View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14776_high_12 (Length: 406)
Name: NF14776_high_12
Description: NF14776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14776_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 1 - 389
Target Start/End: Complemental strand, 33017270 - 33016879
Alignment:
| Q |
1 |
tatagaccaattacaatgtgttatactcctataa---gaggtattgtcaaacagattaaaacctcttctcgccatgtttataactctagagcaagcggct |
97 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33017270 |
tatagaccaattacaatgtgttatactcctataataagaggtattgtcaaacagattaaaacctcttctcgccatgtttataactctagagcaagcggct |
33017171 |
T |
|
| Q |
98 |
tttgtccgaggtagaaccattctcgataatgcgcttgttgcttttgaaataattcactacatgaaatctaaatctcagggctgtattggtgatgtagttc |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33017170 |
tttgtccgaggtagaaccattctcgataatgcgcttgttgcttttgaaataattcactacatgaaatctaaatctcagggctgtattggtgatgtagttc |
33017071 |
T |
|
| Q |
198 |
tgaagcttgacataatcaaaagcttttgatcaagttgatgggcgatacctctcagatgttatgtcaaaggcaggcttctccaatcaatgaataaatggat |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33017070 |
tgaagcttgacataatcaaaagcttttgatcaagttgatgggcgatacctctcagatgttatgtcaaaggcaggcttctccaatcaatgaataaatggat |
33016971 |
T |
|
| Q |
298 |
ttgtttggttatgtgtgacctctgtcaactacaacgtctgcctcaataatgaagcagttggtccgattttccaaatgaagtgccttacctct |
389 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33016970 |
ttgtttggttatgtgtgacctctgtcaactacaacgtctgcctcaataatgaagcagttggtccgattttccaaatgaagtgccttacctct |
33016879 |
T |
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