||||| |||| ||||||| |||||||    
T  39770104 ttttttctgtgtccaaatcaaatgatctaagtctctatttatagagag 39770151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 40690701 - 40690740
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctattt 73  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  40690701 ttttttctgtgtccaaatcaaatgatccaagtctctattt 40690740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 5813653 - 5813699
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  5813653 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 5813699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 35028517 - 35028471
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  35028517 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 35028471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 37888755 - 37888801
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  37888755 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 37888801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 48985266 - 48985304
Alignment:
Q  42 gtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  48985266 gtgtccaaatcaaatgatccaagtctctatttatagaga 48985304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 22194607 - 22194651
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    ||||||| |||||||||||||||||||||||| | ||||| ||||    
T  22194607 ttttttctgtgtccaaatcaaatgatccaagtctttatttataga 22194651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33379626 - 33379706
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcg-gtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| | |||| ||||||||| |||  ||||||   ||||||||||||||||| |||||| ||||||| ||||||    
T  33379626 taataataagatgaagatagtgaaaaacttggttttttttttgtgtccaaatcaaatgaaccaagtctctatttatagaga 33379706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 33379756 - 33379796
Alignment:
Q  124 tgaaataattgagtctaaattattaagaagataaaaatcca 164  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  33379756 tgaaataattgagttgaaattattaagatgataaaaatcca 33379796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37888178 - 37888260
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg---aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| |||||||||||||||| |||     ||||||| ||||||||||||||||||| || | ||||||| ||||||    
T  37888178 taatgataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatctaaatctctatttatagaga 37888260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 43570839 - 43570795
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||    
T  43570839 ttttttctgtgtccaaatcaaatgaaccaagtctctatttataga 43570795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 6e-50; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 113 - 237
Target Start/End: Complemental strand, 36178090 - 36177966
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||||||    
T  36178090 attatttgctataaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacatgtcactgtgggtcaggctttcaa 36177991  T
Q  213 catgttgaacctcttcaacacctct 237  Q
    |||||||||||||||||||||||||    
T  36177990 catgttgaacctcttcaacacctct 36177966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 51304899 - 51305150
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaat 97  Q
    |||||||||| ||||||||||||||||||||| ||||||   | |||||||||||||||||||||||||||||||||||||| |        ||||||||    
T  51304899 taataataagattaagagagtgaaaaatttgattttttttttctgtgtccaaatcaaatgatccaagtttctatttgtagag-gaaaaaaaatcacgaat 51304997  T
Q  98 tttggtnnnnnnnntat----------tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccac 187  Q
    ||||||         ||          |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||  |||    
T  51304998 tttggtaaaaaaaaaatattttttttttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagtcac 51305097  T
Q  188 atgtcaccgtgggccagactttcaacatgttgaacctcttcaacacctctctc 240  Q
     |||||| |  | |||| ||||||||||||||||||| |||||||||||||||    
T  51305098 gtgtcactgcagaccaggctttcaacatgttgaaccttttcaacacctctctc 51305150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 113 - 342
Target Start/End: Original strand, 29702121 - 29702350
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||  |||  ||||   ||||||||  |||||||    
T  29702121 attatttgcaataaaataattgagtccaaattattaagaagataaaaatccaagcatccaatcaaaacatgccaagtgtctatgtgggccatgctttcaa 29702220  T
Q  213 catgttgaacctcttcaacacctctctcctccaactcacnnnnnnnccaattcaacannnnnnnttacaatgattcaacatgttgaatgacaaattcaac 312  Q
    |||||||||  | |||||||||||||||||||||||||        |||||||||||        ||||||| |||||||||||||||  ||||||||||    
T  29702221 catgttgaatttgttcaacacctctctcctccaactcatatttttcccaattcaacaactccccctacaatggttcaacatgttgaattgcaaattcaac 29702320  T
Q  313 atgccattgcacttggtctaagagagaaac 342  Q
    || ||||||||| | |||||| ||| ||||    
T  29702321 atcccattgcacatagtctaatagataaac 29702350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 41183611 - 41183863
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaatt 98  Q
    |||||||||| |||||||||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||| ||||||         | |||||||    
T  41183611 taataataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga--aaaaaaattacgaatt 41183708  T
Q  99 ttggtnnnnnnnntatta---tttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcacc 195  Q
    |||||         ||||   ||||| |||||||||||||||| |||||||| ||||||||||||| |||| ||||||||  ||||   || ||||| |     
T  41183709 ttggtaaaaaaaaaattaaattttgcaatgaaataattgagtccaaattattgagaagataaaaattcaaggagccaatcaaaacatgtcaaatgtctct 41183808  T
Q  196 gtgggccagactttcaacatgttgaacctcttcaacacctctctcctccaactca 250  Q
    |||| |||| ||||||||||||||||  | |||||||||||||||||||||||||    
T  41183809 gtggaccaggctttcaacatgttgaatttattcaacacctctctcctccaactca 41183863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 51999680 - 51999599
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  51999680 attatttgctatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 51999599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 31169995 - 31169823
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaatt 98  Q
    |||||||||| |||||||||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||||||||||         |||||||||    
T  31169995 taataataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttgtagaga---aaaaaatcacgaatt 31169899  T
Q  99 ttggtnnnnnnnntattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaat 174  Q
    |||||         ||||||| | |||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  31169898 ttggtaaaaaataaattatttacaatgaaataatagagtccaaattattaagaagataaaaatccaagcagccaat 31169823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 49027148 - 49026979
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg---aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaat 97  Q
    |||||||||| ||||||||||||||||||||     ||||||| |||||||||||||||||||||||| ||||| |||||||||        ||||||||    
T  49027148 taataataagattaagagagtgaaaaatttggttttttttttctgtgtccaaatcaaatgatccaagtctctatctgtagagagagaaaaaatcacgaat 49027049  T
Q  98 tttggt--nnnnnnnntattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaa 165  Q
    ||||||           ||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  49027048 tttggtaaaaaaataaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaa 49026979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 12975173 - 12975353
Alignment:
Q  4 taataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattttgg 102  Q
    ||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||||||||||         |||||||||||||    
T  12975173 taataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttgtagaga-aaaataaatcacgaattttgg 12975271  T
Q  103 tnnnnnnnnta-------ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgt 177  Q
    |         |       |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12975272 taaaaataaaaataaaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgt 12975353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 6833081 - 6833159
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||    
T  6833081 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacatgccacgtgtcac 6833159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 35472046 - 35471869
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagag-agnnnnnnnntcacgaatt 98  Q
    |||| ||||| ||||||||||||||||| ||| |||||| | |||||||||||||||||||||||| ||||||||||||| ||        | |||||||    
T  35472046 taattataagattaagagagtgaaaaatatgattttttttctgtgtccaaatcaaatgatccaagtctctatttgtagagaagaaaaaaaattacgaatt 35471947  T
Q  99 ttggtnnnnnnnntatt-atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||         ||| |||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  35471946 ttggtggaaaaaaaattcatttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 35471869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 20140024 - 20140088
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaa 179  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20140024 tatttgcaatgaaataattgagtctaaattattaagaagataaaaatccaagcagcgaatcgtaa 20140088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 6044937 - 6044875
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6044937 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 6044875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 51998969 - 51998710
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| |||||||        | ||||||||    
T  51998969 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagagagaaaaaattacgaattt 51998870  T
Q  100 tggtnnnnnnnnt--------attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgt 191  Q
    ||||        |        ||||||||| |||||||||||| ||| |||||||||||||||| ||||||| |||||||||||    |   |||  |||    
T  51998869 tggtaaaaaatataaaataaaattatttgcaatgaaataattgggtccaaattattaagaagatcaaaatccgagcagccaatcagcgcgcgccaagtgt 51998770  T
Q  192 caccgtgggccagactttcaacatgttgaacctcttcaacacctctctcctccaactcac 251  Q
    | ||||||||||| | ||||||||||||||    |||||||| || ||||||||||||||    
T  51998769 ctccgtgggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcac 51998710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 4873852 - 4873713
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattttggtnnnnnnnntattatttgctatgaaataatt 133  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||         ||||||||||||||         ||||||| | |||||||||||    
T  4873852 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga-aaaaaaaatcacgaattttggtaaaaaaaa-attatttacaatgaaataatt 4873755  T
Q  134 gagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  4873754 gagtccaaattattaagaagataaaaatccaagcagccaatc 4873713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 33187715 - 33187655
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33187715 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 33187655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 48886440 - 48886376
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgt 177  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  48886440 attatttgcaatgaaataatcgagtccaaattattaagaagataaaaatccaagcagccaatcgt 48886376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 50734357 - 50734437
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  50734357 taataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 50734437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 50778498 - 50778418
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  50778498 taataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 50778418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 36178211 - 36178133
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| | |||| |||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||    
T  36178211 taataataagatcaagaaagtgaaaaatttgattttttttg-tgtccaaatcaaatgatccaagtttctatttgtagaga 36178133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 55027222 - 55027285
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  55027222 attatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcg 55027285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 10424267 - 10424205
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10424267 attattttcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 10424205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 32120042 - 32119980
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  32120042 attatttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatc 32119980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 42564410 - 42564472
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  42564410 attatttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatc 42564472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 11908499 - 11908556
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaa 173  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11908499 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaa 11908556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11908377 - 11908458
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg---aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| ||||||||||||||||||||     ||||||| |||||||||||||||||||||||| |||||||||||||    
T  11908377 taataataagattaagagagtgaaaaatttggttttttttttctgtgtccaaatcaaatgatccaagtctctatttgtagag 11908458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37182798 - 37182717
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||| ||||||    
T  37182798 taataataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 37182717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 44084773 - 44084835
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  44084773 attatttgcaatgaaataattggttccaaattattaagaagataaaaatccaagcagccaatc 44084835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 43475880 - 43475941
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  43475880 tatttgcaataaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcg 43475941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6045061 - 6044981
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  6045061 taatgataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 6044981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 37182680 - 37182620
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  37182680 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 37182620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42564287 - 42564367
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| |||||| | ||||||||||||||||||| |||| ||||||| ||||||    
T  42564287 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatctaagtctctatttatagaga 42564367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 27848049 - 27848100
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatcca 164  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  27848049 attatttgcaatgaaataattgagtctaaagtattaagaagataaaaatcca 27848100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4046461 - 4046542
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| ||||||  | |||||||||||||||||| ||||| ||||||| ||||||    
T  4046461 taataataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgattcaagtctctatttatagaga 4046542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 4046584 - 4046722
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    ||||||||| |||||||||||   || |||||||||||||||||||||||| |||||||||||  ||||  |||  |||| |||||| |||  | |||||    
T  4046584 attatttgcaatgaaataattcgatccaaattattaagaagataaaaatccgagcagccaatcaaaacatgccaagtgtctccgtggaccatgcattcaa 4046683  T
Q  213 catgttgaacctcttcaacacctctctcctccaactcac 251  Q
    |||||||||    |||||||| || ||||| ||||||||    
T  4046684 catgttgaattgtttcaacacttccctccttcaactcac 4046722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32120168 - 32120087
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||| || |||| ||||||  | |||||||||||||||||||||||| ||||||| ||||||    
T  32120168 taataataagattaagagagtgaataacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 32120087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44084649 - 44084730
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||| || |||| ||||||  | |||||||||||||||||||||||| ||||||| ||||||    
T  44084649 taataataagattaagagagtgaataacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 44084730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 7008576 - 7008637
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||||  |||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  7008576 ttatttgtaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatc 7008637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26162268 - 26162187
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||| ||||| ||||||||||||| ||| ||| |||||| | |||||||||||||||||||||||| ||||||| |||||||    
T  26162268 taattataagattaagagagtgaagaatatgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagag 26162187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29701996 - 29702077
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    ||||||| || |||||||||||||||| |||| |||||| | || ||||||||||||||||||||| ||||||| |||||||    
T  29701996 taataatgagattaagagagtgaaaaacttgattttttttctgtatccaaatcaaatgatccaagtctctatttatagagag 29702077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 48886558 - 48886481
Alignment:
Q  4 taataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| |||||||||||||||| |||  |||||| | ||||||||||||||||||| |||| ||||||||||||||    
T  48886558 taataagattaagagagtgaaaaacttggttttttttctgtgtccaaatcaaatgatcaaagtctctatttgtagaga 48886481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 50415410 - 50415361
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatcca 164  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  50415410 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatcca 50415361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 50734483 - 50734544
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||||| || ||||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  50734483 ttatttgcaataaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 50734544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 50778372 - 50778311
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||||| || ||||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  50778372 ttatttgcaataaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 50778311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6832953 - 6833035
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg---aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||     ||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  6832953 taataataagattaagagagtgaaaaacttggttttttttttctgtgttcaaatcaaatgatccaagtctctatttgtagaga 6833035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20139898 - 20139978
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttga-attttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| ||||  |||||||  ||| ||||||||||||||||||| ||||||| ||||||    
T  20139898 taataataagattaagagagtgaaaaacttgattttttttctctgttcaaatcaaatgatccaagtctctatttatagaga 20139978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 35540178 - 35540110
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaaca 181  Q
    ||||||||| |||||||||||||||| ||| |||| ||| ||||| |||| ||||||||||||||||||    
T  35540178 attatttgcaatgaaataattgagtccaaaatattgagatgataagaatcgaagcagccaatcgtaaca 35540110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 46136886 - 46136818
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaaca 181  Q
    ||||||||| |||||||||||||||| ||| |||||||| |||||||||| |||||  |||||||||||    
T  46136886 attatttgcaatgaaataattgagtccaaaatattaagatgataaaaatcaaagcaatcaatcgtaaca 46136818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 55027104 - 55027184
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||  |||||||||||||||| |||  |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  55027104 taataataatattaagagagtgaaaaacttggttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 55027184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 30415065 - 30415014
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatcca 164  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  30415065 attatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 30415014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 26162149 - 26162103
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatc 162  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||    
T  26162149 atttgcaatgaaataattgagtccaaattattaagaagataaaaatc 26162103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30415191 - 30415110
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg--aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||| | ||    ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  30415191 taataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 30415110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 38571757 - 38571700
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaa 173  Q
    |||||| || ||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  38571757 atttgcaataaaataattgagtccaaaatattaagatgataaaaatccaagcagccaa 38571700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10424385 - 10424303
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| |||||||||||||||| |||| ||||||   | ||||||||||||||| |||||||| ||||||| ||||||    
T  10424385 taatgataagattaagagagtgaaaaacttgattttttttttctgtgtccaaatcaaataatccaagtctctatttatagaga 10424303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 35540298 - 35540216
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg---aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||    |||||||| ||||| ||||||||| |||||||| ||||||| ||||||    
T  35540298 taataataagattaagagagtgaaaaacttggtttattttttctgtgtcaaaatcaaattatccaagtctctatttatagaga 35540216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 46137001 - 46136921
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||| ||| |||||||||||||||| |||| |||||| |  |||||||||||||| |||||||| ||||||| ||||||    
T  46137001 taataaaaagattaagagagtgaaaaacttgattttttttctatgtccaaatcaaattatccaagtctctatttatagaga 46136921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 51999476 - 51999432
Alignment:
Q  206 ctttcaacatgttgaacctcttcaacacctctctcctccaactca 250  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  51999476 ctttcaacatgttgaacctattcaacacctctttcctccaactca 51999432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 4873494 - 4873439
Alignment:
Q  278 tacaatgattcaacatgttgaatgacaaattcaacatgccattgcacttggtctaa 333  Q
    |||||||||||||||||||||||| ||  ||||||| ||||||| |||||||||||    
T  4873494 tacaatgattcaacatgttgaatggcactttcaacaagccattgtacttggtctaa 4873439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7520859 - 7520780
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||| ||||| ||| |||| ||||||  ||||||||||||||| | |||||| ||||||| ||||||    
T  7520859 taataataagattaagatagtgacaaacttgattttttttagtgtccaaatcaaataaaccaagtctctatttatagaga 7520780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 15007653 - 15007716
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||||||||||||| ||| |||| ||| |||||||||  |||||||||||||    
T  15007653 attatttgcaatgaaataattgagtccaaaatatttagatgataaaaattgaagcagccaatcg 15007716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43475756 - 43475840
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg----aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||| |||||||||||||||| |||      ||||||| ||||||||||||||||||| |||| ||||||| |||||||    
T  43475756 taataataagattaagagagtgaaaaacttggtttttttttttctgtgtccaaatcaaatgatcaaagtctctatttatagagag 43475840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 49406943 - 49406880
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||||||||||||  |||||||||||| |||||||||| | |||| ||||||    
T  49406943 attatttgcaatgaaataattgagttcaaattattaagatgataaaaatctatgcagtcaatcg 49406880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 49822643 - 49822597
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  49822643 ttttttctgtgtccaaatcaaattatccaagtttctatttatagaga 49822597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 25787454 - 25787409
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||    
T  25787454 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 25787409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 25829411 - 25829366
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||    
T  25829411 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 25829366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 33934941 - 33934896
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||    
T  33934941 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 33934896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 42598109 - 42598064
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||    
T  42598109 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 42598064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 6833274 - 6833326
Alignment:
Q  198 gggccagactttcaacatgttgaacctcttcaacacctctctcctccaactca 250  Q
    ||||||| |||||||||||||||||||||||| || |||| ||||| ||||||    
T  6833274 gggccaggctttcaacatgttgaacctcttcatcatctctttcctcaaactca 6833326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 38571880 - 38571796
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-----cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||| ||||||| |||  ||||||     | |||||||||||||||||||||||| ||||||| ||||||    
T  38571880 taataataagattaagagaatgaaaaacttggtttttttttttcctgtgtccaaatcaaatgatccaagtctctatttatagaga 38571796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 47700543 - 47700499
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaa 160  Q
    |||||| ||||||||||||||| ||||||||||||| ||||||||    
T  47700543 atttgcaatgaaataattgagtttaaattattaagatgataaaaa 47700499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 49086477 - 49086557
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| | |||| ||||||||| |||| |||||| | ||||||||||||||||| |||| | ||||||| ||||||    
T  49086477 taataataagatgaagatagtgaaaaacttgattttttttctgtgtccaaatcaaatgaaccaaatctctatttatagaga 49086557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 50415538 - 50415466
Alignment:
Q  1 taataataaggttaagagagtgaaaaat-ttgaattttttcggtgtccaaatcaaatgatccaagtttctatt 72  Q
    |||||||||| ||||||||||||||| | | |  ||||||| |||||||||||||||||||||| | ||||||    
T  50415538 taataataagattaagagagtgaaaattatggttttttttctgtgtccaaatcaaatgatccaaatctctatt 50415466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33187841 - 33187767
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctattt 73  Q
    |||||||||| || ||||||||||||| |||  ||||||  | ||||||||||||||| |||||||| |||||||    
T  33187841 taataataagatttagagagtgaaaaacttggtttttttttctgtgtccaaatcaaataatccaagtctctattt 33187767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 49356887 - 49356836
Alignment:
Q  124 tgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||||||||  |||||||||||| ||||||||||||  |||||||||    
T  49356887 tgaaataattgagttgaaattattaagatgataaaaatccagacagccaatc 49356836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 321
Target Start/End: Complemental strand, 51998667 - 51998632
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattg 321  Q
    |||||||||||||||| |||||||||||||||||||    
T  51998667 ttcaacatgttgaatggcaaattcaacatgccattg 51998632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 5844717 - 5844671
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  5844717 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 5844671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 17469791 - 17469837
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  17469791 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 17469837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 42602245 - 42602291
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  42602245 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 42602291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 47147648 - 47147694
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  47147648 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 47147694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 50034667 - 50034713
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  50034667 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 50034713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 7008494 - 7008539
Alignment:
Q  35 tttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||| || ||||||||||||||||||||| ||||||| ||||||    
T  7008494 tttttctgtatccaaatcaaatgatccaagtctctatttatagaga 7008539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 7520749 - 7520700
Alignment:
Q  126 aaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||||||||| ||||||||||||  ||||||||||||| || ||||||    
T  7520749 aaataattgagtttaaattattaagttgataaaaatccaaacacccaatc 7520700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 25450179 - 25450134
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| ||||||||||||||||| |||||| ||||||| |||||    
T  25450179 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagag 25450134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 27847960 - 27848005
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| ||||| |||||||||||||||||| ||||||| |||||    
T  27847960 ttttttctgtgtcaaaatcaaatgatccaagtctctatttatagag 27848005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 51436002 - 51436047
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| ||||||||||||||||||| |||| ||||||| |||||    
T  51436002 ttttttctgtgtccaaatcaaatgatctaagtctctatttatagag 51436047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 51999798 - 51999731
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg---aattttttcggtgtccaaatcaaatgatccaagt 65  Q
    |||||||||| ||||||||||||||| ||||     ||||||| |||||||||| |||||||||||||    
T  51999798 taataataagattaagagagtgaaaattttggttttttttttctgtgtccaaatgaaatgatccaagt 51999731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 28410769 - 28410813
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||    
T  28410769 ttttttctgtgtccaaatcaaatgaaccaagtctctatttataga 28410813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33751652 - 33751734
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| | |||| ||||||||| |||| ||||||   | ||| ||||||||||||| |||||| ||||||| ||||||    
T  33751652 taataataagatgaagatagtgaaaaacttgattttttttttctgtgcccaaatcaaatgaaccaagtctctatttatagaga 33751734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 35852937 - 35852893
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||    
T  35852937 ttttttctgtgtccaaatcaaatgaaccaagtctctatttataga 35852893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 43022978 - 43023022
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||    
T  43022978 ttttttctgtgtccaaatcaaatgaaccaagtctctatttataga 43023022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 51974620 - 51974664
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    ||||||| | ||||||||||||||| |||||||||||||| ||||    
T  51974620 ttttttctgcgtccaaatcaaatgaaccaagtttctatttataga 51974664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 4e-48; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 13479198 - 13479069
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaac 213  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||| |||| |||||| | ||||||||||||||||    
T  13479198 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtcactgcgggccagactttcaac 13479099  T
Q  214 atgttgaacctcttcaacacctctctcctc 243  Q
    ||||||||||| ||||||||||||||||||    
T  13479098 atgttgaaccttttcaacacctctctcctc 13479069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 39239009 - 39239138
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaac 213  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| |||| |||||| | ||||||| ||||||||    
T  39239009 ttatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcataacaagccacgtgtcactgcgggccaggctttcaac 39239108  T
Q  214 atgttgaacctcttcaacacctctctcctc 243  Q
    ||||||||||| ||||||||||||||||||    
T  39239109 atgttgaaccttttcaacacctctctcctc 39239138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 113 - 321
Target Start/End: Complemental strand, 13592527 - 13592319
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    ||||||| | |||||||||||||||| |||||||||||||| ||||||||| |||||||||||  ||||  |||  |||| ||||||||||| | |||||    
T  13592527 attattttcaatgaaataattgagtccaaattattaagaagttaaaaatccgagcagccaatcaaaacatgccaagtgtctccgtgggccaggcattcaa 13592428  T
Q  213 catgttgaacctcttcaacacctctctcctccaactcacnnnnnnnccaattcaacannnnnnnttacaatgattcaacatgttgaatgacaaattcaac 312  Q
    |||||||||    |||||||| || ||||||||||||||       ||| |||||||        ||||||| |||||||||||||||| ||||||||||    
T  13592427 catgttgaattgtttcaacacttccctcctccaactcacttttttcccatttcaacaccctcccctacaatggttcaacatgttgaatggcaaattcaac 13592328  T
Q  313 atgccattg 321  Q
    |||||||||    
T  13592327 atgccattg 13592319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 25670423 - 25670342
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  25670423 attatttgctatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 25670342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 3455287 - 3455365
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3455287 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacatgtcac 3455365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 4219148 - 4218952
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaatt 98  Q
    |||||||||| ||||||||||||||||||||| ||||||  | |||||||||||||||||||||||| ||||||||||||||         |||||||||    
T  4219148 taataataagattaagagagtgaaaaatttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttgtagaga--aaaaaaatcacgaatt 4219051  T
Q  99 ttggtnnnnnnnnt---attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||||        |   || |||||| |||||||||||||||| |||||||||||||||||||||| ||||||  |||| ||||||| |||| ||||||    
T  4219050 ttggtaaaaaaaataaaataatttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcaaacaattgtaacaagccacgtgtcac 4218952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 113 - 324
Target Start/End: Original strand, 7651440 - 7651650
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||   ||  ||||   ||||||||  |||||||    
T  7651440 attatttgcaataaaataattgagtccaaattattaagaagataaaaatccaagcatccaatcaaaacatgtcaagtgtctatgtgggccatgctttcaa 7651539  T
Q  213 catgttgaacctcttcaacacctctctcctccaactcacnnnnnnnccaattcaacannnnnnnttacaatgattcaacatgttgaatgacaaattcaac 312  Q
    |||||||||  | |||||||||||||||||||||||||        |||||||||||        ||||||| |||||||||||||||  ||||||||||    
T  7651540 catgttgaatttgttcaacacctctctcctccaactcatatttttcccaattcaacaacccccc-tacaatggttcaacatgttgaattgcaaattcaac 7651638  T
Q  313 atgccattgcac 324  Q
    || |||||||||    
T  7651639 atcccattgcac 7651650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 9958146 - 9958227
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||| |||| ||||||    
T  9958146 attatttgctatgaaataattgagtccaaattattaagaagataaaaattcaagcaaccaatcgtaacaagccacgtgtcac 9958227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 113 - 324
Target Start/End: Complemental strand, 31008007 - 31007798
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    ||||||||| || ||||||||||||| |||||||||| |||||||||||||||||| ||||||  ||||  |||  ||||   ||||||||  |||||||    
T  31008007 attatttgcaataaaataattgagtccaaattattaaaaagataaaaatccaagcatccaatcaaaacatgccaagtgtctatgtgggccatgctttcaa 31007908  T
Q  213 catgttgaacctcttcaacacctctctcctccaactcacnnnnnnnccaattcaacannnnnnnttacaatgattcaacatgttgaatgacaaattcaac 312  Q
    |||||||||    |||||||||||||||||||||||||        |||||||||||        ||||||| |||||||||||||||  ||||||||||    
T  31007907 catgttgaattagttcaacacctctctcctccaactcatatttttcccaattcaacaaccccc--tacaatggttcaacatgttgaattgcaaattcaac 31007810  T
Q  313 atgccattgcac 324  Q
    || |||||||||    
T  31007809 attccattgcac 31007798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 39238886 - 39238961
Alignment:
Q  2 aataataaggttaagagagtgaaaaatttgaatttt-ttcggtgtccaaatcaaatgatccaagtttctatttgta 76  Q
    ||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  39238886 aataataagattaagagagtgaaaaatttgatttttattctgtgtccaaatcaaatgatccaagtttctatttgta 39238961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 19241774 - 19241836
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19241774 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 19241836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 32363068 - 32363004
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgt 177  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  32363068 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagtagccaatcgt 32363004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13479326 - 13479243
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttga-----attttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| |||||||||||||||||||||      ||||||| ||||||||||||||||||||||||||||||||||||||    
T  13479326 taataataagattaagagagtgaaaaatttgattttttttttttctgtgtccaaatcaaatgatccaagtttctatttgtagag 13479243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 251
Target Start/End: Complemental strand, 23648673 - 23648535
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    ||||||| | |||||||||||   || |||||||||||||||||||||| | |||||||||||  ||||  |||  |||| ||||||||||||| |||||    
T  23648673 attatttacaatgaaataattagatccaaattattaagaagataaaaatacgagcagccaatcaaaacatgccaagtgtctccgtgggccagacattcaa 23648574  T
Q  213 catgttgaacctcttcaacacctctctcctccaactcac 251  Q
    |||||||||    |||||||| || ||||||||||||||    
T  23648573 catgttgaattgtttcaacacttccctcctccaactcac 23648535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 23809899 - 23810037
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    ||||||| | |||||||||||   || |||||||||||||||||||||| | |||||||||||  ||||  |||  |||| ||||||||||||| |||||    
T  23809899 attatttacaatgaaataattagatccaaattattaagaagataaaaatacgagcagccaatcaaaacatgccaagtgtctccgtgggccagacattcaa 23809998  T
Q  213 catgttgaacctcttcaacacctctctcctccaactcac 251  Q
    |||||||||    |||||||| || ||||||||||||||    
T  23809999 catgttgaattgtttcaacacttccctcctccaactcac 23810037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 29616091 - 29616031
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  29616091 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatc 29616031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19241650 - 19241729
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| |||||||||||||||| |||| |||||||  ||||||||||||||||||||||| ||||||| ||||||    
T  19241650 taatgataagattaagagagtgaaaaacttgatttttttctatgtccaaatcaaatgatccaagtctctatttatagaga 19241729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 39008972 - 39009031
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  39008972 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagtagccaatc 39009031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 42804402 - 42804340
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| |||| ||||||||    
T  42804402 attatttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagtagccaatc 42804340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 23090000 - 23090057
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaa 173  Q
    |||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  23090000 atttgcaatgaaataattgagtccaaattattaagaagataaaactccaagcagccaa 23090057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 27405799 - 27405739
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaa 173  Q
    ||||||||| |||||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  27405799 attatttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaa 27405739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31008132 - 31008052
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| || |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  31008132 taataatgagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 31008052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42318226 - 42318306
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttga-attttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||||||||  ||||||| ||||||||||||||||||  |||| ||||||| ||||||    
T  42318226 taataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatttaagtctctatttatagaga 42318306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 42804205 - 42804073
Alignment:
Q  199 ggccagactttcaacatgttgaacctcttcaacacctctctcctccaactcacnnnnnnnccaattcaacannnnnnnttacaatgattcaacatgttga 298  Q
    ||||||||||||||||| ||| |  | |||||||||||||||||||||||||        |||||||||||        |||||||||||||||||||||    
T  42804205 ggccagactttcaacatattgtatttgttcaacacctctctcctccaactcagatttttcccaattcaacaaccccc--tacaatgattcaacatgttga 42804108  T
Q  299 atgacaaattcaacatgccattgcacttggtctaa 333  Q
    ||  |||||||||||| ||||||||| ||||||||    
T  42804107 attgcaaattcaacatcccattgcacatggtctaa 42804073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 42804512 - 42804440
Alignment:
Q  5 aataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtag 77  Q
    |||||| |||||||||||||||| |||| ||||||| |||||||||||||||||| ||||| ||||||| |||    
T  42804512 aataagattaagagagtgaaaaacttgatttttttctgtgtccaaatcaaatgattcaagtctctatttatag 42804440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23089874 - 23089953
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| ||||||||||||||| ||||  |||||| | |||||||||| ||||||||||||| |||||||||||||    
T  23089874 taataataagattaagagagtgaaaattttggttttttttctgtgtccaaattaaatgatccaagtctctatttgtagag 23089953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 25670538 - 25670459
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||||||   ||||||  |||||||||| ||||||||||||| ||||||| ||||||    
T  25670538 taataataagattaagagagtgaaaaatttattttttttatgtgtccaaatgaaatgatccaagtctctatttatagaga 25670459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13592645 - 13592564
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||| | |||||||||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||| ||||||    
T  13592645 taataatatgattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 13592564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 42318350 - 42318412
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||  |||||||||    
T  42318350 attatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccagccagccaatc 42318412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 23648490 - 23648445
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattgcacttggtct 331  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  23648490 ttcaacatgttgaatggcaaattcaacatgccattgcacttggtct 23648445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 23810082 - 23810127
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattgcacttggtct 331  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  23810082 ttcaacatgttgaatggcaaattcaacatgccattgcacttggtct 23810127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 32363186 - 32363107
Alignment:
Q  4 taataaggttaagagagtgaaaaatttg---aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| |||||||||||||||| |||     ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  32363186 taataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaagtctctatttgtagaga 32363107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 40892132 - 40892301
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaatt 98  Q
    |||||||||| ||||||||||||||| | ||  ||||||  | |||||||||||||||||||||||| ||||||| ||||||         |||||||||    
T  40892132 taataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaaatcacgaatt 40892231  T
Q  99 ttggtnnnnnnnnt----attatttgctatgaaataattgagtctaaattattaagaagataaaaatcca 164  Q
    |||||             ||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  40892232 ttggtgaaaaaaaataaaattatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 40892301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3455170 - 3455242
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctattt 73  Q
    |||| ||||| ||||||||| ||||||| ||| ||||||  |||||||||||||||||||||||| |||||||    
T  3455170 taattataagattaagagagggaaaaatatgatttttttttgtgtccaaatcaaatgatccaagtctctattt 3455242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4938432 - 4938512
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||  |||||| | |||||||||||||||||||||||| | ||||| ||||||    
T  4938432 taataataagattaagagagtgaaaaacttggttttttttctgtgtccaaatcaaatgatccaagtctttatttatagaga 4938512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 30644654 - 30644586
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaaca 181  Q
    ||||||||| |||||||||||||||| ||| |||||||| ||||||||| ||| |||||||||| ||||    
T  30644654 attatttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaaccagccaatcgaaaca 30644586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 27405916 - 27405837
Alignment:
Q  1 taataataaggttaagagagtgaaaaattt-gaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| ||||||||||||||||||| |  ||||||| ||||||||||||||||||  |||| ||||||| |||||    
T  27405916 taataataagattaagagagtgaaaaatttggttttttttctgtgtccaaatcaaatgatttaagtctctatttatagag 27405837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 27945962 - 27946041
Alignment:
Q  1 taataataaggttaagagagtgaaaaat-ttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| ||||||||||||||| | | |  ||||||| |||||||||||||||||||||||| ||||||| |||||    
T  27945962 taataataagattaagagagtgaaaattatggttttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 27946041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 27946079 - 27946130
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatcca 164  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  27946079 attatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 27946130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 32972992 - 32972941
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatcca 164  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  32972992 attatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 32972941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 36572004 - 36571945
Alignment:
Q  117 tttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||| ||||||||||||| || ||| |||||||| ||||||||||||||||||||||||    
T  36572004 tttgcaatgaaataattgaatccaaaatattaagatgataaaaatccaagcagccaatcg 36571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 29615797 - 29615755
Alignment:
Q  289 aacatgttgaatgacaaattcaacatgccattgcacttggtct 331  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  29615797 aacatgttgaatggcaaattcaacatgccattgcacttggtct 29615755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32973118 - 32973037
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg--aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||| | ||    ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  32973118 taataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 32973037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9958024 - 9958104
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||| ||||| ||||||||||||||||| ||| ||||||  | |||| ||||||||||||||||||| ||||||| |||||    
T  9958024 taattataagattaagagagtgaaaaatatgatttttttttctgtgttcaaatcaaatgatccaagtctctatttatagag 9958104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31011810 - 31011730
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| | |||| |||||||||||||  ||||||  | |||||||||||||||||||||||| ||||||| |||||    
T  31011810 taataataagatgaagatagtgaaaaatttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 31011730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23648792 - 23648712
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||| || ||||| |||| |||||| | ||||||||||||||||||| |||| ||||||| ||||||    
T  23648792 taataataagattaagagggtaaaaaacttgattttttttctgtgtccaaatcaaatgatctaagtctctatttatagaga 23648712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 23809780 - 23809860
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||| || ||||| |||| |||||| | ||||||||||||||||||| |||| ||||||| ||||||    
T  23809780 taataataagattaagagggtaaaaaacttgattttttttctgtgtccaaatcaaatgatctaagtctctatttatagaga 23809860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 14279286 - 14279349
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||||||||||||  |||||||||||| ||||||||| ||| |||| |||||    
T  14279286 attatttgcaatgaaataattgagttcaaattattaagatgataaaaattcaaacagctaatcg 14279349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 21368629 - 21368675
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  21368629 ttttttctgtgtccaaatcaaatgaaccaagtttctatttatagaga 21368675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 4580384 - 4580429
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||    
T  4580384 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 4580429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 12913205 - 12913270
Alignment:
Q  13 taagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    ||||| |||||||||||||  ||||||| ||||||||||||||||| |||||| | ||||| ||||    
T  12913205 taagatagtgaaaaatttggtttttttctgtgtccaaatcaaatgaaccaagtctttatttataga 12913270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 7651330 - 7651394
Alignment:
Q  17 agagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||| |||||| | || ||||||||||||||||||||| ||||||| ||||||    
T  7651330 agagtgaaaattttgattttttttctgtatccaaatcaaatgatccaagtctctatttatagaga 7651394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14279175 - 14279254
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    |||||||||  |||||| |||||||||||||  ||||||  | ||||||||||||||||| |||||| ||||||| ||||    
T  14279175 taataataatattaagatagtgaaaaatttggtttttttttctgtgtccaaatcaaatgaaccaagtctctatttataga 14279254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 25670221 - 25670169
Alignment:
Q  198 gggccagactttcaacatgttgaacctcttcaacacctctctcctccaactca 250  Q
    |||| |||||||||||||||||||||| | |||||||||| | ||||||||||    
T  25670221 gggctagactttcaacatgttgaacctatacaacacctcttttctccaactca 25670169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30644769 - 30644687
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg---aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||| ||||||||||| |||     ||||||| |||||||||||||||||||||||| || |||| ||||||    
T  30644769 taataataagattaaaagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaagtctcaatttatagaga 30644687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41152606 - 41152526
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| | |||| ||||||||| |||  |||||| | ||||||||||||||||| |||||| ||||||| ||||||    
T  41152606 taataataagatgaagatagtgaaaaacttgtttttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 41152526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 25033563 - 25033609
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  25033563 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 25033609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 25653199 - 25653245
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  25653199 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 25653245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 29615899 - 29615845
Alignment:
Q  196 gtgggccagactttcaacatgttgaacctcttcaacacctctctcctccaactca 250  Q
    ||||||||| ||||||||||||||||    || ||||||||||||||||||||||    
T  29615899 gtgggccaggctttcaacatgttgaattgattgaacacctctctcctccaactca 29615845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 29616180 - 29616134
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||||| |||| ||||||| ||||||    
T  29616180 ttttttctgtgtccaaatcaaatgatcaaagtctctatttatagaga 29616134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 34529018 - 34528960
Alignment:
Q  117 tttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||| |||||||||||||||  |||||||||||| ||||||||| || ||||| ||||    
T  34529018 tttgcaatgaaataattgagttcaaattattaagatgataaaaattcaggcagctaatc 34528960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34529144 - 34529066
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcg-gtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    |||||| ||| |||||| ||||||||| |||| ||||||   ||||||||||||||||| |||||| ||||||| ||||    
T  34529144 taataacaagattaagatagtgaaaaacttgattttttttttgtgtccaaatcaaatgaaccaagtctctatttataga 34529066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 36572089 - 36572051
Alignment:
Q  42 gtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  36572089 gtgtccaaatcaaatgatccaagtctctatttatagaga 36572051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 4938558 - 4938607
Alignment:
Q  127 aataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    |||||||||||  |||||||||||| |||||||||  |||||||||||||    
T  4938558 aataattgagttcaaattattaagatgataaaaatttaagcagccaatcg 4938607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 12913308 - 12913352
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaa 160  Q
    |||||| ||||||||||||||| ||||||||||||  ||||||||    
T  12913308 atttgcaatgaaataattgagtttaaattattaagttgataaaaa 12913352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 7762912 - 7762727
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||| ||||||||||||||         ||||||||||    
T  7762912 taataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtctctatttgtagaga-aaaaaaaatcacgaattt 7762814  T
Q  100 tggtnnnnnnnntattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccac 187  Q
    ||||         || ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  7762813 tggtaaaaaaaaaat-atttgctatgaaataattgagtccaaattattaagaagataaaaattcaagcagtcaatcgtaacaagccac 7762727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 44280459 - 44280710
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| ||||||         | ||||||||    
T  44280459 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatt-acgaattt 44280557  T
Q  100 tggtnnnnnnnnta-ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtg 198  Q
    ||||         | |||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||||  ||||   ||  |||| |||||    
T  44280558 tggtaaaaataaaaattatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcaaaacatgtcaagtgtctccgtg 44280657  T
Q  199 ggccagactttcaacatgttgaacctcttcaacacctctctcctccaactcac 251  Q
    |||||| | ||||||||||||||    |||||||| || ||||||||||||||    
T  44280658 ggccaggcattcaacatgttgaattgtttcaacacttccctcctccaactcac 44280710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 17486269 - 17486339
Alignment:
Q  124 tgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||| ||||||    
T  17486269 tgaaataattgagtccaaattattaagaagataaaaattcaagcagccaattgtaacaaaccacgtgtcac 17486339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 22349507 - 22349445
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22349507 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 22349445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 43022148 - 43022210
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43022148 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 43022210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 9118285 - 9118348
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  9118285 attatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcg 9118348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 17928807 - 17928748
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17928807 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 17928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 36527279 - 36527417
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||||    |   |||  |||| ||||||||||| | |||||    
T  36527279 attatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcagcgcgcgccaagtgtctccgtgggccaggcattcaa 36527378  T
Q  213 catgttgaacctcttcaacacctctctcctccaactcac 251  Q
    |||||||||    |||||||| || ||||||||||||||    
T  36527379 catgttgaattgtttcaacacttccctcctccaactcac 36527417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 6363840 - 6363913
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaacca 186  Q
    ||||||||| || ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||| ||||    
T  6363840 attatttgcaattaaataattgagtctaaaatattaagatgataaaaatcgaagcagccaatcgtaacatacca 6363913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 14383312 - 14383391
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| |||||    
T  14383312 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 14383391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 39490592 - 39490651
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  39490592 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcagccaatc 39490651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1072792 - 1072711
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcg--gtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| |||||||   |||||||||||||||||||||||| ||||||| ||||||    
T  1072792 taataataagattaagagagtgaaaaacttgatttttttctctgtgtccaaatcaaatgatccaagtctctatttatagaga 1072711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4279433 - 4279514
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| ||||||  | ||||| |||||||||||||||||| ||||||||||||||    
T  4279433 taataataagattaagagagtgaaaaacttgatttttttttctgtgtcaaaatcaaatgatccaagtctctatttgtagaga 4279514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 5144979 - 5144901
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| |   ||||||||||||    
T  5144979 atttgcaatgaaataatcgagtccaaattattaagaagataaaaatcgaagcagccaatcgtgaagtaccacatgtcac 5144901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 1072673 - 1072612
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaat 174  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  1072673 attatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagtcaat 1072612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 13151223 - 13151142
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    ||||||||| |||||||||||||||  |||||||||||| |||||||||| ||||||||||||| |||   |||||||||||    
T  13151223 attatttgcaatgaaataattgagttcaaattattaagatgataaaaatctaagcagccaatcgaaacgcgccacatgtcac 13151142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 14383439 - 14383500
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  14383439 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 14383500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 17928936 - 17928854
Alignment:
Q  2 aataataaggttaagagagtgaaaaatttg----aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||||| ||||||||||||||||||||      ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  17928936 aataataagattaagagagtgaaaaatttggtttttttttttctgtgtccaaatcaaatgatccaagtctctatttgtagaga 17928854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 36209192 - 36209023
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaatt 98  Q
    |||||||||  ||||||||||||||||| | | ||||||  | ||||| |||||||||||||||||| ||||||||||||||         |||| ||||    
T  36209192 taataataatattaagagagtgaaaaatatcatttttttttctgtgtctaaatcaaatgatccaagtctctatttgtagaga-aaaaaaaatcacaaatt 36209094  T
Q  99 ttggtnnnnnnnntattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||         || |||||| |||||||||||||||| ||||||||||||||||||||||||||  ||||||||    
T  36209093 ttggtaaa------atcatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaaaagccaatc 36209023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 22349631 - 22349551
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  22349631 taatgataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 22349551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 36527161 - 36527243
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| ||||||   | |||||||||||||||||||||||| ||||||| ||||||    
T  36527161 taataataagattaagagagtgaaaaacttgattttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 36527243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 1308289 - 1308236
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcag 169  Q
    |||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  1308289 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcag 1308236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 7585138 - 7585087
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatcca 164  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  7585138 attatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 7585087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 1308376 - 1308330
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  1308376 ttttttctgtgtccaaatcaaatgatccaagtctctatttgtagaga 1308330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7585264 - 7585183
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg--aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||| | ||    ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  7585264 taataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 7585183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9118166 - 9118247
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||  |||||||||||||||| |||  ||||||  | |||||||||||||||||||||||| ||||||| ||||||    
T  9118166 taataataatattaagagagtgaaaaacttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 9118247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 43022032 - 43022115
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttga----attttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| |||||||||||||||| ||||     ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  43022032 taatgataagattaagagagtgaaaaacttgatttttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 43022115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 926581 - 926500
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||| |||||| ||||||||| |||  |||||| | ||||||||||||||||| |||||| ||||||| |||||||    
T  926581 taataataagattaagatagtgaaaaacttggttttttttctgtgtccaaatcaaatgaaccaagtctctatttatagagag 926500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12858231 - 12858311
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| | |||| ||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||| |||||    
T  12858231 taataataagatgaagatagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 12858311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30819398 - 30819318
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| | |||| ||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||| |||||    
T  30819398 taataataagatgaagatagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 30819318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13151313 - 13151231
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||||||   ||||||   | ||||| |||||||||||||||||| ||||||| ||||||    
T  13151313 taataataagattaagagagtgaaaaatttagttttttttttctgtgtcgaaatcaaatgatccaagtctctatttatagaga 13151231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 39432477 - 39432411
Alignment:
Q  14 aagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||||||| |||  ||||||  |||||||||||||||||||||||| ||||||| ||||||    
T  39432477 aagatagtgaaaaacttggtttttttttgtgtccaaatcaaatgatccaagtctctatttatagaga 39432411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 9072666 - 9072621
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||    
T  9072666 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 9072621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 14151869 - 14151816
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagca 168  Q
    ||||||| |||||||||||||||  |||||||||||| |||||||||| |||||    
T  14151869 tatttgcaatgaaataattgagttcaaattattaagatgataaaaatctaagca 14151816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 36527464 - 36527513
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattgcacttggtctaaga 335  Q
    |||||||||||||||| ||||||||||||||||||| |  ||||||||||    
T  36527464 ttcaacatgttgaatggcaaattcaacatgccattgtaaatggtctaaga 36527513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 14151969 - 14151887
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttga---attttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| ||||    ||||||| |||| |||||||||||||||| ||  |||||| ||||||    
T  14151969 taataataagattaagagagtgaaaaacttgattttttttttctgtgttcaaatcaaatgatccacgtcactatttatagaga 14151887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 321
Target Start/End: Original strand, 14383622 - 14383657
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattg 321  Q
    |||||||||||||||| |||||||||||||||||||    
T  14383622 ttcaacatgttgaatggcaaattcaacatgccattg 14383657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31185018 - 31184936
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||| |||||| ||||||||| |||  ||||||  |  |||||||||||||||| |||||| ||||||| |||||||    
T  31185018 taataataagattaagatagtgaaaaacttggtttttttttctttgtccaaatcaaatgaaccaagtctctatttatagagag 31184936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 321
Target Start/End: Original strand, 44280756 - 44280791
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattg 321  Q
    |||||||||||||||| |||||||||||||||||||    
T  44280756 ttcaacatgttgaatggcaaattcaacatgccattg 44280791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 4296348 - 4296302
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  4296348 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 4296302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 5145065 - 5145027
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatt 72  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  5145065 ttttttctgtgtccaaatcaaatgatccaagtctctatt 5145027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 8855374 - 8855420
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  8855374 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 8855420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 36855101 - 36855055
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  36855101 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 36855055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 1987482 - 1987564
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt----cggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| | |||| ||||||||| |||| ||||||    | ||||||||||||||||| |||||| ||||||| |||||    
T  1987482 taataataagatgaagatagtgaaaaacttgattttttttttactgtgtccaaatcaaatgaaccaagtctctatttatagag 1987564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 43494962 - 43494918
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||    
T  43494962 ttttttctgtgtccaaatcaaatgaaccaagtctctatttataga 43494918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 109913 - 109754
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattttggtnnnnnnnntattatttgctatgaaataatt 133  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||||        ||||||||||||||         || |||||| |||||||||||    
T  109913 ttttttctgtgtccaaatcaaatgatccaagtctctatttatagagagaaaaaaa-tcacgaattttggtgaaaaaaaaatcatttgcaatgaaataatt 109815  T
Q  134 gagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcac 194  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  109814 gagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 109754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 45363819 - 45364019
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt----cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaa 96  Q
    |||||||||| ||||||||||||||| ||||  ||||||    | |||||||||||||||||||||||| ||||||||||||||         |||||||    
T  45363819 taataataagattaagagagtgaaaattttggtttttttttttctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaatatcacgaa 45363918  T
Q  97 ttttggtnnnnnnnntatta---tttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtca 193  Q
    |||||||         || |   |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  45363919 ttttggtaaaaataaaataaaaatttgctatgaaataattgagttcaaattattaagaagataaaaatccaagcagtcaatcgtaacaaaccacgtgtca 45364018  T
Q  194 c 194  Q
    |    
T  45364019 c 45364019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 33167556 - 33167739
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||||| ||||| ||||||| |||||          ||||||||||    
T  33167556 taataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgattcaagtctctatttatagaggaaaaaaaaatcacgaattt 33167655  T
Q  100 tggtnnnnnnnnta------ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgt 177  Q
    ||||         |      |||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  33167656 tggtaaaaaaataaaataaattatttgcaatgaaataattaagtctaaattattaagaagataaaaatccaaccagccaatcgt 33167739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37691024 - 37690945
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  37691024 taataataagattaagagagtgaaaaacttgatttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 37690945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37822944 - 37823023
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||||||||  ||||||  |||||||||||||||||||||||| ||||||||||||||    
T  37822944 taataataagattaagagagtgaaaaatttggtttttttttgtgtccaaatcaaatgatccaagtctctatttgtagaga 37823023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 47297204 - 47297142
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47297204 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 47297142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 48384783 - 48384721
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48384783 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 48384721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 51156414 - 51156234
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||| ||||| ||||||||||||||||| ||| |||||| | |||||||||||||||||||||||| ||||||| ||||||         | ||||||||    
T  51156414 taattataagattaagagagtgaaaaatatgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga--aaaaaaattacgaattt 51156317  T
Q  100 tggtnnnnnnnntattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaa 182  Q
    ||||         || |||||| |||||||||||||||| |||||||||||||||||||  | |||||| |||||||||||||    
T  51156316 tggtaaaaaaaaaatcatttgcaatgaaataattgagtccaaattattaagaagataaattttcaagcaaccaatcgtaacaa 51156234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 29524241 - 29524425
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttga-atttttt----cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacga 95  Q
    |||||||||| ||||||||||||||||||||  |||||||    | |||||||||||||||||||||||| ||||||||||||||         ||||||    
T  29524241 taataataagattaagagagtgaaaaatttgttatttttttcttctgtgtccaaatcaaatgatccaagtctctatttgtagaga--aaaaaaatcacga 29524338  T
Q  96 attttggtnnnnnnnntat-----tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgt 177  Q
    ||||||||         ||     ||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  29524339 attttggtaaaaataaaataaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaccagccaatcgt 29524425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17676073 - 17675994
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||||||||  ||||||  |||||||||||||||||||||||| ||||||| ||||||    
T  17676073 taataataagattaagagagtgaaaaatttggtttttttttgtgtccaaatcaaatgatccaagtctctatttatagaga 17675994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 30878362 - 30878287
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgta 76  Q
    |||||||||| |||||||||||||||| |||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  30878362 taataataagattaagagagtgaaaaacttggtttttttctgtgtccaaatcaaatgatccaagtctctatttgta 30878287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31159774 - 31159844
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctat 71  Q
    |||||||||| |||||||||||||||| |||| ||||||| |||||||||||||||||||||||| |||||    
T  31159774 taataataagattaagagagtgaaaaacttgatttttttctgtgtccaaatcaaatgatccaagtctctat 31159844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 45455515 - 45455453
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  45455515 attatttgcaatgaaataattgagtccaaattattaagaagaaaaaaatccaagcagccaatc 45455453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 251
Target Start/End: Complemental strand, 45623136 - 45622998
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||||    |   |||  |||| ||||||||||| | |||||    
T  45623136 attatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatcagcgcgcgccaagtgtctccgtgggccaggcattcaa 45623037  T
Q  213 catgttgaacctcttcaacacctctctcctccaactcac 251  Q
    |||||||||    |||||||| || ||||||||||||||    
T  45623036 catgttgaattgtttcaacacttccctcctccaactcac 45622998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29919710 - 29919791
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||| ||||||||||||||||||||| |||||| | |||| ||||||||||||||||||| ||||||| |||||||    
T  29919710 taataataagattaagagagtgaaaaatttgattttttttctgtgttcaaatcaaatgatccaagtctctatttatagagag 29919791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 43739372 - 43739551
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||| ||||| ||||||| ||||||         ||||||||||    
T  43739372 taataataagattaagagagtgaaaaacttgatttttttcctgtgtccaaatcaaatgattcaagtctctatttatagaga--aaaaaaatcacgaattt 43739469  T
Q  100 tggtnnnnnnnntat-----tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||        |||     ||||||| |||||||||||||||| ||| |||||||| ||||||||| ||||||||||||||    
T  43739470 tggtaaagtatatatatatatatttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaagcagccaatcg 43739551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 51494077 - 51493940
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaac 213  Q
    |||||||| |||||||||||| ||| |||||||||||||||||||||||| ||||| |||||   ||   |||  |||| ||||||||||| | ||||||    
T  51494077 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagtcaatcagcacgcgccaagtgtctccgtgggccaggcattcaac 51493978  T
Q  214 atgttgaacctcttcaacacctctctcctccaactcac 251  Q
    ||||||||    |||||||| || ||||||||||||||    
T  51493977 atgttgaattgtttcaacacttccctcctccaactcac 51493940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10265763 - 10265683
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||| ||||| |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  10265763 taataataagattaagagagtgaaaattttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 10265683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 30878230 - 30878174
Alignment:
Q  125 gaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaaca 181  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  30878230 gaaataattgagtccaaattattaagaagataaaaacccaagcagccaatcgtaaca 30878174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 45623260 - 45623180
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  45623260 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 45623180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 51494203 - 51494123
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  51494203 taataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 51494123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8471553 - 8471635
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||||||||| ||||||||||||||||||||  ||||||  | |||||||||||||||||||||||| ||||||| |||||||    
T  8471553 taataataagattaagagagtgaaaaatttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttatagagag 8471635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 10265582 - 10265519
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  10265582 attatttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcg 10265519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 31159891 - 31159950
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  31159891 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatc 31159950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 29919827 - 29919965
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaa 212  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||||||||| || ||||||||    |   |||  |||| ||||||||||| | |||||    
T  29919827 attatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagtagccaatcagcgcgcgccaagtgtctccgtgggccaggcattcaa 29919926  T
Q  213 catgttgaacctcttcaacacctctctcctccaactcac 251  Q
    |||||||||    |||||||| || ||||||||||||||    
T  29919927 catgttgaattgtttcaacacttccctcctccaactcac 29919965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 37823065 - 37823127
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  37823065 attatttgcaatgaaataattgagtccaaattattaagaagataaaaatctaagcagtcaatc 37823127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 251
Target Start/End: Complemental strand, 37690901 - 37690765
Alignment:
Q  115 tatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtcaccgtgggccagactttcaaca 214  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||||||| ||||| |||||    |   |||  |||| ||||||||||| | |||||||    
T  37690901 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagtcaatcagcgcgcgccaagtgtctccgtgggccaggcattcaaca 37690802  T
Q  215 tgttgaacctcttcaacacctctctcctccaactcac 251  Q
    |||||||    |||||||| || ||||||||||||||    
T  37690801 tgttgaattgtttcaacacttccctcctccaactcac 37690765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 36231381 - 36231444
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||||||||||||  ||| |||||||| ||||||||||||||||||||||||    
T  36231381 attatttgcaatgaaataattgagttcaaaatattaagatgataaaaatccaagcagccaatcg 36231444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 2474729 - 2474675
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagc 167  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||    
T  2474729 attatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaagc 2474675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 14097155 - 14097216
Alignment:
Q  114 ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||||| |||||||||||| ||| |||||||||||||||||||||||| |||| ||||||    
T  14097155 ttatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcaaccaatc 14097216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20584550 - 20584473
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    |||||||||| |||||| |||||||||||||  ||||||| ||||| ||||||||||| |||||| ||||||| ||||    
T  20584550 taataataagattaagatagtgaaaaatttggtttttttctgtgtcaaaatcaaatgaaccaagtctctatttataga 20584473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 47296950 - 47296897
Alignment:
Q  278 tacaatgattcaacatgttgaatgacaaattcaacatgccattgcacttggtct 331  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||||||||    
T  47296950 tacaatgattcaacatgttgaatgacactttcaacaagccattgcacttggtct 47296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 17675913 - 17675865
Alignment:
Q  127 aataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  17675913 aataattgagtccaaattattaagaagataaaaattcaagcagccaatc 17675865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19578643 - 19578561
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg---aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| |||     ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  19578643 taataataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 19578561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 48384908 - 48384828
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||| ||||| |||||||||||||||| |||| |||||| | | |||||||||||||||||||||| ||||||| ||||||    
T  48384908 taatgataagattaagagagtgaaaaacttgattttttttctgcgtccaaatcaaatgatccaagtctctatttatagaga 48384828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 51523607 - 51523786
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcg--gtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaatt 98  Q
    |||||| ||| |||||||||||||||| |||  ||||||    ||||| |||||||||||||||||| ||||||| ||||| |        |||||||||    
T  51523607 taataaaaagattaagagagtgaaaaacttggtttttttttttgtgtctaaatcaaatgatccaagtctctatttatagagggaaaaaaaatcacgaatt 51523706  T
Q  99 ttggtnnnnnnnntattatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaaca 181  Q
    |||||         | ||||||| |||||| ||||||||  ||| |||||||| |||||||||| ||||||||||||||||||    
T  51523707 ttggtaaaaaa---aatatttgcaatgaaaaaattgagtacaaaatattaagatgataaaaatcgaagcagccaatcgtaaca 51523786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2474854 - 2474773
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg--aattttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| ||||||||||||||| | ||    ||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  2474854 taataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatttatagaga 2474773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 19578526 - 19578477
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatc 162  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  19578526 attatttgcaatgaaataattgggtccaaattattaagaagataaaaatc 19578477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 45242392 - 45242472
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt--cggtgtccaaatcaaatgatccaagtttctatttgtagag 79  Q
    |||||||||| | |||| ||||||||| |||| ||||||  | |||||||||||||||||||||||| ||||||| |||||    
T  45242392 taataataagatgaagatagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttatagag 45242472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14097028 - 14097110
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttga---attttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| ||||    ||||||| ||||||||||||||| ||| |||| ||||||| ||||||    
T  14097028 taataataagattaagagagtgaaaaacttgattttttttttctgtgtccaaatcaaataatcaaagtctctatttatagaga 14097110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 47297321 - 47297242
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttg--aattttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    |||||||||| ||||||||||||||||||||    ||||||| |||||||||| ||||||| ||||| ||||||| ||||    
T  47297321 taataataagattaagagagtgaaaaatttggtttttttttctgtgtccaaatgaaatgattcaagtctctatttataga 47297242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 48407711 - 48407793
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttga---attttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||||||||||||| ||||    ||||||| |||| ||||||||||||| ||||| ||||||| ||||||    
T  48407711 taataataagattaagagagtgaaaaacttgattttttttttctgtgttcaaatcaaatgattcaagtctctatttatagaga 48407793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 8471673 - 8471736
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcg 176  Q
    ||||||||| |||||||||||||||| ||| |||||||| ||||||||| ||| ||| ||||||    
T  8471673 attatttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaaacagtcaatcg 8471736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 29920005 - 29920047
Alignment:
Q  279 acaatgattcaacatgttgaatgacaaattcaacatgccattg 321  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  29920005 acaatggttcaacatgttgaatggcaaattcaacatgccattg 29920047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3754785 - 3754708
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaattttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    |||||| ||| |||||| |||||||| |||| |||||||  ||||||||||||||||| |||| | ||||||| ||||    
T  3754785 taataacaagattaagatagtgaaaattttggattttttttgtgtccaaatcaaatgaaccaattctctatttataga 3754708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 17675649 - 17675596
Alignment:
Q  278 tacaatgattcaacatgttgaatgacaaattcaacatgccattgcacttggtct 331  Q
    |||||||||||||||||||||||| ||  || |||| |||||||||||||||||    
T  17675649 tacaatgattcaacatgttgaatggcacttttaacaagccattgcacttggtct 17675596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 17675954 - 17675913
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaaga 154  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  17675954 attatttgcaatgaaataattgagtccaaattattaagaaga 17675913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8464906 - 8464988
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||| ||||||||| |||  ||||||   | ||||||||||||||||| |||||| ||||||| ||||||    
T  8464906 taataataagattaagatagtgaaaaacttggttttttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 8464988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 36231299 - 36231338
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctattt 73  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  36231299 ttttttctgtgtccaaatcaaatgatccaagtctctattt 36231338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 321
Target Start/End: Complemental strand, 37690718 - 37690683
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattg 321  Q
    |||||||||||||||| |||||||||||||||||||    
T  37690718 ttcaacatgttgaatggcaaattcaacatgccattg 37690683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 321
Target Start/End: Complemental strand, 51493893 - 51493858
Alignment:
Q  286 ttcaacatgttgaatgacaaattcaacatgccattg 321  Q
    |||||||||||||||| |||||||||||||||||||    
T  51493893 ttcaacatgttgaatggcaaattcaacatgccattg 51493858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 643539 - 643501
Alignment:
Q  42 gtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  643539 gtgtccaaatcaaatgatccaagtctctatttatagaga 643501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 27630037 - 27629991
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  27630037 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 27629991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 31471563 - 31471609
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  31471563 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 31471609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 37419921 - 37419875
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  37419921 ttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 37419875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17786585 - 17786667
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| | |||| ||||||||| |||| ||||||   | |||| |||||||||||| |||||| ||||||| ||||||    
T  17786585 taataataagatgaagatagtgaaaaacttgattttttttttctgtgtacaaatcaaatgaaccaagtctctatttatagaga 17786667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 1164 - 963
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||  ||||||||||||||||||||| |||||| | |||||||||||||||||||||||| ||||||||||||||         ||||||||||    
T  1164 taataataaaattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtctctatttgtagagaaaaaaaaaatcacgaattt 1065  T
Q  100 tggtnnnnnnnntatta-------tttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaacaaaccacatgtc 192  Q
    ||||         | ||       ||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||| ||||    
T  1064 tggtaaaaaataaaataaaattaatttgcaatgaaataattgagtcaaaattattaagaagataaaaattcaagcagccaatcgtaacaagccacgtgtc 965  T
Q  193 ac 194  Q
    ||    
T  964 ac 963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 196 - 334
Target Start/End: Original strand, 578 - 713
Alignment:
Q  196 gtgggccagactttcaacatgttgaacctcttcaacacctctctcctccaactcacnnnnnnnccaattcaacannnnnnnttacaatgattcaacatgt 295  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||||||||||||        ||| |||||||        ||||||| ||||||||||    
T  578 gtgggccaggctttcaacatgttgaacttgttcaacacctctctcctccaactcagttttttcccatttcaacaccccc---tacaatggttcaacatgt 674  T
Q  296 tgaatgacaaattcaacatgccattgcacttggtctaag 334  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  675 tgaatggcaaattcaacatgccattgcacttggtctaag 713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 270 - 446
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagagnnnnnnnntcacgaattt 99  Q
    |||||||||| |||||||||||||||| |||| |||||| |  ||||||||||||||||||||||| ||||||| ||||||         | ||||||||    
T  270 taataataagattaagagagtgaaaaacttgattttttttctttgtccaaatcaaatgatccaagtctctatttatagagaaaaaacaaattacgaattt 369  T
Q  100 tggtnnnnnnnnta-ttatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    ||||         | |||||||| |||||||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  370 tggtaaaaaaaaaaattatttgcaatgaaataattgagtccaaataattaagaagataaaaattcaagcagccaatc 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1183 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold1183
Description:

Target: scaffold1183; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 110 - 176
Alignment:
Q  113 attatttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatcgtaa 179  Q
    ||||||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  110 attatttgcaatgaaataattgagtcaaaattattaagatgataaaaatccaagaagccaatcgtaa 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1183; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 20 - 64
Alignment:
Q  34 ttttttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||    
T  20 ttttttctgtgtccaaatcaaatgaaccaagtatctatttataga 64  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 83522 - 83463
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  83522 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 83463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 106298 - 106357
Alignment:
Q  116 atttgctatgaaataattgagtctaaattattaagaagataaaaatccaagcagccaatc 175  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  106298 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 106357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 106175 - 106256
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt-cggtgtccaaatcaaatgatccaagtttctatttgtagagag 81  Q
    |||| ||||| ||||||||||||||||| ||| |||||| | |||| ||||||||||||||||||| ||||||| |||||||    
T  106175 taattataagattaagagagtgaaaaatatgattttttttctgtgtgcaaatcaaatgatccaagtctctatttatagagag 106256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6451 - 6369
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttttt---cggtgtccaaatcaaatgatccaagtttctatttgtagaga 80  Q
    |||||||||| |||||| ||||||||| |||| ||||||   | ||||||||||||||||| |||||| ||||||| ||||||    
T  6451 taataataagattaagatagtgaaaaacttgattttttttttctgtgtccaaatcaaatgaaccaagtctctatttatagaga 6369  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 124380 - 124458
Alignment:
Q  1 taataataaggttaagagagtgaaaaatttgaatttt-ttcggtgtccaaatcaaatgatccaagtttctatttgtaga 78  Q
    |||||||||| |||||| ||| ||||| ||| ||||| ||||||||||||||||||| | |||||| ||||||| ||||    
T  124380 taataataagattaagatagtaaaaaacttggatttttttcggtgtccaaatcaaataaaccaagtctctatttataga 124458  T

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