View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14776_low_33 (Length: 295)
Name: NF14776_low_33
Description: NF14776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14776_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 36100014 - 36100247
Alignment:
| Q |
19 |
atccaattggttatccaaacaaaagtgacacctattaattaggcaggctactttcttataactaagtaatcttctggtggtgtaacacaaggcccagttc |
118 |
Q |
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| T |
36100014 |
atccaattggttatccaaacaaaagtgacccctattaattaggcagaccactttcttataactaagtaatcttctggtggtgtaacacaaggcccagttc |
36100113 |
T |
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| Q |
119 |
ctaaagctctaatttgtagcttcagtcctgttgttattttccaccgttcaattgtctaattgtatgccatttttaaacacatgcttaattctctacattg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36100114 |
ctaaagctctaatttgtagcttcagtcctgttgttattttccaccgttaaattgtctaattgtatgccatttttaaacacatgcttaattctctacattg |
36100213 |
T |
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| Q |
219 |
gttaacagatttctatcataagtattcatgtata |
252 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
36100214 |
gttaacagatttctatcataagtattcatgtata |
36100247 |
T |
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