View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14776_low_29 (Length: 311)
Name: NF14776_low_29
Description: NF14776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14776_low_29 |
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Alignment Details
Target: chr4 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 13 - 293
Target Start/End: Original strand, 30092733 - 30093013
Alignment:
| Q |
13 |
gagaagcaaaggccaataatcaagcacttttaaagtttaatccactaactagtccactagccaaacaatactacatatactactttaaactttgaaagga |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30092733 |
gagaagcaaaggccaataatcaagcacttttaaagtttaatccactaactagtccactagccaaacaatactacatatactactttaaactttgaaagga |
30092832 |
T |
|
| Q |
113 |
caaggacaatggtcatgtaccaaaccaagggaataaaattaatacacatcaacataactttattttattgccaaactagatgctaatgctatacaattcc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30092833 |
caaggacaatggtcatgtaccaaaccaagggaataaaattaatacacatcaacataactttattttattgccaaactagatgctaatgctatacaattcc |
30092932 |
T |
|
| Q |
213 |
tttctataaaccaccaatatatacatttagcatcacaaaaccagtacaataaattccccacttatattattacctgctttc |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30092933 |
tttctataaaccaccaatatatacatttagcatcacaaaaccagtacaataaattccccacttatattattacctgctttc |
30093013 |
T |
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