View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14776_high_18 (Length: 362)
Name: NF14776_high_18
Description: NF14776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14776_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 344; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 2408336 - 2408683
Alignment:
| Q |
1 |
tttcctgcggcatacaatacatcataaatcacacgctagatgattgcaacttacttctaaactaaataaaccaatgagaacagaagcccttacttacatc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2408336 |
tttcctgcggcatacaatacatcataaatcacacgctagatgatttcaacttacttctaaactaaataaaccaatgagaacagaagcccttacttacatc |
2408435 |
T |
|
| Q |
101 |
agttctgaacttaaacggcttaggatttgtgggctttaattttctgtattttacaacttgagaaccagttgttgtcgatgtagatttctgtttcaaggtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2408436 |
agttctgaacttaaacggcttaggatttgtgggctttaattttctgtattttacaacttgagaaccagttgttgtcgatgtagatttctgtttcaaggtc |
2408535 |
T |
|
| Q |
201 |
ataaagattatcaatcaagtaggtgggaagttaaaacaacatcagtgagattctaaactaggccaaaccttatgtatttttccatcctcctgcttgcttt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2408536 |
ataaagattatcaatcaagtaggtgggaagttaaaacaacatcagtgagattctaaactaggccaaaccttatgtatttttccatcctcctgcttgcttt |
2408635 |
T |
|
| Q |
301 |
caagaatgttctttttggaaccgtcattgatggtgcttacatctctgc |
348 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2408636 |
caagaatgttctttttggaaccgtcattgatggtgcttacatctctgc |
2408683 |
T |
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