View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14777_low_8 (Length: 330)
Name: NF14777_low_8
Description: NF14777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14777_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 163; Significance: 5e-87; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 136 - 322
Target Start/End: Original strand, 47838213 - 47838398
Alignment:
| Q |
136 |
ttaatatatacattgcatcttgattccagttttgattttttcacttatttattttaaaagatgaaattctaactgttaatatgttttataaaagataaag |
235 |
Q |
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| T |
47838213 |
ttaatatatacattgcatcttgattccagttttgattttttcacttatttattttaaaagatgaaattctaacagttaatatgttttataaaagataaag |
47838312 |
T |
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| Q |
236 |
agttgaattttataagctttaaaatgggaagagccagccaacccaacaatcttcaaaagtaaagcttaaaacaaattttgatgatgt |
322 |
Q |
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| T |
47838313 |
agttgaattttataagctttaaaatgggaagagtcagccaaccc-ataatcttcaaaagtaaagcttaaaacaaattttgataatgt |
47838398 |
T |
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