View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14776_high_25 (Length: 311)

Name: NF14776_high_25
Description: NF14776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14776_high_25
NF14776_high_25
[»] chr1 (1 HSPs)
chr1 (1-294)||(39250694-39250983)


Alignment Details
Target: chr1 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 39250983 - 39250694
Alignment:
Q  1 tcttgttggaacgcatgaagatttagtaaactcctgtaaatgacgcagcaacataaaatgtatcagtgtatctagcttgtttaatttttgtggacaaata 100  Q
    ||||||||||||| ||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39250983 tcttgttggaacgaatgaaaatttagaaaactcccgtaaatgacgtagcaacataaaatgtatcagtgtatctagcttgtttaatttttgtggacaaata 39250884  T
Q  101 aatagcacctgattttctattatatcttgtttatcttttctcttacttcaaacctaaattatatatcagaagtgtttgttagtaagtaataactcattcc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39250883 aatagcacctgattttctattatatcttgtttatcttttctcttacttcaaacctaaattatatatcagaagtgtttgttagtaagtaataactcattcc 39250784  T
Q  201 atctatgctcaatagagcacaattggtgaaagtaaaaagctctccaacatgatcaatcaatcggacacaaaatttgacatcaacaccggatata 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||||||||||||||||||||    
T  39250783 atctatgctcaatagagcacaattggtgaaagtaaaaagctctccaaaatg----atcaatcggacacaaaatttgacatcaacaccggatata 39250694  T

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