View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14773_high_2 (Length: 433)
Name: NF14773_high_2
Description: NF14773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14773_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 429
Target Start/End: Original strand, 4939388 - 4939813
Alignment:
| Q |
1 |
tttataatgatcatcattaacattggtgttttttccacaatctgcattttcctgaagtaaaaaagcaaactcaagttgcacctccacttcacccattgtt |
100 |
Q |
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| T |
4939388 |
tttataatgatcatcatcaacattggtgtttttgctacaatctgcattttcctgaagtaaa--------ctcaagttgcacctccacttcacccattgtt |
4939479 |
T |
|
| Q |
101 |
----ggtcgttcatttggatcatatt---gtaaacatctttttgtcacatctacaaatacttcccaacattttggtgcaatgcttcctttgagatactca |
193 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
4939480 |
aattggtcgttcatttggatcatattattgtaaacatctttttgtcacatctacaaatacttcccaacaatttggtgcaatgcttcctttgagatactca |
4939579 |
T |
|
| Q |
194 |
tcaatattctcctccattgggagtctctgtctcttaacattttctaacttctccaagcataccacttctagtagaattttaccaaaggagtaaacgtcac |
293 |
Q |
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||||||||||| || ||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
4939580 |
tcaatattctcttctattgggaacctttgtctc--aacattttctaacttttccaagcataccacttctagtagaatattaccaaaggagtaaacgtcac |
4939677 |
T |
|
| Q |
294 |
acttatctgttactttattgttttctaaaatctctggggccacgtaaccatatgaacctatatatgagagcaagtatcaattatttaagtcaatatacaa |
393 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4939678 |
acttatctgttactttattgttttctaaaatctctggggccacgtaaccatatgaacctatatatgagagcaagtatcaattatttaagtcaatatacaa |
4939777 |
T |
|
| Q |
394 |
cttagccctcaccccataattatggacaccactcaa |
429 |
Q |
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||||||||||||| |||||||||||||||||||||| |
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| T |
4939778 |
cttagccctcacctcataattatggacaccactcaa |
4939813 |
T |
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