View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14775_high_7 (Length: 235)

Name: NF14775_high_7
Description: NF14775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14775_high_7
NF14775_high_7
[»] chr1 (54 HSPs)
chr1 (1-164)||(15932783-15932946)
chr1 (1-161)||(34270697-34270857)
chr1 (1-163)||(33010710-33010872)
chr1 (1-163)||(42948187-42948349)
chr1 (1-162)||(13942142-13942303)
chr1 (1-162)||(50727796-50727957)
chr1 (1-162)||(52024724-52024885)
chr1 (1-162)||(52044313-52044474)
chr1 (1-161)||(2482556-2482716)
chr1 (1-161)||(39569379-39569539)
chr1 (1-162)||(24317180-24317340)
chr1 (1-161)||(44721871-44722031)
chr1 (1-164)||(28852843-28853006)
chr1 (1-162)||(49823203-49823364)
chr1 (1-161)||(6653224-6653384)
chr1 (1-161)||(18909215-18909375)
chr1 (1-163)||(26151089-26151251)
chr1 (1-163)||(51677172-51677334)
chr1 (1-161)||(2138169-2138329)
chr1 (1-161)||(40400033-40400193)
chr1 (1-156)||(20581504-20581658)
chr1 (65-162)||(13240207-13240304)
chr1 (89-163)||(14247457-14247531)
chr1 (89-162)||(51290548-51290621)
chr1 (89-161)||(11173512-11173584)
chr1 (89-161)||(39982263-39982335)
chr1 (89-162)||(40536800-40536873)
chr1 (44-163)||(40498615-40498734)
chr1 (35-162)||(51776028-51776155)
chr1 (35-161)||(29922183-29922309)
chr1 (44-165)||(51001999-51002120)
chr1 (44-160)||(17474665-17474781)
chr1 (35-163)||(26307844-26307972)
chr1 (44-158)||(41712763-41712877)
chr1 (44-161)||(12601854-12601970)
chr1 (44-157)||(23444312-23444424)
chr1 (44-163)||(9640859-9640978)
chr1 (44-163)||(32086480-32086599)
chr1 (35-164)||(17605724-17605853)
chr1 (51-137)||(5672915-5673001)
chr1 (35-164)||(7009005-7009131)
chr1 (52-138)||(35273849-35273935)
chr1 (37-165)||(19514097-19514225)
chr1 (44-138)||(8114872-8114966)
chr1 (44-138)||(19247745-19247839)
chr1 (44-161)||(6016581-6016698)
chr1 (44-161)||(13146022-13146138)
chr1 (41-138)||(35841475-35841572)
chr1 (35-138)||(14290252-14290355)
chr1 (44-163)||(48933213-48933331)
chr1 (43-163)||(3485813-3485933)
chr1 (35-162)||(24527597-24527721)
chr1 (35-163)||(32561262-32561389)
chr1 (162-214)||(4402157-4402209)
[»] chr4 (56 HSPs)
chr4 (1-163)||(55215531-55215693)
chr4 (1-162)||(56362817-56362978)
chr4 (1-164)||(39540339-39540502)
chr4 (1-162)||(55219866-55220027)
chr4 (1-161)||(42724119-42724279)
chr4 (1-165)||(52913131-52913295)
chr4 (1-163)||(42348658-42348820)
chr4 (1-161)||(28406376-28406536)
chr4 (1-161)||(37234143-37234303)
chr4 (1-163)||(23895132-23895295)
chr4 (1-163)||(19874060-19874222)
chr4 (1-163)||(53875048-53875210)
chr4 (1-161)||(20434162-20434322)
chr4 (1-161)||(55183465-55183625)
chr4 (1-162)||(38291793-38291954)
chr4 (1-163)||(53035956-53036115)
chr4 (3-162)||(43830157-43830316)
chr4 (1-162)||(25857540-25857700)
chr4 (1-161)||(613823-613983)
chr4 (1-162)||(52839670-52839831)
chr4 (1-161)||(10541970-10542130)
chr4 (1-161)||(52307395-52307555)
chr4 (89-162)||(20737689-20737762)
chr4 (89-162)||(56018719-56018792)
chr4 (35-161)||(47467379-47467505)
chr4 (89-162)||(31709714-31709787)
chr4 (44-161)||(43621555-43621672)
chr4 (35-162)||(43458363-43458490)
chr4 (35-166)||(11682203-11682334)
chr4 (35-166)||(11690482-11690613)
chr4 (36-163)||(24896983-24897109)
chr4 (44-163)||(41202326-41202445)
chr4 (35-165)||(1522779-1522909)
chr4 (44-162)||(22847103-22847221)
chr4 (44-161)||(24034518-24034635)
chr4 (77-161)||(28803982-28804066)
chr4 (44-160)||(30217104-30217220)
chr4 (50-161)||(35339631-35339742)
chr4 (35-161)||(3026381-3026507)
chr4 (49-163)||(37828751-37828863)
chr4 (77-165)||(48990341-48990429)
chr4 (50-138)||(51322672-51322760)
chr4 (35-161)||(22301719-22301842)
chr4 (35-138)||(40430145-40430248)
chr4 (44-138)||(49306-49400)
chr4 (35-160)||(34159011-34159136)
chr4 (35-161)||(13962450-13962575)
chr4 (77-161)||(51322403-51322487)
chr4 (63-122)||(8713263-8713321)
chr4 (180-214)||(26660238-26660272)
chr4 (49-131)||(32932614-32932696)
chr4 (90-164)||(47429856-47429930)
chr4 (44-162)||(48349465-48349583)
chr4 (35-131)||(32135386-32135479)
chr4 (35-108)||(36851458-36851531)
chr4 (50-162)||(50561563-50561674)
[»] chr7 (50 HSPs)
chr7 (1-166)||(26015786-26015951)
chr7 (1-161)||(32542103-32542263)
chr7 (1-161)||(46321966-46322126)
chr7 (1-163)||(21278989-21279151)
chr7 (1-163)||(38875974-38876136)
chr7 (1-163)||(43246877-43247039)
chr7 (1-162)||(46923877-46924038)
chr7 (1-161)||(47065860-47066020)
chr7 (1-163)||(34591674-34591836)
chr7 (1-161)||(7900433-7900593)
chr7 (1-161)||(8203361-8203521)
chr7 (1-161)||(8215838-8215998)
chr7 (1-162)||(40995186-40995347)
chr7 (1-162)||(27324954-27325115)
chr7 (1-161)||(38283511-38283671)
chr7 (1-161)||(40705433-40705592)
chr7 (1-161)||(25876776-25876936)
chr7 (1-161)||(47779429-47779589)
chr7 (20-163)||(32662307-32662450)
chr7 (1-161)||(7790903-7791064)
chr7 (1-161)||(40994733-40994893)
chr7 (77-162)||(35924229-35924314)
chr7 (89-161)||(42095782-42095854)
chr7 (89-163)||(39074364-39074438)
chr7 (89-162)||(43047094-43047167)
chr7 (44-163)||(43775881-43776000)
chr7 (89-163)||(21874639-21874713)
chr7 (44-163)||(24980853-24980972)
chr7 (162-224)||(34850563-34850625)
chr7 (35-164)||(30173420-30173549)
chr7 (49-138)||(39597841-39597930)
chr7 (44-165)||(40862355-40862476)
chr7 (35-164)||(45870127-45870256)
chr7 (35-162)||(36688694-36688820)
chr7 (42-108)||(19021023-19021089)
chr7 (35-164)||(20492681-20492809)
chr7 (44-162)||(10594083-10594201)
chr7 (35-163)||(12428597-12428725)
chr7 (49-161)||(12847146-12847258)
chr7 (35-138)||(42436462-42436565)
chr7 (124-161)||(19687096-19687133)
chr7 (77-161)||(44709896-44709980)
chr7 (35-162)||(29042143-29042269)
chr7 (44-119)||(46101846-46101921)
chr7 (35-161)||(40305431-40305557)
chr7 (35-119)||(47540332-47540417)
chr7 (35-119)||(47546889-47546974)
chr7 (50-158)||(241685-241792)
chr7 (35-138)||(7883634-7883737)
chr7 (63-119)||(19473980-19474034)
[»] chr2 (40 HSPs)
chr2 (1-163)||(15011817-15011979)
chr2 (1-162)||(21657926-21658087)
chr2 (1-161)||(1481811-1481971)
chr2 (1-161)||(25853357-25853517)
chr2 (1-161)||(44143360-44143520)
chr2 (1-164)||(45505710-45505873)
chr2 (1-163)||(42342966-42343128)
chr2 (1-158)||(2390611-2390768)
chr2 (1-161)||(1520176-1520336)
chr2 (1-161)||(13196062-13196222)
chr2 (1-161)||(40811697-40811857)
chr2 (1-163)||(34202277-34202439)
chr2 (1-163)||(37094086-37094248)
chr2 (1-161)||(39697702-39697862)
chr2 (1-162)||(3178225-3178386)
chr2 (1-149)||(43577015-43577163)
chr2 (1-164)||(10638775-10638937)
chr2 (61-164)||(927061-927164)
chr2 (1-92)||(874953-875044)
chr2 (90-162)||(32551681-32551753)
chr2 (90-161)||(35895492-35895563)
chr2 (35-161)||(38629368-38629494)
chr2 (35-162)||(4331840-4331967)
chr2 (89-161)||(27980924-27980994)
chr2 (89-161)||(28067454-28067524)
chr2 (35-163)||(13480508-13480636)
chr2 (44-163)||(458577-458696)
chr2 (44-131)||(44456780-44456867)
chr2 (44-162)||(26170975-26171093)
chr2 (44-164)||(7722641-7722761)
chr2 (62-119)||(5109181-5109238)
chr2 (36-161)||(44798809-44798933)
chr2 (36-161)||(45443516-45443640)
chr2 (52-119)||(31569635-31569702)
chr2 (1-35)||(927170-927204)
chr2 (162-214)||(16202063-16202115)
chr2 (39-108)||(31640769-31640838)
chr2 (75-119)||(4073497-4073541)
chr2 (44-131)||(8034942-8035030)
chr2 (45-125)||(10554733-10554812)
[»] chr3 (52 HSPs)
chr3 (1-162)||(20835519-20835680)
chr3 (1-161)||(10841369-10841529)
chr3 (1-161)||(37971611-37971771)
chr3 (1-164)||(22781844-22782007)
chr3 (1-163)||(38871118-38871280)
chr3 (1-162)||(4044745-4044906)
chr3 (1-162)||(25710885-25711046)
chr3 (1-162)||(40586108-40586269)
chr3 (1-161)||(53974310-53974470)
chr3 (1-160)||(41069837-41069995)
chr3 (1-163)||(33712560-33712721)
chr3 (1-163)||(4515951-4516113)
chr3 (1-161)||(36430267-36430427)
chr3 (1-161)||(10999683-10999843)
chr3 (1-161)||(20048334-20048494)
chr3 (6-163)||(7156613-7156770)
chr3 (42-163)||(33966893-33967014)
chr3 (1-128)||(6268295-6268422)
chr3 (89-162)||(32236131-32236204)
chr3 (89-161)||(84388-84460)
chr3 (89-164)||(20657412-20657487)
chr3 (89-163)||(26090199-26090273)
chr3 (89-161)||(7679722-7679794)
chr3 (89-160)||(24395096-24395167)
chr3 (35-162)||(44354469-44354596)
chr3 (44-165)||(2613306-2613427)
chr3 (35-163)||(36885711-36885839)
chr3 (44-138)||(49779834-49779928)
chr3 (89-162)||(672066-672139)
chr3 (44-161)||(35039572-35039689)
chr3 (42-161)||(7680981-7681100)
chr3 (35-118)||(47098274-47098357)
chr3 (35-164)||(38145211-38145340)
chr3 (35-162)||(30418689-30418816)
chr3 (35-162)||(36232642-36232769)
chr3 (35-119)||(39627093-39627176)
chr3 (50-138)||(51662148-51662236)
chr3 (43-162)||(33392510-33392628)
chr3 (41-132)||(54556376-54556467)
chr3 (35-161)||(11095647-11095773)
chr3 (35-161)||(11123858-11123984)
chr3 (49-162)||(4596411-4596523)
chr3 (124-164)||(22786331-22786371)
chr3 (52-138)||(48584857-48584943)
chr3 (44-161)||(36841085-36841202)
chr3 (35-119)||(52343124-52343208)
chr3 (51-162)||(52812127-52812237)
chr3 (36-118)||(8947833-8947914)
chr3 (44-138)||(35233645-35233738)
chr3 (35-138)||(14279129-14279232)
chr3 (44-162)||(19941681-19941799)
chr3 (1-35)||(33967007-33967041)
[»] chr8 (48 HSPs)
chr8 (1-164)||(17122087-17122250)
chr8 (1-159)||(39365248-39365406)
chr8 (1-161)||(23357180-23357340)
chr8 (1-164)||(26122449-26122612)
chr8 (1-163)||(3032821-3032983)
chr8 (1-162)||(26290702-26290863)
chr8 (1-162)||(26303959-26304120)
chr8 (1-162)||(26337314-26337475)
chr8 (1-165)||(22439529-22439693)
chr8 (3-162)||(35605336-35605495)
chr8 (4-162)||(34564955-34565113)
chr8 (1-158)||(8376243-8376400)
chr8 (1-162)||(8656553-8656714)
chr8 (1-161)||(24822647-24822807)
chr8 (1-161)||(42512159-42512319)
chr8 (1-160)||(34917539-34917698)
chr8 (1-161)||(43664249-43664408)
chr8 (1-165)||(3137148-3137312)
chr8 (1-161)||(5988188-5988348)
chr8 (89-163)||(5599872-5599946)
chr8 (89-163)||(5640674-5640748)
chr8 (89-163)||(28885723-28885797)
chr8 (89-162)||(28909661-28909734)
chr8 (89-161)||(15839455-15839527)
chr8 (89-164)||(11587895-11587970)
chr8 (79-162)||(12713578-12713661)
chr8 (89-161)||(8013936-8014008)
chr8 (89-161)||(37577983-37578055)
chr8 (35-163)||(41942319-41942447)
chr8 (89-162)||(17601333-17601406)
chr8 (49-161)||(31793821-31793933)
chr8 (44-162)||(36057699-36057817)
chr8 (44-160)||(4229637-4229753)
chr8 (35-158)||(12722559-12722682)
chr8 (44-161)||(42687908-42688025)
chr8 (35-162)||(4005764-4005891)
chr8 (44-131)||(38168452-38168539)
chr8 (77-138)||(38945711-38945772)
chr8 (36-160)||(5347437-5347560)
chr8 (35-119)||(7969992-7970075)
chr8 (35-138)||(11266156-11266259)
chr8 (51-162)||(38234416-38234527)
chr8 (35-162)||(38460060-38460186)
chr8 (77-163)||(35329727-35329812)
chr8 (50-119)||(5552-5621)
chr8 (94-161)||(28620416-28620483)
chr8 (63-138)||(39712700-39712774)
chr8 (41-131)||(16571214-16571303)
[»] scaffold0391 (1 HSPs)
scaffold0391 (1-163)||(3873-4035)
[»] scaffold0368 (1 HSPs)
scaffold0368 (1-163)||(13860-14022)
[»] chr5 (41 HSPs)
chr5 (1-161)||(4156094-4156254)
chr5 (1-161)||(9065698-9065858)
chr5 (1-162)||(31527503-31527664)
chr5 (1-161)||(13145806-13145966)
chr5 (1-161)||(43293583-43293743)
chr5 (1-164)||(19034646-19034809)
chr5 (1-162)||(33280808-33280969)
chr5 (1-164)||(24559065-24559228)
chr5 (1-164)||(24600097-24600260)
chr5 (1-163)||(37865873-37866035)
chr5 (1-162)||(43518217-43518378)
chr5 (89-162)||(25084855-25084928)
chr5 (89-162)||(25142828-25142901)
chr5 (90-161)||(38760537-38760608)
chr5 (89-162)||(6469947-6470020)
chr5 (43-165)||(12189273-12189395)
chr5 (89-163)||(19617736-19617810)
chr5 (35-162)||(8232542-8232669)
chr5 (35-162)||(40738891-40739018)
chr5 (41-163)||(36294179-36294301)
chr5 (35-164)||(18864427-18864556)
chr5 (50-163)||(37340798-37340911)
chr5 (89-161)||(29920290-29920362)
chr5 (35-163)||(10666096-10666224)
chr5 (49-161)||(41881893-41882005)
chr5 (52-163)||(4621145-4621255)
chr5 (44-161)||(42437343-42437460)
chr5 (49-161)||(31484649-31484761)
chr5 (77-161)||(43548584-43548668)
chr5 (40-138)||(37105873-37105970)
chr5 (35-160)||(15272728-15272853)
chr5 (54-163)||(18522160-18522268)
chr5 (35-138)||(7338643-7338745)
chr5 (35-138)||(37274574-37274677)
chr5 (44-158)||(18978453-18978567)
chr5 (35-160)||(6245188-6245313)
chr5 (77-160)||(10552506-10552589)
chr5 (62-113)||(35319759-35319810)
chr5 (35-138)||(13210948-13211051)
chr5 (35-161)||(31498837-31498963)
chr5 (162-214)||(22859629-22859681)
[»] chr6 (23 HSPs)
chr6 (1-164)||(13889882-13890045)
chr6 (1-163)||(6625356-6625518)
chr6 (1-161)||(6167860-6168020)
chr6 (1-161)||(7141263-7141423)
chr6 (1-161)||(25335062-25335222)
chr6 (1-165)||(29122278-29122444)
chr6 (1-162)||(29630420-29630581)
chr6 (1-161)||(18893675-18893835)
chr6 (1-162)||(3094587-3094748)
chr6 (35-131)||(7081002-7081098)
chr6 (35-163)||(6925775-6925903)
chr6 (35-131)||(8811261-8811357)
chr6 (49-162)||(23350353-23350466)
chr6 (36-160)||(32173670-32173794)
chr6 (44-137)||(34085811-34085904)
chr6 (35-163)||(18024377-18024505)
chr6 (82-163)||(31091150-31091231)
chr6 (77-161)||(8525525-8525609)
chr6 (50-162)||(11369053-11369165)
chr6 (35-120)||(5714918-5715003)
chr6 (76-138)||(13445401-13445463)
chr6 (77-138)||(29623172-29623233)
chr6 (178-214)||(17225171-17225207)
[»] scaffold0438 (1 HSPs)
scaffold0438 (1-162)||(2039-2200)
[»] scaffold0276 (2 HSPs)
scaffold0276 (1-161)||(12520-12680)
scaffold0276 (1-163)||(13973-14135)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-161)||(157039-157199)
scaffold0007 (50-138)||(200056-200144)
[»] scaffold0248 (1 HSPs)
scaffold0248 (1-162)||(2948-3109)
[»] scaffold0065 (1 HSPs)
scaffold0065 (89-161)||(38424-38496)
[»] scaffold0896 (1 HSPs)
scaffold0896 (35-131)||(3708-3804)
[»] scaffold0578 (1 HSPs)
scaffold0578 (37-165)||(8714-8842)
[»] scaffold0003 (1 HSPs)
scaffold0003 (35-131)||(365809-365905)


Alignment Details
Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 15932946 - 15932783
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15932946 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 15932847  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15932846 aggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcttt 15932783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 34270697 - 34270857
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34270697 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 34270796  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34270797 aggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 34270857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 33010710 - 33010872
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33010710 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 33010809  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33010810 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 33010872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 42948349 - 42948187
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42948349 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 42948250  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  42948249 agggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactctt 42948187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 13942303 - 13942142
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13942303 aacacaatcgatcgattggagaattatggttttggaagaagagttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 13942204  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  13942203 aggataatcttgtcattttggggtgcaaccatgattaaatagggtgcaagtagaaaaactct 13942142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 50727957 - 50727796
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  50727957 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaacaaaaaaaaaaggaataggctttttgaaaatcaaattttatgaa 50727858  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50727857 aggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 50727796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 52024885 - 52024724
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52024885 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 52024786  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52024785 agggtaatcctgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 52024724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 52044313 - 52044474
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52044313 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 52044412  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52044413 agggtaatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 52044474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 2482556 - 2482716
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2482556 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 2482655  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2482656 agggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 2482716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 39569379 - 39569539
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39569379 aacacgatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 39569478  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39569479 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 39569539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 24317340 - 24317180
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24317340 aacacaatcgatcgattggagaattatggttt-ggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 24317242  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24317241 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 24317180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 44722031 - 44721871
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44722031 aacacaatcgatcgattagagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 44721932  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44721931 agggtaatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 44721871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 28852843 - 28853006
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28852843 aacacaatcgatcgattggagaattatagttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 28852942  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||| ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  28852943 agggtaatcttgtcattttagggtgcaaccatgattaactaggatgcaagtagaaaaactcttt 28853006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 49823364 - 49823203
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  49823364 aacacaatcgatcgattggagaattatggtttcggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttataaa 49823265  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  49823264 agggtaatcttgtcattttggggtgcaaccatgattaattagggtgcaagtagaaaaactct 49823203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 6653384 - 6653224
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  6653384 aacacaatcgatcgattggagaattatgattttggaagaagagttttggggtgtaaccaaaaaagaaggaataggctttttgaaagtcaaattttatgaa 6653285  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6653284 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 6653224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 18909375 - 18909215
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  18909375 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaagaataggctttttgaaaatcaaattttatgaa 18909276  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  18909275 agggtaatattgtcattttggaatgcaaccatgattaactagggtgtaagtagaaaaactc 18909215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26151089 - 26151251
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  26151089 aacacaatcgatcgattggagaattatggttttgaaagaagagttttagggtgtaaccaaaaaagaaggaatatgctttttgaaaatcaaattttatgaa 26151188  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26151189 aggataatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 26151251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 51677172 - 51677334
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  51677172 aacacaatcgatcggttggagaattatggttttggaagaagagttttggggtgtaaccaaaaaagaaggaataggctttttgtaaatcaaattttatgaa 51677271  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||    
T  51677272 aggataatcttgtcattttagaatgcaactatgattaactagggtgcaagtagaaaaactctt 51677334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 2138169 - 2138329
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2138169 aacacaatcgatcaattggagaattatagttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 2138268  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| ||||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  2138269 agggtaatcttatcattttgaggtgcaaccatgattaactagagtgcaagtagaaaaactc 2138329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 40400193 - 40400033
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  40400193 aacacaatcgatcgattggagaattatggttttggaagaggggttttgggatgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaa 40400094  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40400093 agggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 40400033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 20581658 - 20581504
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20581658 aacacaatcgatcgattggagaattatggttttggaagaggggttttggg-tgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 20581560  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaa 156  Q
    ||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  20581559 agggtaattttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaa 20581504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 13240207 - 13240304
Alignment:
Q  65 gaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||  | ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13240207 gaaggaatagactctttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 13240304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 14247457 - 14247531
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14247457 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 14247531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 51290621 - 51290548
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  51290621 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 51290548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 11173512 - 11173584
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11173512 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 11173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 39982335 - 39982263
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39982335 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 39982263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 40536800 - 40536873
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  40536800 aaattttatgaaagggtaatcttgtcattttgaggtgcaaccatgattaactagggtgcaagtagaaaaactct 40536873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 40498734 - 40498615
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||  |||||  |||    
T  40498734 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaagggtaattttgtcattttggggtgcaaccagaattaaacagg 40498635  T
Q  144 gtgcaagtagaaaaactctt 163  Q
    ||| || |||||||||||||    
T  40498634 gtgtaattagaaaaactctt 40498615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 51776155 - 51776028
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||| ||||| |||||||||| |||| |||| |||||||||||||||||||||| ||    
T  51776155 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttaaaaattaaattttatggaagggtaattttgtcattttgggatgcaaccagga 51776056  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  |||||| || ||||||||||||    
T  51776055 ttaaacagggtgtaattagaaaaactct 51776028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 29922183 - 29922309
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| ||  ||||||||||| ||||||||||||||| |||| |||||||||| || |||||||| ||    
T  29922183 gaagagggattttagggtgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccagga 29922282  T
Q  135 ttaactagggtgcaagtagaaaaactc 161  Q
    ||||  |||||| || |||||||||||    
T  29922283 ttaaacagggtgtaattagaaaaactc 29922309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 165
Target Start/End: Original strand, 51001999 - 51002120
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||||||||||||| |||||||||| || ||||| || ||||||  |||    
T  51001999 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaaggataattttgtcattttagggtgcaatcaggattaaacagg 51002098  T
Q  144 gtgcaagtagaaaaactcttta 165  Q
    ||  || |||||||||||||||    
T  51002099 gtataattagaaaaactcttta 51002120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 17474781 - 17474665
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| |   ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||  |||    
T  17474781 ttttagggtgtaaccaagaaaaaaggaagattctttttgaaaattaaattttatgaaaggataattttgtcattttaggatgcaaccaggattaaagagg 17474682  T
Q  144 gtgcaagtagaaaaact 160  Q
     || || ||||||||||    
T  17474681 atgtaattagaaaaact 17474665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 26307972 - 26307844
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| ||||||||| ||||||||||  | |||||||| ||    
T  26307972 gaagatggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggataattttgtcattttaaggtgcaaccaaga 26307873  T
Q  135 ttaactagggtgcaagtagaaaaactctt 163  Q
    ||||  |||||| || |||||||||||||    
T  26307872 ttaaacagggtgtaattagaaaaactctt 26307844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 158
Target Start/End: Complemental strand, 41712877 - 41712763
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| |||||||||  |||||||||||| |||||||| ||||||  |||    
T  41712877 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacagg 41712778  T
Q  144 gtgcaagtagaaaaa 158  Q
    ||| || ||||||||    
T  41712777 gtgtaattagaaaaa 41712763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 161
Target Start/End: Complemental strand, 12601970 - 12601854
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||||||| |||||| | | ||||||||||| |||||||||| ||| ||||| |||||||||| |||||||||||  |||||  |||    
T  12601970 ttttagggtgtaaccaaaaaaaaaggaagatgctttttgaaaattaaattttatggaagaataattttgtcatttt-ggatgcaaccagaattaaacagg 12601872  T
Q  144 gtgcaagtagaaaaactc 161  Q
    ||| || |||||||||||    
T  12601871 gtgtaattagaaaaactc 12601854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 23444312 - 23444424
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | |||| |||||| |||||||||||||||||||| |||||||| |||| |||||||| |||||| ||||    
T  23444312 ttttagggtgtaaccaagaaaaaaggaagatgctttt-gaaaattaaattttatgaaaggataattttgtcattgtggggtgcaaccaagattaaatagg 23444410  T
Q  144 gtgcaagtagaaaa 157  Q
    ||| || |||||||    
T  23444411 gtgtaattagaaaa 23444424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 163
Target Start/End: Original strand, 9640859 - 9640978
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| || ||| | | ||||||||||| ||||||||| ||||| |||| |||||||||| ||||||||||| |||| |  |||    
T  9640859 ttttagggtgtaaccaagaaaaaaagaagatgctttttgaaaattaaattttataaaagggtaattttgtcattttaggatgcaaccaggattgaaaagg 9640958  T
Q  144 gtgcaagtagaaaaactctt 163  Q
    ||| || |||||||||||||    
T  9640959 gtgtaattagaaaaactctt 9640978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 32086599 - 32086480
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | |  |||||||||| |||||||||| |||||||||  |||||||||||| ||||| || ||||||  |||    
T  32086599 ttttagggtgtaaccaagaaaaaaggaagatgccttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaatcaggattaaacagg 32086500  T
Q  144 gtgcaagtagaaaaactctt 163  Q
    ||| || |||||||||||||    
T  32086499 gtgtaattagaaaaactctt 32086480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 164
Target Start/End: Complemental strand, 17605853 - 17605724
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| || | |||| |||||||||| || |||||||| ||    
T  17605853 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaaggtaattttgtcattttagggtgcaaccagga 17605754  T
Q  135 ttaactagggtgcaagtagaaaaactcttt 164  Q
    |||   |||||| || ||||||||||||||    
T  17605753 ttacacagggtgtaattagaaaaactcttt 17605724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 5673001 - 5672915
Alignment:
Q  51 gtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgatta 137  Q
    |||||||||| ||| |||||| | | ||||||||||| |||||||||| |||| |||| |||||||||| ||||||||||| |||||    
T  5673001 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttaggatgcaaccaggatta 5672915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 164
Target Start/End: Complemental strand, 7009131 - 7009005
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| ||||||||||||||| | ||||  ||||||| ||| ||||| ||||| ||||||||||||||| |||| |||| |||||||| || ||||| ||    
T  7009131 gaagaggggttttggggtgtaccgaaaa--gaaggaagaggcttttt-aaaattaaattttatgaaagggtaattttgttattttggggtgtaaccagga 7009035  T
Q  135 ttaactagggtgcaagtagaaaaactcttt 164  Q
    ||||  ||||||  | ||||||||||||||    
T  7009034 ttaaacagggtgtgattagaaaaactcttt 7009005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 35273935 - 35273849
Alignment:
Q  52 tgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    ||||||||| ||| |||||| | | ||||||||||| |||||||||| |||||||||  ||||||||| ||||||||||| ||||||    
T  35273935 tgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggataattctgtcattttaggatgcaaccaggattaa 35273849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 165
Target Start/End: Original strand, 19514097 - 19514225
Alignment:
Q  37 agaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgatt 136  Q
    |||||| ||||  ||||||||||| ||| |||||| | | ||||||||||| |||||||||| |||  |||| |||| |||||  |||||||||| ||||    
T  19514097 agaaggattttaaggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagagtaattttgttattttaagatgcaaccaggatt 19514196  T
Q  137 aactagggtgcaagtagaaaaactcttta 165  Q
    ||  |||||| || |||||||||| ||||    
T  19514197 aaacagggtgtaattagaaaaacttttta 19514225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 8114872 - 8114966
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    |||| |||||||||||| ||| || ||| | | ||||||||||| ||||||| || ||||||||| |||||||||| || |||||||| ||||||    
T  8114872 ttttagggtgtaaccaagaaaaaaagaagatgctttttgaaaattaaattttctggaaggataattttgtcattttagggtgcaaccaggattaa 8114966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 19247745 - 19247839
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    |||| |||||||| ||| ||| |||||| | | ||||||||||| |||||||||| |||| |||| || ||||||| ||||||||||| ||||||    
T  19247745 ttttagggtgtaatcaagaaaaaaggaagatgctttttgaaaataaaattttatggaagggtaattttatcattttaggatgcaaccaggattaa 19247839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 6016581 - 6016698
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| || ||| | ||||||| ||||| |||||||||  || |||||| ||||||||||   ||||||||| ||||||  |||    
T  6016581 ttttagggtgtaaccaagaaaaaaagaagatgttttttaaaaattaaattttatagaatgataattttgtcattttaaaatgcaaccaggattaaacagg 6016680  T
Q  144 gtgcaagtagaaaaactc 161  Q
    ||| || |||||||||||    
T  6016681 gtgtaattagaaaaactc 6016698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 161
Target Start/End: Complemental strand, 13146138 - 13146022
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| || ||||||| |||  |||| |||||||||| || |||||||| ||||||  |||    
T  13146138 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaa-ttttatggaagagtaattttgtcattttagggtgcaaccaggattaaacagg 13146040  T
Q  144 gtgcaagtagaaaaactc 161  Q
    ||| || |||||||||||    
T  13146039 gtgtaattagaaaaactc 13146022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 35841572 - 35841475
Alignment:
Q  41 gggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    |||||||||| |||||| ||  |||||| || ||  ||||||||||| |||||||||| ||||||||| |||| |||||| |||| ||| ||||||||    
T  35841572 gggttttgggttgtaacaaagtaagaagaaagagactttttgaaaattaaattttatggaaggataattttgttattttgagatgtaactatgattaa 35841475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 14290252 - 14290355
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| ||| || | | ||||||||||| |||||||||| |||| |||| ||||||||||  | |||||||| ||    
T  14290252 gaagagggattttagggtgtaaccaagaaaaaagaaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttaaggtgcaaccagga 14290351  T
Q  135 ttaa 138  Q
    ||||    
T  14290352 ttaa 14290355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 48933331 - 48933213
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||| ||||||| ||| ||| || | |||||| |||||| || ||||||| |||| |||| || |||||||| | |||||||||||||||  |||    
T  48933331 ttttagggtataaccaagaaaaaagaaagatgtttttcgaaaattaa-ttttatggaagggtaattttatcattttgaggtgcaaccatgattaatcagg 48933233  T
Q  144 gtgcaagtagaaaaactctt 163  Q
    ||| || |||||||||||||    
T  48933232 gtgtaattagaaaaactctt 48933213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 3485933 - 3485813
Alignment:
Q  43 gttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaa-ttttatgaaaggataatcttgtcattttgggatgcaaccatgattaacta 141  Q
    |||||||||||||||| | ||| |||||| ||| ||||||||||| ||| |||||| |||||||||| |||| ||||||   || ||||| ||||||  |    
T  3485933 gttttggggtgtaaccgagaaa-aaggaagaggctttttgaaaattaaatttttataaaaggataattttgttattttgaagtgtaaccaagattaaaca 3485835  T
Q  142 gggtgcaagtagaaaaactctt 163  Q
    ||||| || || ||||||||||    
T  3485834 gggtgtaattaaaaaaactctt 3485813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 24527597 - 24527721
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| ||||||||||||||||| | ||  ||||||| | | ||||| ||||| ||||||||||||| | |||| ||| |||||||| |||||| || ||    
T  24527597 gaagaggggttttggggtgtaacgagaa--gaaggaagatgcttttt-aaaattaaattttatgaaatggtaattttggcattttggaatgcaatcagga 24527693  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  ||||||  | ||||||||||||    
T  24527694 ttaaacagggtgtgattagaaaaactct 24527721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 32561389 - 32561262
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| ||||||||| |||||| |||||| | |||||| |||||| || ||||||  |||| |||| ||||||||||  | |||||||| ||    
T  32561389 gaagagggattttagggtgtaacaaaaaaaaaaggaagatgtttttcgaaaattaa-ttttatagaagggtaattttgtcatttttaggtgcaaccagga 32561291  T
Q  135 ttaactagggtgcaagtagaaaaactctt 163  Q
    ||||  | |||| || |||||||||||||    
T  32561290 ttaatcatggtgtaattagaaaaactctt 32561262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 4402209 - 4402157
Alignment:
Q  162 tttagagaactctaatgcatattacatcatatttcaattataatttataataa 214  Q
    ||||||||||| || |  |||||| |||||||||||||| |||||||||||||    
T  4402209 tttagagaactttactatatattatatcatatttcaattctaatttataataa 4402157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 55215531 - 55215693
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55215531 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 55215630  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  55215631 aggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 55215693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 56362978 - 56362817
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56362978 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 56362879  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  56362878 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 56362817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 39540339 - 39540502
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39540339 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 39540438  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39540439 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcttt 39540502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 55220027 - 55219866
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55220027 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 55219928  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  55219927 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 55219866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 42724119 - 42724279
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42724119 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 42724218  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42724219 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 42724279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 52913131 - 52913295
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52913131 aacacaatcgatcggttggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 52913230  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttta 165  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  52913231 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcttta 52913295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 42348820 - 42348658
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42348820 aacacaatcgatcgattggagaattatggttttggaataagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 42348721  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  42348720 aggataatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactctt 42348658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 28406376 - 28406536
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  28406376 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatagactttttgaaaatcaaattttatgaa 28406475  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  28406476 aggataatcttgtcattttggggtgcaaccatgattaactagggtgcaaggagaaaaactc 28406536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 37234143 - 37234303
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37234143 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 37234242  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  37234243 aggataatcttgtcattttggggtgcaaccataattaactaaggtgcaagtagaaaaactc 37234303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 23895132 - 23895295
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaa-aagaaggaataggttttttgaaaatcaaattttatga 99  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  23895132 aacacaatcgatcggttggagaattatggttttggaagaatggttttggggtgtaaccaaaaaaagaaggaataggctttttgaaaatcaaattttatga 23895231  T
Q  100 aaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23895232 aaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 23895295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 19874060 - 19874222
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19874060 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 19874159  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| ||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  19874160 agggtaatcttgtcattttagggtgcaaccatgattaagtagggtgcaagtagaaaaactctt 19874222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 53875048 - 53875210
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  53875048 aacacaatcgatcggttggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatgggctttttgaaaatcaaattttatgaa 53875147  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  53875148 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 53875210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 20434322 - 20434162
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20434322 aacacaatcgatcgattggagaattatggttttggaagaagagttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 20434223  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  20434222 agggtaatcttgtcattttggggtgcaaccatgattaagtagggtgcaagtagaaaaactc 20434162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 55183465 - 55183625
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55183465 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 55183564  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||  ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  55183565 agagtaatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 55183625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 38291793 - 38291954
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38291793 aacacaatcgatcgattggagaattatggttttggaagaagggttttagggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 38291892  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  38291893 aggttaatcttgtcattttttggtgcaaccatgattaactagggtgcaagtagaaaaactct 38291954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 53035956 - 53036115
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  53035956 aacacaatcgatcgattggataattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttt---gaaaatcaaattttatgaa 53036052  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  53036053 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 53036115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 43830157 - 43830316
Alignment:
Q  3 cacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaag 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43830157 cacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaaag 43830256  T
Q  103 gataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    | |||| ||||||||||| | ||||||||||||||||||||||||||| |||||||||||    
T  43830257 ggtaatattgtcattttgaggtgcaaccatgattaactagggtgcaaggagaaaaactct 43830316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25857700 - 25857540
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25857700 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 25857601  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    | | |||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||    
T  25857600 aaggtaatcttgtcattttggggtgcaaccatgatt-attagggtgcaagtagaaaaactct 25857540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 613983 - 613823
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  613983 aacacaattgatcgattgcagaattatggttttggaagaagggttttggggtgtaaccaaaagagaaggaataggctttttgaaaatcaaattttatgaa 613884  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  613883 agggtaatcttgtcattttggggtgcaaccatgattaactggggtgcaagtagaaaaactc 613823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 52839670 - 52839831
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  52839670 aacacaatcgatcgattggagaatcatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataagctttttgaaaatcaaattttatgaa 52839769  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  52839770 agggtaattttgtcgttttggggtgcaaccatgattaactaggatgcaagtagaaaaactct 52839831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 10541970 - 10542130
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| | ||||||||||||||||||||||||    
T  10541970 aacacaatcgatcgattggagaattatggttttggaagaggggttttggggtgtaaccaagaaagaaagaatatgctttttgaaaatcaaattttatgaa 10542069  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10542070 agggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 10542130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 52307395 - 52307555
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  52307395 aacacaatcgatcgattggagaattatggttttggaagaggaattttggggtgtaaccaagaaagaaggaataggctttttgaaaattaaattttatgaa 52307494  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  52307495 aggataatcttatcattttaggatgcaaccatgattaactagggtgtaagtagaaaaactc 52307555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 20737762 - 20737689
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20737762 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 20737689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 56018719 - 56018792
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  56018719 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaggatgcaagtagaaaaactct 56018792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 47467379 - 47467505
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||| ||||  |||||||||| |||| |||| |||||||||||||||||||||||||    
T  47467379 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttaaaaactaaattttatggaagggtaattttgtcattttgggatgcaaccatga 47467478  T
Q  135 ttaactagggtgcaagtagaaaaactc 161  Q
    ||||  |||||| || |||||||||||    
T  47467479 ttaaacagggtgtaattagaaaaactc 47467505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 31709787 - 31709714
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||| |||||||||||||||||||||  | ||||||||||||||| |||||||||||||||||||||||    
T  31709787 aaattttataaaaggataatcttgtcattttaaggtgcaaccatgattaattagggtgcaagtagaaaaactct 31709714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 43621555 - 43621672
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| ||||||||| |||||||||| |||||||||| |||||||| || ||||||  |||    
T  43621555 ttttagggtgtaaccaagaaaaaaggaagatgatttttgaaaattaaattttataaaaggataattttgtcattttaggatgcaatcaggattaaaaagg 43621654  T
Q  144 gtgcaagtagaaaaactc 161  Q
    ||| || |||||||||||    
T  43621655 gtgtaattagaaaaactc 43621672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 43458363 - 43458490
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| |   ||||||||||| |||||||||| |||| |||| ||||||||||||| |||||||||||    
T  43458363 gaagagggattttagggtgtaaccaagaaaaaaggaagatactttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccatga 43458462  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  |||||| || || |||||||||    
T  43458463 ttaaacagggtgtaattataaaaactct 43458490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 166
Target Start/End: Complemental strand, 11682334 - 11682203
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||||||||||||| || ||||||| || |||||||| ||    
T  11682334 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaaggataattttatcattttagggtgcaaccagga 11682235  T
Q  135 ttaactagggtgcaagtagaaaaactctttag 166  Q
    || |  ||  || || ||||||||||||||||    
T  11682234 ttgaacagaatgtaattagaaaaactctttag 11682203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 166
Target Start/End: Complemental strand, 11690613 - 11690482
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||||||||||||| || ||||||| || |||||||| ||    
T  11690613 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaaggataattttatcattttagggtgcaaccagga 11690514  T
Q  135 ttaactagggtgcaagtagaaaaactctttag 166  Q
    || |  ||  || || ||||||||||||||||    
T  11690513 ttgaacagaatgtaattagaaaaactctttag 11690482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 163
Target Start/End: Complemental strand, 24897109 - 24896983
Alignment:
Q  36 aagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgat 135  Q
    |||| |||||||||||||||||| | ||| |||||| ||| ||||||||| | ||||||||||||||  |||| ||||||||||||| || ||||| |||    
T  24897109 aagaggggttttggggtgtaaccgacaaa-aaggaagaggctttttgaaacttaaattttatgaaagagtaattttgtcattttggggtgtaaccaggat 24897011  T
Q  136 taactagggtgcaagtagaaaaactctt 163  Q
    |||  | |||| || |||||||||||||    
T  24897010 taaacaaggtgtaattagaaaaactctt 24896983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 163
Target Start/End: Original strand, 41202326 - 41202445
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | |  |||||||||| |||||||||| |||||||||  |||||||||||| |||||||| ||||||  | |    
T  41202326 ttttagggtgtaaccaagaaaaaaggaagatgcattttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacatg 41202425  T
Q  144 gtgcaagtagaaaaactctt 163  Q
    ||| || |||||||||||||    
T  41202426 gtgtaattagaaaaactctt 41202445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 165
Target Start/End: Complemental strand, 1522909 - 1522779
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| ||| || | | ||||||||||| |||||||||| |||  |||| |||||||||| ||||||||||| ||    
T  1522909 gaagagggattttagggtgtaaccaagaaaaaagaaagatgctttttgaaaattaaattttatggaagagtaattttgtcattttaggatgcaaccagga 1522810  T
Q  135 ttaactagggtgcaagtagaaaaactcttta 165  Q
    ||||  |||||  || |||||||||||||||    
T  1522809 ttaaacagggtataattagaaaaactcttta 1522779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 22847221 - 22847103
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| ||||||||  |||||| | |||| | | ||||||||||| ||||||||||||| ||||||  |||||||||||| |||||||| ||||||  |||    
T  22847221 ttttagggtgtaataaaaaaaaacggaagatgctttttgaaaattaaattttatgaaaagataattctgtcattttggggtgcaaccaggattaaacagg 22847122  T
Q  144 gtgcaagtagaaaaactct 162  Q
    ||| || ||||||||||||    
T  22847121 gtgtaattagaaaaactct 22847103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 161
Target Start/End: Complemental strand, 24034635 - 24034518
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| |||| |||| ||||||||||||| | ||||||  |||||  |||    
T  24034635 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttggggtacaaccagaattaaacagg 24034536  T
Q  144 gtgcaagtagaaaaactc 161  Q
    ||| || |||||||||||    
T  24034535 gtgtaattagaaaaactc 24034518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 28803982 - 28804066
Alignment:
Q  77 tttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||| |||||||||| |||| |||| |||||||||| || | |||||||||||||  ||||||||| |||||||||||    
T  28803982 tttttgaaaattaaattttatggaagggtaattttgtcattttagggtacaaccatgattaaacagggtgcaattagaaaaactc 28804066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 30217104 - 30217220
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| ||||||||| ||||||||||   ||||||||| |||||| ||||    
T  30217104 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggataattttgtcatttttaaatgcaaccaggattaaatagg 30217203  T
Q  144 gtgcaagtagaaaaact 160  Q
      | || ||||||||||    
T  30217204 acgtaattagaaaaact 30217220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 161
Target Start/End: Original strand, 35339631 - 35339742
Alignment:
Q  50 ggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaa 149  Q
    ||||||||||| ||| || ||| | | ||||||||||| |||||||||| |||| ||||||||||||||| || |||||||| ||||||  | |||| ||    
T  35339631 ggtgtaaccaagaaaaaatgaagatgctttttgaaaattaaattttatggaagggtaatcttgtcattttagggtgcaaccaggattaaacatggtgtaa 35339730  T
Q  150 gtagaaaaactc 161  Q
     |||||||||||    
T  35339731 ttagaaaaactc 35339742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 3026507 - 3026381
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| |||| |||| |||||||||| |||||||| || ||    
T  3026507 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttaggatgcaatcagga 3026408  T
Q  135 ttaactagggtgcaagtagaaaaactc 161  Q
    || |  |||||  || |||||||||||    
T  3026407 tttaacagggtttaattagaaaaactc 3026381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 37828863 - 37828751
Alignment:
Q  49 gggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgca 148  Q
    |||||||||||||||| |||||| | ||||||||||||| ||||||||||| ||| |||| |||| ||||||  ||||||||| ||||||  | |||| |    
T  37828863 gggtgtaaccaaaaaa-aaggaagatgttttttgaaaattaaattttatgagagggtaattttgttattttgatatgcaaccaagattaaaga-ggtgta 37828766  T
Q  149 agtagaaaaactctt 163  Q
    | |||||||||||||    
T  37828765 attagaaaaactctt 37828751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 48990429 - 48990341
Alignment:
Q  77 tttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttta 165  Q
    ||||||||||| |||||||||| |||| |||| || ||||||| || |||||| | |||||| ||||||| || |||||||||||||||    
T  48990429 tttttgaaaattaaattttatggaagggtaattttatcattttagggtgcaacgaggattaaatagggtgtaattagaaaaactcttta 48990341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 51322760 - 51322672
Alignment:
Q  50 ggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    ||||||||||| ||| ||| || | | ||||||||||| |||||||||||||||||||| || |||||||| | |||||||| ||||||    
T  51322760 ggtgtaaccaagaaaaaagaaaaatgctttttgaaaattaaattttatgaaaggataattttatcattttgaggtgcaaccaagattaa 51322672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 22301719 - 22301842
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| |||||||||||||||  |  | ||||||||| ||| ||||| ||||| ||||||||||||||| |||| |||| |||||||| |||||||| ||    
T  22301719 gaagaggggttttggggtgta--ccgagaagaaggaagaggcttttt-aaaattaaattttatgaaagggtaattttgttattttggggtgcaaccagga 22301815  T
Q  135 ttaactagggtgcaagtagaaaaactc 161  Q
    ||||  ||||||  | |||||||||||    
T  22301816 ttaaacagggtgtgattagaaaaactc 22301842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 40430248 - 40430145
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| || ||| | | ||||||||||| |||||||||| |||| |||| |||||||||| || |||||||| ||    
T  40430248 gaagagggattttagggtgtaaccaagaaaaaaagaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttagggtgcaaccagga 40430149  T
Q  135 ttaa 138  Q
    ||||    
T  40430148 ttaa 40430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 49306 - 49400
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    |||| |||||||||||| ||| |||||| | | ||||| ||||| ||||||||||||||| |||| |||||||||| |  |||||||| ||||||    
T  49306 ttttagggtgtaaccaagaaaaaaggaagatgctttttaaaaattaaattttatgaaagggtaattttgtcattttagagtgcaaccaagattaa 49400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 34159136 - 34159011
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| || ||| | | ||||||||||| |||||||||  ||||||||| ||||||||||  ||||||||||  |    
T  34159136 gaagagggattttagggtgtaaccaagaaaaaatgaagatgctttttgaaaattaaattttatagaaggataattttgtcattttaagatgcaaccagaa 34159037  T
Q  135 ttaactagggtgcaagtagaaaaact 160  Q
    ||||  | |||| || ||||||||||    
T  34159036 ttaaacaaggtgtaattagaaaaact 34159011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 13962450 - 13962575
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||  | | ||||||||||| || ||||||| || | |||| ||||||||||||| |||||| | ||    
T  13962450 gaagagggattttagggtgtaaccaagaaaaaaggatgatgctttttgaaaattaa-ttttatggaaaggtaattttgtcattttggggtgcaactagga 13962548  T
Q  135 ttaactagggtgcaagtagaaaaactc 161  Q
    ||||  |||||| || |||||||||||    
T  13962549 ttaaacagggtgtaattagaaaaactc 13962575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 51322403 - 51322487
Alignment:
Q  77 tttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||| |||||||||| |||| |||| || || ||||||||||||||||  |||||  || ||| || |||||||||||    
T  51322403 tttttgaaaattaaattttatggaagggtaattttatccttttgggatgcaaccagaattaaacagagtgtaattagaaaaactc 51322487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 8713321 - 8713263
Alignment:
Q  63 aagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttggg 122  Q
    ||||||||| ||| ||||| ||||| ||||||||||||||| |||| |||||||||||||    
T  8713321 aagaaggaagaggcttttt-aaaattaaattttatgaaagggtaattttgtcattttggg 8713263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 26660238 - 26660272
Alignment:
Q  180 atattacatcatatttcaattataatttataataa 214  Q
    |||||| ||||||||||||||||||||||||||||    
T  26660238 atattatatcatatttcaattataatttataataa 26660272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 32932696 - 32932614
Alignment:
Q  49 gggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaacca 131  Q
    |||||||||||| ||| || ||| | | ||||| ||||| |||||||||||||   |||| ||||||||||| ||||||||||    
T  32932696 gggtgtaaccaagaaaaaaagaagatgcttttttaaaattaaattttatgaaaatgtaattttgtcattttgagatgcaacca 32932614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 47429856 - 47429930
Alignment:
Q  90 aattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    |||||||||||||  |||| || ||||||| ||||||||||| |||||| |||  || || ||||||||||||||    
T  47429856 aattttatgaaagagtaattttatcattttaggatgcaaccaggattaaatagaatgtaattagaaaaactcttt 47429930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 48349465 - 48349583
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| ||  ||||||||||| ||||||||| ||| | |||| || ||||||| |  | |||||| ||||||  | |    
T  48349465 ttttagggtgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttataaaaaggtaattttatcattttagagtacaaccaggattaaacaag 48349564  T
Q  144 gtgcaagtagaaaaactct 162  Q
    ||| || ||||||||||||    
T  48349565 gtgtaattagaaaaactct 48349583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 32135479 - 32135386
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaacca 131  Q
    ||||| |||||||||||||||  |  | ||||||||| ||| ||||| ||||| ||||||||||||| | |||| |||||||||| ||||| |||||    
T  32135479 gaagaggggttttggggtgta--ccgagaagaaggaagaggcttttt-aaaattaaattttatgaaaaggtaattttgtcattttaggatgtaacca 32135386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 36851531 - 36851458
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataat 108  Q
    ||||| || |||| ||||||||| || ||| |||||| ||  ||||||||||| ||||||||||||||| ||||    
T  36851531 gaagagggattttagggtgtaactaagaaaaaaggaagagtctttttgaaaattaaattttatgaaagggtaat 36851458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 50561674 - 50561563
Alignment:
Q  50 ggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaa 149  Q
    ||||||||||| ||| ||| || | | ||||||||||| || ||||||| |||| |||| |||||||||| |  |||||||| ||||||  || ||| ||    
T  50561674 ggtgtaaccaagaaaaaagaaagatgctttttgaaaattaa-ttttatggaagggtaattttgtcattttagagtgcaaccaggattaaacagagtgtaa 50561576  T
Q  150 gtagaaaaactct 162  Q
     ||||||||||||    
T  50561575 ttagaaaaactct 50561563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 8e-82; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 26015786 - 26015951
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26015786 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 26015885  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctttag 166  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26015886 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctttag 26015951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 32542103 - 32542263
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32542103 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 32542202  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32542203 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 32542263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 46321966 - 46322126
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46321966 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 46322065  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  46322066 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 46322126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 21278989 - 21279151
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  21278989 aacacaatcgatcgattggagaattatggttttggaagaggggttttggggtgtaaccaaaaaagaaggaatatgctttttgaaaatcaaattttatgaa 21279088  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21279089 aggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 21279151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38875974 - 38876136
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38875974 aacacaattgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 38876073  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38876074 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 38876136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 43246877 - 43247039
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43246877 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 43246976  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  43246977 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaactagaaaaactctt 43247039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 46924038 - 46923877
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46924038 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 46923939  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  46923938 agggtaatcttgtcattttggggtgcaaccatgattaactatggtgcaagtagaaaaactct 46923877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 47065860 - 47066020
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47065860 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 47065959  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  47065960 agggtaatcttgtcattttggggtgcaaccatgattaagtagggtgcaagtagaaaaactc 47066020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 34591836 - 34591674
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  34591836 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaacaaaaaaaaaaggaataggctttttgaaaatcaaattttatgaa 34591737  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  34591736 aggataatcttgtcattttgaggtgcaaccatgattaactagggtgcaagtagaaaaactctt 34591674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 7900593 - 7900433
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7900593 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 7900494  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  7900493 agggtaatcttgtcattttggggtgcaaccatgattaactaggatgcaagtaaaaaaactc 7900433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 8203361 - 8203521
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8203361 aacacaatcgatcgattggagaattatggttttggaaaaggggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 8203460  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  8203461 agggtaatcttgtcattttggagtgcaaccatgattaactaaggtgcaagtagaaaaactc 8203521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 8215838 - 8215998
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8215838 aacacaatcgatcgattggagaattatggttttggaaaaggggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 8215937  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  8215938 agggtaatcttgtcattttggagtgcaaccatgattaactaaggtgcaagtagaaaaactc 8215998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 40995347 - 40995186
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  40995347 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatatgctttttgataatcaaattttatgaa 40995248  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| ||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  40995247 agggtaatcttatcattttggggtgcaaccatgattaantagggtgcaagtagaaaaactct 40995186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 27325115 - 27324954
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27325115 aacacaatcgatcgattggagaattatggttttgaaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 27325016  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||| |||||||||  ||||||||| |||||||||| ||||||||||||||||||    
T  27325015 aggataatcttatcattttggagtgcaaccataattaactaggatgcaagtagaaaaactct 27324954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 38283511 - 38283671
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  38283511 aacacaatcgatcgattggagaattatggttttggaagaagggttttgggatgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaa 38283610  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38283611 agggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 38283671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 40705433 - 40705592
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  40705433 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaat-gaaggaataggctttttgaaaatcaaattttatgaa 40705531  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40705532 agggcaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 40705592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 25876936 - 25876776
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| ||    
T  25876936 aacacaatcgatcgattggagaattatgattttggaagaggggttttggggtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttataaa 25876837  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25876836 agggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 25876776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 47779429 - 47779589
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  47779429 aacacaatcgatcgattgtagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaa 47779528  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  47779529 agggtaatcttgtcattttggggtgcaaccatgattaactaggatgcaagtagaaaaactc 47779589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 32662307 - 32662450
Alignment:
Q  20 agaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcatttt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||||||||    
T  32662307 agaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatagactttttgaaaatcaaattttatgaaaaggtaatcttgtcatttt 32662406  T
Q  120 gggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| ||||||||||||||||||||||||||||||||||||||||    
T  32662407 ggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 32662450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 7791064 - 7790903
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaa-gaaggaataggttttttgaaaatcaaattttatga 99  Q
    ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||| |||||| |||||||||||  ||||||||||||||||||||||    
T  7791064 aacacaatcgatcgattggagaattatggttttggaagaggatttttggggtgtaacaaaaaaaagaaggaataggcattttgaaaatcaaattttatga 7790965  T
Q  100 aaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7790964 aagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 7790903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 40994733 - 40994893
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||| ||    
T  40994733 aacacaatcgatcgattggagaattatggttttggaagaagggttttgggatgtaaccaaaaaagaaggaatagactttttgaaaatcaaattttataaa 40994832  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||||||||| || |||||  | ||||||||||||||||||| ||  ||||||||||||||    
T  40994833 aggataatctcgttattttatggtgcaaccatgattaactagagtttaagtagaaaaactc 40994893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 35924314 - 35924229
Alignment:
Q  77 tttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35924314 tttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 35924229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 42095782 - 42095854
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42095782 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 42095854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 39074364 - 39074438
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  39074364 aaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactctt 39074438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 43047094 - 43047167
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  43047094 aaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactct 43047167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 43776000 - 43775881
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||||||||||||| || |||||||||| |||||||| |||||| ||||    
T  43776000 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaaggataattttatcattttggggtgcaaccaggattaaatagg 43775901  T
Q  144 gtgcaagtagaaaaactctt 163  Q
     || || |||||||||||||    
T  43775900 atgtaattagaaaaactctt 43775881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 21874639 - 21874713
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||    
T  21874639 aaattttatgaaagaataatcttgtcattttagggtgcaaccatgattaactaggatgcaagtagaaaaactctt 21874713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 24980972 - 24980853
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| ||||||||| |||||||||| || |||||||| ||||||  |||    
T  24980972 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggataattttgtcattttagggtgcaaccaggattaaacagg 24980873  T
Q  144 gtgcaagtagaaaaactctt 163  Q
    ||| || |||||||||||||    
T  24980872 gtgtaattagaaaaactctt 24980853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 34850625 - 34850563
Alignment:
Q  162 tttagagaactctaatgcatattacatcatatttcaattataatttataataacacttatatt 224  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  34850625 tttagagaactctaatgcatattacatcatattttaattataatttataataatacttatatt 34850563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 164
Target Start/End: Original strand, 30173420 - 30173549
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttat-gaaaggataatcttgtcattttgggatgcaaccatg 133  Q
    ||||| || |||| ||||||||| |||||| |||||| | ||||||||||||| ||||||||| |||||| |||| |||||||||||  ||||||||| |    
T  30173420 gaagagggattttagggtgtaacaaaaaaaaaaggaagatgttttttgaaaattaaattttatagaaagg-taattttgtcattttgaaatgcaaccaag 30173518  T
Q  134 attaactagggtgcaagtagaaaaactcttt 164  Q
    ||||| ||||||  || ||||||||||||||    
T  30173519 attaaatagggtataattagaaaaactcttt 30173549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 39597841 - 39597930
Alignment:
Q  49 gggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    |||||||||||| ||| |||||| | | ||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||| ||||||    
T  39597841 gggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgacaggataattttgtcattttggggtgcaaccaggattaa 39597930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 165
Target Start/End: Complemental strand, 40862476 - 40862355
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||||||||||||| |||||||||| || ||||| || ||||||  |||    
T  40862476 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaaggataattttgtcattttagggtgcaatcaggattaaacagg 40862377  T
Q  144 gtgcaagtagaaaaactcttta 165  Q
     |  || |||||||||||||||    
T  40862376 atataattagaaaaactcttta 40862355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 164
Target Start/End: Original strand, 45870127 - 45870256
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| ||||||||| ||||||||||| | ||||||||  |    
T  45870127 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggataattttgtcattttgaggtgcaaccagaa 45870226  T
Q  135 ttaactagggtgcaagtagaaaaactcttt 164  Q
    ||||  | |||| || ||||||||||||||    
T  45870227 ttaaacatggtgtaattagaaaaactcttt 45870256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 36688694 - 36688820
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| || ||||||| ||||||||| ||||||||||| |||||||| | ||    
T  36688694 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaa-ttttatggaaggataattttgtcattttgagatgcaacaagga 36688792  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  |||||| || ||||||||||||    
T  36688793 ttaaagagggtgtaattagaaaaactct 36688820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 19021023 - 19021089
Alignment:
Q  42 ggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataat 108  Q
    ||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||||||| ||||    
T  19021023 ggttttggggtgtaaccaaaaaataaggaagagactttttgaaaatcaaattttatgaaagggtaat 19021089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 164
Target Start/End: Complemental strand, 20492809 - 20492681
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | |||| |||||| |||||||||| |||| |||| ||||||||||||| |||||||| ||    
T  20492809 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttt-gaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccagga 20492711  T
Q  135 ttaactagggtgcaagtagaaaaactcttt 164  Q
    ||||  |||||| || || |||||||||||    
T  20492710 ttaatcagggtgtaattataaaaactcttt 20492681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 10594201 - 10594083
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||| ||||| |||||||||| |||| ||||  ||| |||||||| |||||||| ||||||  |||    
T  10594201 ttttagggtgtaaccaagaaaaaaggaagatgctttttaaaaattaaattttatggaaggttaattctgttattttggggtgcaaccaggattaaacagg 10594102  T
Q  144 gtgcaagtagaaaaactct 162  Q
    ||| || ||||||||||||    
T  10594101 gtgtaattagaaaaactct 10594083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 12428725 - 12428597
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | ||||||| ||||| |||||| ||| ||||||||| ||||||||||   ||||||||| ||    
T  12428725 gaagagggattttagggtgtaaccaagaaaaaaggaagatgttttttaaaaattaaatttgatggaaggataattttgtcattttaaaatgcaaccagga 12428626  T
Q  135 ttaactagggtgcaagtagaaaaactctt 163  Q
    ||||  |  ||| || |||||||||||||    
T  12428625 ttaaaaaaagtgtaattagaaaaactctt 12428597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 12847146 - 12847258
Alignment:
Q  49 gggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgca 148  Q
    |||||||||||| ||| ||| || | | ||||||||||| |||||||||| |||| |||| || |||||||||  |||||||| ||||||  |||||| |    
T  12847146 gggtgtaaccaagaaaaaagaaagatgctttttgaaaattaaattttatggaagggtaattttatcattttggagtgcaaccaggattaaacagggtgta 12847245  T
Q  149 agtagaaaaactc 161  Q
    | |||||||||||    
T  12847246 attagaaaaactc 12847258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 42436462 - 42436565
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| || ||| | | ||||||||||  |||||||||| |||| |||||||||||||||||| |||| ||| ||    
T  42436462 gaagagggattttagggtgtaaccaagaaaaaatgaagatgctttttgaaaactaaattttatggaagggtaatcttgtcattttggggtgcagccagga 42436561  T
Q  135 ttaa 138  Q
    ||||    
T  42436562 ttaa 42436565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 19687133 - 19687096
Alignment:
Q  124 tgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19687133 tgcaaccatgattaactagggtgcaagtagaaaaactc 19687096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 44709896 - 44709980
Alignment:
Q  77 tttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||| ||||||||| |||||||||| || |||||||  ||| |||||| |||||| ||||||  || |||||||||||    
T  44709896 tttttgaaaattaaattttataaaaggataattttatcattttatgatacaaccaggattaaatagggtataattagaaaaactc 44709980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 29042269 - 29042143
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| || ||| | | || |||||||| || ||||||||||||||||| ||||||||||| | |||||| | ||    
T  29042269 gaagagggattttagggtgtaaccaagaaaaaatgaagatgcttgttgaaaattaa-ttttatgaaaggataattttgtcattttgaggtgcaactagga 29042171  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  | |||| || ||||||||||||    
T  29042170 ttaaacaaggtgtaattagaaaaactct 29042143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 46101921 - 46101846
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcatttt 119  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||  || |||||| ||||||||||    
T  46101921 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatagaaagataattttgtcatttt 46101846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 40305431 - 40305557
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||| | | |  |||||||||| ||||||| ||||||| |||| ||||||||||  | ||||||||  |    
T  40305431 gaagagggattttagggtgtaaccaagaaaaaaggcagatgcattttgaaaattaaattttttgaaagggtaattttgtcatttttaggtgcaaccagaa 40305530  T
Q  135 ttaactagggtgcaagtagaaaaactc 161  Q
    ||||  ||| || || |||||||||||    
T  40305531 ttaaacaggatgtaattagaaaaactc 40305557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 47540417 - 47540332
Alignment:
Q  35 gaagaagggttttggggtgtaaccaa-aaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcatttt 119  Q
    ||||| || |||| |||||||||||| |||| |||||| | | ||||||||||| |||||||||| || |||||| || |||||||    
T  47540417 gaagagggattttagggtgtaaccaagaaaaaaaggaagatgctttttgaaaattaaattttatggaatgataattttatcatttt 47540332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 47546974 - 47546889
Alignment:
Q  35 gaagaagggttttggggtgtaaccaa-aaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcatttt 119  Q
    ||||| || |||| |||||||||||| |||| |||||| | | ||||||||||| |||||||||| || |||||| || |||||||    
T  47546974 gaagagggattttagggtgtaaccaagaaaaaaaggaagatgctttttgaaaattaaattttatggaatgataattttatcatttt 47546889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 241792 - 241685
Alignment:
Q  50 ggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaa 149  Q
    ||||||||||| ||| |||||| | | |||||||||||  ||||||||| |||| |||| || |||||||  | ||||| |||||||||  |||||| ||    
T  241792 ggtgtaaccaagaaaaaaggaagatgctttttgaaaat-taattttatggaagggtaattttatcattttaaggtgcaagcatgattaaacagggtgtaa 241694  T
Q  150 gtagaaaaa 158  Q
     ||||||||    
T  241693 ttagaaaaa 241685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 7883634 - 7883737
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcatttt-gggatgcaaccatg 133  Q
    ||||| || |||| ||||||| |||| ||| |||||| | | ||||||||||| || |||||||||||| |||| || ||||||| ||| |||||||| |    
T  7883634 gaagagggattttagggtgtacccaagaaaaaaggaagatgctttttgaaaattaa-ttttatgaaagggtaattttttcattttgggggtgcaaccagg 7883732  T
Q  134 attaa 138  Q
    |||||    
T  7883733 attaa 7883737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 19474034 - 19473980
Alignment:
Q  63 aagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcatttt 119  Q
    ||||||||||||  ||||| ||||| |||||||||||||||||||| ||||||||||    
T  19474034 aagaaggaatagacttttt-aaaattaaattttatgaaaggataat-ttgtcatttt 19473980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 5e-80; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 15011979 - 15011817
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15011979 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 15011880  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15011879 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 15011817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 21658087 - 21657926
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21658087 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 21657988  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  21657987 aggataatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactct 21657926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 1481971 - 1481811
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1481971 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 1481872  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1481871 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 1481811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 25853357 - 25853517
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25853357 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 25853456  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25853457 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 25853517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 44143520 - 44143360
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44143520 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 44143421  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44143420 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 44143360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 45505710 - 45505873
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  45505710 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaattaaattttatgaa 45505809  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45505810 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcttt 45505873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 42343128 - 42342966
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42343128 aacacaatcgatcgattggagaattatggttttgaaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 42343029  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42343028 aggataatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 42342966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 2390611 - 2390768
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2390611 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 2390710  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaa 158  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  2390711 aggataatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaa 2390768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 1520336 - 1520176
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1520336 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 1520237  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1520236 agggtaatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 1520176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 13196062 - 13196222
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  13196062 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccacaaaagaaggaataggctttttgaaaatcaaattttatgaa 13196161  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13196162 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 13196222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 40811697 - 40811857
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40811697 aacacaatctatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 40811796  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40811797 aggataatcttttcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 40811857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 34202439 - 34202277
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34202439 aacacaatcaatcgattggagaattatggtttttgaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 34202340  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  34202339 aggataatcttgtcattttggggtgtaaccatgattaactagggtgcaagtagaaaaactctt 34202277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37094248 - 37094086
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37094248 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 37094149  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    | ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  37094148 aagataatcttatcattttggtatgcaaccatgattaactagagtgcaagtagaaaaactctt 37094086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 39697702 - 39697862
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  39697702 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatatgctttttgaaaatcaaattttatgaa 39697801  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  39697802 agggtaatcttgtcattttggggtgcaactatgattaactagggtgcaagtagaaaaactc 39697862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 3178386 - 3178225
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3178386 aacacaatcgatcgattggagaattatggctttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 3178287  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||    
T  3178286 agggtaatcttatcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactct 3178225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 43577163 - 43577015
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43577163 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 43577064  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaa 149  Q
    ||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  43577063 agggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaa 43577015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 10638937 - 10638775
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  10638937 aacagaatcgatcgattggagaattatggttttggaagaggggttt-ggggtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaa 10638839  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||| ||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||    
T  10638838 agggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaggtagaaaaactcttt 10638775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 927164 - 927061
Alignment:
Q  61 aaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaact 160  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  927164 aaaagaaggaataggctttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaact 927065  T
Q  161 cttt 164  Q
    ||||    
T  927064 cttt 927061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 875044 - 874953
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaat 92  Q
    ||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  875044 aacacgatcgattgattggagaattatggttttggaagaggggttttggggtgtaaccaagaaataaggaataggctttttgaaaatcaaat 874953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 32551681 - 32551753
Alignment:
Q  90 aattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32551681 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 32551753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 35895563 - 35895492
Alignment:
Q  90 aattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  35895563 aattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactc 35895492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 38629368 - 38629494
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| ||  ||||||||||| |||||||||||||||||||| || ||||||| ||||||||||| ||    
T  38629368 gaagagggattttagggtgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttatgaaaggataattttatcattttaggatgcaaccagga 38629467  T
Q  135 ttaactagggtgcaagtagaaaaactc 161  Q
    ||||  |||||| || |||||||||||    
T  38629468 ttaaagagggtgtaattagaaaaactc 38629494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 4331840 - 4331967
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| ||||||  |  ||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||| ||    
T  4331840 gaagagggattttagggtgtaaccaagaaaaaaggaagtgtctttttgaaaattaaattttatgaaagggtaattttgtcattttaggatgcaaccagga 4331939  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  |||||| || ||||||||||||    
T  4331940 ttaaagagggtgtaattagaaaaactct 4331967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 27980924 - 27980994
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| |||| ||  |||||||||||||    
T  27980924 aaattttatgaaaggataatcttgtcattttggggtgtaaccatgattaagtaggatg--agtagaaaaactc 27980994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 28067454 - 28067524
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| |||| ||  |||||||||||||    
T  28067454 aaattttatgaaaggataatcttgtcattttggggtgtaaccatgattaagtaggatg--agtagaaaaactc 28067524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 13480508 - 13480636
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| ||||||||||||||| |||| ||||||||||  | ||||| || ||    
T  13480508 gaagagggattttagggtgtaaccaagaaaaaaggaaaatgctttttgaaaattaaattttatgaaagggtaattttgtcattttaaggtgcaatcagga 13480607  T
Q  135 ttaactagggtgcaagtagaaaaactctt 163  Q
    ||||  | |||| || |||||||||||||    
T  13480608 ttaaacatggtgtaattagaaaaactctt 13480636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 163
Target Start/End: Original strand, 458577 - 458696
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||  || |||||| || ||||||| ||||||||||| ||||||  ||     
T  458577 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatagaatgataattttatcattttaggatgcaaccaggattaaacaga 458676  T
Q  144 gtgcaagtagaaaaactctt 163  Q
    ||| || |||||||||||||    
T  458677 gtgtaattagaaaaactctt 458696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 44456780 - 44456867
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaacca 131  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| ||||||||||||||| |||| || ||||||| |||||||||||    
T  44456780 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaagggtaattttatcattttaggatgcaacca 44456867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 26171093 - 26170975
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| ||  || | | ||||||||||| |||||||||| |||| |||| |||| |||||||| |||||||| ||||||  |||    
T  26171093 ttttagggtgtaaccaagaaaaaaaaaagatgctttttgaaaattaaattttatggaagggtaattttgttattttggggtgcaaccaagattaaacagg 26170994  T
Q  144 gtgcaagtagaaaaactct 162  Q
    ||| || ||||||||||||    
T  26170993 gtgtaattagaaaaactct 26170975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 7722641 - 7722761
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | |||||| |||| |||||||||| |||| |||| || |||||||| | ||||||||  |||||  |||    
T  7722641 ttttagggtgtaaccaagaaaaaaggaagatgctttttgtaaattaaattttatggaagggtaattttatcattttgaggtgcaaccagaattaaacagg 7722740  T
Q  144 gtgcaagtagaaaaactcttt 164  Q
    ||| || ||||||||||||||    
T  7722741 gtgtaattagaaaaactcttt 7722761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 5109181 - 5109238
Alignment:
Q  62 aaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcatttt 119  Q
    |||||||||| ||||||||||||||| |||||||||| ||| ||||| ||||||||||    
T  5109181 aaagaaggaagaggttttttgaaaattaaattttatgtaagaataattttgtcatttt 5109238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 44798933 - 44798809
Alignment:
Q  36 aagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgat 135  Q
    |||| |||||||||||||||||| | ||| |||||| ||| ||||||||| | ||||||||||||||  |||| |||||||||||   || ||||| |||    
T  44798933 aagaggggttttggggtgtaaccgagaaa-aaggaagaggctttttgaaacttaaattttatgaaagagtaattttgtcattttgaagtgtaaccaggat 44798835  T
Q  136 taactagggtgcaagtagaaaaactc 161  Q
    |||  |||||| || || ||||||||    
T  44798834 taaacagggtgtaattaaaaaaactc 44798809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 45443516 - 45443640
Alignment:
Q  36 aagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgat 135  Q
    |||| |||||||||||||||||| | ||| || ||| ||| ||||||||||| ||||||||||||||| |||| || |||||||| | || || || |||    
T  45443516 aagaggggttttggggtgtaaccgagaaa-aatgaagaggctttttgaaaattaaattttatgaaagggtaattttatcattttgaggtgtaatcaggat 45443614  T
Q  136 taactagggtgcaagtagaaaaactc 161  Q
    |||  | |||| || |||||||||||    
T  45443615 taaacatggtgtaattagaaaaactc 45443640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 31569635 - 31569702
Alignment:
Q  52 tgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcatttt 119  Q
    ||||||||| ||| |||||| | | ||||||||||| |||||||||| ||||||||| ||||||||||    
T  31569635 tgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggataattttgtcatttt 31569702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 927204 - 927170
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttgg 35  Q
    |||||||||||||||||||||||||||||||||||    
T  927204 aacacaatcgatcgattggagaattatggttttgg 927170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 16202115 - 16202063
Alignment:
Q  162 tttagagaactctaatgcatattacatcatatttcaattataatttataataa 214  Q
    ||||||||||| ||||  |||||| |||||||||||||| |||||||||||||    
T  16202115 tttagagaactttaatatatattatatcatatttcaattctaatttataataa 16202063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 31640769 - 31640838
Alignment:
Q  39 aagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataat 108  Q
    |||||||||||||| ||||||  || ||||||| ||| ||||||||||| ||||||  || |||||||||    
T  31640769 aagggttttggggtataaccatgaatgaaggaagaggctttttgaaaattaaatttattggaaggataat 31640838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 4073497 - 4073541
Alignment:
Q  75 gttttttgaaaatcaaattttatgaaaggataatcttgtcatttt 119  Q
    ||||||||||||| |||||||||| ||||||||| || |||||||    
T  4073497 gttttttgaaaattaaattttatggaaggataattttatcatttt 4073541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 8034942 - 8035030
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataa-tcttgtcattttgggatgcaacca 131  Q
    |||| ||||||||| |||||| |||||| |  |||||||||||| ||||||||| |||  |||| | || |||||||| ||||||||||    
T  8034942 ttttagggtgtaacaaaaaaaaaaggaagatattttttgaaaattaaattttataaaaaaataatttttatcattttgagatgcaacca 8035030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 10554733 - 10554812
Alignment:
Q  45 tttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatg 125  Q
    |||| ||||||||||| ||| |||||| ||| ||||||||||| ||||||||| ||||  |||| || |||||||| ||||    
T  10554733 tttgaggtgtaaccaagaaa-aaggaagaggctttttgaaaattaaattttataaaagagtaattttatcattttgtgatg 10554812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20835519 - 20835680
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20835519 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 20835618  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20835619 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 20835680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 10841369 - 10841529
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10841369 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 10841468  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10841469 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 10841529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 37971611 - 37971771
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  37971611 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaatgaataggctttttgaaaatcaaattttatgaa 37971710  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37971711 aggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 37971771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22781844 - 22782007
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22781844 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 22781943  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  22781944 agggtaatcttgtcattttgtggtgcaaccatgattaactagggtgcaagtagaaaaactcttt 22782007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38871280 - 38871118
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38871280 aacacaatcgatcgattggagaattatggttttggaagaatggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 38871181  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  38871180 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaactagaaaaactctt 38871118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 4044745 - 4044906
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4044745 aacacaatcgatcgattgaagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 4044844  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  4044845 agggtaatcttgttattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 4044906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25711046 - 25710885
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25711046 aacaccatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 25710947  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  25710946 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaactagaaaaactct 25710885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 40586108 - 40586269
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  40586108 aacacaatcgatcgattggagaattatggttttggaagaaaggttttggggtgtaaccaaaaaagaaggaatatgctttttgaaaatcaaattttatgaa 40586207  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40586208 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 40586269  T

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Target: chr3; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 53974470 - 53974310
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53974470 aacacaatcgatggattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 53974371  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
     || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  53974370 tgggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 53974310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 41069995 - 41069837
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41069995 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 41069896  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaact 160  Q
    ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  41069895 agggtaatcttgtcattttagg-tgcaaccatgattaactagggtgcaagtagaaaaact 41069837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 33712560 - 33712721
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33712560 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 33712659  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||    
T  33712660 agggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagt-gaaaaactctt 33712721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4515951 - 4516113
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4515951 aacacaatgaatcgattggagaattatggttttggaagaaaggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 4516050  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  4516051 agggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactctt 4516113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 36430427 - 36430267
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||    
T  36430427 aacacaatcgatcgattggagaattatgattttggaagaagggttttggggtgtaacaaaaaaagaaggaataggctttttgaaaatcaaattttatcaa 36430328  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36430327 agagtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 36430267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 10999683 - 10999843
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  10999683 aacacaatcgatctattgcagaattatggttttggaagaggggttttgggatgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaa 10999782  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10999783 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 10999843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 20048494 - 20048334
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  20048494 aacacaatcgatcgattgtagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaa 20048395  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  20048394 agggtaatcttgtcattttggggtgcaaccatgattaactaggatgcaagtagaaaaactc 20048334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 7156613 - 7156770
Alignment:
Q  6 aatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggat 105  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||  | ||||||||||||||||||||||||| |    
T  7156613 aatcgatcgtttggagaaatatggttttggaagaggggttttggggtgtaacctaaaaagaaggaatagactctttgaaaatcaaattttatgaaagggt 7156712  T
Q  106 aatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7156713 aatcttatcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 7156770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 33967014 - 33966893
Alignment:
Q  42 ggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaacta 141  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33967014 ggttttggggtgtaaccaaaaaagaaggaatagactttttgaaaatcaaattttatgaaagggtaatcttgtcattttgggatgcaaccatgattaacta 33966915  T
Q  142 gggtgcaagtagaaaaactctt 163  Q
    ||||||||||||||||||||||    
T  33966914 gggtgcaagtagaaaaactctt 33966893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 6268295 - 6268422
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||    
T  6268295 aacacaatcgatcgattggagaattatggttttggaagaacggttttggggtgtaataaaaaaagaaggaataggctttttgaaaatcaaattttaggaa 6268394  T
Q  101 aggataatcttgtcattttgggatgcaa 128  Q
    ||| |||||||||||||||||| |||||    
T  6268395 agggtaatcttgtcattttggggtgcaa 6268422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 32236204 - 32236131
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32236204 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 32236131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 84460 - 84388
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  84460 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 84388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 20657412 - 20657487
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  20657412 aaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactcttt 20657487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 26090273 - 26090199
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  26090273 aaattttatgaaagggtaatcttgtcattttgaggtgcaaccatgattaactagggtgcaagtagaaaaactctt 26090199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 7679722 - 7679794
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  7679722 aaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactc 7679794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 24395167 - 24395096
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaact 160  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  24395167 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaggatgcaagtagaaaaact 24395096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 44354469 - 44354596
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    |||||||  |||| |||||||||||| ||| | |||||| ||||||||||||| |||||||||| |||||||||  |||||||||||| |||||||| ||    
T  44354469 gaagaagaattttagggtgtaaccaagaaaaatggaatatgttttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccagga 44354568  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  |||||| || ||||||||||||    
T  44354569 ttaaacagggtgtaattagaaaaactct 44354596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 165
Target Start/End: Original strand, 2613306 - 2613427
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | ||||||||||||| |||||||||||||||||||| || ||||||||  ||||||||| ||||||  |||    
T  2613306 ttttagggtgtaaccaagaaaaaaggaagatgttttttgaaaattaaattttatgaaaggataattttatcattttgaaatgcaaccaagattaaacagg 2613405  T
Q  144 gtgcaagtagaaaaactcttta 165  Q
    ||| || |||||| ||||||||    
T  2613406 gtgtaattagaaatactcttta 2613427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 36885711 - 36885839
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| ||||||||||||||| |||| |||||||||| || |||||||| ||    
T  36885711 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaataaaattttatgaaagggtaattttgtcattttagggtgcaaccagga 36885810  T
Q  135 ttaactagggtgcaagtagaaaaactctt 163  Q
    ||||  |||||| || |||||||||||||    
T  36885811 ttaaacagggtgtaattagaaaaactctt 36885839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 49779834 - 49779928
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| ||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  49779834 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaaagataattttgtcattttgggatgcaaccaagattaa 49779928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 672139 - 672066
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||| ||||||| |||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  672139 aaattttatgaaagggtaatcttatcattttggagtgcaaccatgattaactagggtgcaactagaaaaactct 672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 161
Target Start/End: Complemental strand, 35039689 - 35039572
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| |||| |||| ||||||||||||| |||||||| ||||||  |||    
T  35039689 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaaaagg 35039590  T
Q  144 gtgcaagtagaaaaactc 161  Q
    ||| || |||||||||||    
T  35039589 gtgtaattagaaaaactc 35039572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 161
Target Start/End: Original strand, 7680981 - 7681100
Alignment:
Q  42 ggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaacta 141  Q
    |||||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| |||| |||| |||||||||| || ||||||||  ||||| ||    
T  7680981 ggttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttagggtgcaaccagaattaaata 7681080  T
Q  142 gggtgcaagtagaaaaactc 161  Q
    ||||| || |||||||||||    
T  7681081 gggtgtaattagaaaaactc 7681100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 47098274 - 47098357
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattt 118  Q
    |||||||||||||||||||||||||| |||||||||| ||  ||||||||||| |||||||||| |||| |||| |||||||||    
T  47098274 gaagaagggttttggggtgtaaccaagaaagaaggaagagactttttgaaaatgaaattttatgcaagggtaattttgtcattt 47098357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 164
Target Start/End: Original strand, 38145211 - 38145340
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| ||  ||||||||||| ||||||||||||||| |||| |||||||||| || ||||||||  |    
T  38145211 gaagagggattttagggtgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccagaa 38145310  T
Q  135 ttaactagggtgcaagtagaaaaactcttt 164  Q
    ||||  ||| || || ||||||||||||||    
T  38145311 ttaaacaggatgtaattagaaaaactcttt 38145340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 30418816 - 30418689
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    |||||||  |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||  |||||||||  |||||||||||  |||| ||||||    
T  30418816 gaagaagaattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatagaaggataattctgtcattttggagtgcagccatga 30418717  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  |||||| || ||||||||||||    
T  30418716 ttaaacagggtgtaattagaaaaactct 30418689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 36232642 - 36232769
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| ||  ||||| ||||| ||||||||||||||| |||| |||||||||| || |||||||| ||    
T  36232642 gaagagggattttagggtgtaaccaagaaaaaaggaagagtcttttttaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccagga 36232741  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  | |||| || ||||||||||||    
T  36232742 ttaaacatggtgtaattagaaaaactct 36232769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 39627093 - 39627176
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcatttt 119  Q
    ||||| ||||||||||||||||||||||||||||||| |   ||||| ||||| ||||||||| |||||||||| ||||||||||    
T  39627093 gaagaggggttttggggtgtaaccaaaaaagaaggaaaatactttttaaaaat-aaattttataaaaggataattttgtcatttt 39627176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 51662148 - 51662236
Alignment:
Q  50 ggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    ||||||||||| ||| |||||| | | ||||||||||| |||||||||| ||||||||| || ||||||| ||||||||||| ||||||    
T  51662148 ggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggataattttatcattttaggatgcaaccaggattaa 51662236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 33392628 - 33392510
Alignment:
Q  43 gttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactag 142  Q
    |||||||| ||||||| | ||| |||||| ||  ||||||||||| ||||||||||||| | |||| ||||||||||||| |  ||||| |||||| |||    
T  33392628 gttttgggatgtaaccgagaaa-aaggaaaagactttttgaaaattaaattttatgaaaaggtaattttgtcattttggggtataaccaggattaaatag 33392530  T
Q  143 ggtgcaagtagaaaaactct 162  Q
    |||| || ||||||||||||    
T  33392529 ggtgtaattagaaaaactct 33392510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 54556467 - 54556376
Alignment:
Q  41 gggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccat 132  Q
    |||||||||||||||||||| | |||||||| |   ||||| ||||||||||||||||||||| |||| || ||||||| ||||| ||||||    
T  54556467 gggttttggggtgtaaccaagagagaaggaagaaactttttaaaaatcaaattttatgaaagggtaattttatcattttaggatgtaaccat 54556376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 11095773 - 11095647
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| |||| ||||  |||| || | ||||||||||  |||||||||| ||    
T  11095773 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaatattatagaagggtatttttgtcattttatgatgcaaccagga 11095674  T
Q  135 ttaactagggtgcaagtagaaaaactc 161  Q
    |||| ||||||| || |||||||||||    
T  11095673 ttaaatagggtgtaattagaaaaactc 11095647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 11123984 - 11123858
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| ||| || |   ||||||||||| |||||||||| |||| |||| |||||||||||||  ||||||| ||    
T  11123984 gaagagggattttagggtgtaaccaagaaaaaagaaagatactttttgaaaattaaattttatggaagggtaattttgtcattttggggcgcaaccagga 11123885  T
Q  135 ttaactagggtgcaagtagaaaaactc 161  Q
    |||| ||| ||| || |||||||||||    
T  11123884 ttaaatagagtgtaattagaaaaactc 11123858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 4596411 - 4596523
Alignment:
Q  49 gggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgca 148  Q
    |||||||||||| ||| |||||| | | ||||||||||| || ||||||| |||| |||| |||||||||||||||||||| | ||||||  ||| || |    
T  4596411 gggtgtaaccaagaaaaaaggaagatgctttttgaaaattaa-ttttatggaagggtaattttgtcattttgggatgcaactaggattaaacaggatgta 4596509  T
Q  149 agtagaaaaactct 162  Q
    | ||||||||||||    
T  4596510 attagaaaaactct 4596523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 22786331 - 22786371
Alignment:
Q  124 tgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22786331 tgcaaccatgattaactagggtgcaagtagaaaaactcttt 22786371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 48584943 - 48584857
Alignment:
Q  52 tgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    ||||||||| ||| ||| || | | ||||||||||| |||||||||||||||||||| ||||||||||||  | |||||| ||||||    
T  48584943 tgtaaccaagaaaaaagaaagatgctttttgaaaattaaattttatgaaaggataattttgtcattttggagtacaaccaggattaa 48584857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 36841085 - 36841202
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| |||| |||| || |||||||| | | |||||| ||||||  |||    
T  36841085 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagggtaattttatcattttgaggtacaaccaggattaaaaagg 36841184  T
Q  144 gtgcaagtagaaaaactc 161  Q
     || || |||||||||||    
T  36841185 atgtaattagaaaaactc 36841202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 52343208 - 52343124
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcatttt 119  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| ||| ||||| ||||||||||    
T  52343208 gaagatggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagaataattttgtcatttt 52343124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 162
Target Start/End: Complemental strand, 52812237 - 52812127
Alignment:
Q  51 gtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaag 150  Q
    |||||||||| ||| |||||| | | ||||||||||| |||||||||| ||| ||||| |||||||||| | || ||| || ||||||  |||||| ||     
T  52812237 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagaataattttgtcatttt-gaatacaatcaggattaaacagggtgtaat 52812139  T
Q  151 tagaaaaactct 162  Q
    ||||||||||||    
T  52812138 tagaaaaactct 52812127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 8947833 - 8947914
Alignment:
Q  36 aagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattt 118  Q
    |||| ||||||| ||||||||| ||  ||||||||| ||| ||||||||||||||| | ||||||| |||||| |||||||||    
T  8947833 aagaggggttttagggtgtaacaaaggaagaaggaagaggctttttgaaaatcaaactatatgaaa-gataattttgtcattt 8947914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 35233645 - 35233738
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    |||| |||||||||||| ||| ||| || | ||||||| ||||| || ||||||||||||||||| || ||||||| | ||||||||| ||||||    
T  35233645 ttttagggtgtaaccaagaaaaaagaaagatgttttttaaaaattaa-ttttatgaaaggataattttatcattttagaatgcaaccaggattaa 35233738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 14279232 - 14279129
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| || ||| | | ||||||||||| |||||||||| ||   |||| |||||||||| || |||||||| ||    
T  14279232 gaagagggattttagggtgtaaccaagaaaaaatgaacatgctttttgaaaattaaattttatggaaaagtaattttgtcattttagggtgcaaccagga 14279133  T
Q  135 ttaa 138  Q
    ||||    
T  14279132 ttaa 14279129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 19941799 - 19941681
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| ||||||||| || ||| |||||| | | ||||||||||| |||||||||| ||| ||||| || ||||||| |  ||||||||  |||||  ||     
T  19941799 ttttagggtgtaacaaagaaaaaaggaagatgctttttgaaaattaaattttatggaagaataattttatcattttagagtgcaaccagaattaaacagt 19941700  T
Q  144 gtgcaagtagaaaaactct 162  Q
    ||| || ||||||||||||    
T  19941699 gtgtaattagaaaaactct 19941681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 33967041 - 33967007
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttgg 35  Q
    |||||||||||||||||| ||||||||||||||||    
T  33967041 aacacaatcgatcgattgaagaattatggttttgg 33967007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 17122250 - 17122087
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17122250 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 17122151  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17122150 agggtaatcttgttattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcttt 17122087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 39365406 - 39365248
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39365406 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 39365307  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaac 159  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39365306 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaac 39365248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 23357180 - 23357340
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23357180 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 23357279  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    | | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23357280 aaggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 23357340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26122449 - 26122612
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  26122449 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatatgctttttgaaaatcaaattttatgaa 26122548  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26122549 agggtaatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcttt 26122612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 3032821 - 3032983
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||    
T  3032821 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaagaaataggctttttgaaaatcaaatgttatgaa 3032920  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3032921 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 3032983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 26290702 - 26290863
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  26290702 aacacaatcgatcgattggagaattatggttttggaagaaggattttggggtgtaaccaaaaaagaaggaatgggctttttgaaaatcaaattttatgaa 26290801  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26290802 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 26290863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 26303959 - 26304120
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  26303959 aacacaatcgatcgattggagaattatggttttggaagaaggattttggggtgtaaccaaaaaagaaggaatgggctttttgaaaatcaaattttatgaa 26304058  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26304059 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 26304120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 26337314 - 26337475
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  26337314 aacacaatcgatcgattggagaattatggttttggaagaaggattttggggtgtaaccaaaaaagaaggaatgggctttttgaaaatcaaattttatgaa 26337413  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26337414 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 26337475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 22439529 - 22439693
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22439529 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 22439628  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttta 165  Q
    ||| |||||||||||||||| | || ||||||||||||||||| |||||||||||||||||||||    
T  22439629 agggtaatcttgtcattttgaggtgtaaccatgattaactaggatgcaagtagaaaaactcttta 22439693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 35605495 - 35605336
Alignment:
Q  3 cacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaag 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35605495 cacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaaag 35605396  T
Q  103 gataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    | |||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  35605395 ggtaatcttgtcattttgaggtgcaaccatgattaactagggtgtaagtagaaaaactct 35605336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 34564955 - 34565113
Alignment:
Q  4 acaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaagg 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||    
T  34564955 acaatcgatcgattggagaattatgattttggaagaagggttttggggtgtaacaaaaaaagaaggaataggctttttgaaaatcaaattttataaaagg 34565054  T
Q  104 ataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34565055 ataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 34565113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 8376400 - 8376243
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  8376400 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatagactttttgaaaatcaaattttatgaa 8376301  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaa 158  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  8376300 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaactagaaaaa 8376243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 8656714 - 8656553
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  8656714 aacacaatcgatcgattggagaattatggttttggaataagggttttggggtgtaaccaaaaaagaaggaatagactttttgaaaatcaaattttatgaa 8656615  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  8656614 aggttaatcttgtcatttttggttgcaaccatgattaactagggtgcaagtagaaaaactct 8656553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 24822647 - 24822807
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24822647 aacaccatcgatcgattggagaattatggttttggaagaatggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 24822746  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  24822747 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaactagaaaaactc 24822807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 42512319 - 42512159
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42512319 aacacaatcgatcgattggagaattataattttggaagaggggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 42512220  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42512219 agggtaatcttgtcattttgggatgcaaccatgattaactaggatgcaagtagaaaaactc 42512159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 34917698 - 34917539
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  34917698 aacacaattgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatagactttttgaaaatcaaattttatgaa 34917599  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaact 160  Q
    ||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  34917598 agggtaatcttgtcattttggggtgcatccatgattaactagggtgcaagtagaaaaact 34917539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 43664249 - 43664408
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43664249 aacacaatc-atcaattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 43664347  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  43664348 agggtaatcttgtcattttgaggtgcaaccatgattaactagggtgcaagtagaaaaactc 43664408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 3137148 - 3137312
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  3137148 aacacaatcgattgattggagaattatggttttcgaagaggggttttggggtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaa 3137247  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttta 165  Q
    ||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  3137248 agggtaatcttgtcattttggggtgcaaccatgattaactacggtgcaagtagaaaaactcttta 3137312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 5988348 - 5988188
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  5988348 aacacaatcaatcgattggagaattatggttttggaagaggggttttgggatgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaa 5988249  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5988248 agggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 5988188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 5599872 - 5599946
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5599872 aaattttatgaaagggtaatcttgtcattttggaatgcaaccatgattaactagggtgcaagtagaaaaactctt 5599946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 5640748 - 5640674
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5640748 aaattttatgaaagggtaatcttgtcattttggaatgcaaccatgattaactagggtgcaagtagaaaaactctt 5640674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 28885723 - 28885797
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28885723 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 28885797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 28909734 - 28909661
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28909734 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 28909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 15839527 - 15839455
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15839527 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 15839455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 11587970 - 11587895
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  11587970 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaattagggtgcaagtagaaaaactcttt 11587895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 12713578 - 12713661
Alignment:
Q  79 tttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||||||| ||| | |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12713578 tttgaaaatcaaattttataaaaaggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 12713661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 8013936 - 8014008
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  8013936 aaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactc 8014008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 37578055 - 37577983
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  37578055 aaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactc 37577983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 41942319 - 41942447
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| ||| || | | ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||    
T  41942319 gaagagggattttagggtgtaaccaagaaaaaagtaagatgctttttgaaaattaaattttatggaaggataattttgtcattttgggatgcaaccagga 41942418  T
Q  135 ttaactagggtgcaagtagaaaaactctt 163  Q
    ||||  |||||| || |||||||||||||    
T  41942419 ttaaacagggtgtaattagaaaaactctt 41942447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 17601406 - 17601333
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  17601406 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaaggtgcaattagaaaaactct 17601333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 31793821 - 31793933
Alignment:
Q  49 gggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgca 148  Q
    |||||||||||| ||| |||||| | | ||||||||||| |||||||||| |||| |||| ||||||||||||| |||||||| ||||||  |||||| |    
T  31793821 gggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaacagggtgta 31793920  T
Q  149 agtagaaaaactc 161  Q
    | |||||||||||    
T  31793921 attagaaaaactc 31793933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 36057699 - 36057817
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| |||||||||  |||||||||||| ||||||||  |||||  |||    
T  36057699 ttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccagaattaaacagg 36057798  T
Q  144 gtgcaagtagaaaaactct 162  Q
    ||| || ||||||||||||    
T  36057799 gtgtaattagaaaaactct 36057817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 4229753 - 4229637
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | ||||||||||||| |||||||||| |||||||||  ||||||||||  ||||||||| ||||||  |||    
T  4229753 ttttagggtgtaaccaagaaaaaaggaagatgttttttgaaaattaaattttatggaaggataattctgtcattttgaaatgcaaccaggattaaacagg 4229654  T
Q  144 gtgcaagtagaaaaact 160  Q
     || || ||||||||||    
T  4229653 atgtaattagaaaaact 4229637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 12722682 - 12722559
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| || ||| | | ||||||||||| |||||||||| |||| |||| ||||||||||||| |||||||| ||    
T  12722682 gaagagggattttagggtgtaaccaagaaaaaatgaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccagga 12722583  T
Q  135 ttaactagggtgcaagtagaaaaa 158  Q
    ||||  |||||| || ||||||||    
T  12722582 ttaaacagggtgtaattagaaaaa 12722559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 42687908 - 42688025
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| |||||| | | ||||| ||||| |||||||||| |||| |||| ||||||||||||| |||||||| ||||||  ||     
T  42687908 ttttagggtgtaaccaagaaaaaaggaagatgctttttaaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaagattaaacaga 42688007  T
Q  144 gtgcaagtagaaaaactc 161  Q
    ||| || |||||||||||    
T  42688008 gtgtaattagaaaaactc 42688025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 4005891 - 4005764
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||| ||||||| ||| |||||| | | ||||||||||| |||||||||| |||| |||| ||||||||||  ||| |||||| ||    
T  4005891 gaagagggattttagggtataaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttaagatacaaccagga 4005792  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  |||||| || ||||||||||||    
T  4005791 ttaaacagggtgtaattagaaaaactct 4005764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 38168452 - 38168539
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaacca 131  Q
    |||| |||||||||||| ||| |||||||| | ||||||||||| |||||||||| |||| |||| || |||||||||  ||||||||    
T  38168452 ttttagggtgtaaccaagaaaaaaggaatatgctttttgaaaattaaattttatggaagggtaattttatcattttggagtgcaacca 38168539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 38945772 - 38945711
Alignment:
Q  77 tttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    ||||||||||| |||||||||| ||||||||| |||||||||| || |||||||| ||||||    
T  38945772 tttttgaaaattaaattttatggaaggataattttgtcattttagggtgcaaccaggattaa 38945711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 5347437 - 5347560
Alignment:
Q  36 aagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgat 135  Q
    |||| |||||||||||||||||| | ||| |||||| ||| ||||||||| | ||||||||||||||| |||| || |||||||  | || ||||| |||    
T  5347437 aagaggggttttggggtgtaaccgataaa-aaggaagaggctttttgaaacttaaattttatgaaagggtaattttatcattttaaggtgtaaccaggat 5347535  T
Q  136 taactagggtgcaagtagaaaaact 160  Q
    |||  ||| || || ||||||||||    
T  5347536 taaacaggatgtaattagaaaaact 5347560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 7969992 - 7970075
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcatttt 119  Q
    ||||| |||||||| ||||||||||| |||||||||| ||  ||||| ||||| ||||||||||||| | |||| ||||||||||    
T  7969992 gaagaggggttttgaggtgtaaccaagaaagaaggaaaagactttttaaaaat-aaattttatgaaaaggtaattttgtcatttt 7970075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 11266259 - 11266156
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||  |||  ||||||| |||||||| | |||||||| ||    
T  11266259 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatagaagagtaatcttatcattttgaggtgcaaccagga 11266160  T
Q  135 ttaa 138  Q
    ||||    
T  11266159 ttaa 11266156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 162
Target Start/End: Complemental strand, 38234527 - 38234416
Alignment:
Q  51 gtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaag 150  Q
    |||||||||| ||| ||| || | | ||||| ||||| |||||||||| |||||| || |||||||||||   ||||| || |||||| ||||||| ||     
T  38234527 gtgtaaccaagaaaaaagaaagatgctttttaaaaattaaattttatggaaggatcattttgtcattttgaagtgcaaacaggattaaatagggtgtaat 38234428  T
Q  151 tagaaaaactct 162  Q
    ||||||||||||    
T  38234427 tagaaaaactct 38234416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 38460060 - 38460186
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| ||||||||| |||||| |||||| | | |||| |||||| || ||||||  |||| |||| ||||||||||| | |||||||| ||    
T  38460060 gaagagggattttagggtgtaacaaaaaaaaaaggaagatgcttttcgaaaattaa-ttttatagaagggtaattttgtcattttgaggtgcaaccagga 38460158  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  |||||| || ||||||||||||    
T  38460159 ttaatcagggtgtaattagaaaaactct 38460186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 35329727 - 35329812
Alignment:
Q  77 tttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||| || ||||||| ||||||||| ||||||||||||  |||||||| ||||||  | |||| || |||||||||||||    
T  35329727 tttttgaaaattaa-ttttatggaaggataattttgtcattttggagtgcaaccaggattaaacatggtgtaattagaaaaactctt 35329812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 5621 - 5552
Alignment:
Q  50 ggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcatttt 119  Q
    ||||||||||| ||| |||||| |   ||||||||||| |||||||||| ||||||||| ||||||||||    
T  5621 ggtgtaaccaagaaaaaaggaagatactttttgaaaattaaattttatggaaggataattttgtcatttt 5552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 28620416 - 28620483
Alignment:
Q  94 ttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||| |||||||||  |||||||||||| ||||| || |||||| ||||||| || |||||||||||    
T  28620416 ttatggaaggataattctgtcattttggggtgcaatcaagattaaatagggtgtaattagaaaaactc 28620483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 39712774 - 39712700
Alignment:
Q  63 aagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    ||||||||| ||| ||||| ||||| ||||||||||||| |||||| || ||||||| ||||| ||||| ||||||    
T  39712774 aagaaggaagaggcttttt-aaaattaaattttatgaaaagataattttatcattttaggatgtaaccaggattaa 39712700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 16571214 - 16571303
Alignment:
Q  41 gggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaacca 131  Q
    ||||||| |||||||||||| ||||||||||   | ||||| ||||| ||| ||||||||||| || | ||||||||||||| || |||||    
T  16571214 gggttttcgggtgtaaccaagaaagaaggaaacagctttttaaaaat-aaactttatgaaagggtagttttgtcattttgggttgaaacca 16571303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4035 - 3873
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4035 aacacaatcgatcgattggagaattatggttttggaataagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 3936  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3935 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 3873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 14022 - 13860
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14022 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 13923  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  13922 agggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactctt 13860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 4156094 - 4156254
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4156094 aacacaatcgatcgattggagaattatgattttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 4156193  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4156194 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 4156254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 9065858 - 9065698
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9065858 aacacaatcgatcaattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 9065759  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9065758 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 9065698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 31527503 - 31527664
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31527503 aacacaatcgatcgattgaagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 31527602  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  31527603 agggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactct 31527664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 13145806 - 13145966
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  13145806 aacacaatcgatcgatttgagaattatggttttggaagaagggttttggggtgtaatcaaaaaagaaggaaaaggttttttgaaaatcaaattttatgaa 13145905  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13145906 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 13145966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 43293583 - 43293743
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  43293583 aacacaatcgatctgttggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttataaa 43293682  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43293683 aggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 43293743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19034646 - 19034809
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  19034646 aacacaatcgatcgattggagaattatggttttggaagaagggttttgggatgtaaccaaaaaagaaggaataagctttttgaaaatcaaattttatgaa 19034745  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  19034746 aggataatcttgttattttggggtgcaaccatgattaactaaggtgcaagtagaaaaactcttt 19034809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 33280969 - 33280808
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33280969 aacacaatcgatcggttggaaaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 33280870  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  33280869 agggtaatcttgtcattttggggtacaaccatgattaactagggtgcaagtagaaaaactct 33280808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 24559228 - 24559065
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||| |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  24559228 aacacagtcgatcgattagagaattatggttttgtaagaaaggttttggggtgtaaccaaaaaagaaggaatagactttttgaaaatcaaattttatgaa 24559129  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  24559128 agggtaatcttgtcattttggggtgcaaccatgactaactagggtgcaagtagaaaaactcttt 24559065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 24600260 - 24600097
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||| |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  24600260 aacacagtcgatcgattagagaattatggttttgtaagaaaggttttggggtgtaaccaaaaaagaaggaatagactttttgaaaatcaaattttatgaa 24600161  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  24600160 agggtaatcttgtcattttggggtgcaaccatgactaactagggtgcaagtagaaaaactcttt 24600097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37866035 - 37865873
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  37866035 aacacaatcgattgattggagaattatggttttggaagaatggttttggggtgtaaccaaaaaagaagaaataggctttttgaaaatcaaattttatgaa 37865936  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    |||||||| ||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||||    
T  37865935 aggataattttgtcattttggggtgcaatcatgattaattagagtgcaagtagaaaaactctt 37865873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 43518217 - 43518378
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  43518217 aacacaatcgatcgattgtagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaa 43518316  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43518317 agggtactcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 43518378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 25084928 - 25084855
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25084928 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 25084855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 25142901 - 25142828
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25142901 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 25142828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 38760537 - 38760608
Alignment:
Q  90 aattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38760537 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 38760608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 6469947 - 6470020
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  6469947 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaaggtgcaagtagaaaaactct 6470020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 165
Target Start/End: Original strand, 12189273 - 12189395
Alignment:
Q  43 gttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactag 142  Q
    |||||||||||||||||| |||||||| | ||||||||||||||| |||||||||| |||| |||| || |||||||||| || ||||| ||||||  |     
T  12189273 gttttggggtgtaaccaagaaagaagggagaggttttttgaaaattaaattttatggaagggtaattttatcattttggggtgtaaccaggattaaacaa 12189372  T
Q  143 ggtgcaagtagaaaaactcttta 165  Q
    |||| || |||||||||||||||    
T  12189373 ggtgtaattagaaaaactcttta 12189395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 19617736 - 19617810
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||    
T  19617736 aaattttatgaaagggtaatcttgttattttggggtgcaactatgattaactagggtgcaagtagaaaaactctt 19617810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 8232669 - 8232542
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| ||||||||| || ||| |||||| | ||||||||||||| ||||||||||||||| ||||||| |||||||||| |||||||| ||    
T  8232669 gaagacggattttagggtgtaactaagaaaaaaggaagatgttttttgaaaattaaattttatgaaagggtaatcttatcattttggggtgcaaccagga 8232570  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  || ||| || ||||||||||||    
T  8232569 ttaagcagagtgtaattagaaaaactct 8232542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 40739018 - 40738891
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| ||  ||||||||||| ||||||||||||||| |||| |||||||||| || |||||||| ||    
T  40739018 gaagagggattttagggtgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccagga 40738919  T
Q  135 ttaactagggtgcaagtagaaaaactct 162  Q
    ||||  |||||| || ||||||||||||    
T  40738918 ttaaacagggtgtaattagaaaaactct 40738891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 36294301 - 36294179
Alignment:
Q  41 gggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaact 140  Q
    ||||||||||||||| ||||  ||||||||| |||  |||||||||| |||||||||| |||| |||| ||||||||||||| || ||||||||||||      
T  36294301 gggttttggggtgtagccaaggaagaaggaagaggccttttgaaaattaaattttatggaagggtaattttgtcattttggggtgtaaccatgattaaac 36294202  T
Q  141 agggtgcaagtagaaaaactctt 163  Q
    | |||| || |||||||||||||    
T  36294201 atggtgtaattagaaaaactctt 36294179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 164
Target Start/End: Complemental strand, 18864556 - 18864427
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| ||  ||||| ||||| ||||||||||||||| |||| |||||||||| || |||||||| ||    
T  18864556 gaagagggattttagggtgtaaccaagaaaaaaggaagagtcttttttaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccagga 18864457  T
Q  135 ttaactagggtgcaagtagaaaaactcttt 164  Q
    ||||  |||||| || ||||||||||||||    
T  18864456 ttaaacagggtgtaattagaaaaactcttt 18864427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 37340911 - 37340798
Alignment:
Q  50 ggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaa 149  Q
    ||||||||||||||| |||||| | | ||||||||||| |||||||||| |||||||||  |||||||||||||||||| ||  |||||  |||||| ||    
T  37340911 ggtgtaaccaaaaaaaaaggaagatgctttttgaaaattaaattttatggaaggataattctgtcattttgggatgcaatcagaattaaacagggtgtaa 37340812  T
Q  150 gtagaaaaactctt 163  Q
     |||||||||||||    
T  37340811 ttagaaaaactctt 37340798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 29920362 - 29920290
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||||||| ||||||||| |||||| | |||||||||||||||||||||||| |||||||||||||    
T  29920362 aaattttatgaaagggtaatcttgttattttgaggtgcaaccatgattaactagggtgctagtagaaaaactc 29920290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 10666096 - 10666224
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| |   ||||||||||| |||||||||| |||| |||| ||||||||||||| |||||||| ||    
T  10666096 gaagagggattttagggtgtaaccaagaaaaaaggaagatactttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccagga 10666195  T
Q  135 ttaactagggtgcaagtagaaaaactctt 163  Q
    ||||  |||||| || || ||||||||||    
T  10666196 ttaaacagggtgtaattataaaaactctt 10666224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 41881893 - 41882005
Alignment:
Q  49 gggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgca 148  Q
    |||||||||||| ||| |||||||| | ||||||||||| |||||||||| || | |||| ||||||||||||| ||||||||  |||||  |||||| |    
T  41881893 gggtgtaaccaagaaaaaaggaatatgctttttgaaaattaaattttatggaaaggtaattttgtcattttggggtgcaaccaaaattaaacagggtgta 41881992  T
Q  149 agtagaaaaactc 161  Q
    | |||||||||||    
T  41881993 attagaaaaactc 41882005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 4621255 - 4621145
Alignment:
Q  52 tgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagt 151  Q
    ||||||||| ||| |||||| ||  ||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||| ||||||  | |||| || |    
T  4621255 tgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttatgaaagggtaattttgtcattttaggatgcaaccaggattaaaca-ggtgtaatt 4621157  T
Q  152 agaaaaactctt 163  Q
    ||||||||||||    
T  4621156 agaaaaactctt 4621145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 42437343 - 42437460
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| || ||| | | ||||||||||| |||||||||| |||||||||  |||||||||||| |||||||| ||||||  ||     
T  42437343 ttttagggtgtaaccaagaaaaaatgaagatgctttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacaga 42437442  T
Q  144 gtgcaagtagaaaaactc 161  Q
    ||| || |||||||||||    
T  42437443 gtgtaattagaaaaactc 42437460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 31484761 - 31484649
Alignment:
Q  49 gggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgca 148  Q
    |||||||||||| ||| |||||| | | ||||||||||| |||||||||| |||| |||| ||||||||||||| ||||||||  |||||  ||| || |    
T  31484761 gggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccagaattaaacaggctgta 31484662  T
Q  149 agtagaaaaactc 161  Q
    | |||||||||||    
T  31484661 attagaaaaactc 31484649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 43548584 - 43548668
Alignment:
Q  77 tttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||| |||||||||| |||||||||  |||||||||||| |||||||| ||||||  |||||| || |||||||||||    
T  43548584 tttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaactc 43548668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 138
Target Start/End: Complemental strand, 37105970 - 37105873
Alignment:
Q  40 agggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    |||| ||| ||||||||| |||||| |||||| | ||||||||||||| ||||||||||||||| |||| |||||||||| | |||||| || ||||||    
T  37105970 agggattttgggtgtaacaaaaaaa-aaggaagacgttttttgaaaattaaattttatgaaagggtaattttgtcattttagaatgcaatcaggattaa 37105873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 15272728 - 15272853
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| ||| || | | ||||||||||| |||||||||| ||||||||| ||| |||||||   |||||||| ||    
T  15272728 gaagagggattttagggtgtaaccaagaaaaaagaaagatgctttttgaaaattaaattttatggaaggataattttgacattttgaagtgcaaccagga 15272827  T
Q  135 ttaactagggtgcaagtagaaaaact 160  Q
    ||||  |||||| || ||||||||||    
T  15272828 ttaaacagggtgtaattagaaaaact 15272853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 18522268 - 18522160
Alignment:
Q  54 taaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtag 153  Q
    ||||||| ||| |||||| | ||||||||||||| |||||||||| ||||||||| |||| ||||| || |||||||| |||||| ||  ||| || |||    
T  18522268 taaccaagaaaaaaggaagatgttttttgaaaattaaattttatggaaggataattttgttattttagggtgcaaccaggattaa-taatgtgtaattag 18522170  T
Q  154 aaaaactctt 163  Q
    ||||||||||    
T  18522169 aaaaactctt 18522160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 7338745 - 7338643
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||| ||| ||| |||||| | | ||||||||||| ||||||||||||| | |||| ||||||||||||| |||||||| ||    
T  7338745 gaagagggattttagggtgtaatcaagaaa-aaggaagatgctttttgaaaattaaattttatgaaaaggtaattttgtcattttggggtgcaaccagga 7338647  T
Q  135 ttaa 138  Q
    ||||    
T  7338646 ttaa 7338643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 37274574 - 37274677
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| || ||| | | ||||||||||| |||||||||| |||| |||| ||||||||||||| ||||| || ||    
T  37274574 gaagagggattttagggtgtaaccaagaaaaaatgaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaagcagga 37274673  T
Q  135 ttaa 138  Q
    ||||    
T  37274674 ttaa 37274677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 158
Target Start/End: Complemental strand, 18978567 - 18978453
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagg 143  Q
    |||| |||||||||||| ||| || ||| |   ||||||||||| |||||||||  |||||||||  |||||||||||| |||||||| ||||||  |||    
T  18978567 ttttagggtgtaaccaagaaaaaaagaagatactttttgaaaattaaattttatagaaggataattctgtcattttggggtgcaaccaggattaaacagg 18978468  T
Q  144 gtgcaagtagaaaaa 158  Q
    ||| || ||||||||    
T  18978467 gtgtaattagaaaaa 18978453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 6245313 - 6245188
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| ||  ||||||||||| ||||||||||||||  |||| |||||||| | |  ||||||||  |    
T  6245313 gaagagggattttagggtgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttatgaaagtgtaattttgtcattctagagtgcaaccagaa 6245214  T
Q  135 ttaactagggtgcaagtagaaaaact 160  Q
    ||||  |||||| || ||||||||||    
T  6245213 ttaaacagggtgtaattagaaaaact 6245188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 10552589 - 10552506
Alignment:
Q  77 tttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaact 160  Q
    ||||||||||| |||||||||| ||| ||||| ||||||||||  |||||||||| ||||||  ||| || || ||||||||||    
T  10552589 tttttgaaaattaaattttatggaagaataattttgtcattttaagatgcaaccaggattaatcaggatgtaattagaaaaact 10552506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 35319759 - 35319810
Alignment:
Q  62 aaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgt 113  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||| ||||    
T  35319759 aaagaaggaagagattttttgaaaatcaaattttatgaaagaataattttgt 35319810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 13210948 - 13211051
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| ||   |||| ||||||||||  | |||||||| ||    
T  13210948 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaacagtaattttgtcattttaaggtgcaaccagga 13211047  T
Q  135 ttaa 138  Q
    ||||    
T  13211048 ttaa 13211051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 31498963 - 31498837
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| |||||||| ||| ||| || ||| | | ||||||||||| |||||||||| |||| |||| |||||||||| |  |||||| |  |    
T  31498963 gaagagggattttagggtgtaatcaagaaaaaacgaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttagagtgcaacaagaa 31498864  T
Q  135 ttaactagggtgcaagtagaaaaactc 161  Q
    ||||  |||||| || |||||||||||    
T  31498863 ttaaacagggtgtaattagaaaaactc 31498837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 22859681 - 22859629
Alignment:
Q  162 tttagagaactctaatgcatattacatcatatttcaattataatttataataa 214  Q
    ||||||||||| || |  |||||| |||||||||||||| |||||||||||||    
T  22859681 tttagagaactttactatatattatatcatatttcaattctaatttataataa 22859629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 7e-76; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 13889882 - 13890045
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13889882 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 13889981  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactcttt 164  Q
    ||| ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13889982 agggtaatcttgttattttggggtgcaaccatgattaattagggtgcaagtagaaaaactcttt 13890045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 6625518 - 6625356
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6625518 aacacaatcgatcggttggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 6625419  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  6625418 aggataatcttgtcattttagggtgcaaccatgattaactagggtgtaagtagaaaaactctt 6625356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 6167860 - 6168020
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6167860 aacacaatcgatcgattggagaattatggatttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 6167959  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  6167960 aggttaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactc 6168020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 7141423 - 7141263
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7141423 aacacaatcgatcgattggagaattatggttttggaataagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 7141324  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  7141323 aggataatcttgttattttggggtgcaactatgattaactagggtgcaagtagaaaaactc 7141263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 25335062 - 25335222
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  25335062 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaacaaaaaaagaaggaataagctttttgaaaatcaaattttatgaa 25335161  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  25335162 aggataatcttgtcattttgaggtgcaaccatgattaactagggtgcaagtagaaaaactc 25335222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 29122278 - 29122444
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29122278 aacacaatcgatcgattgaagaattatggttttggaagaagggttttgaggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 29122377  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagg--gtgcaagtagaaaaactcttta 165  Q
    ||| |||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  29122378 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgtgcaagtagaaaaactcttta 29122444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 29630420 - 29630581
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  29630420 aacacaatcgatcgattggagaattatggttttggaagaggggttttggggtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaa 29630519  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  29630520 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtaaaaaaactct 29630581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 18893835 - 18893675
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  18893835 aacacaatcaatcggttggagaattatggttctggaagaagggttttggggtgtaaccaaaaaagaaggaatatgctttttgaaaatcaaattttatgaa 18893736  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  18893735 aggataatcttgtcattttggggtgtaaccatgattaactagggtgcaagtagaaaaactc 18893675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 3094748 - 3094587
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  3094748 aacataatcgatcgattggagaattatggttttggaagagaggttttggggtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaa 3094649  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3094648 agggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 3094587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 7081098 - 7081002
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaacca 131  Q
    ||||| || |||||| ||||||||||||||||||||| ||| |||||||||||||||||||||  ||||||||| || |||||||||| || |||||    
T  7081098 gaagagggattttggagtgtaaccaaaaaagaaggaagaggctttttgaaaatcaaattttatctaaggataattttatcattttggggtgtaacca 7081002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 6925903 - 6925775
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| || |||| || ||||||||| ||| |||||| | | ||||||||||| |||||||||| |||| |||| ||||||||||||| ||||| || ||    
T  6925903 gaagagggattttaggatgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaatcagga 6925804  T
Q  135 ttaactagggtgcaagtagaaaaactctt 163  Q
    ||||  |||||| || |||||||||||||    
T  6925803 ttaaacagggtgtaattagaaaaactctt 6925775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 8811261 - 8811357
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaacca 131  Q
    ||||||||||||||| |||||||||| ||| |||||| | | ||||| |||||||||||||||| ||||||||| || |||||||||| || |||||    
T  8811261 gaagaagggttttggagtgtaaccaagaaaaaaggaagatgctttttcaaaatcaaattttatgtaaggataattttatcattttggggtgtaacca 8811357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 23350466 - 23350353
Alignment:
Q  49 gggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgca 148  Q
    |||||||| ||| ||| |||||| | | ||||||||||| |||||||||| ||||||||| |  |||||||||| |||||||| ||||||  |||||| |    
T  23350466 gggtgtaaacaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggataatttgatcattttggggtgcaaccaggattaaacagggtgta 23350367  T
Q  149 agtagaaaaactct 162  Q
    | ||||||||||||    
T  23350366 attagaaaaactct 23350353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 32173670 - 32173794
Alignment:
Q  36 aagaagggttttggggtgtaaccaaaaaagaaggaatagg-ttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    |||| |||||||||||||||||| | ||| |||||| ||| |||||||||||| ||||||||| ||| | |||| |||||||||||||||| |||||  |    
T  32173670 aagaggggttttggggtgtaaccgagaaa-aaggaagaggcttttttgaaaattaaattttataaaatggtaattttgtcattttgggatgtaaccagaa 32173768  T
Q  135 ttaactagggtgcaagtagaaaaact 160  Q
    ||||  |||||| || ||||||||||    
T  32173769 ttaaacagggtgtaattagaaaaact 32173794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 34085811 - 34085904
Alignment:
Q  44 ttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgatta 137  Q
    |||| |||| ||||||| ||| |||||| | | ||||||||||| |||||||||| ||||||||| ||||||||||||| |||||||| |||||    
T  34085811 ttttagggtataaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggataattttgtcattttggggtgcaaccaggatta 34085904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 18024505 - 18024377
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatga 134  Q
    ||||| ||||||| |||||||||||| |||||||||| | | ||||| ||||| | |||||||||||||  ||| |||||||||| | ||| |||||  |    
T  18024505 gaagaggggttttcgggtgtaaccaagaaagaaggaagaagctttttcaaaattagattttatgaaagggcaattttgtcattttagaatgtaaccagaa 18024406  T
Q  135 ttaactagggtgcaagtagaaaaactctt 163  Q
    ||||  |||||| || |||||||||||||    
T  18024405 ttaaacagggtgtaattagaaaaactctt 18024377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 31091150 - 31091231
Alignment:
Q  82 gaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    |||||| |||||||||| |||| |||| ||||||||||||| |||||||| ||||||  | |||| || |||||||||||||    
T  31091150 gaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaacatggtgtaattagaaaaactctt 31091231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 8525609 - 8525525
Alignment:
Q  77 tttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||| |||||||||| |||| |||| || |||||||||||||||||||  |||||  || ||| || |||||||||||    
T  8525609 tttttgaaaattaaattttatggaagggtaattttatcattttgggatgcaaccagaattaaacagtgtgtaattagaaaaactc 8525525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 11369053 - 11369165
Alignment:
Q  50 ggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaa 149  Q
    ||||||||||| ||| |||||| |   ||||||||||| |||||||||  |||  |||| ||||||||||| | |||||||| ||||||  |||||| ||    
T  11369053 ggtgtaaccaagaaaaaaggaagattctttttgaaaattaaattttatagaagagtaattttgtcattttgaggtgcaaccaagattaaacagggtgtaa 11369152  T
Q  150 gtagaaaaactct 162  Q
     ||||||||||||    
T  11369153 ttagaaaaactct 11369165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 5715003 - 5714918
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttg 120  Q
    ||||| || |||| |||||||||||||| | || ||| | | ||||||||||| ||||||||||||||| |||| |||| ||||||    
T  5715003 gaagagggattttagggtgtaaccaaaagaaaatgaagatgctttttgaaaattaaattttatgaaagggtaattttgttattttg 5714918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 13445401 - 13445463
Alignment:
Q  76 ttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    |||||||||||| |||||||||  |||  |||| |||||||||| ||||||||||| ||||||    
T  13445401 ttttttgaaaattaaattttatagaagagtaattttgtcattttaggatgcaaccaggattaa 13445463  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 29623172 - 29623233
Alignment:
Q  77 tttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    ||||||||||| |||||||||| || |||||| ||||||||||  | |||||||| ||||||    
T  29623172 tttttgaaaattaaattttatggaaagataattttgtcattttaaggtgcaaccaggattaa 29623233  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 17225171 - 17225207
Alignment:
Q  178 gcatattacatcatatttcaattataatttataataa 214  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  17225171 gcatatttcatcatatttcaattatagtttataataa 17225207  T

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Target: scaffold0438 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2039 - 2200
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  2039 aacacaatcgatcgattggagaattatggttttggaagaaggattttggggtgtaaccaaaaaagaaggaatgggctttttgaaaatcaaattttatgaa 2138  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2139 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 2200  T

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Target: scaffold0276 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 12680 - 12520
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12680 aacacaatcgatggattgaagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 12581  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12580 agggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactc 12520  T

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Target: scaffold0276; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 13973 - 14135
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13973 aacacaatcgatggattgaagaattatcgttttggaaaaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 14072  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctt 163  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14073 aggataatcttataattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 14135  T

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Target: scaffold0007 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 157039 - 157199
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  157039 aacacaattgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 157138  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||| |||||||||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  157139 agggtaatcttgtcattttttggtgcaaccatgattaactagggtgcaagtagaaaaactc 157199  T

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Target: scaffold0007; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 200144 - 200056
Alignment:
Q  50 ggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaa 138  Q
    |||||| |||| ||| |||||| | ||||||||||||| |||||||||| |||| |||| |||||||||||||||||| ||| ||||||    
T  200144 ggtgtagccaagaaaaaaggaagatgttttttgaaaattaaattttatggaagggtaattttgtcattttgggatgcatccaggattaa 200056  T

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Target: scaffold0248 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2948 - 3109
Alignment:
Q  1 aacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| ||||||| | ||||||||||||||||||||| ||    
T  2948 aacacaatcgatcgattggagaattatggttttggaagaggggttttggggtgtaaccatgaaaggaggaatatgctttttgaaaatcaaattttataaa 3047  T
Q  101 aggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactct 162  Q
    ||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3048 agggtaatattgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactct 3109  T

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Target: scaffold0065 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 38424 - 38496
Alignment:
Q  89 aaattttatgaaaggataatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactc 161  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  38424 aaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactc 38496  T

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Target: scaffold0896 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 3708 - 3804
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaacca 131  Q
    ||||||||||||||| |||||||||| ||| |||||| | | ||||| |||||||||||||||| ||||||||| || |||||||||| || |||||    
T  3708 gaagaagggttttggagtgtaaccaagaaaaaaggaagatgctttttcaaaatcaaattttatgtaaggataattttatcattttggggtgtaacca 3804  T

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Target: scaffold0578 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 8842 - 8714
Alignment:
Q  37 agaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaaccatgatt 136  Q
    |||||| ||||  ||||||||||| ||| |||||| | | ||||||||||| |||||||||| |||  |||| |||| |||||  |||||||||| ||||    
T  8842 agaaggattttaaggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagagtaattttgttattttaagatgcaaccaggatt 8743  T
Q  137 aactagggtgcaagtagaaaaactcttta 165  Q
    ||  |||||| || |||||||||| ||||    
T  8742 aaacagggtgtaattagaaaaacttttta 8714  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 365809 - 365905
Alignment:
Q  35 gaagaagggttttggggtgtaaccaaaaaagaaggaataggttttttgaaaatcaaattttatgaaaggataatcttgtcattttgggatgcaacca 131  Q
    ||||| || |||| |||||||||||| ||| |||||| | | ||||||||||| |||||||||| || | | || ||||||| ||| | ||||||||    
T  365809 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaaggtcattttgtcatgttgaggtgcaacca 365905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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