View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14778_high_14 (Length: 278)
Name: NF14778_high_14
Description: NF14778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14778_high_14 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 38753117 - 38752859
Alignment:
| Q |
19 |
gtaccctatatacataattcttgagaaacagaaaagacaagagccaatagctagatccaatcatcaaacaaaatgggtttggttaatgctatctcttaat |
118 |
Q |
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| T |
38753117 |
gtaccctatatacataattcttgagaaacagaaaagacaagagccaatagctagatccaatcatcaaacaaaatgggtttggttaatgctatctcttaat |
38753018 |
T |
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| Q |
119 |
tttgtcacataaggatgtttttaaataagaatctcattttctaacaaataaaaatttggtgatatagttttatatgaaataaaataattaacatgtaggc |
218 |
Q |
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| T |
38753017 |
tttgtcacataaggatgtttttaaataagaatctcattttctaacaaataaaattttggtgatatagttttatatgaaataaaataattaacatgtaggc |
38752918 |
T |
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| Q |
219 |
cattaagggaaccttatgtaattaaaatattcatcgttctaataatcttccctttcctct |
278 |
Q |
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| T |
38752917 |
cattaagggaaccttatgaaatt-aaatattcatcgttctaataatcttccctttcctct |
38752859 |
T |
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