View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14776_low_12 (Length: 415)

Name: NF14776_low_12
Description: NF14776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14776_low_12
NF14776_low_12
[»] chr3 (48 HSPs)
chr3 (154-400)||(31206889-31207126)
chr3 (13-97)||(31206753-31206837)
chr3 (14-84)||(35074042-35074112)
chr3 (15-97)||(54233389-54233471)
chr3 (14-91)||(43441777-43441854)
chr3 (13-97)||(23906873-23906957)
chr3 (21-97)||(28263646-28263722)
chr3 (21-97)||(41877789-41877865)
chr3 (21-97)||(50279981-50280057)
chr3 (21-97)||(52453986-52454062)
chr3 (21-96)||(34021357-34021432)
chr3 (15-97)||(12044642-12044724)
chr3 (23-97)||(35756081-35756155)
chr3 (21-97)||(13159762-13159838)
chr3 (21-97)||(36819057-36819133)
chr3 (21-96)||(11327210-11327285)
chr3 (21-90)||(50879703-50879772)
chr3 (21-97)||(9582053-9582129)
chr3 (21-89)||(30633708-30633776)
chr3 (21-97)||(32931812-32931888)
chr3 (21-97)||(53102796-53102872)
chr3 (23-97)||(30400052-30400126)
chr3 (21-91)||(44855358-44855428)
chr3 (21-91)||(46344521-46344591)
chr3 (15-97)||(50652489-50652571)
chr3 (15-97)||(53932279-53932361)
chr3 (21-90)||(14992183-14992252)
chr3 (45-97)||(1031345-1031397)
chr3 (15-83)||(1208060-1208128)
chr3 (21-97)||(20714344-20714420)
chr3 (21-97)||(40478181-40478257)
chr3 (21-97)||(45295633-45295709)
chr3 (16-96)||(47509037-47509116)
chr3 (16-91)||(47056414-47056489)
chr3 (16-91)||(51717548-51717623)
chr3 (21-91)||(40558895-40558965)
chr3 (14-64)||(42424365-42424414)
chr3 (21-82)||(8254143-8254204)
chr3 (5-97)||(27937065-27937158)
chr3 (21-97)||(42718222-42718296)
chr3 (23-91)||(2009761-2009828)
chr3 (21-97)||(3957912-3957988)
chr3 (31-91)||(23163049-23163109)
chr3 (15-91)||(23628884-23628960)
chr3 (16-96)||(26668942-26669021)
chr3 (31-91)||(43900879-43900939)
chr3 (57-97)||(50146578-50146618)
chr3 (13-49)||(50146614-50146650)
[»] chr8 (35 HSPs)
chr8 (15-91)||(5924917-5924993)
chr8 (15-91)||(5925162-5925238)
chr8 (7-91)||(7129640-7129723)
chr8 (17-97)||(37562031-37562111)
chr8 (21-97)||(14228794-14228870)
chr8 (21-97)||(30927825-30927901)
chr8 (14-97)||(2597047-2597130)
chr8 (19-91)||(30129516-30129588)
chr8 (21-97)||(41273616-41273692)
chr8 (13-91)||(10344435-10344513)
chr8 (13-91)||(11139003-11139081)
chr8 (14-97)||(28623010-28623095)
chr8 (14-96)||(36497763-36497845)
chr8 (21-97)||(41293616-41293691)
chr8 (21-96)||(37568506-37568581)
chr8 (21-96)||(43602317-43602392)
chr8 (21-91)||(11089684-11089754)
chr8 (14-83)||(37343492-37343561)
chr8 (21-97)||(19723100-19723176)
chr8 (21-97)||(36593680-36593756)
chr8 (21-97)||(43587742-43587818)
chr8 (15-86)||(8074614-8074684)
chr8 (23-97)||(6825173-6825247)
chr8 (45-91)||(6849179-6849225)
chr8 (23-97)||(14531722-14531796)
chr8 (14-96)||(27631049-27631130)
chr8 (19-97)||(34765742-34765820)
chr8 (21-91)||(34972172-34972242)
chr8 (28-97)||(6105336-6105405)
chr8 (21-97)||(1065518-1065594)
chr8 (21-97)||(20288634-20288710)
chr8 (21-97)||(21075263-21075339)
chr8 (57-97)||(32185596-32185636)
chr8 (21-97)||(38504271-38504347)
chr8 (21-97)||(39258949-39259025)
[»] chr6 (25 HSPs)
chr6 (13-91)||(33491845-33491923)
chr6 (14-97)||(1803970-1804053)
chr6 (21-91)||(27334971-27335041)
chr6 (21-91)||(27395711-27395781)
chr6 (21-91)||(2862179-2862249)
chr6 (21-91)||(2881440-2881510)
chr6 (21-97)||(3660247-3660323)
chr6 (13-97)||(11017483-11017567)
chr6 (21-97)||(15328590-15328666)
chr6 (21-97)||(28965734-28965810)
chr6 (21-96)||(3339393-3339468)
chr6 (14-97)||(7693416-7693498)
chr6 (15-97)||(6435137-6435219)
chr6 (13-97)||(17417120-17417205)
chr6 (21-97)||(2056884-2056960)
chr6 (21-97)||(15364760-15364836)
chr6 (33-97)||(17835713-17835777)
chr6 (21-97)||(25924758-25924834)
chr6 (13-97)||(30622125-30622208)
chr6 (21-91)||(237292-237362)
chr6 (15-97)||(12441628-12441710)
chr6 (13-87)||(19788963-19789036)
chr6 (13-87)||(28647322-28647395)
chr6 (14-96)||(30795983-30796064)
chr6 (21-97)||(17902586-17902662)
[»] chr2 (36 HSPs)
chr2 (15-97)||(36909732-36909813)
chr2 (14-97)||(10466075-10466158)
chr2 (13-97)||(10550345-10550429)
chr2 (21-97)||(37966457-37966533)
chr2 (21-97)||(6885011-6885087)
chr2 (21-97)||(23047977-23048053)
chr2 (21-97)||(27307139-27307215)
chr2 (21-97)||(36582357-36582433)
chr2 (15-91)||(44018137-44018213)
chr2 (21-97)||(44484550-44484626)
chr2 (15-54)||(42678688-42678727)
chr2 (21-91)||(3195981-3196051)
chr2 (15-97)||(30973879-30973961)
chr2 (16-97)||(17826148-17826229)
chr2 (13-97)||(31847632-31847717)
chr2 (21-97)||(29871249-29871325)
chr2 (15-97)||(5962739-5962821)
chr2 (31-97)||(33857318-33857384)
chr2 (16-90)||(38572047-38572121)
chr2 (28-97)||(36383563-36383632)
chr2 (15-91)||(2308213-2308288)
chr2 (21-97)||(10688042-10688118)
chr2 (21-97)||(30413626-30413702)
chr2 (21-97)||(38246645-38246721)
chr2 (13-96)||(29192536-29192618)
chr2 (14-96)||(3585728-3585810)
chr2 (15-97)||(12192048-12192130)
chr2 (19-97)||(12358414-12358492)
chr2 (21-91)||(23391169-23391239)
chr2 (154-188)||(39309976-39310010)
chr2 (28-97)||(28301963-28302032)
chr2 (21-86)||(33029996-33030061)
chr2 (15-96)||(39744483-39744563)
chr2 (13-49)||(14954497-14954533)
chr2 (42-86)||(29168837-29168881)
chr2 (8-96)||(42665694-42665781)
[»] chr1 (40 HSPs)
chr1 (15-97)||(26547335-26547417)
chr1 (14-91)||(34395807-34395884)
chr1 (15-91)||(51193021-51193097)
chr1 (18-97)||(7078391-7078470)
chr1 (21-91)||(50035432-50035502)
chr1 (21-97)||(7371842-7371918)
chr1 (14-97)||(25130804-25130887)
chr1 (19-97)||(11097776-11097854)
chr1 (15-97)||(48871843-48871925)
chr1 (21-97)||(26501396-26501472)
chr1 (15-91)||(33660152-33660227)
chr1 (13-97)||(42843230-42843314)
chr1 (14-97)||(30530287-30530369)
chr1 (31-97)||(19920863-19920929)
chr1 (14-86)||(5315323-5315394)
chr1 (21-97)||(13813659-13813735)
chr1 (37-97)||(25995561-25995621)
chr1 (13-97)||(30196813-30196897)
chr1 (15-91)||(43457708-43457783)
chr1 (10-97)||(9011746-9011833)
chr1 (14-97)||(29489246-29489329)
chr1 (21-91)||(6829679-6829749)
chr1 (14-96)||(8934422-8934503)
chr1 (15-97)||(34002209-34002290)
chr1 (21-97)||(10385515-10385591)
chr1 (21-97)||(27578283-27578359)
chr1 (42-86)||(39669918-39669962)
chr1 (21-97)||(49189105-49189181)
chr1 (16-96)||(50777312-50777392)
chr1 (14-89)||(7420743-7420818)
chr1 (28-91)||(36669271-36669334)
chr1 (14-48)||(11812497-11812531)
chr1 (14-91)||(46902709-46902787)
chr1 (14-91)||(3291312-3291389)
chr1 (21-74)||(5383883-5383936)
chr1 (15-56)||(5959518-5959559)
chr1 (15-64)||(21154357-21154405)
chr1 (57-97)||(29362622-29362662)
chr1 (45-97)||(34941838-34941890)
chr1 (45-97)||(51168686-51168738)
[»] chr4 (46 HSPs)
chr4 (8-97)||(2193690-2193779)
chr4 (15-97)||(19720529-19720611)
chr4 (15-97)||(32365555-32365637)
chr4 (12-97)||(20632533-20632618)
chr4 (21-97)||(8026658-8026734)
chr4 (21-97)||(24235421-24235497)
chr4 (21-97)||(44368096-44368172)
chr4 (14-97)||(13267366-13267448)
chr4 (14-97)||(32079210-32079293)
chr4 (15-97)||(15638231-15638313)
chr4 (22-96)||(31833117-31833191)
chr4 (21-97)||(5208221-5208297)
chr4 (21-97)||(9032881-9032957)
chr4 (21-97)||(27001303-27001379)
chr4 (13-97)||(33483992-33484076)
chr4 (21-97)||(47106012-47106088)
chr4 (21-97)||(53662336-53662412)
chr4 (14-97)||(18568702-18568785)
chr4 (13-87)||(11012236-11012309)
chr4 (15-96)||(20056484-20056565)
chr4 (21-97)||(3223090-3223166)
chr4 (21-97)||(51377187-51377263)
chr4 (18-97)||(36728513-36728592)
chr4 (42-97)||(46480421-46480476)
chr4 (21-91)||(1796472-1796541)
chr4 (15-97)||(15515885-15515967)
chr4 (15-96)||(22920159-22920240)
chr4 (15-96)||(22971559-22971640)
chr4 (13-97)||(32901430-32901514)
chr4 (21-97)||(37022362-37022438)
chr4 (21-97)||(51224732-51224808)
chr4 (21-97)||(56025357-56025433)
chr4 (13-96)||(4514152-4514234)
chr4 (13-96)||(13182433-13182516)
chr4 (14-97)||(35824006-35824088)
chr4 (13-48)||(40721862-40721897)
chr4 (18-97)||(41495114-41495193)
chr4 (159-197)||(13252527-13252565)
chr4 (13-91)||(34259933-34260011)
chr4 (23-97)||(53384238-53384311)
chr4 (14-91)||(42177937-42178014)
chr4 (21-97)||(4550435-4550511)
chr4 (12-96)||(10096628-10096711)
chr4 (21-97)||(31221514-31221590)
chr4 (45-97)||(33860464-33860516)
chr4 (57-97)||(49424750-49424790)
[»] chr5 (32 HSPs)
chr5 (14-97)||(14914471-14914553)
chr5 (28-97)||(12401293-12401362)
chr5 (14-97)||(17489449-17489532)
chr5 (14-87)||(18638729-18638801)
chr5 (21-97)||(9594579-9594655)
chr5 (21-97)||(15622145-15622221)
chr5 (21-97)||(30574271-30574347)
chr5 (21-97)||(33823588-33823664)
chr5 (14-97)||(8959261-8959344)
chr5 (21-96)||(15917920-15917995)
chr5 (21-91)||(3263402-3263472)
chr5 (13-91)||(4292890-4292968)
chr5 (21-91)||(7077233-7077303)
chr5 (21-97)||(12512894-12512970)
chr5 (14-97)||(41984168-41984251)
chr5 (21-97)||(9596708-9596784)
chr5 (21-97)||(11464017-11464093)
chr5 (21-97)||(22920386-22920462)
chr5 (44-87)||(8725333-8725376)
chr5 (21-96)||(25345440-25345515)
chr5 (21-84)||(36548274-36548337)
chr5 (15-97)||(3722965-3723046)
chr5 (15-53)||(14070499-14070537)
chr5 (21-91)||(16143604-16143674)
chr5 (14-96)||(16292138-16292219)
chr5 (21-91)||(32634815-32634885)
chr5 (14-55)||(14648021-14648062)
chr5 (15-87)||(3155113-3155184)
chr5 (45-97)||(5698246-5698298)
chr5 (21-97)||(19271960-19272036)
chr5 (45-97)||(26626737-26626789)
chr5 (21-97)||(38010973-38011049)
[»] chr7 (29 HSPs)
chr7 (14-96)||(37385120-37385202)
chr7 (13-97)||(10014841-10014925)
chr7 (21-97)||(26041411-26041487)
chr7 (21-97)||(30864311-30864387)
chr7 (21-97)||(44511240-44511316)
chr7 (14-96)||(37149362-37149444)
chr7 (15-97)||(42431824-42431906)
chr7 (21-97)||(27164731-27164807)
chr7 (14-97)||(8742484-8742567)
chr7 (21-96)||(33050285-33050360)
chr7 (15-91)||(1838347-1838423)
chr7 (13-97)||(17500798-17500881)
chr7 (13-97)||(17552333-17552416)
chr7 (15-87)||(49089053-49089124)
chr7 (31-97)||(39369403-39369469)
chr7 (14-91)||(8326232-8326309)
chr7 (57-97)||(1790092-1790132)
chr7 (21-97)||(2346953-2347029)
chr7 (21-97)||(38978593-38978668)
chr7 (21-97)||(48057391-48057467)
chr7 (15-49)||(1790128-1790162)
chr7 (23-92)||(19880127-19880197)
chr7 (15-97)||(25614709-25614791)
chr7 (21-91)||(30201366-30201436)
chr7 (13-91)||(42476454-42476532)
chr7 (21-97)||(116732-116808)
chr7 (21-97)||(17157234-17157310)
chr7 (21-97)||(42060758-42060834)
chr7 (21-85)||(47530185-47530249)
[»] scaffold0514 (1 HSPs)
scaffold0514 (21-97)||(1390-1466)
[»] scaffold0172 (1 HSPs)
scaffold0172 (21-97)||(17076-17152)
[»] scaffold0003 (1 HSPs)
scaffold0003 (21-97)||(88909-88985)
[»] scaffold0002 (1 HSPs)
scaffold0002 (21-97)||(147150-147226)
[»] scaffold0004 (1 HSPs)
scaffold0004 (21-97)||(249036-249112)
[»] scaffold0618 (1 HSPs)
scaffold0618 (21-91)||(3468-3538)
[»] scaffold0576 (1 HSPs)
scaffold0576 (21-97)||(9531-9607)
[»] scaffold0193 (1 HSPs)
scaffold0193 (22-97)||(24774-24849)
[»] scaffold0121 (1 HSPs)
scaffold0121 (21-84)||(29897-29960)
[»] scaffold0085 (1 HSPs)
scaffold0085 (21-91)||(31194-31264)
[»] scaffold0020 (1 HSPs)
scaffold0020 (14-96)||(156008-156089)
[»] scaffold0238 (1 HSPs)
scaffold0238 (14-87)||(16502-16574)
[»] scaffold0332 (1 HSPs)
scaffold0332 (13-53)||(660-700)
[»] scaffold0011 (1 HSPs)
scaffold0011 (21-97)||(18696-18771)


Alignment Details
Target: chr3 (Bit Score: 174; Significance: 2e-93; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 154 - 400
Target Start/End: Original strand, 31206889 - 31207126
Alignment:
Q  154 ttgttacaaaatgattatataaatatcatttctcaatgagatataagccactaaaaataagctataaatttgtgtgagaaaaaattgctatcaaacaaat 253  Q
    |||| ||||||||||| || ||||||||||||| ||| |||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31206889 ttgtcacaaaatgattgtacaaatatcatttctgaataagatataagctagtaaaaataagttataaatttgtgtgagaaaaaattgctatcaaacaaat 31206988  T
Q  254 ctttttctatcgtataaacttaaaagctaccagttctaaatctgtcttttgccaaactccccatgaatgcaaatccaacttctccaagtttgtccccact 353  Q
    ||||||||||||||||||||        || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31206989 ctttttctatcgtataaact--------acaagttctaaatctgtcttt-gccaaactccccatgaatgcaaatccaacttctccaagtttgtccccact 31207079  T
Q  354 tagggaaataagtcaaacaaacatcacaaaagccaattcgtcctatg 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31207080 tagggaaataagtcaaacaaacatcacaaaagccaattcgtcctatg 31207126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 31206753 - 31206837
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  31206753 tagagtagtgatatatgtacatcaattttatgacaactttgattacaaccttatttttctctttttttattggtaaaaatcaatg 31206837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 35074042 - 35074112
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattg 84  Q
    ||||||||||||||| |||||| |||| ||| |||||||||| ||||| ||||||||||||||||||||||    
T  35074042 agagtagtgatatatatacatctattttatggcaactttgatgacaaccttatttttctcttttcttattg 35074112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 54233389 - 54233471
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||| |||||||||| || |||||||||||| | ||||| || ||||||||| |||||||||||||||| |||||    
T  54233389 gagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 54233471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 43441854 - 43441777
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    ||||||||||||| |||||||||| || |||||||||||||  ||||| ||| ||||||||||| |||||||||||||    
T  43441854 agagtagtgatatttgtacatccaattgatgacaactttgacgacaaccttacttttctctttttttattggtcaaaa 43441777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 23906873 - 23906957
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||| |||||||||| || |||||||||||| | ||||| ||  |||||||| |||||||||||||||| |||||    
T  23906873 tagagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaaacaatg 23906957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 28263722 - 28263646
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||| |||||||||||||||||||||  | |||||||||||||||| | |||||||||||||||| |||||    
T  28263722 tgatatttgttcatccatttcatgacaactttagtgacaactttatttttctttcttcttattggtcaaaaacaatg 28263646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 41877865 - 41877789
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| |||||||||||| | ||||||||||| |||||    
T  41877865 tgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctcttttttgattggtcaaaaacaatg 41877789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 50279981 - 50280057
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||||||||||||||| || ||||| || ||||||||| |||||||| ||||||| |||||    
T  50279981 tgatatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctcttcttatttgtcaaaaacaatg 50280057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 52453986 - 52454062
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||||||||||||||||  | |||||||| ||| ||||| |||||||||||||||| |||||    
T  52453986 tgatatttgtacatccatttcatgacaactttagtgacaactttgtttctctctcttcttattggtcaaaaacaatg 52454062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 34021357 - 34021432
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||| |||||||||||| ||||||||||||  | |||||||| ||||||||| |||||||||||||||| ||||    
T  34021357 tgatatttgtacatccattccatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaat 34021432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 12044642 - 12044724
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||| |||||||||| || |||||||||||||| ||||| ||| |||| ||| ||||||||| |||||| |||||    
T  12044642 gagtagtgatatttgtacatccaattgatgacaactttgatgacaaccttacttttttctcttcttattgatcaaaaacaatg 12044724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 35756155 - 35756081
Alignment:
Q  23 atatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||| |||||||| ||||||||||||||||| | |||||||| ||||||||| ||||||||||| |||| |||||    
T  35756155 atatttgtacatctatttcatgacaactttggtgacaactttgtttttctctcttcttattggttaaaaacaatg 35756081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 13159838 - 13159762
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  13159838 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 13159762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 36819133 - 36819057
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  36819133 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 36819057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 11327285 - 11327210
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||| |||||||||||||||||||||||||  | ||||| || ||| ||||| |||||||||||||||| ||||    
T  11327285 tgatatttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaat 11327210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 50879772 - 50879703
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaa 90  Q
    |||||| |||||||||||| ||||||||||||  | |||||||| || |||||| |||||||||||||||    
T  50879772 tgatatttgtacatccattccatgacaactttagtgacaactttgttgttctctcttcttattggtcaaa 50879703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 9582053 - 9582129
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||  |||||||||||| |||||| ||||| ||||||||| || ||||||||||| |||| |||||    
T  9582053 tgatatgtgtacatatatttcatgacaattttgatgacaaccttatttttcactcttcttattggttaaaaacaatg 9582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 30633708 - 30633776
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaa 89  Q
    |||||| |||||||| |||| |||| |||||| || ||||| |||||||||||| ||||||||||||||    
T  30633708 tgatatttgtacatctattttatgataactttaatgacaaccttatttttctctcttcttattggtcaa 30633776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 32931812 - 32931888
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||||||  ||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  32931812 tgatatttgtacatccatttcacaacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 32931888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 53102796 - 53102872
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| ||||||||| |||||| |||||    
T  53102796 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatg 53102872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 30400052 - 30400126
Alignment:
Q  23 atatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||| |||||||||||| ||||||||||||  | ||||  || ||||||||| |||||||||||||||| |||||    
T  30400052 atatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatg 30400126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 44855428 - 44855358
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| |||||||| ||||||||||||||||  | ||||  |||||||||||| ||||||||||| ||||    
T  44855428 tgatatttgtacatcaatttcatgacaactttagtgacaatcttatttttctctcttcttattggttaaaa 44855358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 46344591 - 46344521
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| ||||||| ||||||| |||||||||  | ||||| |||||||||| | ||||||||||||||||    
T  46344591 tgatatttgtacattcatttcacgacaactttagtgacaaccttatttttctttcttcttattggtcaaaa 46344521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 50652571 - 50652489
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||| |||||||  | || ||||||| |||||| |||| |||  |||||||| |||||||||||||||| |||||    
T  50652571 gagtagtgatatttgtacatttaattgatgacaattttgatgacaattttgcttttctctcttcttattggtcaaaaacaatg 50652489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 53932279 - 53932361
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||| |||||||||| || |||||||||||| | ||||| ||  |||||| | |||||||| ||||||| |||||    
T  53932279 gagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatcttcttattagtcaaaaacaatg 53932361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 14992252 - 14992183
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaa 90  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| ||||  |||||| | ||||||||||    
T  14992252 tgatatttgtacatccatttaatgacaactttggtgacaactttgttttattcttttttgattggtcaaa 14992183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 1031345 - 1031397
Alignment:
Q  45 acaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| || |||||||||||||||| | |||||||||||||||| |||||    
T  1031345 acaacttttatgacaactttatttttctttcttcttattggtcaaaaacaatg 1031397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 1208128 - 1208060
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttatt 83  Q
    |||||||||||| |||||||||| || ||| |||||||| | ||||||||  |||||||| ||||||||    
T  1208128 gagtagtgatatttgtacatccaattgatgtcaactttggtgacaactttgattttctctcttcttatt 1208060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 20714420 - 20714344
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||| || |||  | ||||| |||||||||| | |||||||||||||||| |||||    
T  20714420 tgatatttgtacatccattccatgataattttagtgacaaccttatttttctatcttcttattggtcaaaaacaatg 20714344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 40478181 - 40478257
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| ||||||| |||| | |||||||| |||| |||| || | ||||||||||| |||||    
T  40478181 tgatatttgtacatccatttaatgacaattttggtgacaactttgttttcctctcttttgattggtcaaaaacaatg 40478257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 45295633 - 45295709
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| |||||| ||||| | |||||||| |||| |||| || | ||||||||||| |||||    
T  45295633 tgatatttgtacatccatttaatgacagctttggtgacaactttgttttcctctcttttgattggtcaaaaacaatg 45295709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 47509037 - 47509116
Alignment:
Q  16 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||||||||||||||| |||||| || ||||||||||| |||| |||  |||  |||||||||||||||| ||| ||||    
T  47509037 agtagtgatatatgtacaaccatttgat-acaactttgatgacaatttttatttgttcttttcttattggtccaaaacaat 47509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 47056414 - 47056489
Alignment:
Q  16 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||| |||||| |||||||||| || ||||||| |||||| ||||| ||| |||||||| ||  ||||||||||||    
T  47056414 agtaatgatatttgtacatccagttgatgacaattttgatgacaaccttacttttctctctttctattggtcaaaa 47056489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 51717623 - 51717548
Alignment:
Q  16 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    ||||||||||| |||||||||| || |||||||||||| | ||||| ||  |||||||| ||||| ||||| ||||    
T  51717623 agtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttgttggtaaaaa 51717548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 40558895 - 40558965
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| ||||||| |||| ||| ||||||||  | ||||| |||||||||||| ||||||||| ||||||    
T  40558895 tgatatttgtacattcattccataacaactttagtgacaaccttatttttctctcttcttattgatcaaaa 40558965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 42424414 - 42424365
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaacttt 64  Q
    |||||||||||||||||||||||||||  | ||||||||||| ||||||||    
T  42424414 agagtagtgatatatgtacatccatttggt-acaactttgatgacaacttt 42424365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 8254204 - 8254143
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttat 82  Q
    |||||| ||||||||||||||||||||| |||  | ||||| |||||| ||||| |||||||    
T  8254204 tgatatttgtacatccatttcatgacaattttagtgacaacattatttctctctcttcttat 8254143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 27937158 - 27937065
Alignment:
Q  5 ttataaacta-gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||| ||||| |||||| |||||||| | || |||||||||||||| ||||| ||  |||| | | || ||||||||||||| |||||    
T  27937158 ttataaactaagagtaatgatatttgtacatctaattgatgacaactttgatgacaaccttgcttttttatctttttattggtcaaaaacaatg 27937065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 42718296 - 42718222
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||| ||||| ||||||| |||| | |||||||| ||| |||||||  | ||||||||||| |||||    
T  42718296 tgatatatgtacattcatttaatgacaattttggtgacaactttgtttctctcttt--tgattggtcaaaaacaatg 42718222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 2009828 - 2009761
Alignment:
Q  23 atatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||| |||||||| |||| |||||||||||| | ||||| ||  |||||||| ||||||||||||||||    
T  2009828 atatttgtacatcaattt-atgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaa 2009761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 3957912 - 3957988
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| || |||||||||  | ||||| || ||||||| | |||||||| ||||||| |||||    
T  3957912 tgatatttgtacatccattccaggacaactttagtgacaaccttgtttttctatcttcttatttgtcaaaaacaatg 3957988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 23163049 - 23163109
Alignment:
Q  31 acatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    ||||| ||| |||||||| |||  | |||| ||| ||||||||||||||||||||||||||    
T  23163049 acatcaattccatgacaattttagtgacaattttgtttttctcttttcttattggtcaaaa 23163109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 23628884 - 23628960
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    ||||||||||||||||| |||||||| | || ||||||||| || |  || ||||| ||| || |||||||||||||    
T  23628884 gagtagtgatatatgtaaatccatttaaagataactttgatgactatcttgtttttttctctttttattggtcaaaa 23628960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 26669021 - 26668942
Alignment:
Q  16 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||||||||||||||| |||||| | ||||||| |||| ||||||||  ||||||| ||| | ||||||| ||| ||||    
T  26669021 agtagtgatatatgtacaaccattt-aggacaactatgatgacaactttcattttctcatttttcattggtccaaaacaat 26668942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 43900939 - 43900879
Alignment:
Q  31 acatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||||| | |||||||||  | |||||||| ||||||||| ||||||||||| ||||    
T  43900939 acatccatttaaggacaactttagtgacaactttgtttttctctcttcttattggttaaaa 43900879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 50146618 - 50146578
Alignment:
Q  57 acaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||| |||| |||||||||| |||||||||||||||||||    
T  50146618 acaaccttatgtttctctttttttattggtcaaaatcaatg 50146578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 50146650 - 50146614
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaac 49  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  50146650 tagagcagtgatatatgtacatcaatttcatgacaac 50146614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 5924993 - 5924917
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||| ||||||||||||||||    
T  5924993 gagtagtgatatatgtacatccatttgatgacaactttcatgacaaccttatttttctctcttcttattggtcaaaa 5924917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 5925238 - 5925162
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||| ||||||||||||||||    
T  5925238 gagtagtgatatatgtacatccatttgatgacaacttttatgacaaccttatttttctctattcttattggtcaaaa 5925162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 7129723 - 7129640
Alignment:
Q  7 ataaactagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    ||||| |||||||||||||| ||||||| |||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  7129723 ataaaatagagtagtgatatttgtacattcatttcat-acaactttgatgacaactttgtttttctctcttcttattggtcaaaa 7129640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 37562031 - 37562111
Alignment:
Q  17 gtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||| |||||||||| || |||||||||||||| ||||| || ||||||||| |||||||||||||||| |||||    
T  37562031 gtagtgatatttgtacatccaattgatgacaactttgatgacaaccttgtttttctctcttcttattggtcaaaaacaatg 37562111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 14228870 - 14228794
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||||||||| || |||  | |||| |||||||||||||||| ||||||||||||| |||||    
T  14228870 tgatatatgtacatccatttcatgataattttagtgacaattttatttttctctttttttattggtcaaaaacaatg 14228794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 30927825 - 30927901
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||||||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  30927825 tgatatttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 30927901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 2597047 - 2597130
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||| ||||||| || || |||||||||||| | ||||| || ||||||||| |||||||||||||||| |||||    
T  2597047 agagtagtgatatttgtacattcaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 2597130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 30129588 - 30129516
Alignment:
Q  19 agtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||| |||||||||| || |||||||||||| | ||||||||  |||||||| ||||||||||||||||    
T  30129588 agtgatatttgtacatccaattgatgacaactttggtgacaactttgcttttctctcttcttattggtcaaaa 30129516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 41273692 - 41273616
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  41273692 tgatatttgtacatccattccatgacaactttagtaacaaccttgtttttctctcttcttattggtcaaaaacaatg 41273616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 10344513 - 10344435
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    ||||||||||||||||||||||| |||| || |||||||| || ||||| || ||||||| | || |||||||||||||    
T  10344513 tagagtagtgatatatgtacatctatttgataacaacttttatgacaaccttgtttttctttctttttattggtcaaaa 10344435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 11139081 - 11139003
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||||||||| |||||||| | || |||||||||||| | |||||||| ||||||| | || |||||||||||||    
T  11139081 tagagtagtgatatttgtacatcaaattgatgacaactttggtgacaactttgtttttctatctttttattggtcaaaa 11139003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 28623010 - 28623095
Alignment:
Q  14 agagtagtgatatatgtacatccatt--tcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||| |||||||||| |  | |||||||||||| | ||||| ||  ||||||||||||||||||||||||| |||||    
T  28623010 agagtagtgatatttgtacatccaatattgatgacaactttggtgacaaccttgcttttctcttttcttattggtcaaaaacaatg 28623095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 36497845 - 36497763
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    ||||||||||||| |||||||| | || |||||||||||||| ||||| || ||||||||| || |||||||| |||| ||||    
T  36497845 agagtagtgatatttgtacatctaattgatgacaactttgataacaaccttgtttttctctctttttattggttaaaaacaat 36497763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 41293616 - 41293691
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  41293616 tgatatttgtacatccattccatgacaactttagtgacaac-ttgtttttctctcttcttattggtcaaaaacaatg 41293691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 37568506 - 37568581
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||| |||||||||||||||| | ||||||  | ||||| || ||||||| |||||||||||||||||| ||||    
T  37568506 tgatatttgtacatccatttcattataactttagtgacaacattgtttttcttttttcttattggtcaaaaacaat 37568581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 43602317 - 43602392
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| ||| ||||| || | ||||||||||| ||||    
T  43602317 tgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttttgattggtcaaaaacaat 43602392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 11089754 - 11089684
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| ||||||||||||| ||||||| |||| | |||||||| |||||||||||| | |||||| ||||    
T  11089754 tgatatttgtacatccatttaatgacaattttggtgacaactttgtttttctcttttttgattggttaaaa 11089684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 37343561 - 37343492
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttatt 83  Q
    ||||||||||||| |||||||||| || |||| ||||||| | ||||| ||  |||||||||||||||||    
T  37343561 agagtagtgatatttgtacatccaattgatgataactttggtgacaaccttgattttctcttttcttatt 37343492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 19723100 - 19723176
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||| || |||||||||||||  | ||||| || ||||||||| |||||||| ||||||| |||||    
T  19723100 tgatatttgtacatctatatcatgacaactttagtgacaaccttgtttttctctcttcttattagtcaaaaacaatg 19723176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 36593680 - 36593756
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||| | ||||| |||||    
T  36593680 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattagccaaaaacaatg 36593756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 43587818 - 43587742
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||| |||||||| |||||||||||| | |||||||| ||||||||| || | |||||| |||| |||||    
T  43587818 tgatatttgtatatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtaaaaagcaatg 43587742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 8074614 - 8074684
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggt 86  Q
    |||||||||||||||||||  ||| |  ||||||||||||| ||||||||  |||||||| |||||||||||    
T  8074614 gagtagtgatatatgtacaatcatatt-tgacaactttgatgacaactttcattttctctcttcttattggt 8074684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 6825173 - 6825247
Alignment:
Q  23 atatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||| |||||||| ||||  ||||||||||| |  |||| |||||||||||| ||||||||||| |||| |||||    
T  6825173 atatttgtacatctatttattgacaactttggtgtcaaccttatttttctctcttcttattggttaaaaacaatg 6825247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 6849179 - 6849225
Alignment:
Q  45 acaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||| || |||||||| |||||||||||| |||||||||||||    
T  6849179 acaacttttatgacaactttctttttctctttttttattggtcaaaa 6849225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 14531796 - 14531722
Alignment:
Q  23 atatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||| |||||||| || |||||||||| || || ||||| |||||||||||| ||||||||| || ||| |||||    
T  14531796 atatttgtacatctatctcatgacaacattaatgacaaccttatttttctctcttcttattgatctaaaacaatg 14531722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 27631130 - 27631049
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||||||||||||||||| |||||   ||||||||||||| |||||| |  |||||||| || | ||||||||||| ||||    
T  27631130 agagtagtgatatatgtacaaccattgg-tgacaactttgatgacaactattattttctctcttttcattggtcaaaaacaat 27631049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 34765742 - 34765820
Alignment:
Q  19 agtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| |||||||| | || ||||||| |||  | ||||| ||| ||||||||||| ||||||||||||| |||||    
T  34765742 agtgatatttgtacatctaattgatgacaattttagtgacaaccttacttttctctttttttattggtcaaaaacaatg 34765820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 34972242 - 34972172
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| |||||||| |||| |||||||||||| | |||| ||| |||||||||||| | |||| ||||||    
T  34972242 tgatatttgtacatctatttaatgacaactttggtgacaattttgtttttctcttttttgattgatcaaaa 34972172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 6105336 - 6105405
Alignment:
Q  28 tgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||| | |||||||||  | ||||||||||||| |||| || | ||||||||||| |||||    
T  6105336 tgtacatccatttaaagacaactttagtgacaactttattttcctctcttttgattggtcaaaaacaatg 6105405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 1065594 - 1065518
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | | ||| || ||||||| | ||||| |||||||||| |||||    
T  1065594 tgatatttgtacatccattccatgacaactttagtgataaccttgtttttctatcttctttttggtcaaaaacaatg 1065518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 20288710 - 20288634
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||| || |||||  | ||||| || ||| ||||| |||||||||||||||| |||||    
T  20288710 tgatatttgtacatccattccattacgactttagtgacaacgttgtttctctctcttcttattggtcaaaaacaatg 20288634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 21075339 - 21075263
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||| || |||||  | ||||| || ||| ||||| |||||||||||||||| |||||    
T  21075339 tgatatttgtacatccattccattacgactttagtgacaacgttgtttctctctcttcttattggtcaaaaacaatg 21075263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 32185596 - 32185636
Alignment:
Q  57 acaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| ||||||||| |||||||||||||||| |||||    
T  32185596 acaactttgtttttctctcttcttattggtcaaaaacaatg 32185636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 38504347 - 38504271
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| || |||| |||| | |||| ||| ||||||||| || | ||||||||||| |||||    
T  38504347 tgatatttgtacatccatttaattacaattttggtgacaattttgtttttctctcttttgattggtcaaaaacaatg 38504271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 39258949 - 39259025
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| |||||||| ||| || | ||  || ||||||||| |||||||| ||||||| |||||    
T  39258949 tgatatttgtacatccattccatgacaattttaatgataatcttgtttttctctcttcttattagtcaaaaacaatg 39259025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 33491923 - 33491845
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  33491923 tagagtggtgatatatgtacatccatttgaagacaactttgattacaaccttatttctctctcttcttattggtcaaaa 33491845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 1804053 - 1803970
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||| |||||||||| || |||||||||||| | ||||| || ||||||||| |||||||||||||||| |||||    
T  1804053 agagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 1803970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 27335041 - 27334971
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| ||||||||||||||||||||||||| || ||||| || ||||||||| || |||||||||||||    
T  27335041 tgatatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtcaaaa 27334971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 27395781 - 27395711
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| ||||||||||||||||||||||||| || ||||| || ||||||||| || |||||||||||||    
T  27395781 tgatatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtcaaaa 27395711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 2862249 - 2862179
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| || |||||||||| |||||||||||| | |||| ||| ||| ||||||||||||||||||||||    
T  2862249 tgatatttggacatccatttaatgacaactttggtgacaattttgtttctctcttttcttattggtcaaaa 2862179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 2881510 - 2881440
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| || |||||||||| |||||||||||| | |||||||| ||| ||||| ||||||||||||||||    
T  2881510 tgatatttggacatccatttaatgacaactttggtgacaactttgtttctctctcttcttattggtcaaaa 2881440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 3660247 - 3660323
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| || ||||||||||||| |||||    
T  3660247 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctctttttattggtcaaaaacaatg 3660323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 11017567 - 11017483
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||| |||||||| |||||||||||| ||| ||||||||  | ||||| || ||| ||||| |||||||||||||||| |||||    
T  11017567 tagagcagtgatatttgtacatccattccataacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatg 11017483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 15328666 - 15328590
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| |||| |||| || | ||||||||||| |||||    
T  15328666 tgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatg 15328590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 28965734 - 28965810
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||||||||| |||||||||||| | | |||||| ||| ||||| || | ||||||||||| |||||    
T  28965734 tgatatatgtacatccatttaatgacaactttggtgataactttgtttctctctcttttgattggtcaaaaacaatg 28965810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 3339393 - 3339468
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||| |||||||||||||||||||||||||  | ||||  || ||||||||| || ||||||||||||| ||||    
T  3339393 tgatatttgtacatccatttcatgacaactttagtgacaatcttgtttttctctctttttattggtcaaaaacaat 3339468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 7693498 - 7693416
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||||||||| ||||||   |||||||||||| |||| |||  |||||||| |||||||||||| ||| |||||    
T  7693498 agagtagtgatatatgtacaaccatttgg-gacaactttgatgacaatttttattttctctcttcttattggtccaaaacaatg 7693416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 6435219 - 6435137
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| ||| |||||||||| || ||||||| |||| | ||||| || ||||||||| ||||||||||| |||| |||||    
T  6435219 gagtagtggtatttgtacatccaattgatgacaattttggtgacaaccttgtttttctctcttcttattggttaaaaacaatg 6435137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 17417120 - 17417205
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctct-tttcttattggtcaaaatcaatg 97  Q
    ||||| |||||||| |||| ||||| || |||||||||||| | ||||| ||||||||||||  ||||||||| |||||| |||||    
T  17417120 tagagaagtgatatttgtatatccaattgatgacaactttggtgacaaccttatttttctctcattcttattgatcaaaaacaatg 17417205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 2056960 - 2056884
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||| |||| ||||||||||||  | ||||| || ||| ||||| |||||||||||||||| |||||    
T  2056960 tgatatttgtacattcattccatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatg 2056884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 15364836 - 15364760
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| |||| |||| || | |||||| |||| |||||    
T  15364836 tgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaatg 15364760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 17835777 - 17835713
Alignment:
Q  33 atccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| | ||||||||| || |||||||| ||||||||| ||||||||||| |||| |||||    
T  17835777 atccatttaaggacaactttaatgacaactttgtttttctctcttcttattggttaaaaacaatg 17835713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 25924758 - 25924834
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||| ||||| |||||||||||| | |||||||| |||| |||| || | ||||||||||| |||||    
T  25924758 tgatatttgtacattcatttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatg 25924834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 30622208 - 30622125
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||||| | ||||   |||||||||||| ||||||||  |||| ||| |||||||||||| ||| |||||    
T  30622208 tagagtagtgatatatgtacaactatttgg-gacaactttgatgacaactttcattttttctcttcttattggtccaaaacaatg 30622125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 237292 - 237362
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| || ||||| |||| |||||||||||  | ||| |||| ||||||||| ||||||||||||||||    
T  237292 tgatatttggacatctatttaatgacaacttttgtgacatctttgtttttctctcttcttattggtcaaaa 237362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 12441710 - 12441628
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||| |||||||| | || |||||||||||| | ||||| ||  |||||||| ||||||| ||| |||| |||||    
T  12441710 gagtagtgatatttgtacatctaattgatgacaactttggtgacaaccttgcttttctctcttcttatcggttaaaaacaatg 12441628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 19788963 - 19789036
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 87  Q
    ||||||||||||||||||||| ||||||   |||||||||||| |||||| |  |||||||| |||| |||||||    
T  19788963 tagagtagtgatatatgtacaaccattt-gggacaactttgatgacaactctgattttctctcttctcattggtc 19789036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 28647322 - 28647395
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 87  Q
    ||||||||||||||||||||||||||||  | ||||||||| | ||||||||| |||  ||| |||| |||||||    
T  28647322 tagagtagtgatatatgtacatccatttggt-acaactttgttgacaactttaatttgttctcttctcattggtc 28647395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 30795983 - 30796064
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    ||||||||||||| |||||  ||||||  |||||||||  || |||||||| | ||||| |||||||||||||||||| ||||    
T  30795983 agagtagtgatatttgtactaccatttg-tgacaacttgtatgacaactttctatttcttttttcttattggtcaaaaacaat 30796064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 17902586 - 17902662
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||| ||| ||||||||||||  | | ||  || ||||||||| |||||||||||||||| |||||    
T  17902586 tgatatttgtacatctattccatgacaactttagtgataatattgtttttctctcttcttattggtcaaaaacaatg 17902662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 36909732 - 36909813
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||||||||||| |||||    
T  36909732 gagtagtgatatttgtacatccatttcat-acaactttgatgacaactttgtttttctctcttcttattggtcaaaaacaatg 36909813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 10466075 - 10466158
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||||||  ||||| ||||||||| || |||||||| |||||||||||||||||| ||||||| |||||    
T  10466075 agagtagtgatatatgtacatctgtttcaagacaactttcatgacaactttgtttttctcttttcttattagtcaaaaacaatg 10466158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 10550345 - 10550429
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||| |||||| || |||||||||| |||||||||||| | |||||||| ||||||||| || ||||||||||||| |||||    
T  10550345 tagagtaatgatatttggacatccatttgatgacaactttgttgacaactttgtttttctctatttttattggtcaaaaacaatg 10550429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 37966533 - 37966457
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||||||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  37966533 tgatatttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 37966457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 6885087 - 6885011
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||| |||||||||||||||||  | |||||||| ||||||||| |||||||| ||||||| |||||    
T  6885087 tgatatttgtacattcatttcatgacaactttagtgacaactttgtttttctctcttcttattagtcaaaaacaatg 6885011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 23047977 - 23048053
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  23047977 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 23048053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 27307139 - 27307215
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| | |||||||||| ||||||||||||  | ||||| |||||||||||| |||||||||||||||| |||||    
T  27307139 tgatatttatacatccattccatgacaactttagtgacaaccttatttttctctcttcttattggtcaaaaacaatg 27307215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 36582433 - 36582357
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| |||||||||||| | ||||| || ||||||||| |||| ||||||||||| |||||    
T  36582433 tgatatttgtacatccatttgatgacaactttggtgacaaccttgtttttctctattctaattggtcaaaaacaatg 36582357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 44018137 - 44018213
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||||||||| ||||| ||||| ||||||||||| || | ||  || ||||||||||||||||||||||||||    
T  44018137 gagtagtgatatatctacattcatttaatgacaactttaatgaaaatcttgtttttctcttttcttattggtcaaaa 44018213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 44484550 - 44484626
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||| |||| |||||||||||  | |||||||| ||||||||| |||||||||||||||| |||||    
T  44484550 tgatatttgtacatcaattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatg 44484626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 42678727 - 42678688
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttga 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42678727 gagtagtgatatatgtacatccatttcatgacaactttga 42678688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 3195981 - 3196051
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| ||||||||||||||||    
T  3195981 tgatatttgtacatccattccatgacaactttagtaacaaccttgtttttctctcttcttattggtcaaaa 3196051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 30973879 - 30973961
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||| |||||||||| | ||||| |||||| | |||||| ||||||||  || ||||||||||||| |||||    
T  30973879 gagtagtgatatatgaacatccatttgaagacaattttgatgataactttgtttttctcactttttattggtcaaaaacaatg 30973961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 17826229 - 17826148
Alignment:
Q  16 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||||||||| |||| | ||||||||| || ||||| || ||||||||| |||||||| || |||| |||||    
T  17826229 agtagtgatatatgtacatctattttaagacaactttcatgacaaccttgtttttctctcttcttattagtaaaaaacaatg 17826148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 31847717 - 31847632
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaa-ctttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||||||||||||   ||||||||| || |||| |||  ||||| |||||| ||||||||||||| |||||    
T  31847717 tagagtagtgatatatgtacatccatttgtagacaactttcatgacaaccttgttttttttctttttttattggtcaaaaacaatg 31847632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 29871249 - 29871325
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||| |||| ||||||||||||||||| | |||||||| ||| ||||| ||||||||||| |||| |||||    
T  29871249 tgatatttgtccatctatttcatgacaactttggtgacaactttgtttctctctcttcttattggttaaaaacaatg 29871325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 5962821 - 5962739
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||| |||||||| | || |||| || |||| | | |||||| ||||||||| |||||||||||||||| |||||    
T  5962821 gagtagtgatatttgtacatctaattgatgataattttggtgataactttgtttttctctcttcttattggtcaaaaacaatg 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 33857384 - 33857318
Alignment:
Q  31 acatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||| |||| | |||||||||| | |||||||||||||||| | |||||||||||||||| |||||    
T  33857384 acatctatttaaggacaactttggtgacaactttatttttctgtcttcttattggtcaaaaacaatg 33857318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 38572121 - 38572047
Alignment:
Q  16 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaa 90  Q
    ||||||||||| ||||||| || || || ||||||||| | ||||| || ||||||||| |||||||||||||||    
T  38572121 agtagtgatatttgtacattcaattgataacaactttggtgacaaccttgtttttctctcttcttattggtcaaa 38572047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 36383632 - 36383563
Alignment:
Q  28 tgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| ||||||| ||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  36383632 tgtacatcaatttcataacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 36383563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 2308213 - 2308288
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||||||| |||||| |||| | |||||||||||||| ||||||||  |||||||| |||| ||||| |||||    
T  2308213 gagtagtgatatttgtacaaccatat-atgacaactttgatgacaactttcattttctctcttctcattggccaaaa 2308288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 10688118 - 10688042
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| |||| ||||||| || | ||| || ||||||||| |||||||| ||||||| |||||    
T  10688118 tgatatgtgtacatccattccatggcaactttaatgaaaaccttgtttttctctcttcttattagtcaaaaacaatg 10688042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 30413626 - 30413702
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| ||||||| |||| | ||||||||  |||||||| || | ||||||||||| |||||    
T  30413626 tgatatttgtacatccatttaatgacaattttggtgacaactttgcttttctctcttttgattggtcaaaaacaatg 30413702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 38246645 - 38246721
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||| ||| ||||||||||||  | ||||| || ||| ||||| |||||||||||||||| |||||    
T  38246645 tgatatttgtacatcaattccatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatg 38246721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 29192536 - 29192618
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||||||||||| ||||||||  |||| | |||||||| || |||||||| |||||||||| | | ||||||||||| ||||    
T  29192536 tagagtagtgatatttgtacatctctttctt-acaacttttatgacaactttgtttttctcttctatgattggtcaaaaacaat 29192618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 3585810 - 3585728
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    ||||||||||||| ||||||||  ||||   |||||||| || |||||||| ||||||||| || | |||| |||||||||||    
T  3585810 agagtagtgatatttgtacatctttttctaaacaacttttatgacaactttgtttttctctattttgattgatcaaaatcaat 3585728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 12192130 - 12192048
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||| |||||||||| || || | ||||||| | ||||| ||  |||||||| || ||||||||||||| |||||    
T  12192130 gagtagtgatatttgtacatccaattgataataactttggtgacaaccttgcttttctctatttttattggtcaaaaacaatg 12192048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 12358492 - 12358414
Alignment:
Q  19 agtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| |||||||||| || |||||||||||| | ||||| ||  |||||| | || ||||||||||||| |||||    
T  12358492 agtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatctttttattggtcaaaaacaatg 12358414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 23391239 - 23391169
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| |||||||||||| ||||| ||||||    |||||||| ||||||||| ||||||||| ||||||    
T  23391239 tgatatttgtacatccattccatgataactttagcgacaactttgtttttctctcttcttattgatcaaaa 23391169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 39310010 - 39309976
Alignment:
Q  154 ttgttacaaaatgattatataaatatcatttctca 188  Q
    ||||||||||||||||||| |||||||||||||||    
T  39310010 ttgttacaaaatgattatacaaatatcatttctca 39309976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 28302032 - 28301963
Alignment:
Q  28 tgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| |||| |||| || |||||| |||||| | ||||| |||||||||||| ||||||| |||||    
T  28302032 tgtacatctatttaatgataattttgatgacaactatgtttttatcttttcttattagtcaaaaacaatg 28301963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 33029996 - 33030061
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggt 86  Q
    |||||| |||||||| || | |||||||||||||| ||||| || ||||||||| || ||||||||    
T  33029996 tgatatttgtacatctatctaatgacaactttgatgacaaccttgtttttctctatttttattggt 33030061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 39744483 - 39744563
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||||||||| |||||| || ||||   |||||||| || |||||||| ||||||||| || | ||||||||||||||||    
T  39744483 gagtagtgatatttgtaca-ccttttctaaacaactttcatgacaactttgtttttctctattttgattggtcaaaatcaat 39744563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 14954497 - 14954533
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaac 49  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  14954497 tagagtagtgatatatgtacatcaatttgatgacaac 14954533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 29168881 - 29168837
Alignment:
Q  42 atgacaactttgattacaactttatttttctcttttcttattggt 86  Q
    |||||||||||| | ||||| |||||||||||| |||||||||||    
T  29168881 atgacaactttggtgacaacattatttttctctcttcttattggt 29168837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 42665694 - 42665781
Alignment:
Q  8 taaactagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||| |||||||||||||| |||||| ||||||  | ||||||||||| ||||||||  ||| ||||||| | ||||||| ||| ||||    
T  42665694 taaattagagtagtgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctcttttttcattggtccaaaacaat 42665781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 26547417 - 26547335
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||| |||||| |||||||| | ||||||||||| |||||    
T  26547417 gagtagtgatatatgtacatccatttgaagacaactttgatgacaaccttatttctctcttttttaattggtcaaaaacaatg 26547335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 34395807 - 34395884
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||||||||||||| |||||||| | |||||||||||| |||||||| ||| |||||||||| |||||||||||    
T  34395807 agagtagtgatatatgtatatccatttgaagacaactttgatgacaactttgtttctctcttttctaattggtcaaaa 34395884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 51193021 - 51193097
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||| || ||||||||| |||||||||| |||||    
T  51193021 gagtagtgatatatgtacatccatttgatgacaactttcatgacaacattgtttttctctcttcttattggccaaaa 51193097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 7078391 - 7078470
Alignment:
Q  18 tagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||||||| | |||||||||||| ||||| || ||| |||||||||| ||||||||||| |||||    
T  7078391 tagtgatatatgtacatccatttgaagacaactttgatgacaaccttgtttctctcttttctaattggtcaaaaacaatg 7078470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 50035432 - 50035502
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| |||||||| ||||||||||||||||  | ||||||||||||||||||||| |||||||||||||    
T  50035432 tgatatttgtacatctatttcatgacaactttagtgacaactttatttttctcttttgttattggtcaaaa 50035502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 7371842 - 7371918
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||| ||||||||||||  | | |||||| ||||||||| |||||||||||||||| |||||    
T  7371842 tgatatatgtacatccattccatgacaactttactgataactttgtttttctctcttcttattggtcaaaaacaatg 7371918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 25130887 - 25130804
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||| |||||||| |||||||| ||||||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  25130887 agagcagtgatatttgtacatctatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 25130804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 11097776 - 11097854
Alignment:
Q  19 agtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||||||||||| | |||||||||||| ||||  || ||| |||||||||| ||||||||||| |||||    
T  11097776 agtgatatatgtacatccatttgaagacaactttgatgacaaacttttttctctcttttctaattggtcaaaaacaatg 11097854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 48871843 - 48871925
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||||| |||||| ||||||||| || ||||| || |||||||| || |||||| ||||||| |||||    
T  48871843 gagtagtgatatatgtacatctatttcaagacaactttcatgacaaccttgtttttctccttccttattagtcaaaaacaatg 48871925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 26501472 - 26501396
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||| ||| |||||||||||| || ||||| || ||||||||| |||||||||||||||| |||||    
T  26501472 tgatatttgtacatctattacatgacaactttaatgacaaccttgtttttctctcttcttattggtcaaaaacaatg 26501396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 33660227 - 33660152
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||| || ||||| | | ||||||||||||||||    
T  33660227 gagtagtgatatatgtacatccatttgatgacaactttcatgacaaccttgttttt-tatcttcttattggtcaaaa 33660152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 42843230 - 42843314
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||| |||||||||| || |||| || |||| | ||||| || ||||||||| |||||||||||||||| |||||    
T  42843230 tagagtagtgatatttgtacatccaattgatgataattttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 42843314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 30530287 - 30530369
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||||||||| ||||||   |||||||||||| ||||||||  |||||||| |||||||||||| ||| |||||    
T  30530287 agagtagtgatatatgtacaaccatttgg-gacaactttgatgacaactttcattttctctcttcttattggtccaaaacaatg 30530369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 19920929 - 19920863
Alignment:
Q  31 acatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||| | |||||||||| | |||||||| ||||||||| |||||||||||||||| |||||    
T  19920929 acatccatttaaggacaactttggtgacaactttgtttttctctcttcttattggtcaaaaacaatg 19920863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 5315394 - 5315323
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggt 86  Q
    ||||||||| |||||||||| |||||| | |||||||||||| || |||||  ||||||||||||||||||||    
T  5315394 agagtagtgctatatgtacaaccatttta-gacaactttgatgacgactttcattttctcttttcttattggt 5315323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 13813735 - 13813659
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||| ||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  13813735 tgatatttgtacatccattccataacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 13813659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 25995621 - 25995561
Alignment:
Q  37 atttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||||| || ||||| |||||||||||| || ||||||||||||| |||||    
T  25995621 atttcatgacaactttaatgacaaccttatttttctctctttttattggtcaaaaacaatg 25995561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 30196897 - 30196813
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||| |||||| |  ||||   |||||||| || |||||||||||||||||| || | |||||||||||||||||    
T  30196897 tagagtagtgatatttgtacacctctttctaaacaactttcatgacaactttatttttctctattttgattggtcaaaatcaatg 30196813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 43457708 - 43457783
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||||||||||||||||||||| | ||||| |||||| ||||| || ||||||| |||| |||||| ||||||    
T  43457708 gagtagtgatatatgtacatccatttgaagacaaatttgatgacaaccttgtttttctgtttt-ttattgatcaaaa 43457783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 9011833 - 9011746
Alignment:
Q  10 aactagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||| |||| |||||| |||||||||||||||||||||  ||  | ||||  || ||||||||| |||||||||||||||| |||||    
T  9011833 aactatagtaatgatatttgtacatccatttcatgacaatgttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatg 9011746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 29489246 - 29489329
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||| |||||||| |||||||  ||||||||||||||||  | ||||| || ||||||| | |||||||||||||||| |||||    
T  29489246 agagcagtgatatttgtacatatatttcatgacaactttagtgacaaccttgtttttctttcttcttattggtcaaaaacaatg 29489329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 6829679 - 6829749
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| |||||||||||| ||||||||||||  | ||||  || ||||||||| ||||||||||||||||    
T  6829679 tgatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaa 6829749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 8934422 - 8934503
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    ||||||||||||| || ||| ||||||  |||||| ||  || |||||||| |||||||||||||||||||||||||| ||||    
T  8934422 agagtagtgatatttgaacaaccatttg-tgacaatttctatgacaactttctttttctcttttcttattggtcaaaaacaat 8934503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 34002209 - 34002290
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||| | ||||   |||||||||||| ||||||||  |||||||| |||||||||||| ||| |||||    
T  34002209 gagtagtgatatatgtacaactatttgg-gacaactttgatcacaactttcattttctctcttcttattggtccaaaacaatg 34002290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 10385591 - 10385515
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| |||| ||||||| | |||| |||  ||||||||||| | ||||||||||| |||||    
T  10385591 tgatatttgtacatccatttaatgataactttggtgacaattttgcttttctcttttttgattggtcaaaaacaatg 10385515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 27578359 - 27578283
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||| |||| |||||||| |||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  27578359 tgatatttgtacattcattccatgacaattttagtaacaaccttgtttttctctattcttattggtcaaaaacaatg 27578283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 39669962 - 39669918
Alignment:
Q  42 atgacaactttgattacaactttatttttctcttttcttattggt 86  Q
    |||||||||||||| |||||||||||||||||| || ||||||||    
T  39669962 atgacaactttgatgacaactttatttttctctatttttattggt 39669918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 49189105 - 49189181
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| |||||||||||| | |||| ||| |||| |||| || | ||||||||||| |||||    
T  49189105 tgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatg 49189181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 50777312 - 50777392
Alignment:
Q  16 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||| |||||| |||||||||| || ||||||| |||| | ||||| || ||||||||| ||||||||||| |||| ||||    
T  50777312 agtaatgatatttgtacatccaattgatgacaattttggtgacaaccttgtttttctctcttcttattggttaaaaacaat 50777392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 7420818 - 7420743
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaa 89  Q
    |||||| |||||| ||||||   ||||| |||||||||| |  |||||||| || |||||||||||||||||||||    
T  7420818 agagtaatgatatttgtacaattatttcgtgacaacttttaggacaacttttttcttctcttttcttattggtcaa 7420743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 36669271 - 36669334
Alignment:
Q  28 tgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||| ||||||| ||||||||||||  | ||||| || ||||||||| ||||||||||||||||    
T  36669271 tgtaaatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaa 36669334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 11812531 - 11812497
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaa 48  Q
    ||||||||||||||||||||| |||||||||||||    
T  11812531 agagtagtgatatatgtacattcatttcatgacaa 11812497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 46902787 - 46902709
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttattttt-ctcttttcttattggtcaaaa 91  Q
    ||||||||||||| |||||||||| || ||||||| |||  | |||||||| ||||| |||| ||||||||||| ||||    
T  46902787 agagtagtgatatttgtacatccaattgatgacaattttagtgacaactttttttttcctctcttcttattggtaaaaa 46902709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 3291312 - 3291389
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| |||||| |||||||||||| |||||||| ||| || | ||| || ||| ||||| ||||| ||||||||||    
T  3291312 agagtaatgatatttgtacatccattccatgacaattttaatgataaccttgtttctctctcttctttttggtcaaaa 3291389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 5383936 - 5383883
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctct 74  Q
    |||||| ||||||||||||| || ||||||||| | |||||||| |||||||||    
T  5383936 tgatatttgtacatccatttaattacaactttggtgacaactttgtttttctct 5383883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 5959559 - 5959518
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgatt 56  Q
    |||||||||||| |||||||||| || |||||||||||||||    
T  5959559 gagtagtgatatttgtacatccaattgatgacaactttgatt 5959518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 21154405 - 21154357
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaacttt 64  Q
    ||||||||||||||||||| |||||| || ||||||||||| ||||||||    
T  21154405 gagtagtgatatatgtacaaccatttgat-acaactttgatgacaacttt 21154357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 29362622 - 29362662
Alignment:
Q  57 acaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| ||||||||| |||||||||||||||| |||||    
T  29362622 acaactttgtttttctctcttcttattggtcaaaaacaatg 29362662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 34941838 - 34941890
Alignment:
Q  45 acaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| || ||||||| |||| ||||| |||||||||||||||| |||||    
T  34941838 acaacttttatgacaacttcatttctctctcttcttattggtcaaaaacaatg 34941890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 51168686 - 51168738
Alignment:
Q  45 acaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| || |||| ||| ||||||||||||||||||||| |||| |||||    
T  51168686 acaacttttatgacaattttttttttctcttttcttattggttaaaaacaatg 51168738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 2193690 - 2193779
Alignment:
Q  8 taaactagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| |||||||||| || |||||||||||||| ||||  || ||||||||| |||||||||||||||| |||||    
T  2193690 taaacttgagtagtgatatttgtacatccaattgatgacaactttgatgacaatcttgtttttctctcttcttattggtcaaaaacaatg 2193779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 19720529 - 19720611
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||| || ||| |||||||| | ||||||||||| |||||    
T  19720529 gagtagtgatatatgtacatccatttgaagacaactttgatgacaaccttgtttctctcttttataattggtcaaaaacaatg 19720611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 32365555 - 32365637
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||||| |||| |||| ||||||||| | ||| |||||||||||| || ||||||||||||| |||||    
T  32365555 gagtagtgatatatgtacatctattttatgataactttgatgataacattatttttctctctttttattggtcaaaaacaatg 32365637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 20632533 - 20632618
Alignment:
Q  12 ctagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||| |||||||||| || ||||||| |||| | |||||||||||||| ||| ||| |||||||||||| |||||    
T  20632533 ctagagtagtgatatttgtacatccaattgatgacaattttggtgacaactttatttttttctcttcctattggtcaaaaacaatg 20632618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 8026658 - 8026734
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | |||||||| ||||||||| |||||||||||||||| |||||    
T  8026658 tgatatttgtacatccattccatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatg 8026734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 24235497 - 24235421
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||||||||||||||||  | |||| |||| |||||||| |||||||||||||||| |||||    
T  24235497 tgatatttgtacatccatttcatgacaactttagtgacaattttaattttctctcttcttattggtcaaaaacaatg 24235421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 44368096 - 44368172
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||||||||||||||||  | ||||| |||||||||||| |||||||| ||||||| |||||    
T  44368096 tgatatttgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttatttgtcaaaaacaatg 44368172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 13267366 - 13267448
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||| |||| ||| ||||||| ||||||||||| | |||||| ||||||||| |||||||||||||||| |||||    
T  13267366 agagtagtgatatttgtaaatcgatttcat-acaactttgatgaaaactttgtttttctctcttcttattggtcaaaaacaatg 13267448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 32079293 - 32079210
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||| ||||||| |||||||| ||||||||  | ||||| || ||||||||||||||||||| |||||| |||||    
T  32079293 agagtagtgatatttgtacatacatttcataacaactttagtgacaaccttgtttttctcttttcttattgatcaaaaacaatg 32079210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 15638313 - 15638231
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||| |||||||||| || |||||||||||| | ||||| || ||||||||| |||||||||| ||||| |||||    
T  15638313 gagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggacaaaaacaatg 15638231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 31833117 - 31833191
Alignment:
Q  22 gatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    ||||||||||||||||||| |||| | ||||||| | |||||||||||| |||||| ||||||||||||| ||||    
T  31833117 gatatatgtacatccattttatgatatctttgatgataactttatttttttctttttttattggtcaaaaacaat 31833191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 5208221 - 5208297
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  5208221 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 5208297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 9032957 - 9032881
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||||||| ||||||||  | ||||| || |||||||||||| ||||||||||||| |||||    
T  9032957 tgatatttgtacatccatttcattacaactttagtgacaaccttgtttttctctttttttattggtcaaaaacaatg 9032881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 27001303 - 27001379
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  27001303 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 27001379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 33483992 - 33484076
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||| |||||| |||||||||| || |||||||||||| | ||||| ||| |||||||| ||||||||| |||||| |||||    
T  33483992 tagagtaatgatatttgtacatccaattgatgacaactttggtgacaaccttacttttctctcttcttattgatcaaaaacaatg 33484076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 47106088 - 47106012
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  47106088 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 47106012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 53662336 - 53662412
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||||||||||||||||  | | || ||| ||||||||| |||||||| ||||||| |||||    
T  53662336 tgatatatgtacatccatttcatgacaactttagtgataattttgtttttctctcttcttattagtcaaaaacaatg 53662412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 18568702 - 18568785
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||| |||||||||| || |||||||||||| | ||||| ||  |||||| | |||||||||||||||| |||||    
T  18568702 agagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatcttcttattggtcaaaaacaatg 18568785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 11012309 - 11012236
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 87  Q
    |||||||||||||||||||||  ||| |  ||||||||||||| ||||||||  |||||||||||||||||||||    
T  11012309 tagagtagtgatatatgtacaatcatatg-tgacaactttgatgacaactttcattttctcttttcttattggtc 11012236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 20056565 - 20056484
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||||||||| |||||||||| || |||||||||||| | ||||  ||  |||||||| |||||||||||||||| ||||    
T  20056565 gagtagtgatatttgtacatccaattgatgacaactttggtgacaatcttgcttttctctcttcttattggtcaaaaacaat 20056484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 3223166 - 3223090
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||| ||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  3223166 tgatatttgtacatccattccatgaaaactttagtgacaaccttctttttctctcttcttattggtcaaaaacaatg 3223090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 51377187 - 51377263
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| | ||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  51377187 tgatatttgtacatccattccttgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 51377263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 36728513 - 36728592
Alignment:
Q  18 tagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||| |  ||||||| || |||||||||||| | |||||||| ||||||||| ||||||||||| |||| |||||    
T  36728513 tagtgatatttacacatccaattgatgacaactttggtgacaactttgtttttctctcttcttattggtaaaaaacaatg 36728592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 46480421 - 46480476
Alignment:
Q  42 atgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||| || |||| |||||||||||||||| ||||||||||||| |||||    
T  46480421 atgacaactttaatgacaattttatttttctctttttttattggtcaaaaacaatg 46480476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 1796541 - 1796472
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| |||||||||||| ||||||||||||  | ||| |||| ||||||||| ||||||||||||||||    
T  1796541 tgatatttgtacatccattccatgacaactttagtgaca-ctttgtttttctctcttcttattggtcaaaa 1796472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 15515967 - 15515885
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||| ||||| |||| |  ||||||||||| ||||| || ||||||||  || ||||||||||||| |||||    
T  15515967 gagtagtgatatatgaacatctatttgaaaacaactttgatgacaaccttgtttttctcactttttattggtcaaaaacaatg 15515885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 22920159 - 22920240
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||||||||| ||||||||  ||||   |||||||| || |||||||| ||||||||| || | ||||||||||||||||    
T  22920159 gagtagtgatatttgtacatctttttctaaacaacttttatgacaactttgtttttctctattttgattggtcaaaatcaat 22920240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 22971640 - 22971559
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||||||||| ||||||||  ||||   |||||||| || |||||||| ||||||||| || | ||||||||||||||||    
T  22971640 gagtagtgatatttgtacatctttttctaaacaacttttatgacaactttgtttttctctattttgattggtcaaaatcaat 22971559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 32901514 - 32901430
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||| |||||||||| || |||| || |||| | ||||  || ||||||||| || ||||||||||||| |||||    
T  32901514 tagagtagtgatatttgtacatccaattgatgataattttggtgacaatcttgtttttctctctttttattggtcaaaaacaatg 32901430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 37022438 - 37022362
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||||||||||||||||  | | ||  || ||||||| |||| ||||||||||||| |||||    
T  37022438 tgatatttgtacatccatttcatgacaactttagtgataatcttgtttttctttttttttattggtcaaaaacaatg 37022362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 51224732 - 51224808
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| |||||||||||| | |||| ||| |||| |||| || | ||||||||||| |||||    
T  51224732 tgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatg 51224808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 56025433 - 56025357
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||| ||||| |||||||||||| | ||||||||  |||||||| || | ||||||||||| |||||    
T  56025433 tgatatttgtacattcatttaatgacaactttggtgacaactttgattttctctcttttgattggtcaaaaacaatg 56025357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 4514152 - 4514234
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||| |||||||||||||| | ||| ||||||||||||||| |||| |||  |||||||| |||| ||||||| ||| ||||    
T  4514152 tagagtggtgatatatgtacaactatt-catgacaactttgatgacaattttcattttctctcttctcattggtccaaaacaat 4514234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 13182516 - 13182433
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    ||||||| |||||| |||||||| | || |||||||||||||| | ||  || |||||||||||| |||||||| |||| ||||    
T  13182516 tagagtaatgatatttgtacatcaaattgatgacaactttgatgataatcttgtttttctctttttttattggttaaaaacaat 13182433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 35824006 - 35824088
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||||||||||| |  |||||||||||  ||| | |  ||||||| |||||||| |||||||| |||||    
T  35824006 agagtagtgatatatgtacatccatttaaaaacaactttgatgtcaa-tcttgttttctcatttcttataggtcaaaaacaatg 35824088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 40721862 - 40721897
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaa 48  Q
    |||||||||||||||||||||||||||| |||||||    
T  40721862 tagagtagtgatatatgtacatccatttgatgacaa 40721897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 41495193 - 41495114
Alignment:
Q  18 tagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||| |||| ||| | || |||| || |||| | |||||||| ||||||||| |||||||||||||||| |||||    
T  41495193 tagtgatatttgtatatctaattgatgataattttggtgacaactttgtttttctctcttcttattggtcaaaaacaatg 41495114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 13252565 - 13252527
Alignment:
Q  159 acaaaatgattatataaatatcatttctcaatgagatat 197  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  13252565 acaaaatgattatataaatatcatttctcagttagatat 13252527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 34260011 - 34259933
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    ||||||| |||||| |||||| ||||||  ||||||||||  | ||||  || ||||||||| ||||||||||||||||    
T  34260011 tagagtaatgatatttgtacaaccatttggtgacaacttttgtgacaaacttctttttctctcttcttattggtcaaaa 34259933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 53384238 - 53384311
Alignment:
Q  23 atatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||| ||||||||||||| |||| ||||||  | |||| ||| ||||||||| |||||||||||||||| |||||    
T  53384238 atatttgtacatccattttatgataactttagtgacaa-tttgtttttctctcttcttattggtcaaaaacaatg 53384311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 42177937 - 42178014
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||| |||||||| |||| || || || |||| ||||||| | |||||||| ||||||||| ||||||||||| ||||    
T  42177937 agagcagtgatatttgtatattcaattgatgataactttggtaacaactttgtttttctctcttcttattggttaaaa 42178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 4550511 - 4550435
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| | ||||||||||| |||||||||||| | |||| ||| |||| |||| || | ||||||||||| |||||    
T  4550511 tgatatttatacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatg 4550435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 10096628 - 10096711
Alignment:
Q  12 ctagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    ||||| |||||||||||||||| ||||||  | ||||||||||| ||||||||  ||| |||| |||| ||||||| ||| ||||    
T  10096628 ctagaatagtgatatatgtacagccatttggt-acaactttgatgacaactttcatttgctctcttctcattggtccaaaacaat 10096711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 31221590 - 31221514
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||| ||| |||||||| |||  | ||||  || ||||||||| |||||||||||||||| |||||    
T  31221590 tgatatttgtacatcaattccatgacaattttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatg 31221514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 33860464 - 33860516
Alignment:
Q  45 acaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||| ||||| | |||||||||| || ||||||||||||| |||||    
T  33860464 acaactttgatgacaacctcatttttctctcttattattggtcaaaaacaatg 33860516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 49424750 - 49424790
Alignment:
Q  57 acaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| ||||||||||||||||||||| |||| |||||    
T  49424750 acaactttgtttttctcttttcttattggttaaaaacaatg 49424790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 14914553 - 14914471
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||| |||||||||||||||| | ||||||||| |||||||| ||||| ||| |||||||||||||||| |||||    
T  14914553 agagtagtgatatttgtacatccatttcat-ataactttgatgacaactttgtttttatctcttcttattggtcaaaaacaatg 14914471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 12401362 - 12401293
Alignment:
Q  28 tgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||||||||||||||  | ||||| |||||||||||| |||||||||||||||| |||||    
T  12401362 tgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttattggtcaaaaacaatg 12401293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 17489532 - 17489449
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||| |||||||||| || |||||||||||| | ||||  || ||||||||| |||||||||||||||| |||||    
T  17489532 agagtagtgatatttgtacatccaattgatgacaactttggtgacaatcttgtttttctctcttcttattggtcaaaaacaatg 17489449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 18638729 - 18638801
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 87  Q
    |||||||||||||||||||| ||||||   |||||||||||| ||||||||  |||||||||||||||||||||    
T  18638729 agagtagtgatatatgtacaaccatttgg-gacaactttgatgacaacttttattttctcttttcttattggtc 18638801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 9594655 - 9594579
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| |||||| ||||| |||||||||||||||| |||||    
T  9594655 tgatatttgtacatccattccatgacaactttagtgacaaccttatttctctctcttcttattggtcaaaaacaatg 9594579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 15622221 - 15622145
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  15622221 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 15622145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 30574271 - 30574347
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| |||||||| |||  | |||||||| ||||||||| |||||||||||||||| |||||    
T  30574271 tgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatg 30574347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 33823588 - 33823664
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  33823588 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 33823664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 8959344 - 8959261
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||| |||||||||| || ||||||||||||   ||||| || ||||||||| || ||||||||||||| |||||    
T  8959344 agagtagtgatatttgtacatccaattgatgacaactttggcgacaaccttgtttttctctctttttattggtcaaaaacaatg 8959261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 15917920 - 15917995
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||| |||||||||||| ||||||||||||    |||||||||||| ||||| |||||||||||||||| ||||    
T  15917920 tgatatttgtacatccattccatgacaactttagcgacaactttatttctctctcttcttattggtcaaaaacaat 15917995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 3263402 - 3263472
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| ||||||||||||||||    
T  3263402 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaa 3263472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 4292968 - 4292890
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    ||||||| |||||| || |||| ||||| ||||||| |||| | |||||||| ||||||||| ||||||||||||||||    
T  4292968 tagagtaatgatatttggacattcatttgatgacaattttgttgacaactttgtttttctctattcttattggtcaaaa 4292890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 7077233 - 7077303
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| ||||||||| || | |||||||||||    
T  7077233 tgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtcaaaa 7077303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 12512970 - 12512894
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||  || ||||||||| |||||||||||||||| |||||    
T  12512970 tgatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatg 12512894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 41984168 - 41984251
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||| |||||||  | || |||||||||||| | |||| ||||||||| ||| ||||||||| |||||| |||||    
T  41984168 agagtagtgatatttgtacatttaattgatgacaactttggtgacaattttatttttttctcttcttattgatcaaaagcaatg 41984251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 9596708 - 9596784
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||| |||| ||||||||||||  | ||||  || ||||||||| |||||||||||||||| |||||    
T  9596708 tgatatttgtacattcattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatg 9596784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 11464017 - 11464093
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||| ||||||||  | ||||| || ||||||||| || ||||||||||||| |||||    
T  11464017 tgatatttgtacatccattccataacaactttagtgacaaccttgtttttctctctttttattggtcaaaaacaatg 11464093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 22920386 - 22920462
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||| ||| |||||||||| |  | ||||| || ||||||||| |||||||||||||||| |||||    
T  22920386 tgatatttgtacatctattacatgacaactatagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 22920462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 8725333 - 8725376
Alignment:
Q  44 gacaactttgattacaactttatttttctcttttcttattggtc 87  Q
    |||||||||||| ||||||||  |||||||||||||||||||||    
T  8725333 gacaactttgatgacaactttcattttctcttttcttattggtc 8725376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 25345515 - 25345440
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||| |||||||||||| ||| |||| |||  | ||||  |||||||||||| |||||||||||||||| ||||    
T  25345515 tgatatttgtacatccattccataacaattttagtgacaatcttatttttctctcttcttattggtcaaaaacaat 25345440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 36548274 - 36548337
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattg 84  Q
    |||||| ||||||||||| | |||||||||||||| ||||| || ||||||||| || ||||||    
T  36548274 tgatatttgtacatccatctaatgacaactttgatgacaaccttgtttttctctatttttattg 36548337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 3722965 - 3723046
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||| ||||||||||||| ||||||   |||||||||||| ||||||||  |||||||| || ||||||||| ||| |||||    
T  3722965 gagtaatgatatatgtacaaccatttgg-gacaactttgatgacaactttcattttctctctttttattggtccaaaacaatg 3723046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 14070499 - 14070537
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttg 53  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  14070499 gagtagtgatatttgtacatccatttgatgacaactttg 14070537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 16143674 - 16143604
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    ||||||||||||||| |||| |||||||||||||| ||||   | | |||||||  |||||||||||||||    
T  16143674 tgatatatgtacatctatttaatgacaactttgatgacaatcatgtgtttctctcatcttattggtcaaaa 16143604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 16292138 - 16292219
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||||||||||||||||| ||| || |||||||||||||  |||||| |  |||||||  || ||||||||||||| ||||    
T  16292138 agagtagtgatatatgtacaacca-ttgatgacaactttgaagacaactattattttctcgctttttattggtcaaaaacaat 16292219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 32634885 - 32634815
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| |||||||||||| |||||||| |||  | | || ||| ||||||||||||||||||||| ||||    
T  32634885 tgatatttgtacatccattccatgacaattttagtgataattttgtttttctcttttcttattggtaaaaa 32634815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 14648062 - 14648021
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgat 55  Q
    |||||||||||||||| |||||||||| | ||||||||||||    
T  14648062 agagtagtgatatatgaacatccatttgaagacaactttgat 14648021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 3155184 - 3155113
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 87  Q
    |||||||||||| ||||||  ||| | ||||||||||| || ||||||||  |||||||| ||||||||||||    
T  3155184 gagtagtgatatttgtacaatcatat-atgacaactttaatgacaactttcattttctctattcttattggtc 3155113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 5698246 - 5698298
Alignment:
Q  45 acaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| || ||||| || |||||||||||| ||||||||||||| |||||    
T  5698246 acaactttcatgacaaccttctttttctcttttgttattggtcaaaaacaatg 5698298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 19272036 - 19271960
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||| |||  ||||||| |||  | | |||||| ||||||||| |||||||||||||||| |||||    
T  19272036 tgatatttgtacatctattatatgacaattttagtgataactttgtttttctctcttcttattggtcaaaaacaatg 19271960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 26626737 - 26626789
Alignment:
Q  45 acaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||| || ||||| || |||||||||||| ||||||||||||| |||||    
T  26626737 acaactttcatgacaaccttttttttctcttttgttattggtcaaaaacaatg 26626789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 38011049 - 38010973
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||| ||| |||||||| |||  | |||| ||| ||||| ||| |||||||||||||||| |||||    
T  38011049 tgatatttgtacatctattccatgacaattttagtgacaattttgtttttttctcttcttattggtcaaaaacaatg 38010973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 37385120 - 37385202
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    ||||||||||||| |||||||||| || |||||||||||| | ||||| || || ||||||||||||||||||||||| ||||    
T  37385120 agagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgttcttctcttttcttattggtcaaaaacaat 37385202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 10014841 - 10014925
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||||||| |||||||||| || |||||||||||| | |||| ||| ||||||||| || ||||||||||||| |||||    
T  10014841 tagagtagtgatatttgtacatccaattgatgacaactttggtgacaattttgtttttctctctttttattggtcaaaaacaatg 10014925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 26041487 - 26041411
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| |||||||||||  | |||||||| ||||||||| |||||||||||||||| |||||    
T  26041487 tgatatttgtacatccattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatg 26041411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 30864311 - 30864387
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || |||||||||||||||||||||||||| |||||    
T  30864311 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctcttttcttattggtcaaaaacaatg 30864387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 44511316 - 44511240
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| |||||||||||  | |||| ||| |||||||||||||||||||||||||| |||||    
T  44511316 tgatatttgtacatccattttatgacaactttagtgacaattttgtttttctcttttcttattggtcaaaaacaatg 44511240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 37149362 - 37149444
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||||||||||||||||||| |||||| ||||||||| || ||||| || ||||||| | ||||||||||| |||| ||||    
T  37149362 agagtagtgatatatgtacatctatttcaagacaacttttatgacaaccttgtttttctttcttcttattggtaaaaaacaat 37149444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 42431906 - 42431824
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||| |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  42431906 gagtaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 42431824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 27164731 - 27164807
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| |||||||| |||  | |||||||| ||||||||| |||||||||||||||| |||||    
T  27164731 tgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatg 27164807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 8742567 - 8742484
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||| |||||||||| || |||||||||||| | ||||| || ||||||||| ||||||||| ||| || |||||    
T  8742567 agagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattgatcataaacaatg 8742484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 33050360 - 33050285
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||| |||||||||||||||||||||||||  | ||||| || ||| ||||| |||||||||||||||| ||||    
T  33050360 tgatatttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaat 33050285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 1838347 - 1838423
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||||||||| |||||||||| || |||||||||||| | ||||| || ||||| ||| ||||||||| ||||||    
T  1838347 gagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttttctcttcttattgatcaaaa 1838423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 17500881 - 17500798
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||||| ||||||   |||||||||||| | ||||||  |||||||| |||||||||||| ||| |||||    
T  17500881 tagagtagtgatatatgtacaaccatttgg-gacaactttgatgataactttcattttctctcttcttattggtccaaaacaatg 17500798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 17552333 - 17552416
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||||||||||||||||||| ||||||   |||||||||||| | ||||||  |||||||| |||||||||||| ||| |||||    
T  17552333 tagagtagtgatatatgtacaaccatttgg-gacaactttgatgataactttcattttctctcttcttattggtccaaaacaatg 17552416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 49089053 - 49089124
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 87  Q
    ||||||||||||||||||| | ||||| ||||||||||||| ||||||||  |||||||| |||| |||||||    
T  49089053 gagtagtgatatatgtacaacaatttc-tgacaactttgatgacaactttcattttctctcttctcattggtc 49089124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 39369469 - 39369403
Alignment:
Q  31 acatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||||||| | |||||||||  | |||||||| ||||||||||||||||||||| |||| |||||    
T  39369469 acatccatttaaggacaactttagtgacaactttgtttttctcttttcttattggttaaaaacaatg 39369403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 8326309 - 8326232
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| |||||| |||||||||||||||| ||||||||  | ||||   ||||||||||| ||||||||| ||||||    
T  8326309 agagtaatgatatttgtacatccatttcataacaactttagtgacaatcgtatttttctctcttcttattgatcaaaa 8326232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 1790132 - 1790092
Alignment:
Q  57 acaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||| |||| ||||||||||||||||||||||||||||||    
T  1790132 acaaccttatgtttctcttttcttattggtcaaaatcaatg 1790092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 2346953 - 2347029
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||| ||||| |||||||||||  | ||||| |||||||||| | || ||||||||||||| |||||    
T  2346953 tgatatttgtacattcattttatgacaactttagtgacaaccttatttttctttcttgttattggtcaaaagcaatg 2347029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 38978668 - 38978593
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||| |||||||||||||||  | ||||| || ||||||||| |||||||| ||||||| |||||    
T  38978668 tgatatttgtacatcc-tttcatgacaactttagtgacaaccttgtttttctctcttcttatttgtcaaaaacaatg 38978593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 48057391 - 48057467
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||| |||| |||||| ||||  | |||| ||| ||||||||| |||||||||||||||| |||||    
T  48057391 tgatatttgtacatctatttgatgacatctttagtgacaattttgtttttctctcttcttattggtcaaaaacaatg 48057467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 1790162 - 1790128
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaac 49  Q
    ||||||||||||||||||||| |||||||||||||    
T  1790162 gagtagtgatatatgtacatcaatttcatgacaac 1790128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 19880127 - 19880197
Alignment:
Q  23 atatatgtacatccattt-catgacaactttgattacaactttatttttctcttttcttattggtcaaaat 92  Q
    |||| ||||||||||||| ||||||||||||  | ||||  |||||||||||| ||||||| |||||||||    
T  19880127 atatttgtacatccatttgcatgacaactttagtgacaatcttatttttctctcttcttatgggtcaaaat 19880197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 25614709 - 25614791
Alignment:
Q  15 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||| |||||| |||||||| | || ||||||| |||| | ||||| || ||||||||| ||||||||||| |||| |||||    
T  25614709 gagtaatgatatttgtacatctaattgatgacaattttggtgacaaccttgtttttctctcttcttattggtaaaaaacaatg 25614791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 30201436 - 30201366
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| ||||||| ||||  ||||||||||| || ||||  |||||||||||| || |||||||||||||    
T  30201436 tgatatttgtacatacattctatgacaactttaatgacaatcttatttttctctctttttattggtcaaaa 30201366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 42476454 - 42476532
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| ||||||| |||||||||| || ||||||||||||   ||||| || ||||| ||| || |||||||||||||    
T  42476454 tagagtggtgatatttgtacatccaattgatgacaactttggcgacaaccttgtttttttctctttttattggtcaaaa 42476532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 116808 - 116732
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||||||||||||||||  | ||||  || ||||||| | || ||||| ||||||| |||||    
T  116808 tgatatttgtacatccatttcatgacaactttagtgacaatcttgtttttctttctttttattcgtcaaaaacaatg 116732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 17157310 - 17157234
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||| |||| |||||||||||| | | ||||||  |||||||| || | ||||||||||| |||||    
T  17157310 tgatatttgtacatcaatttaatgacaactttggtgataactttgcttttctctcttttgattggtcaaaaacaatg 17157234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 42060834 - 42060758
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||| |||| |||||||||||| | ||||||||   ||||||| || | ||||||||||| |||||    
T  42060834 tgatatttgtacatctatttaatgacaactttggtgacaactttgcctttctctcttttgattggtcaaaaacaatg 42060758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 47530185 - 47530249
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattgg 85  Q
    |||||| |||||||| ||||||||||||||||| | | ||| || ||||||| | ||||||||||    
T  47530185 tgatatttgtacatctatttcatgacaactttggtgataaccttgtttttctttcttcttattgg 47530249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 1390 - 1466
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| |||||||| |||  | |||||||| ||||||||| |||||||||||||||| |||||    
T  1390 tgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatg 1466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 17152 - 17076
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| ||| ||||| |||| ||||||||||| |||||    
T  17152 tgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttctgattggtcaaaaacaatg 17076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 88985 - 88909
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||| |||||| ||||||  | ||||| |||||||| |||||||||||||||||||| |||||    
T  88985 tgatatttgtacatccatctcatgataactttagtgacaaccttatttttttcttttcttattggtcaaaaacaatg 88909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 147150 - 147226
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  147150 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 147226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 249036 - 249112
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| ||||||||| |||||| |||||    
T  249036 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatg 249112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 3538 - 3468
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| ||||||| ||||||| |||||||||  | ||||| |||||||||| | ||||||||||||||||    
T  3538 tgatatttgtacattcatttcacgacaactttagtgacaaccttatttttctttcttcttattggtcaaaa 3468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 9607 - 9531
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| |||| |||| || | |||||| |||| |||||    
T  9607 tgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaatg 9531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 24849 - 24774
Alignment:
Q  22 gatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    ||||| |||||||| ||||||||| || |||  | ||||| |||||||||||| ||||||||||| |||| |||||    
T  24849 gatatttgtacatctatttcatgataattttagtgacaaccttatttttctctcttcttattggttaaaaacaatg 24774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 29960 - 29897
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattg 84  Q
    |||||| ||||||||||||| |||||||||||  ||||||| || ||||||||| || ||||||    
T  29960 tgatatttgtacatccatttaatgacaactttagttacaaccttgtttttctctctttttattg 29897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 31194 - 31264
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 91  Q
    |||||| |||||||| ||| ||||| || |||  | |||||||| ||||||||| ||||||||||||||||    
T  31194 tgatatttgtacatctattacatgataattttagtgacaactttgtttttctctgttcttattggtcaaaa 31264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 156089 - 156008
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 96  Q
    |||||||||||||||||||| ||||||   |||||||||||| |||||| |  |||||||| |||| ||||||| ||| ||||    
T  156089 agagtagtgatatatgtacaaccattt-gggacaactttgatgacaactctcattttctctcttctcattggtccaaaacaat 156008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 16574 - 16502
Alignment:
Q  14 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 87  Q
    |||||||||||||||  ||| |||||| |||||||||||| | ||||||||  |||||||| |||| |||||||    
T  16574 agagtagtgatatattgacaaccattt-atgacaactttgttgacaacttttattttctctattctcattggtc 16502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 700 - 660
Alignment:
Q  13 tagagtagtgatatatgtacatccatttcatgacaactttg 53  Q
    |||||||||||||| |||||||||| || ||||||||||||    
T  700 tagagtagtgatatttgtacatccaattgatgacaactttg 660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 18771 - 18696
Alignment:
Q  21 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 97  Q
    |||||| |||||||||||| || |||||||||  | | ||| |||||||||||| |||||||| ||||||| |||||    
T  18771 tgatatttgtacatccattcca-gacaactttagtgataaccttatttttctctattcttattagtcaaaaacaatg 18696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University