View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14780_low_13 (Length: 375)

Name: NF14780_low_13
Description: NF14780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14780_low_13
NF14780_low_13
[»] chr3 (50 HSPs)
chr3 (1-359)||(4536818-4537179)
chr3 (6-170)||(46421054-46421218)
chr3 (6-170)||(8247706-8247870)
chr3 (1-169)||(29366734-29366902)
chr3 (1-170)||(13628804-13628974)
chr3 (1-170)||(13730616-13730785)
chr3 (1-170)||(40272826-40272993)
chr3 (4-170)||(9607179-9607345)
chr3 (1-170)||(1217066-1217231)
chr3 (1-170)||(6411836-6412002)
chr3 (80-170)||(10870042-10870132)
chr3 (1-170)||(22609743-22609908)
chr3 (1-136)||(516419-516555)
chr3 (8-170)||(12914056-12914216)
chr3 (5-171)||(52926237-52926392)
chr3 (1-170)||(5173733-5173902)
chr3 (1-147)||(34420657-34420802)
chr3 (113-170)||(7697009-7697066)
chr3 (1-170)||(16735417-16735583)
chr3 (7-135)||(45139497-45139624)
chr3 (1-96)||(45786228-45786323)
chr3 (1-103)||(10795437-10795539)
chr3 (1-170)||(26573104-26573270)
chr3 (1-50)||(54484785-54484834)
chr3 (78-170)||(4495753-4495845)
chr3 (1-170)||(39203492-39203657)
chr3 (1-104)||(49013487-49013590)
chr3 (1-87)||(353363-353449)
chr3 (1-103)||(14987000-14987102)
chr3 (1-157)||(26869696-26869849)
chr3 (1-50)||(31592941-31592990)
chr3 (6-50)||(10300585-10300629)
chr3 (126-169)||(25517310-25517353)
chr3 (79-170)||(45620919-45621009)
chr3 (1-148)||(53996579-53996725)
chr3 (4-51)||(54374362-54374409)
chr3 (1-51)||(829456-829506)
chr3 (1-51)||(25517184-25517234)
chr3 (5-51)||(25944563-25944609)
chr3 (62-144)||(39211992-39212074)
chr3 (1-47)||(45948852-45948898)
chr3 (1-35)||(47624208-47624242)
chr3 (1-50)||(7943084-7943133)
chr3 (8-170)||(12525386-12525543)
chr3 (126-167)||(21874999-21875040)
chr3 (1-50)||(24851315-24851364)
chr3 (1-50)||(34771378-34771427)
chr3 (1-29)||(4495690-4495718)
chr3 (1-29)||(10484630-10484658)
chr3 (1-29)||(54032585-54032613)
[»] chr1 (53 HSPs)
chr1 (3-172)||(46247969-46248136)
chr1 (1-170)||(20004104-20004273)
chr1 (7-170)||(18944620-18944783)
chr1 (1-164)||(30395740-30395903)
chr1 (1-170)||(27201624-27201793)
chr1 (1-170)||(10668197-10668371)
chr1 (1-167)||(23768334-23768498)
chr1 (1-170)||(34725112-34725277)
chr1 (1-170)||(14617015-14617182)
chr1 (1-170)||(32632571-32632737)
chr1 (1-165)||(18741971-18742137)
chr1 (1-147)||(19701570-19701715)
chr1 (1-170)||(46991781-46991948)
chr1 (1-131)||(35005139-35005269)
chr1 (3-170)||(8197020-8197185)
chr1 (1-148)||(35117779-35117927)
chr1 (1-151)||(6925096-6925244)
chr1 (16-170)||(19932782-19932933)
chr1 (1-170)||(38478296-38478461)
chr1 (1-170)||(47214488-47214653)
chr1 (1-170)||(27474258-27474424)
chr1 (1-50)||(45402191-45402240)
chr1 (1-57)||(42304221-42304277)
chr1 (80-170)||(22930158-22930248)
chr1 (1-47)||(33594145-33594191)
chr1 (1-170)||(41319820-41319987)
chr1 (1-50)||(4349733-4349782)
chr1 (1-164)||(12126851-12127010)
chr1 (113-170)||(34714600-34714657)
chr1 (1-57)||(50606491-50606547)
chr1 (1-166)||(19414420-19414581)
chr1 (113-168)||(40424721-40424776)
chr1 (1-170)||(45812551-45812716)
chr1 (98-172)||(25290138-25290212)
chr1 (1-51)||(45264413-45264463)
chr1 (1-164)||(9939443-9939608)
chr1 (62-170)||(4430099-4430207)
chr1 (3-51)||(6358216-6358264)
chr1 (1-57)||(22324982-22325037)
chr1 (80-160)||(33222971-33223051)
chr1 (3-51)||(41440618-41440666)
chr1 (1-47)||(1517325-1517371)
chr1 (7-136)||(11596524-11596650)
chr1 (78-148)||(18724634-18724704)
chr1 (1-47)||(43768237-43768283)
chr1 (1-50)||(4587577-4587626)
chr1 (1-50)||(23796560-23796609)
chr1 (1-50)||(30555210-30555259)
chr1 (1-34)||(35019340-35019373)
chr1 (1-50)||(35253201-35253250)
chr1 (128-165)||(45402077-45402114)
chr1 (1-161)||(2435800-2435958)
chr1 (7-55)||(30682902-30682950)
[»] chr2 (45 HSPs)
chr2 (1-170)||(14530272-14530441)
chr2 (1-169)||(10543653-10543821)
chr2 (1-168)||(11514392-11514556)
chr2 (1-170)||(8455330-8455497)
chr2 (1-169)||(24200637-24200805)
chr2 (1-171)||(9671133-9671300)
chr2 (1-170)||(7214488-7214657)
chr2 (1-170)||(25079731-25079899)
chr2 (80-170)||(12024009-12024099)
chr2 (4-146)||(31158456-31158598)
chr2 (1-169)||(14544018-14544187)
chr2 (79-168)||(19977804-19977893)
chr2 (1-170)||(21779275-21779440)
chr2 (1-170)||(23397720-23397885)
chr2 (4-56)||(19185760-19185812)
chr2 (1-57)||(23488548-23488604)
chr2 (1-171)||(5840981-5841151)
chr2 (1-50)||(10546235-10546284)
chr2 (1-50)||(14444800-14444849)
chr2 (1-168)||(17896215-17896381)
chr2 (1-50)||(44643595-44643644)
chr2 (1-152)||(17667974-17668123)
chr2 (126-170)||(39189558-39189602)
chr2 (3-50)||(99281-99328)
chr2 (113-172)||(17705447-17705506)
chr2 (1-167)||(25249752-25249915)
chr2 (7-169)||(32781308-32781467)
chr2 (1-103)||(40762248-40762348)
chr2 (1-47)||(34766330-34766376)
chr2 (1-50)||(24860002-24860051)
chr2 (1-50)||(30826108-30826156)
chr2 (1-50)||(31523303-31523352)
chr2 (126-170)||(22371011-22371055)
chr2 (117-164)||(27573581-27573628)
chr2 (1-48)||(40579763-40579810)
chr2 (1-35)||(124928-124962)
chr2 (1-35)||(22371199-22371233)
chr2 (1-47)||(24890486-24890532)
chr2 (126-175)||(27466267-27466316)
chr2 (7-48)||(33795359-33795400)
chr2 (1-50)||(36871564-36871612)
chr2 (3-75)||(45235833-45235903)
chr2 (1-37)||(8575980-8576016)
chr2 (1-152)||(17623536-17623685)
chr2 (1-29)||(39914320-39914348)
[»] chr5 (36 HSPs)
chr5 (1-170)||(38879535-38879704)
chr5 (1-167)||(4619118-4619284)
chr5 (1-167)||(43334159-43334325)
chr5 (1-170)||(24448844-24449011)
chr5 (1-167)||(27328709-27328875)
chr5 (1-170)||(41014273-41014439)
chr5 (1-159)||(12006342-12006500)
chr5 (1-170)||(22187239-22187408)
chr5 (1-170)||(8169998-8170163)
chr5 (81-170)||(35710267-35710356)
chr5 (81-170)||(37024646-37024735)
chr5 (113-170)||(1565385-1565442)
chr5 (1-50)||(16957386-16957435)
chr5 (1-49)||(25622533-25622581)
chr5 (1-47)||(39801591-39801637)
chr5 (6-51)||(10306493-10306538)
chr5 (1-34)||(18684361-18684394)
chr5 (5-50)||(43574678-43574723)
chr5 (126-170)||(19438703-19438747)
chr5 (126-170)||(22600408-22600452)
chr5 (126-169)||(2838733-2838776)
chr5 (1-96)||(13801781-13801876)
chr5 (79-170)||(23974735-23974825)
chr5 (1-40)||(31694122-31694161)
chr5 (1-47)||(5873336-5873382)
chr5 (1-51)||(21784346-21784396)
chr5 (1-50)||(7097774-7097823)
chr5 (1-50)||(19142957-19143006)
chr5 (114-167)||(22861791-22861844)
chr5 (3-148)||(28516449-28516593)
chr5 (124-165)||(31299591-31299632)
chr5 (1-50)||(32703494-32703543)
chr5 (1-87)||(42924844-42924932)
chr5 (1-29)||(13774958-13774986)
chr5 (1-37)||(32354212-32354248)
chr5 (1-161)||(39301087-39301244)
[»] chr8 (40 HSPs)
chr8 (1-170)||(36720750-36720917)
chr8 (1-170)||(39461008-39461177)
chr8 (1-170)||(28817640-28817807)
chr8 (1-170)||(44530103-44530270)
chr8 (1-170)||(7136541-7136710)
chr8 (1-170)||(12670264-12670429)
chr8 (1-170)||(30454111-30454276)
chr8 (1-170)||(17823530-17823697)
chr8 (1-170)||(26954086-26954256)
chr8 (1-170)||(29521699-29521866)
chr8 (1-170)||(35261633-35261800)
chr8 (1-170)||(6760777-6760945)
chr8 (1-166)||(20284083-20284250)
chr8 (1-170)||(2626473-2626643)
chr8 (1-166)||(21070711-21070879)
chr8 (1-170)||(45071219-45071385)
chr8 (2-170)||(13160656-13160821)
chr8 (31-169)||(11748254-11748392)
chr8 (1-161)||(44781518-44781677)
chr8 (1-165)||(8897778-8897940)
chr8 (81-170)||(20869588-20869677)
chr8 (6-170)||(24245405-24245565)
chr8 (1-152)||(12625861-12626011)
chr8 (1-57)||(16013521-16013577)
chr8 (1-96)||(16225047-16225142)
chr8 (80-170)||(18164850-18164940)
chr8 (1-166)||(25250480-25250645)
chr8 (80-161)||(28407379-28407460)
chr8 (1-50)||(29877166-29877215)
chr8 (5-131)||(8483956-8484080)
chr8 (127-170)||(23286431-23286474)
chr8 (1-36)||(27468106-27468141)
chr8 (1-35)||(18164774-18164808)
chr8 (1-87)||(20869960-20870046)
chr8 (1-47)||(27507985-27508031)
chr8 (128-170)||(40605044-40605086)
chr8 (1-50)||(5689703-5689752)
chr8 (1-50)||(26102589-26102638)
chr8 (1-50)||(28407475-28407524)
chr8 (1-50)||(31457244-31457293)
[»] chr4 (60 HSPs)
chr4 (1-163)||(16408615-16408777)
chr4 (4-167)||(16911519-16911682)
chr4 (1-167)||(54730206-54730373)
chr4 (1-170)||(5648213-5648379)
chr4 (5-170)||(6430644-6430806)
chr4 (1-170)||(21646918-21647087)
chr4 (1-170)||(23501747-23501910)
chr4 (1-151)||(44363144-44363294)
chr4 (1-148)||(35567146-35567291)
chr4 (1-170)||(11054162-11054327)
chr4 (1-170)||(20224938-20225103)
chr4 (1-170)||(48598839-48599004)
chr4 (1-170)||(30639334-30639500)
chr4 (1-151)||(40915802-40915949)
chr4 (1-103)||(20639672-20639773)
chr4 (81-170)||(5306755-5306844)
chr4 (1-170)||(20405047-20405210)
chr4 (1-170)||(47528544-47528709)
chr4 (113-167)||(5313118-5313172)
chr4 (3-167)||(14983791-14983953)
chr4 (1-165)||(30352594-30352767)
chr4 (126-170)||(10660358-10660402)
chr4 (126-170)||(10874503-10874547)
chr4 (114-166)||(14590795-14590847)
chr4 (5-149)||(25343162-25343306)
chr4 (1-49)||(33836501-33836549)
chr4 (1-49)||(38755922-38755970)
chr4 (5-48)||(44718641-44718684)
chr4 (1-52)||(47482864-47482915)
chr4 (71-161)||(487217-487306)
chr4 (113-167)||(17315422-17315476)
chr4 (1-51)||(20908650-20908700)
chr4 (7-136)||(25463110-25463237)
chr4 (1-47)||(30690190-30690236)
chr4 (1-50)||(11394924-11394973)
chr4 (1-50)||(11404651-11404700)
chr4 (98-170)||(55766574-55766647)
chr4 (1-49)||(8820581-8820629)
chr4 (126-170)||(13256534-13256578)
chr4 (127-167)||(18969698-18969738)
chr4 (1-37)||(35532077-35532113)
chr4 (1-37)||(40553951-40553987)
chr4 (1-49)||(50555670-50555718)
chr4 (6-144)||(17043413-17043549)
chr4 (1-48)||(32484307-32484354)
chr4 (3-57)||(16494284-16494338)
chr4 (1-75)||(20225123-20225197)
chr4 (1-51)||(21489159-21489209)
chr4 (1-170)||(37494805-37494972)
chr4 (5-51)||(49938611-49938657)
chr4 (128-170)||(55830860-55830902)
chr4 (1-149)||(19027823-19027969)
chr4 (1-50)||(25629121-25629170)
chr4 (1-50)||(28494223-28494272)
chr4 (1-50)||(29207912-29207961)
chr4 (1-50)||(38786681-38786730)
chr4 (1-50)||(51865052-51865101)
chr4 (1-49)||(25388249-25388297)
chr4 (3-51)||(36816400-36816448)
chr4 (1-49)||(55830735-55830783)
[»] chr7 (44 HSPs)
chr7 (1-170)||(42805478-42805647)
chr7 (1-170)||(42798623-42798790)
chr7 (1-170)||(2541033-2541201)
chr7 (1-170)||(22698981-22699151)
chr7 (7-170)||(43557426-43557589)
chr7 (1-171)||(47716412-47716582)
chr7 (1-166)||(14732835-14732999)
chr7 (1-170)||(48735136-48735302)
chr7 (1-170)||(21172023-21172188)
chr7 (1-169)||(5180169-5180337)
chr7 (1-163)||(11617602-11617762)
chr7 (1-170)||(32758215-32758380)
chr7 (1-170)||(42476827-42476992)
chr7 (16-170)||(46354148-46354302)
chr7 (1-161)||(23419688-23419845)
chr7 (1-163)||(10693087-10693245)
chr7 (1-164)||(40463837-40463997)
chr7 (113-170)||(7193039-7193096)
chr7 (80-169)||(18326989-18327078)
chr7 (113-170)||(47077977-47078034)
chr7 (1-53)||(45018937-45018989)
chr7 (1-159)||(19426904-19427059)
chr7 (1-170)||(35334830-35334995)
chr7 (1-162)||(27629596-27629755)
chr7 (80-170)||(42495926-42496016)
chr7 (2-75)||(33500562-33500635)
chr7 (1-87)||(7879675-7879759)
chr7 (1-150)||(33871924-33872070)
chr7 (8-148)||(19266426-19266564)
chr7 (126-167)||(25198679-25198720)
chr7 (1-34)||(36602535-36602568)
chr7 (1-49)||(18512467-18512515)
chr7 (1-57)||(39123960-39124016)
chr7 (1-37)||(42495876-42495912)
chr7 (2-57)||(3469190-3469245)
chr7 (7-50)||(27889336-27889379)
chr7 (7-161)||(28362165-28362316)
chr7 (4-170)||(34626225-34626388)
chr7 (79-165)||(7794596-7794682)
chr7 (11-148)||(14099030-14099165)
chr7 (11-148)||(14409047-14409182)
chr7 (126-171)||(2663068-2663113)
chr7 (1-50)||(42391114-42391163)
chr7 (1-29)||(25434113-25434141)
[»] chr6 (27 HSPs)
chr6 (7-160)||(12221935-12222088)
chr6 (1-170)||(29355869-29356039)
chr6 (1-170)||(1346918-1347083)
chr6 (1-172)||(1354771-1354938)
chr6 (1-168)||(3815091-3815256)
chr6 (1-57)||(12885978-12886034)
chr6 (1-170)||(9161077-9161245)
chr6 (9-152)||(14553484-14553626)
chr6 (114-170)||(8409197-8409253)
chr6 (4-50)||(32579497-32579543)
chr6 (1-49)||(6808468-6808516)
chr6 (1-65)||(12892066-12892130)
chr6 (78-170)||(14975169-14975261)
chr6 (62-166)||(20400625-20400729)
chr6 (67-167)||(32728234-32728334)
chr6 (3-50)||(24097649-24097696)
chr6 (6-37)||(29016301-29016332)
chr6 (126-172)||(1941807-1941853)
chr6 (116-170)||(33922955-33923009)
chr6 (4-57)||(3116146-3116199)
chr6 (115-152)||(8417444-8417481)
chr6 (4-37)||(10734922-10734955)
chr6 (1-50)||(13267797-13267846)
chr6 (117-166)||(24734591-24734640)
chr6 (1-165)||(2166424-2166587)
chr6 (1-165)||(2178057-2178220)
chr6 (113-169)||(13905103-13905158)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-165)||(58936-59100)
[»] scaffold0057 (3 HSPs)
scaffold0057 (1-170)||(24786-24948)
scaffold0057 (1-161)||(46794-46952)
scaffold0057 (1-51)||(46721-46771)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-168)||(13038-13202)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-170)||(30533-30698)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-161)||(10773-10931)
[»] scaffold0024 (1 HSPs)
scaffold0024 (98-170)||(83829-83901)
[»] scaffold0187 (4 HSPs)
scaffold0187 (81-167)||(10140-10226)
scaffold0187 (81-167)||(20468-20554)
scaffold0187 (116-170)||(8899-8953)
scaffold0187 (116-170)||(19227-19281)
[»] scaffold0005 (1 HSPs)
scaffold0005 (114-166)||(226531-226583)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-163)||(11093-11250)
[»] scaffold1176 (1 HSPs)
scaffold1176 (1-50)||(1601-1650)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-50)||(24147-24196)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-50)||(72881-72930)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-50)||(48648-48697)


Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 359
Target Start/End: Complemental strand, 4537179 - 4536818
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttaca---aaagtggcta 97  Q
    |||| ||||||| ||||||||| ||||| ||||||||||| | | |||||||  ||| ||||||| ||||||||||||||||||  |   |||  ||||     
T  4537179 tgcattaaagcttccgcatacgtagggtttgggaaggagtcctatcatttttgatgtattatacgcagtcttacctagttttttttataaaaaaaggctg 4537080  T
Q  98 tttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctcgtttagcggaatgattattgaaatata 197  Q
    |||||||||||||| |||||||| ||| | ||||||||||||||| |||||  ||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  4537079 tttccaaaacttaaacccgtgacctttcaatcacatgaccacaacattaccgattatgccaaggttacccctcatttagtggaatgattattgaaatata 4536980  T
Q  198 ataaatgtctttgatagaaactttacaccttcatcaaaatttcctctaactactacaaaacctgattattcgctatgtattatatgcaccaacactaaaa 297  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  4536979 ataaatgtctttgatagaaactttacaccttcatcaaattttcctctaactactataaaacctgattattcgctatgtattatatgcaccaacactaaag 4536880  T
Q  298 tcacttcttaatatggcttcattttacctatccttactattgttgttccttgctgctcttat 359  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4536879 tcacttcttaaaatggcttcattttacctatccttactattgttgttccttgctgcccttat 4536818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 46421054 - 46421218
Alignment:
Q  6 taaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaa 105  Q
    |||||||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||| |||| ||||||      
T  46421054 taaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccagg 46421153  T
Q  106 acttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||| | |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  46421154 acttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttacccctc 46421218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 8247706 - 8247870
Alignment:
Q  6 taaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaa 105  Q
    |||||||||||||||||||||||| |||||||||| |||||||| || |||| || |||| |  ||||||  |||||||||| ||| |||| ||||||      
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccagg 8247805  T
Q  106 acttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  8247806 acttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 8247870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29366734 - 29366902
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||| ||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||| | ||| |||| |||    
T  29366734 tgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgttt 29366833  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccct 169  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  29366834 ccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttacgccaaggttacccct 29366902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 13628804 - 13628974
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||| ||||| ||| |||| |||    
T  13628804 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagaggctgttt 13628903  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaac-tttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||| ||||||||||  ||||||||||||||||    
T  13628904 ccaggacttgaacccgtgacctttcagtcacatgacaacaacttttaccagttgtgccaaggttacccctc 13628974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 13730616 - 13730785
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||  || ||||||  |||||||||| ||| |||| |||    
T  13730616 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgttt 13730715  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  13730716 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 13730785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 40272826 - 40272993
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||  ||| |||| || |||| || ||||||  |||||||||| ||| || | |||    
T  40272826 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgttttttacacaagaggttgttt 40272923  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | ||| |||| ||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  40272924 ccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 40272993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 9607345 - 9607179
Alignment:
Q  4 actaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttcca 103  Q
    ||||||||||||||||| || ||||||||||||| || ||| |||| || |||| || |||| || ||||||  |||||||||  ||| |||| ||||||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttcca 9607246  T
Q  104 aaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
      |||| | ||  |||| ||| ||||||||||| |||||||||| |||| |||||||||||||||||    
T  9607245 ggacttgaaccgatgacctttcagtcacatgacaacaactttacaagttgcgccaaggttacccctc 9607179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 1217231 - 1217066
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || || ||||||   |||| || |||| || ||||||  |||||  ||| ||| |||| |||    
T  1217231 tgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgttt 1217136  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||| ||||||| ||||||||||||||| |||||||||||||||||    
T  1217135 ccaggacttgaacccgtgacctttcagtgacatgactacaactttaccagttgcgccaaggttacccctc 1217066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 6411836 - 6412002
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||||||| |||||||||||| || ||| ||  ||| |||| || |||| || ||||||  | |||||||| ||| |||| |||    
T  6411836 tgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatca--tttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgttt 6411932  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
     ||| |||| | ||| |||| | | ||| ||||||| ||||||||||||||| || ||||||||||||||    
T  6411933 acaagacttgaacccatgacctatcagttacatgacaacaactttaccagttgcgtcaaggttacccctc 6412002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 10870042 - 10870132
Alignment:
Q  80 tttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||||| ||| |||| ||||||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  10870042 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 10870132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 22609908 - 22609743
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||| ||||||||||||||||| |||| ||||||| || ||||||  ||| |||| || |||| || ||||||  | |||||||| ||| |||| |||    
T  22609908 tgcactgaagctcccgcatacgcaaggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgttt 22609812  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||| |||| | ||||| || ||  ||||||||||| ||||||||||| ||| |||||||||||||||||    
T  22609811 ccaagacttgaacccgttaccttacagtcacatgacaacaactttacc-gttgcgccaaggttacccctc 22609743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 516555 - 516419
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttg-tgtgttatacgtagtcttacctagttttttacaaaagtggctatt 99  Q
    ||||||||||||||||||||||||||||| ||||||| || || |||||||||| | | || | || || ||||||  |||||||||| ||| |||| ||    
T  516555 tgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttacacaagaggctgtt 516456  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgac 136  Q
    ||||  |||| | |||||||| ||| |||||||||||    
T  516455 tccaggacttgaacccgtgacctttcagtcacatgac 516419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 170
Target Start/End: Original strand, 12914056 - 12914216
Alignment:
Q  8 aagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaac 107  Q
    ||||||||||||| |||||||||||||||| ||  ||||||||   |||| || ||||  | ||||||  |||||||||| ||| |||| ||||||  ||    
T  12914056 aagctcccgcatatgcagggtctgggaaggggtctcaccatttg--gtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggac 12914153  T
Q  108 ttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    || | |  ||||| |||  ||||||| || ||||||||||||||| |||||||||||||||||    
T  12914154 ttgaacttgtgacctttcggtcacattacaacaactttaccagttgcgccaaggttacccctc 12914216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 52926237 - 52926392
Alignment:
Q  5 ctaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaa 104  Q
    ||||||||||||||||||||||||| ||||||| || |||||||||   |||| || |||| || |||||         |||| ||| |||| ||||||     
T  52926237 ctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttg--gtgtattgtacgcagccttac---------tacacaagaggctgtttccag 52926325  T
Q  105 aacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctcg 171  Q
     |||| | |||||||| ||  ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  52926326 gacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctcg 52926392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 5173733 - 5173902
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||||||| |||| ||||||| |  ||||||||||| |||| ||  | | |  ||||| | | |||||||| ||| || | |||    
T  5173733 tgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttg-tttttacacaagaggttgttt 5173831  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaac-tttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||| ||||| |||| |||||||||||||||||    
T  5173832 ccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgccaaggttacccctc 5173902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 34420657 - 34420802
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||| |||||||| |||| ||||||| || |||||| |||| |||| |  |||| || ||||||  |||||||||| ||| |||| |||    
T  34420657 tgcactaaagctcccacatacgcaaggtccgggaaggggtcccacca-ttttggtgtatggtacgcagccttaccctgttttttacacaagaggctgttt 34420755  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttac 147  Q
    |||  |||| | |||||||| ||| |||||| |||| ||||||||||    
T  34420756 ccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 7697009 - 7697066
Alignment:
Q  113 cccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  7697009 cccgtgaccttttagtcacatgacaacaactttaccagttgcgccaaggttacccctc 7697066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 16735583 - 16735417
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttt-tacaaaagtggctatt 99  Q
    |||||| ||||| |||||||||||| ||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||| ||||| ||  ||| ||    
T  16735583 tgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttttctacaagag--gctgtt 16735488  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    || |  |||| | |||||||| ||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  16735487 tcgaggacttgaacccgtgacgttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 16735417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 45139497 - 45139624
Alignment:
Q  7 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaa 106  Q
    |||| ||||||||||||||| |||||||||| || ||||||||||| |||| || || | || ||||||  || ||||||| ||| || | |||||||||    
T  45139497 aaagttcccgcatacgcagg-tctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaa 45139595  T
Q  107 cttaatcccgtgacatttaagtcacatga 135  Q
    ||| | |||||||| ||| ||||||||||    
T  45139596 cttgaacccgtgacctttcagtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 45786228 - 45786323
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggct 96  Q
    |||||||||||||| |||| ||||||||| ||||||| || ||||||||||| |||| || |||| || ||||||  |||||||||| ||| ||||    
T  45786228 tgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggct 45786323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 10795437 - 10795539
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||| ||||||||||||||||||||||  |||||| || ||||||||||| |||| || |||| || ||||||  || ||||||| ||| |||| |||    
T  10795437 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgttt 10795536  T
Q  101 cca 103  Q
    |||    
T  10795537 cca 10795539  T

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Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 26573270 - 26573104
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||| ||||||||||||||| |||| || || ||||||   || |||| || |||| || ||||||  |||||||||| | | |||| |||    
T  26573270 tgcactaaagctcacgcatacgcagggtccgggatggggtcccacca--attggtgtattgtacgcagccttaccctgttttttacacaggaggctgttt 26573173  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| |||||| |||| ||||||||||| ||| |||||||| | ||||||    
T  26573172 ccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagggtccccctc 26573104  T

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Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 54484834 - 54484785
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  54484834 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 54484785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 4495753 - 4495845
Alignment:
Q  78 gttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||||||| ||  |||||||| ||  |||| | |||||||| ||  ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  4495753 gttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcgaaggttacccctc 4495845  T

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Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 39203657 - 39203492
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| ||| |||| ||||||| || |||||||||   |||| || |||| |  ||||||  |||||  ||| ||| |||| |||    
T  39203657 tgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttg--gtgtattgtacgcaaccttaccctgtttt--acacaagaggctgttt 39203562  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    | |  |||| | || ||||| ||| ||||||||||| |||||||||| ||||  ||||||||||||||||    
T  39203561 caaggacttgaacctgtgacctttcagtcacatgacaacaactttacaagttgtgccaaggttacccctc 39203492  T

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Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 49013487 - 49013590
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||| || || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||| |||| |||    
T  49013487 tgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 49013586  T
Q  101 ccaa 104  Q
    ||||    
T  49013587 ccaa 49013590  T

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Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 353363 - 353449
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttaca 87  Q
    |||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  ||||||||||    
T  353363 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 353449  T

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Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 14987102 - 14987000
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| ||| |||| ||||| | || |||||||| || |||| || |||| || ||||||  |||||||||| ||| |||| |||    
T  14987102 tgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 14987003  T
Q  101 cca 103  Q
    |||    
T  14987002 cca 14987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 26869849 - 26869696
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||| |||||||||||||||||| |||| || |||| || |||||||||   |||| || |||| || ||||||  |||||| |||  || |||| |||    
T  26869849 tgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acaccagaggctgttt 26869753  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgcc 157  Q
    |||  |||| | || ||||| ||| ||||||||||| ||||||||||||||| ||||    
T  26869752 ccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

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Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31592990 - 31592941
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||| |||||||||||| |||||||| |||||||||| |||||||||    
T  31592990 tgcactagagctcccgcatatgcagggtccgggaaggagtcccaccattt 31592941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 10300629 - 10300585
Alignment:
Q  6 taaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||    
T  10300629 taaagctcccgcatacgtagggtctgggaaggagtcccatcattt 10300585  T

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Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 25517310 - 25517353
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttacccct 169  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  25517310 agtcacatgacaacaactttaccagttgcgccaaggttatccct 25517353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 45620919 - 45621009
Alignment:
Q  79 ttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||||| ||| |||| |||||| ||||| | |||||||| ||| |||||| |||| ||||||||||| ||| |||||||| | ||||||    
T  45620919 ttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaaggctccccctc 45621009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 53996579 - 53996725
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||| ||||||||| ||| ||||||| || |||||| |||| |||| || || | || ||||||  |||||||||| ||| || | |||    
T  53996579 tgcactaaagctcccacatacgcagtgtcagggaaggggtcccacca-ttttggtgtattgtaagcagccttaccctgttttttacacaagaggttgttt 53996677  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttacc 148  Q
    |||  |||| | | |||||| ||| ||||| ||||| |||| ||||||    
T  53996678 ccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 54374362 - 54374409
Alignment:
Q  4 actaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    ||||||||||||||||| |||||||| ||||||| || ||||||||||    
T  54374362 actaaagctcccgcatatgcagggtccgggaaggggtcccaccatttt 54374409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 829456 - 829506
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    |||||||||||||| |||||||||||||  ||||||| || ||||||||||    
T  829456 tgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccatttt 829506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25517184 - 25517234
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    |||||||||||||| ||||||||||| || ||||||| || ||||||||||    
T  25517184 tgcactaaagctccagcatacgcaggatccgggaaggggtcccaccatttt 25517234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 25944609 - 25944563
Alignment:
Q  5 ctaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    ||||||||||| ||||||||||||| ||||||| || ||||||||||    
T  25944609 ctaaagctcccacatacgcagggtcagggaaggggtcccaccatttt 25944563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 39212074 - 39211992
Alignment:
Q  62 tacgtagtcttacctagttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactt 144  Q
    |||| |||||||||| ||| |||||| ||| || ||||||||  |||| | |||||||||||| |||||||| || |||||||    
T  39212074 tacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttcagtcacataacgacaactt 39211992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 45948852 - 45948898
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 47  Q
    ||||||||||||||||||||||||||||| | ||||| || ||||||    
T  45948852 tgcactaaagctcccgcatacgcagggtccgagaaggggtcccacca 45948898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 47624242 - 47624208
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaa 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  47624242 tgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7943133 - 7943084
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||||||||||||||||||||| ||||||| ||||  | |||||||||    
T  7943133 tgcactaaagctcccgcatacgcatggtctggaaagggatcccaccattt 7943084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 12525543 - 12525386
Alignment:
Q  8 aagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaac 107  Q
    ||||||||| |||| |||||||| |||||| || ||||||||||| ||||  |   || || ||||||  | |||||||| ||| |||| ||||||  ||    
T  12525543 aagctcccgtatacacagggtctaggaaggtgtcccaccatttttggtgtactt--cgcagccttaccctgatttttacacaagaggctgtttccaggac 12525446  T
Q  108 ttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |  | || ||||| ||| ||||| |||||   ||||||||||||| |||||||||||||||||    
T  12525445 tcgaacctgtgacctttcagtcatatgac---aactttaccagttgcgccaaggttacccctc 12525386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 21875040 - 21874999
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    ||||||||||| ||||||||||||||| || |||||||||||    
T  21875040 agtcacatgacaacaactttaccagttgcgtcaaggttaccc 21874999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24851315 - 24851364
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||||||||||||||||| ||||| || ||||||| || |||||||||    
T  24851315 tgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccattt 24851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34771378 - 34771427
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  34771378 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 34771427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 4495690 - 4495718
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtc 29  Q
    |||||||||||||||||||||||||||||    
T  4495690 tgcactaaagctcccgcatacgcagggtc 4495718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 10484630 - 10484658
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtc 29  Q
    |||||||||||||||||||||||||||||    
T  10484630 tgcactaaagctcccgcatacgcagggtc 10484658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 54032585 - 54032613
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtc 29  Q
    |||||||||||||||||||||||||||||    
T  54032585 tgcactaaagctcccgcatacgcagggtc 54032613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 46247969 - 46248136
Alignment:
Q  3 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttcc 102  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||||   |||| || |||| |||||||||  |||||||||| ||| |||| |||||    
T  46247969 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttcc 46248066  T
Q  103 aaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctcgt 172  Q
    || |||| | |||||||||||| ||||||||||| |||||||||||||||  ||||||||||||||||||    
T  46248067 aagacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgagccaaggttacccctcgt 46248136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 20004104 - 20004273
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| || ||||||||||||| || |||||||| || |||| || |||| || ||||||| ||||||||||  || |||| |||    
T  20004104 tgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacgagaggctgttt 20004203  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||  ||||||||||| ||||||||||||||| | |||||||||||||||    
T  20004204 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 20004273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 170
Target Start/End: Complemental strand, 18944783 - 18944620
Alignment:
Q  7 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaa 106  Q
    ||||||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||| |||| ||||||       
T  18944783 aaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggc 18944684  T
Q  107 cttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||| | || ||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  18944683 cttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 18944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 30395740 - 30395903
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||| |||| |||    
T  30395740 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 30395839  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggtta 164  Q
    |||  |||| | |||||||| || |||||||||||| ||||||||||||||| |||||||||||    
T  30395840 ccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 27201793 - 27201624
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||||||| |||| ||||||| || ||||||||||| |||| || |||| || ||||||  |||| | ||| ||| |||| |||    
T  27201793 tgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgttt 27201694  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | ||| |||| ||| ||||||||||| |||||||||||| |||||| |||||||||||||    
T  27201693 ccaggacttgaacccatgacctttcagtcacatgacaacaactttaccatttacgctaaggttacccctc 27201624  T

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Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 10668371 - 10668197
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||| | ||||||| || |||||||| || |||| || |||| |  ||||||| |||||||||| ||| |||| |||    
T  10668371 tgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttacacaagaggctgttt 10668272  T
Q  101 ccaaaacttaatcccgtgacatttaag-----tcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||     ||||||||| ||||||||||||||| |||||||||||||||||    
T  10668271 ccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgccaaggttacccctc 10668197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 23768334 - 23768498
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||  ||| |||| || |||| || ||||||  |||||||||| ||| |||| |||    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccacca--tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 23768431  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    |||  |||| | || ||||| ||  ||||||||||| ||||||||||||||| || | |||||||||    
T  23768432 ccatgacttgaacctgtgaccttacagtcacatgacaacaactttaccagttgcgtcgaggttaccc 23768498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 34725112 - 34725277
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| ||| |||| |||    
T  34725112 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattta--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgttt 34725207  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  34725208 ccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 34725277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 14617182 - 14617015
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| |||||||| |||||||  | |||||||||   |||| || |||| |  ||||||| ||| |||||| ||| |||| |||    
T  14617182 tgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttg--gtgtattgtacgcaaccttaccttgttatttacacaagaggctgttt 14617085  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | | |||||| ||| ||||||||||| ||||||||||| ||| |||||||||||||||||    
T  14617084 ccaggacttgaactcgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttacccctc 14617015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 32632571 - 32632737
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||| ||||||||||||| ||||||| |||||||| || |||||||||   |||| || |||| || ||||||  |||||| ||| ||| |||| |||    
T  32632571 tgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagaggctgttt 32632667  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||| ||||| ||||||||||||||| |||||||||||||||||    
T  32632668 ccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttacccctc 32632737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 18741971 - 18742137
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttt---tacaaaagtggcta 97  Q
    ||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||| || |||| || ||||||  ||||||   |||||||  | ||     
T  18741971 tgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttatacaaaa--gactg 18742068  T
Q  98 ttt-ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttac 165  Q
    ||| |||| | || | ||| |||| ||| ||||||||||| ||||||||||||||| ||||||||||||    
T  18742069 tttcccaagatttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 18742137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 19701715 - 19701570
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| |  |||||| |||| |||| || |||  |  |||||| ||||||||||| ||| |||| |||    
T  19701715 tgcactaaagctcccgcatacgcagggtccgggaaggggccccacca-ttttggtgtattgtacccatccttaccaagttttttacacaagaggctgttt 19701617  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttac 147  Q
     ||  |||||| |||||||||||| ||||||| ||| ||||||||||    
T  19701616 tcatgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 46991948 - 46991781
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||| ||||||||||||| ||||||| || ||||||||    |||| || |||  || ||||||  |||||||||| ||| || | |||    
T  46991948 tgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcg--gtgtattgtacacagccttaccctgttttttacacaagaggttgttt 46991851  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||  ||||||||||| ||||||||||||||| | |||||||||||||||    
T  46991850 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 46991781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 35005269 - 35005139
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||| ||||||||||||||||| ||||||| || ||||||||||| |||| || || | || ||||||  |||||||||| ||| |||| |||    
T  35005269 tgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttacacaagaggctgttt 35005170  T
Q  101 ccaaaacttaatcccgtgacatttaagtcac 131  Q
     ||| |||| | |||||||| ||| ||||||    
T  35005169 tcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 8197185 - 8197020
Alignment:
Q  3 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttcc 102  Q
    ||||||||||||  ||||||||||||| | ||||| || | |||||||   ||||  | ||||||| ||||||  |||||||||| ||| ||| ||| ||    
T  8197185 cactaaagctccaacatacgcagggtccgagaaggggtcctaccatttg--gtgtactgtacgtagccttaccatgttttttacacaagaggcaattacc 8197088  T
Q  103 aaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |  |||| | |||||||| ||| ||||||||||| ||||||| ||||||| | |||||||||||||||    
T  8197087 aggacttgaacccgtgacctttcagtcacatgacaacaacttgaccagttgcaccaaggttacccctc 8197020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 35117779 - 35117927
Alignment:
Q  1 tgcactaaagctcccgcat-acgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatt 99  Q
    |||||||||||||| |||| |||||||||| ||||||| || ||| ||||||| |||| || |||  || ||||||  || ||||||| ||| |||||||    
T  35117779 tgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggctatt 35117878  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgaccacaactttacc 148  Q
    ||||  |||| | |||||||| ||| |||||| |||| |||||||||||    
T  35117879 tccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 6925244 - 6925096
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||| | ||||||| || ||||||||    |||| || | || || ||||||   ||||||||| ||| ||||||||    
T  6925244 tgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcg--gtgtattgtccgcagccttaccctattttttacacaagaggctattt 6925147  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagt 151  Q
    |||  |||| | |||||||| ||  ||||||||||| ||||||||||||||    
T  6925146 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 19932782 - 19932933
Alignment:
Q  16 gcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaacttaatccc 115  Q
    |||||||||||||| ||||||| || ||||||||||| |||| || |||| || ||||||  |||||||||| ||  || | | |||||  ||| | |||    
T  19932782 gcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaaa-ggttgtatccaa--cttgaaccc 19932878  T
Q  116 gtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
     |||| ||| ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  19932879 atgacctttcagtcacatgacaacaactttaccagttgcgccaaggtaacccctc 19932933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 38478296 - 38478461
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| | ||||| ||||||||||||   |||| || |||| || ||||||  |||||  ||| ||| |||| |||    
T  38478296 tgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgttt 38478391  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    | |  |||| | |||||||| ||| ||||||||||| |||| ||||| |||| |||||||||||||||||    
T  38478392 ctaggacttgaacccgtgacctttcagtcacatgacaacaagtttactagttgcgccaaggttacccctc 38478461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 47214653 - 47214488
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||||||||||| || |||||||||   |||| || |||| |  ||||||  |||||  |||| ||   || |||    
T  47214653 tgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttg--gtgtattgtacgcaaccttaccctgttttaaacaagaga--ctgttt 47214558  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||| ||||||||||    
T  47214557 ccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttacccctc 47214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 27474424 - 27474258
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||  ||  |||| || |||| ||  || ||  | |||||||| ||| | || |||    
T  27474424 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--ttcagtgtattgtacgcagctttgccctg-tttttacacaagagactgttt 27474328  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||| |||| | || ||||| ||| ||||||||||| |||||||||||||||  || |||||||||||||    
T  27474327 ccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgagctaaggttacccctc 27474258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 45402240 - 45402191
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||    
T  45402240 tgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccattt 45402191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42304221 - 42304277
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 57  Q
    ||||||||||||||| ||||||||||||| ||||||| || ||||||||||||||||    
T  42304221 tgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgt 42304277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 22930158 - 22930248
Alignment:
Q  80 tttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||||| ||  |||| ||||||  |||| | ||| |||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  22930158 tttttacacaaaaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 22930248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33594145 - 33594191
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 47  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||    
T  33594145 tgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca 33594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 41319820 - 41319987
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||| || |||||||||| | |||||  ||||||| || ||| |||||   |||| || |||| || ||||||  |||||||||| ||| | || |||    
T  41319820 tgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcatttg--gtgtattgtacgcagccttaccctgttttttacacaagagactgttt 41319917  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||||| || ||||| ||| ||||||||||| |||||||||||||||  | ||||||||||||||    
T  41319918 ccaggacttaaacctgtgacctttcagtcacatgacaacaactttaccagttgtgtcaaggttacccctc 41319987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4349782 - 4349733
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  4349782 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 4349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 12126851 - 12127010
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||| ||||   |||| || |||| || ||||||  |||||  ||| |||  ||| |||    
T  12126851 tgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaagctgttt 12126946  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggtta 164  Q
    ||| ||||||| |||||||| ||| | | ||||||| |||||||||| |||| |||||||||||    
T  12126947 ccagaacttaaacccgtgacctttcaattacatgacaacaactttacgagttgcgccaaggtta 12127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 34714657 - 34714600
Alignment:
Q  113 cccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||||| ||| | ||||||||| ||||||||||||||| |||||||||||||||||    
T  34714657 cccgtgacctttcaatcacatgacaacaactttaccagttgcgccaaggttacccctc 34714600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 50606547 - 50606491
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 57  Q
    |||||||||||||||||||| |||||||| ||||||| || ||||||||||| ||||    
T  50606547 tgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttttggtgt 50606491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 19414581 - 19414420
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||  ||||||| || |||||||||   |||| || |||| || |||| |  |||||  ||| ||| |||| |||    
T  19414581 tgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttg--gtgtattgtacgcagccttaacctgtttt--acataagaggctcttt 19414486  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacc 166  Q
    | |  |||| | |||||||| ||| ||||| ||||| |||||||||||| ||||||||||||||||    
T  19414485 ctaggacttgaacccgtgacctttcagtcatatgacaacaactttaccaattacgccaaggttacc 19414420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 40424776 - 40424721
Alignment:
Q  113 cccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccc 168  Q
    |||||| | ||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  40424776 cccgtggcctttcagtcacatgacaacaactttaccagttgcgccaaggttacccc 40424721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 45812551 - 45812716
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| ||||||| |||||||| || |||||||||   |||| || || | || ||||||   | ||||||| ||| | || |||    
T  45812551 tgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttg--gtgtattgtatgcagccttaccc--tcttttacacaagagactgttt 45812646  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
     ||  |||| | || ||||| ||| ||||||||||| ||||||||| ||||| |||||||||||||||||    
T  45812647 tcaggacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttacccctc 45812716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 25290212 - 25290138
Alignment:
Q  98 tttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctcgt 172  Q
    ||||||| |||| | | |||||| ||| ||||||||||| ||||||||||| ||| |||||||||||||| ||||    
T  25290212 tttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacctgttgcgccaaggttacccttcgt 25290138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45264413 - 45264463
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    |||||||||||||||||||| |||||||||| ||||| || ||||||||||    
T  45264413 tgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccatttt 45264463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 9939608 - 9939443
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaa-ggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatt 99  Q
    ||||||||||||||||||||||||||||| | ||| || || ||||||||||| |||| ||  ||| |  ||||||  |||| ||| | ||| || | ||    
T  9939608 tgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaaacaagaggttgtt 9939509  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgaccacaac-tttaccagttacgccaaggtta 164  Q
    ||||  |||| | | |||||| ||| ||||||||||| ||||| |||||| ||| |||||||||||    
T  9939508 tccaggacttgaactcgtgacctttcagtcacatgacaacaacttttaccggttgcgccaaggtta 9939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 4430099 - 4430207
Alignment:
Q  62 tacgtagtcttacctagttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaagg 161  Q
    |||| |||||||||  |||||||||| |||   || ||| ||| |||||| |||||||| ||  ||||||||||| ||||||||||||| | |||||||     
T  4430099 tacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaactttaccagctgcgccaaga 4430198  T
Q  162 ttacccctc 170  Q
    ||| |||||    
T  4430199 ttaaccctc 4430207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 6358264 - 6358216
Alignment:
Q  3 cactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    |||||||| ||| |||||||||||||||||||||| || ||||||||||    
T  6358264 cactaaagatcctgcatacgcagggtctgggaaggggtcccaccatttt 6358216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22325037 - 22324982
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 57  Q
    ||||||||||||||||||||||||||||| |||| || | |||||||||||| ||||    
T  22325037 tgcactaaagctcccgcatacgcagggtc-gggacggggctccaccatttttggtgt 22324982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 33223051 - 33222971
Alignment:
Q  80 tttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaag 160  Q
    |||||||| ||| |||| ||||||  ||||||  ||||||| ||| ||||||||||| ||||||||||| ||| |||||||    
T  33223051 tttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaactttaccggttgcgccaag 33222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 41440618 - 41440666
Alignment:
Q  3 cactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    ||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  41440618 cactaaagctcccgcatacacagagtctaggaaggggttccaccatttt 41440666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1517325 - 1517371
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 47  Q
    |||||||||||||| |||||||||||||||| ||||| || ||||||    
T  1517325 tgcactaaagctcctgcatacgcagggtctgagaaggggtcccacca 1517371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 11596650 - 11596524
Alignment:
Q  7 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaa 106  Q
    |||||||||||||||||||||||  |||||| || |||||||||   |||| ||||||| || ||||||  |||||| ||| ||| || | |||| |  |    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatttg--gtgtattatacgcagccttaccctgttttt-acacaagaggttgtttctagga 11596554  T
Q  107 cttaatcccgtgacatttaagtcacatgac 136  Q
    ||| | |||||||||||| |||||||||||    
T  11596553 cttgaacccgtgacatttcagtcacatgac 11596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 18724634 - 18724704
Alignment:
Q  78 gttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttacc 148  Q
    |||||||||| ||| |||| ||||||  |||| | |||||||| ||| ||||||||||| |||||||||||    
T  18724634 gttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 18724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43768283 - 43768237
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 47  Q
    |||| ||||||||||| |||||||||||||||||||| || ||||||    
T  43768283 tgcattaaagctcccgtatacgcagggtctgggaaggggtcccacca 43768237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4587577 - 4587626
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||| ||||||||||||| |||||||| ||||||| || |||||||||    
T  4587577 tgcactgaagctcccgcataggcagggtccgggaaggggtcccaccattt 4587626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23796609 - 23796560
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||||||||||| ||||| |||||||||||||||| ||  ||||||||    
T  23796609 tgcactaaagctccagcatatgcagggtctgggaaggggtctcaccattt 23796560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30555259 - 30555210
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||| ||||||||||||||| | ||||| || |||||||||    
T  30555259 tgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattt 30555210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35019373 - 35019340
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctggga 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  35019373 tgcactaaagctctcgcatacgcagggtctggga 35019340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35253201 - 35253250
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  35253201 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 35253250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 45402114 - 45402077
Alignment:
Q  128 tcacatgaccacaactttaccagttacgccaaggttac 165  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  45402114 tcacatgacaacaactttaccagttgcgccaaggttac 45402077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 2435800 - 2435958
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||| || |||||  || |||| || |||||| |||| |||| || |||| || ||||||   ||||| ||| | | |||| |||    
T  2435800 tgcactaaagctcccgcatgcggagggtacggaaaggggtcccacca-ttttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgttt 2435898  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaagg 161  Q
    |||  |||| | |||||||| ||| |||||| |||| ||||||||||| ||| ||||||||    
T  2435899 ccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 2435958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 30682950 - 30682902
Alignment:
Q  7 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgt 55  Q
    |||||||||||||||||| |||| ||||||| || ||||||||| ||||    
T  30682950 aaagctcccgcatacgcacggtccgggaaggggtcccaccatttgttgt 30682902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 14530441 - 14530272
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||| || |||| || ||||||| ||||||  |||||||| | ||| |||| |||    
T  14530441 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttatacaagaggctgttt 14530342  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  14530341 ccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 14530272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 10543821 - 10543653
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||||||| |||| || |||| || ||||||  |||||||||| ||| |||  |||    
T  10543821 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggccgttt 10543722  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccct 169  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||||||| ||||| ||||||||||||||||    
T  10543721 ccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttacccct 10543653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 11514556 - 11514392
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||   |||| || |||| || ||||| | |||||||||| ||| |||| |||    
T  11514556 tgcactaaagctcccgcatacgcagggtctgggaagg-gtcccaccatttg--gtgtattgtacgcagccttactttgttttttacacaagaggctgttt 11514460  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccc 168  Q
    |||  | || | |||||||| ||  ||||||||||| ||||||||||||||| |||||||||||||||    
T  11514459 ccaggagttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccc 11514392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 8455330 - 8455497
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||| |||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||  || ||||||| ||| |||| |||    
T  8455330 tgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtgttttacacaagaggctgttt 8455427  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  8455428 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 8455497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 24200637 - 24200805
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||| | ||||| ||||||| |||||||  | ||||||||||| |||| || |||| || ||||||  |||||||||| ||| |||| |||    
T  24200637 tgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 24200736  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccct 169  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |  |||||||||||||    
T  24200737 ccaggacttgaacccgtgacttttcagtcacatgacaacaactttaccagttgcatcaaggttacccct 24200805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 9671300 - 9671133
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||  ||| |||| || |||| || ||||||   | ||||||| ||| |||| |||    
T  9671300 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttacc--ctgttttacacaagaggctgttt 9671205  T
Q  101 ccaaaacttaatcccgtgacattt-aagtcacatgaccacaactttaccagttacgccaaggttacccctcg 171  Q
    |||  | || | ||||||||||||  ||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  9671204 ccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggttgcgccaaggttacccctcg 9671133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 7214657 - 7214488
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||| ||| ||||||||||| ||| | |||||  |  ||||||||||||||| || |||| || ||||||  || ||||||| ||| | || |||    
T  7214657 tgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaagagactgttt 7214558  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||| |||| | ||| |||| ||| ||||||||||| |||||||||||||||  ||||| ||||||||||    
T  7214557 ccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttgtgccaaagttacccctc 7214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 25079731 - 25079899
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagtttttt-acaaaagtggctatt 99  Q
    |||||||||||||  |||||||||||||| ||||||| || ||||||||    |||| || |||| |  ||||||| ||||||| ||| ||| || | ||    
T  25079731 tgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcg--gtgtattgtacgcatccttaccttgtttttttacacaagaggttgtt 25079828  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    || || |||| | |||||||| ||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  25079829 tctaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 25079899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 12024009 - 12024099
Alignment:
Q  80 tttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||||| ||| |||| ||||||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  12024009 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 12024099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 31158456 - 31158598
Alignment:
Q  4 actaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttcca 103  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||| || | || || | | |||||||  |||||||||  ||| |||| |||  |    
T  31158456 actaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgttttga 31158555  T
Q  104 aaacttaatcccgtgacatttaagtcacatgaccacaacttta 146  Q
    | |||| | ||| |||| ||| ||||||||||| |||||||||    
T  31158556 agactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 14544187 - 14544018
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttt-tacaaaagtggctatt 99  Q
    |||||||||||||||||||||||||||||  |||||| || | |||||||||||  | ||  ||| |||||||||  |||||| |||| ||| |||| ||    
T  14544187 tgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtttttctacacaagaggctgtt 14544088  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccct 169  Q
    ||||  || |   || || || ||| ||||||||||| |||||||||||| || ||||||||||||||||    
T  14544087 tccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcgccaaggttacccct 14544018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 19977804 - 19977893
Alignment:
Q  79 ttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccc 168  Q
    ||||||||||||| |||| |||||| ||||| | |||||||| |||  |||||||||| ||||||| ||||||| |||||||||||||||    
T  19977804 ttttttacaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaacttcaccagttccgccaaggttacccc 19977893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 21779275 - 21779440
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| |  ||||||  |||||  ||| ||| |||| | |    
T  21779275 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcaaccttaccctgtttt--acacaagaggctgtct 21779370  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||||| ||||||| |||||||||||||||||    
T  21779371 ccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgccaaggttacccctc 21779440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 23397885 - 23397720
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| | |||||| | ||||| || |||||||||   |||| || ||||||| ||||||   | ||||||| ||| |||| |||    
T  23397885 tgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttg--gtgtattgtacgtagccttaccc--tattttacacaagaggctgttt 23397790  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | ||| |||| ||| ||||||||||| ||||||||||||||| | |||||||||||||||    
T  23397789 ccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctc 23397720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 19185760 - 19185812
Alignment:
Q  4 actaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtg 56  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  19185760 actaaagctcccgcatacgcagggtccaggaaggggttccaccattttttgtg 19185812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23488604 - 23488548
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 57  Q
    ||||||||||||| ||||||||||||||| ||||||| || ||||||||||||||||    
T  23488604 tgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgt 23488548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 5841151 - 5840981
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| || ||||| ||||||| || |||||||| ||  ||| || |||| |  ||||||   ||||||||| ||  |||| |||    
T  5841151 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttacacaaaaggctgttt 5841052  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctcg 171  Q
    | |  |||| | |||||||| ||  ||||||||||| ||||||||| || || | ||||||||||||||||    
T  5841051 ctaggacttgaacccgtgaccttccagtcacatgacaacaactttatcatttgcaccaaggttacccctcg 5840981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10546284 - 10546235
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  10546284 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 10546235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14444849 - 14444800
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  14444849 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 14444800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 17896381 - 17896215
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc-tagttttttacaaaagtggctatt 99  Q
    ||||||||||||||| ||||||||||||| | ||||| || |||||||||   || | || |||| || |||||| || ||||||||| ||| || | ||    
T  17896381 tgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttg--gtatattgtacgcagccttaccctatttttttacacaagaggttgtt 17896284  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccc 168  Q
    || |  |||| |  ||||||| |||  |||||||||| ||||||||||||||| || ||||||||||||    
T  17896283 tctaggacttgaatccgtgacctttcggtcacatgacaacaactttaccagttgcgtcaaggttacccc 17896215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44643644 - 44643595
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||||| |||||||||||||||||||||||||||| || |||||||||    
T  44643644 tgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccattt 44643595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 17668123 - 17667974
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||  |||||||||||  | ||||| |||||||||  ||| |||| || |||| || ||||||  | |||||||| ||| || | |||    
T  17668123 tgcactaaagctcccatatacgcagggttcgagaaggggttccacca--tttggtgtattgtacgcagccttaccctgatttttacacaagaggttcttt 17668026  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagtt 152  Q
    |||  |||| | |||||||| ||  ||||||||||| |||||||||||||||    
T  17668025 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagtt 17667974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 39189558 - 39189602
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  39189558 agtcacatgacaacaactttaccagttgcgccaaggttacccctc 39189602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 99281 - 99328
Alignment:
Q  3 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccattt 99328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 17705506 - 17705447
Alignment:
Q  113 cccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctcgt 172  Q
    |||||||| ||  ||||||||||| ||||||||||||||| | |||||||||||||||||    
T  17705506 cccgtgaccttctagtcacatgacaacaactttaccagttgcaccaaggttacccctcgt 17705447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 25249752 - 25249915
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||| ||||||||||||||  |||||||  | |||||||||   |||| || |||| || ||||||  |||| | ||| ||| | || |||    
T  25249752 tgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttg--gtgtattgtacgcagccttaccctgtttgt-acacaagagactgttt 25249848  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    |||  |||| | |||||||| ||  ||||||||||| |||||||||||| || ||||||||||||||    
T  25249849 ccatgacttgaacccgtgaccttacagtcacatgacaacaactttaccaattgcgccaaggttaccc 25249915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 32781308 - 32781467
Alignment:
Q  7 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaa 106  Q
    ||||||||||||||| ||||||||||||||| || ||||||  ||| |||| || |||| |||||||||  |||||||||| ||| || | ||||| | |    
T  32781308 aaagctcccgcatacacagggtctgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgaga 32781405  T
Q  107 cttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccct 169  Q
    ||| | | |||||| ||| ||  ||||  | |||||||||||| || |||||||||| |||||    
T  32781406 cttgaactcgtgacctttcagcaacattgcaacaactttacca-ttgcgccaaggttccccct 32781467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 40762248 - 40762348
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||| |||||||||||||  |||| | || ||||||  ||| |||| || ||||||| |||||| ||||||||||| ||| |||| |||    
T  40762248 tgcactaaagctcccacatacgcagggtccaggaaagggtcccacca--tttggtgtattgtacgtagccttacccagttttttacacaagaggctgttt 40762345  T
Q  101 cca 103  Q
    |||    
T  40762346 cca 40762348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34766376 - 34766330
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 47  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||    
T  34766376 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24860002 - 24860051
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||||||||| | ||||| |||| |||||||    
T  24860002 tgcactaaagctcccgcatacgcagggtccgagaaggggttctaccattt 24860051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30826156 - 30826108
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||||||    
T  30826156 tgcactaaagctcccgcatatgtagggtctgggaagg-gttccaccattt 30826108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31523352 - 31523303
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||||||||||||||||| ||||||| |||||| | ||||||||||||    
T  31523352 tgcactaaagctcccgcatatgcagggtttgggaaagggttccaccattt 31523303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 22371055 - 22371011
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||||||| |||||||||||||||  ||||||||||||||||    
T  22371055 agtcacatgacaacaactttaccagttgggccaaggttacccctc 22371011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 27573628 - 27573581
Alignment:
Q  117 tgacatttaagtcacatgaccacaactttaccagttacgccaaggtta 164  Q
    |||| ||| ||||||||||| ||||||||||||||| |||||||||||    
T  27573628 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40579763 - 40579810
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccat 48  Q
    ||||||||||||||||||||| ||||||| ||||||| || |||||||    
T  40579763 tgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 124928 - 124962
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaa 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  124928 tgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 22371233 - 22371199
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaa 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  22371233 tgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24890532 - 24890486
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 47  Q
    |||||||||||||| |||||||||||||| ||||||| || ||||||    
T  24890532 tgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca 24890486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 27466267 - 27466316
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttacccctcgttta 175  Q
    ||||||||||| ||||||||||||||| |||||| ||||| |||| ||||    
T  27466267 agtcacatgacaacaactttaccagttgcgccaatgttacgcctctttta 27466316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 33795400 - 33795359
Alignment:
Q  7 aaagctcccgcatacgcagggtctgggaaggagttccaccat 48  Q
    ||||||||||||||| ||||||||||||||| || |||||||    
T  33795400 aaagctcccgcatacacagggtctgggaaggggtcccaccat 33795359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36871612 - 36871564
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||||||||||||||||||||| |||| ||||||| || |||||||||    
T  36871612 tgcactaaagctcccgcatacgca-ggtccgggaaggggtcccaccattt 36871564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 45235833 - 45235903
Alignment:
Q  3 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc 75  Q
    |||||||||||| ||||||| ||||||||| |||| || ||||||  |||||||| ||| |||||| ||||||    
T  45235833 cactaaagctcctgcatacgtagggtctggtaaggggtcccacca--ttttgtgtattacacgtagccttacc 45235903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8576016 - 8575980
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaagg 37  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  8576016 tgcactaaagctcccacatacgcagggtccgggaagg 8575980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 17623685 - 17623536
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||| || |||||||||| |  ||||||| ||||||||||||   |||| || |||| || ||||||  | |||||||| ||| || | |||    
T  17623685 tgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttg--gtgtattgtacgcagccttaccctgatttttacacaagaggttgttt 17623588  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagtt 152  Q
    | |  |||| | |||||||| ||  |||| |||||| |||||||||||||||    
T  17623587 cgaggacttgaacccgtgaccttccagtcgcatgacaacaactttaccagtt 17623536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 39914320 - 39914348
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtc 29  Q
    |||||||||||||||||||||||||||||    
T  39914320 tgcactaaagctcccgcatacgcagggtc 39914348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 38879704 - 38879535
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||| | ||| |||| |||    
T  38879704 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgttt 38879605  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  38879604 ccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 38879535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 4619118 - 4619284
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||| |||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||| ||||||||    
T  4619118 tgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctattt 4619217  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    |||  |||| | |||||||| ||  ||||||||||| ||||||||||||||| ||||||||||||||    
T  4619218 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 4619284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 43334325 - 43334159
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagtttttt-acaaaagtggctatt 99  Q
    ||||||||||||||||||| ||||||||| ||||||| || ||||||||||| |||| || |||| || ||||||  ||||||| ||| | | |||| ||    
T  43334325 tgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttacacaggaggctgtt 43334227  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    ||||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  43334226 tccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 43334159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 24449011 - 24448844
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||| |||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||   ||||||||| ||  |||| |||    
T  24449011 tgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctattttttacacaaaaggctgttt 24448914  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  24448913 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 24448844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 27328875 - 27328709
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||| |||||||||||||||||||||||  ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||| | || |||    
T  27328875 tgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgttt 27328776  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    |||  |||| | || ||||| ||| ||||||||||| |||||||||||| || || |||||||||||    
T  27328775 ccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccaattgcgtcaaggttaccc 27328709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 41014439 - 41014273
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| || |||||  |||||| || |||||||||   |||| || |||| || ||||||  |||||| ||| ||| |||| |||    
T  41014439 tgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagaggctgttt 41014343  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  41014342 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 41014273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 12006342 - 12006500
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| |||||||||||||||| || |||||||| || |||| || || | || ||||||   ||||||||| ||| || | |||    
T  12006342 tgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttacataagaggttgttt 12006441  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaa 159  Q
    ||| |  | || |||||||| ||| ||||||||||| ||||||| | ||||| ||||||    
T  12006442 ccagacttgaaccccgtgacctttcagtcacatgacaacaacttgagcagttgcgccaa 12006500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 22187408 - 22187239
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||| ||||| | ||||| |||||||| ||  ||   ||||| |||| || |||| ||||||| |  |||||||||| ||| |||| |||    
T  22187408 tgcactaaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgttt 22187309  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||||| || ||||| ||| ||||| ||||| |||||||||| |||| |||||| ||||||||||    
T  22187308 ccaggacttaaaccggtgacctttcagtcaaatgacaacaactttactagttgcgccaaagttacccctc 22187239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 8169998 - 8170163
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||| || |||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  |||||||  ||| |||    
T  8169998 tgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttacacaaaag--gctgttt 8170093  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| |||  |||||||||| ||||||||||||||| ||||||||||| |||||    
T  8170094 ccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaaggttagccctc 8170163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 35710356 - 35710267
Alignment:
Q  81 ttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||| ||| |||| ||||||  |||| | |||||||| ||| ||| ||||||| ||||||||||||||| |||||||||||||||||    
T  35710356 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttacccctc 35710267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 37024646 - 37024735
Alignment:
Q  81 ttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||| ||| |||| ||||||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| | |||||||||||||||    
T  37024646 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctc 37024735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 1565442 - 1565385
Alignment:
Q  113 cccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||| ||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  1565442 cccgcgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1565385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16957435 - 16957386
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  16957435 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 16957386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25622581 - 25622533
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 49  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||||    
T  25622581 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39801637 - 39801591
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 47  Q
    |||||||||||||||||||||| |||||||||||||| || ||||||    
T  39801637 tgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 10306493 - 10306538
Alignment:
Q  6 taaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccatttt 10306538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 18684394 - 18684361
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctggga 34  Q
    ||||||||||||||||||||||||||||||||||    
T  18684394 tgcactaaagctcccgcatacgcagggtctggga 18684361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 43574723 - 43574678
Alignment:
Q  5 ctaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||||| ||||||| || |||||||||    
T  43574723 ctaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 43574678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 19438747 - 19438703
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||||    
T  19438747 agtcatatgacaacaactttaccagttgcgccaaggttacccctc 19438703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 22600452 - 22600408
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||    
T  22600452 agtcacatgataacaactttaccagttacgtcaaggttacccctc 22600408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 2838776 - 2838733
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttacccct 169  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||    
T  2838776 agtcacatgacaacaactttaccggttgcgccaaggttacccct 2838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13801781 - 13801876
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggct 96  Q
    ||||||||||||| |||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||| ||||    
T  13801781 tgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggct 13801876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 23974825 - 23974735
Alignment:
Q  79 ttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||||| ||| || | ||||||  |||| | |||||||| ||  ||||||||||| ||||||||||| ||| |||||||||||||||||    
T  23974825 ttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgccaaggttacccctc 23974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 31694122 - 31694161
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagt 40  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  31694122 tgcactaaatctcccgcatacgcaaggtctgggaaggagt 31694161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5873336 - 5873382
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 47  Q
    ||||||||||||||||||||||||| ||| ||| |||||| ||||||    
T  5873336 tgcactaaagctcccgcatacgcagtgtccggggaggagtcccacca 5873382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21784346 - 21784396
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    ||||||||| ||||||||||||||||||| || |||| || ||||||||||    
T  21784346 tgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccatttt 21784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7097774 - 7097823
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||||||||  ||||||| ||  ||||||||    
T  7097774 tgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccattt 7097823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19142957 - 19143006
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||| |||||||||||||| |||| ||||||| || |||||||||    
T  19142957 tgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccattt 19143006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 22861791 - 22861844
Alignment:
Q  114 ccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    ||||||| ||| ||||||||||| ||||||||| |||||  |||||||||||||    
T  22861791 ccgtgacctttcagtcacatgacaacaactttatcagttgtgccaaggttaccc 22861844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 28516449 - 28516593
Alignment:
Q  3 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttcc 102  Q
    |||||||||||| |||| ||||||||||||||| | || |||||| ||||  ||| || |||| || | || |  |||||||||| ||| || | |||||    
T  28516449 cactaaagctcctgcatgcgcagggtctgggaatgggtcccacca-ttttgatgtattgtacgcagccctagcctgttttttacacaagaggatgtttcc 28516547  T
Q  103 aaaacttaatcccgtgacatttaagtcacatgaccacaactttacc 148  Q
    || |||| | |||||||| ||| || ||| |||| |||||||||||    
T  28516548 aagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 31299632 - 31299591
Alignment:
Q  124 taagtcacatgaccacaactttaccagttacgccaaggttac 165  Q
    ||||||||||||| ||||||||||||||| | ||||||||||    
T  31299632 taagtcacatgacaacaactttaccagttgcaccaaggttac 31299591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32703543 - 32703494
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  32703543 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 32703494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42924844 - 42924932
Alignment:
Q  1 tgcactaaagctcccgcatacgcagg--gtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttaca 87  Q
    |||||||||||| |||||||||||||  |||||||||||  ||||| ||||||| |||| || |||| |  ||||||  ||||||||||    
T  42924844 tgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccctgttttttaca 42924932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 13774986 - 13774958
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtc 29  Q
    |||||||||||||||||||||||||||||    
T  13774986 tgcactaaagctcccgcatacgcagggtc 13774958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32354248 - 32354212
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaagg 37  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  32354248 tgcactaaagctcccgcatacacagggtccgggaagg 32354212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 39301244 - 39301087
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||| ||||| |||||| |||||| ||||||| || ||||| ||||| |||  ||||||| |  ||||||  ||||| |||| ||| || | ||     
T  39301244 tgcactaaa-ctcccacatacggagggtccgggaaggggtcccacc-tttttggtgcattatacgcatccttaccctgttttatacacaagaggttgttc 39301147  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaagg 161  Q
    |||| |||| | |||||||| ||| ||| ||||||| ||||||||||| ||| ||||||||    
T  39301146 ccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc-gttgcgccaagg 39301087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 4e-32; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 36720917 - 36720750
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||| |||||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||||||| ||| |||| |||    
T  36720917 tgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 36720820  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  36720819 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttacccctc 36720750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 39461008 - 39461177
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||  ||||||| || |||| || |||| || |||||   |||||||||| ||| |||| |||    
T  39461008 tgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttacacaagaggctgttt 39461107  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| |||| |||||| ||||||||||||||| |||||||||||||||||    
T  39461108 ccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgcgccaaggttacccctc 39461177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 28817640 - 28817807
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||||    |||| || |||| || ||||||  |||||||||| ||| |||| |||    
T  28817640 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgg--gtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 28817737  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||  ||||||||||| ||||||||||||||| | |||||||||||||||    
T  28817738 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 28817807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 44530270 - 44530103
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||||||||||||  |||||| || |||||||||   |||| || |||| || ||||||  |||||||||| ||| || | |||    
T  44530270 tgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttttacacaagaggttgttt 44530173  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||| |||| | |||||||| ||  |||||||||||  |||||||||||||| |||||||||||||||||    
T  44530172 ccaagacttgaacccgtgaccttctagtcacatgacagcaactttaccagttgcgccaaggttacccctc 44530103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 7136541 - 7136710
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  | |||||||| ||| || | |||    
T  7136541 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagaggttgttt 7136640  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | ||| |||| ||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  7136641 ccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 7136710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 12670264 - 12670429
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| ||| |||| |||    
T  12670264 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgttt 12670359  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  12670360 ccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 12670429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 30454111 - 30454276
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| |  |||| || ||||||| |||||  ||| ||| |||| |||    
T  30454111 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtatcgtacgcagccttaccttgtttt--acacaagaggctgttt 30454206  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  30454207 ccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 30454276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 17823697 - 17823530
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||| ||||| |||||||  ||||||| ||||||||||||   |||| || |||| ||||||| |  | |||||||| ||| |||| |||    
T  17823697 tgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttg--gtgtattttacgcagtcttatcctggtttttacacaagaggctgttt 17823600  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| |||  |||||||||| ||||||||||||||| ||||||| |||||||||    
T  17823599 ccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaagattacccctc 17823530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 26954256 - 26954086
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagtttttt-acaaaagtggctatt 99  Q
    |||||||||||||||||||| ||  |||||||||||| || |||||||| || |||| || |||| || ||||||  ||||||| ||| ||| |||| ||    
T  26954256 tgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtt 26954157  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||  |||| | |||||||| ||  | ||||||||| |||||||||||| ||||||||| ||||||||||    
T  26954156 tccaggacttgaacccgtgaccttctaatcacatgacaacaactttaccaattacgccaaagttacccctc 26954086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 29521699 - 29521866
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||||||||||||||||| ||  | ||||||  ||| |||| || |||| || ||||||  |||||||| | ||| |||| |||    
T  29521699 tgcactaaagctcccgcatacgcagggtctgggatgggttcccacca--tttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgttt 29521796  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||  ||||||| ||| ||||||||| ||||| |||||||||||||||||    
T  29521797 ccaggacttgaacccgtgaccttccagtcacacgacaacaactttatcagttgcgccaaggttacccctc 29521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 35261800 - 35261633
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||||||||||||  |||||| || |||||||||   |||| || |||| |  ||||||  |||||||||| ||| | || |||    
T  35261800 tgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttg--gtgtattgtacgcaaccttaccctgttttttacacaagagactgttt 35261703  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||   ||| | |||||||| ||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  35261702 ccagggcttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 35261633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 6760945 - 6760777
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| || ||||| | ||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||| |||| |||    
T  6760945 tgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttacacaagaggctgttt 6760846  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||  ||||| ||||| ||||||||||||||| |||||| ||||||||||    
T  6760845 ccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcgccaa-gttacccctc 6760777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 20284083 - 20284250
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc--tagttttttacaaaagtggctat 98  Q
    ||||||||| ||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |  ||||||| | ||| |||| |    
T  20284083 tgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagaggctgt 20284182  T
Q  99 ttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacc 166  Q
    |||||  |||| | |||||||| ||| ||||||||||| ||||||||||| ||| || ||||||||||    
T  20284183 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 20284250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 2626643 - 2626473
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc---tagttttttacaaaagtggcta 97  Q
    |||||| ||||||||||||| |||||||||||||||| || ||| ||  ||| |||| || |||| |||||||||   |  ||||||||| ||| ||||     
T  2626643 tgcactgaagctcccgcatatgcagggtctgggaaggggtcccatca--tttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctg 2626546  T
Q  98 tttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||  |||| | |||||||| |||  |||||||||| |||||||||||| || |||||||||||||||||    
T  2626545 tttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcgccaaggttacccctc 2626473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 21070711 - 21070879
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc---tagttttttacaaaagtggcta 97  Q
    ||||||||| ||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||   |  ||||||| | ||| ||||     
T  21070711 tgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaagaggctg 21070810  T
Q  98 tttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacc 166  Q
    ||||||  |||| | |||||||| ||| ||||||||||| ||||||||||| ||| || ||||||||||    
T  21070811 tttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 21070879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 45071385 - 45071219
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||| ||||||||||||||||| |||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||| ||| ||| |||| |||    
T  45071385 tgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagaggctgttt 45071289  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||| ||||| | |||||||| ||  | ||||||||| ||||||||||||||  |||||||||||||||||    
T  45071288 ccagaacttgaacccgtgaccttacaatcacatgacaacaactttaccagtatcgccaaggttacccctc 45071219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 170
Target Start/End: Complemental strand, 13160821 - 13160656
Alignment:
Q  2 gcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttc 101  Q
    ||||| |||||||||||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||| ||| ||| |||| ||||    
T  13160821 gcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttc 13160725  T
Q  102 caaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
     |  |||| | |||||||| ||  ||||||||||| ||||||||||||||| |||| ||||||||||||    
T  13160724 taggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccgaggttacccctc 13160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 11748392 - 11748254
Alignment:
Q  31 gggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtca 130  Q
    ||||||| || | |||||||||||| | || ||||  ||||||||  | |||||||||||| |||| ||||||| |||| | |||||||||||| |||||    
T  11748392 gggaaggggtcctaccattttttgtatattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtca 11748293  T
Q  131 catgaccacaactttaccagttacgccaaggttacccct 169  Q
    |||||| |||| || ||||||| | |||| |||||||||    
T  11748292 catgacaacaatttcaccagttgcaccaaagttacccct 11748254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 44781518 - 44781677
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||||||||||||||||| || || ||| ||||||| |||| || |||  || ||||||  || ||||||| ||| || | |||    
T  44781518 tgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgttt 44781617  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaagg 161  Q
    |||  |||| | |||||||  ||| |||||| |||| ||||||||||| ||| ||||||||    
T  44781618 ccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc-gttgcgccaagg 44781677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 8897778 - 8897940
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||| ||||||||||||||| |||||||| ||||||| || ||||||  ||| |||| || ||||||| ||||||   ||||||||| ||| || | |||    
T  8897778 tgcagtaaagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgtagccttaccctattttttacacaagcggttgttt 8897875  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttac 165  Q
    |||  |||| | |||||||| ||   |||||||||| |||||||||||||||  |||| ||||||    
T  8897876 ccaggacttcaacccgtgaccttgctgtcacatgacaacaactttaccagttgtgccagggttac 8897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 20869588 - 20869677
Alignment:
Q  81 ttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||| ||| |||| ||||||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| ||||||||||| |||||    
T  20869588 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttatccctc 20869677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 24245565 - 24245405
Alignment:
Q  6 taaagctcccgcatacgcagggtctgggaaggagttccaccattttttg-tgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaa 104  Q
    ||||||||||||||||||||||||  |||||| || |||| |||||||| ||  || ||||||||||||||  |||    ||| ||| | |  ||||||     
T  24245565 taaagctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtcttaccctgtt----acataagagacg-tttccag 24245471  T
Q  105 aacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
     |||| | |||||||| ||| ||||||||||| ||||||||||||||| | |||||||||||||||    
T  24245470 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgccccaaggttacccctc 24245405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 12626011 - 12625861
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagtttttt-acaaaagtggctatt 99  Q
    ||||||||||||||||||||||||||||| |||| || || |||||||||   |||| || || | |||||||||  ||||||| ||| ||| || | ||    
T  12626011 tgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttg--gtgtattgtatgcagtcttaccctgtttttttacacaagaggttgtt 12625914  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagtt 152  Q
    ||||  |||| | |||||||| |  |||||||| ||| |||||||||||||||    
T  12625913 tccaggacttgagcccgtgacctacaagtcacacgacaacaactttaccagtt 12625861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16013577 - 16013521
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 57  Q
    |||||||||||||||||||| |||||||||||||||| ||  |||||||||| ||||    
T  16013577 tgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgt 16013521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 16225142 - 16225047
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggct 96  Q
    |||||||||||||||||||| || ||||| |||||||  | |||||||| || |||| || |||| |||||||||  |||||||||| ||| ||||    
T  16225142 tgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttttacataagaggct 16225047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 18164850 - 18164940
Alignment:
Q  80 tttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||||| ||| |||| ||||||  |||| | |||||||| ||| ||||||||||| ||||||| ||| ||| ||||||| |||||||||    
T  18164850 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgccaagattacccctc 18164940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 25250645 - 25250480
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||| |||||||||| || ||||  ||||||| || |||||||| || |||| || |||| || | ||||   ||||||||| ||  |||| |||    
T  25250645 tgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttacacaataggctgttt 25250546  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacc 166  Q
    |||  |||| | |  ||||| ||  ||||||||||| |||||||||||||||  ||||||||||||    
T  25250545 ccaggacttgaacatgtgaccttccagtcacatgacaacaactttaccagttgtgccaaggttacc 25250480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 28407460 - 28407379
Alignment:
Q  80 tttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaagg 161  Q
    |||||||| ||| |||| ||||||  |||| | |||||||| ||  ||||||||||| ||||||||||||||| ||||||||    
T  28407460 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaagg 28407379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29877215 - 29877166
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||||| |||||||||||||||||||| ||||||| || |||||||||    
T  29877215 tgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccattt 29877166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 8483956 - 8484080
Alignment:
Q  5 ctaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaa 104  Q
    |||||||||||||||||||||||||||||| || || ||||||   || |||| || |||| || ||| ||  |||||||||| ||| || | ||||||     
T  8483956 ctaaagctcccgcatacgcagggtctgggatggggtcccacca--attggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccag 8484053  T
Q  105 aacttaatcccgtgacatttaagtcac 131  Q
     |||| | ||| |||||||||||||||    
T  8484054 gacttgaacccatgacatttaagtcac 8484080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 23286431 - 23286474
Alignment:
Q  127 gtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||||||| ||||||||||||||| || ||||||||||||||    
T  23286431 gtcacatgacaacaactttaccagttgcgacaaggttacccctc 23286474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 27468106 - 27468141
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaag 36  Q
    ||||||||||||||||||||||||||||| ||||||    
T  27468106 tgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 18164774 - 18164808
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaa 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  18164774 tgcactaaagctcccgcatacgcagggtccgggaa 18164808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 20870046 - 20869960
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttaca 87  Q
    |||||||||||||||||||| || |||||  |||||| || |||||||| || |||| || |||| || ||||||  ||||||||||    
T  20870046 tgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 20869960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27508031 - 27507985
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 47  Q
    ||||||||||||||||||||||||||||  ||||||| || ||||||    
T  27508031 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 40605044 - 40605086
Alignment:
Q  128 tcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||    
T  40605044 tcacatgacaacaactttaccagttgcgccaaagttacccctc 40605086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5689752 - 5689703
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||| |||||||| |||  ||||||| ||||||||||||    
T  5689752 tgcactaaagctcccacatacgcatggttcgggaaggggttccaccattt 5689703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26102638 - 26102589
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  26102638 tgcactagagctcccgcataagcagggtccgggaaggggtcccaccattt 26102589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28407524 - 28407475
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||| ||||||||||||||||| |||||| ||||||| || |||||||||    
T  28407524 tgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccattt 28407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31457293 - 31457244
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||| |||||||||||||||||||| |||||||| || | |||||||    
T  31457293 tgcactagagctcccgcatacgcagggtttgggaaggggtcctaccattt 31457244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 16408615 - 16408777
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| || ||||| ||||||| ||||||||||| || |||| || |||| |||||||||  |||||||||| ||| |||| |||    
T  16408615 tgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 16408714  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggtt 163  Q
    |||  |||| | |||||||| ||  ||||||||||| ||||||||||||||| ||||||||||    
T  16408715 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtt 16408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 16911682 - 16911519
Alignment:
Q  4 actaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttcca 103  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  | ||| |||| ||| |||| |||| |    
T  16911682 actaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttcta 16911583  T
Q  104 aaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
      |||| | |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  16911582 ggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttaccc 16911519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 54730373 - 54730206
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtctta-cctagttttttacaaaagtggctatt 99  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| |||| || |||| ||||||| || |||| |||| ||||||||| ||| |||| ||    
T  54730373 tgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggctgtt 54730274  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    || |  |||| | |||||||| |||  |||||||||| |||||||||||  || |||||| |||||||    
T  54730273 tctaggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcgccaaagttaccc 54730206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 5648379 - 5648213
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||| |||||||||||||||||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||| ||| ||| |||| |||    
T  5648379 tgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagaggctgttt 5648283  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  5648282 ccaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 5648213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 6430644 - 6430806
Alignment:
Q  5 ctaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaa 104  Q
    ||||||||||||||||||||||||| ||||||  || ||||||  ||| |||| || |||| || ||||||  | |||||||| ||| |||| ||||||     
T  6430644 ctaaagctcccgcatacgcagggtccgggaagtggtcccacca--tttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccat 6430740  T
Q  105 aacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
     |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  6430741 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 6430806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 21647087 - 21646918
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| || ||||||||||||| || |||||||| || || | || |||| || ||||||   ||||||||| ||| |||| |||    
T  21647087 tgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacacaagaggctgttt 21646988  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | || ||||| ||  ||||||||||| ||||||||||||||| ||||||||||| |||||    
T  21646987 ccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccctc 21646918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 23501910 - 23501747
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| |||||||| ||||||| || |||||||| || |||| || |||| |  ||||||  |||||||||| ||| |||| |      
T  23501910 tgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtg- 23501812  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
         |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  23501811 -----acttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 23501747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 44363144 - 44363294
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||||||| ||| ||| |||| || | ||||  |||||||||| | | |||| |||    
T  44363144 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttacacacgaggctgttt 44363243  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagt 151  Q
     ||  |||| | | |||||| ||| ||||||||||| ||||||||||||||    
T  44363244 tcaggacttgaactcgtgacctttcagtcacatgacaacaactttaccagt 44363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 35567291 - 35567146
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||| |||||||||  ||||||| || |||||||||   ||||||| |||  || ||||||  |||||||||| |||||||| |||    
T  35567291 tgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttg--gtgtgttgtacacagccttaccctgttttttacacaagtggctgttt 35567194  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttacc 148  Q
    |||| |||| | ||| |||| ||| ||| ||||||| |||||||||||    
T  35567193 ccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 11054162 - 11054327
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| ||||| ||||||   |||| || |||| |||||||||  |||||  ||| ||| | || |||    
T  11054162 tgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttg--gtgtattgtacgcagtcttaccctgtttt--acacaagagactgttt 11054257  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
     ||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||| ||||||||||    
T  11054258 tcaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttacccctc 11054327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 20225103 - 20224938
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| ||| || | |||    
T  20225103 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggttgttt 20225008  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | ||| |||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  20225007 ccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 20224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 48598839 - 48599004
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||| ||||| ||| |||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| ||| |||| |||    
T  48598839 tgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgttt 48598934  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  48598935 ccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 48599004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 30639500 - 30639334
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| |||||||| ||||||| ||  ||||||||   |||| || |||| || ||||||  |||||| ||| ||| | || |||    
T  30639500 tgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttg--gtgtattgtacgcagccttaccctgttttt-acacaagagtctgttt 30639404  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | || ||||| ||| ||||||| ||| ||||||||||||||| |||||||||||||||||    
T  30639403 ccaggacttgaaccagtgacctttcagtcacaagacaacaactttaccagttgcgccaaggttacccctc 30639334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 40915949 - 40915802
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||| |||||||||||||||||||||| |||||||  | ||||||  ||| |||| || |||| || ||||||| | |||||||| ||| |||| |||    
T  40915949 tgcactgaagctcccgcatacgcagggtccgggaagggctcccacca--tttggtgtattgtacgcagccttaccttg-tttttacacaagaggctgttt 40915853  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagt 151  Q
    |||  |||| | |||||||| ||  ||||||||||| ||||||||||||||    
T  40915852 ccaggacttgaacccgtgaccttatagtcacatgacaacaactttaccagt 40915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 20639672 - 20639773
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||| |||| |||| || |||| || ||||||  |||||||||| ||| |||| |||    
T  20639672 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-ttttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 20639770  T
Q  101 cca 103  Q
    |||    
T  20639771 cca 20639773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 5306755 - 5306844
Alignment:
Q  81 ttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||| ||| |||| ||||||  |||| | |||||||| ||| |||||||||||  |||||||||||||| |||||||||||||||||    
T  5306755 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaactttaccagttgcgccaaggttacccctc 5306844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 20405210 - 20405047
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagtttttt-acaaaagtggctatt 99  Q
    |||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||| | |||||||  ||||||| ||| ||| |||| ||    
T  20405210 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttttttacacaagaggctgtt 20405111  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||       ||  |||||||| ||  ||||||||||| ||||||||||||||| || ||||||||||||||    
T  20405110 tc-------taggcccgtgaccttccagtcacatgacaacaactttaccagttgcgtcaaggttacccctc 20405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 47528544 - 47528709
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| ||||||| ||||  ||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| ||| |||| |||    
T  47528544 tgcactagagctcccacatattcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgttt 47528639  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | || ||||| ||| ||||||||||| ||||||||||||||| | |||||||||||||||    
T  47528640 ccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctc 47528709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 5313118 - 5313172
Alignment:
Q  113 cccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    |||||||| ||| | ||||||||| ||||||||||||||||||||||||||||||    
T  5313118 cccgtgacctttcaatcacatgacaacaactttaccagttacgccaaggttaccc 5313172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 167
Target Start/End: Complemental strand, 14983953 - 14983791
Alignment:
Q  3 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttcc 102  Q
    ||||||||||||||||||||||||||| ||||||| || ||||||  ||| |||| || || | |  ||||||   ||||||||| ||| |||| ||||     
T  14983953 cactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttca 14983856  T
Q  103 aaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    || |||| |  ||||||| ||  | ||| ||||| |||||||||||||||  |||||||||||||    
T  14983855 aagacttgaatccgtgaccttccaatcatatgacaacaactttaccagttctgccaaggttaccc 14983791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 30352594 - 30352767
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttaccta---------gttttttacaaaag 91  Q
    ||||||||||||||||||||||||||||| | ||||| || ||||||||||| |||| || |||| ||  |||| ||          ||||||||| |||    
T  30352594 tgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttacttaccctgtttttttttttacacaag 30352693  T
Q  92 tggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttac 165  Q
     |||| ||||||  |||  | |||||||| |||  ||||| |||| ||||||||||||||| ||||||||||||    
T  30352694 aggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaaggttac 30352767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 10660402 - 10660358
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  10660402 agtcacatgacaacaactttaccagttgcgccaaggttacccctc 10660358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 10874547 - 10874503
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  10874547 agtcacatgacaacaactttaccagttgcgccaaggttacccctc 10874503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 14590847 - 14590795
Alignment:
Q  114 ccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacc 166  Q
    ||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||    
T  14590847 ccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 14590795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 25343306 - 25343162
Alignment:
Q  5 ctaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaa 104  Q
    ||||||||| | |||||||||| ||| |||||| || | ||| ||||| |||| || |||| || ||||||  |||||||||| ||| | |||||||||     
T  25343306 ctaaagctctcacatacgcaggatctaggaaggggtccaaccctttttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccag 25343207  T
Q  105 aacttaatcccgtgacatttaagtcacatgaccacaactttacca 149  Q
    ||||| | || ||||| | | |||||| |||| ||||||||||||    
T  25343206 aacttgaacctgtgacctatcagtcacgtgacaacaactttacca 25343162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33836501 - 33836549
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 49  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||||    
T  33836501 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 33836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38755922 - 38755970
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 49  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||||    
T  38755922 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 44718684 - 44718641
Alignment:
Q  5 ctaaagctcccgcatacgcagggtctgggaaggagttccaccat 48  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  44718684 ctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 47482864 - 47482915
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttt 52  Q
    ||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  47482864 tgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattttt 47482915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 487217 - 487306
Alignment:
Q  71 ttacctagttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaagg 161  Q
    |||||| ||||| |||| ||| || | ||||||| |||| | |||||||| ||| ||||||||||| ||||||||||| ||||||||||||    
T  487217 ttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc-gttacgccaagg 487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 17315422 - 17315476
Alignment:
Q  113 cccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    |||||||| ||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  17315422 cccgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 17315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20908650 - 20908700
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    ||||||||||||||||||||||||||||  ||||||| || ||||||||||    
T  20908650 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttt 20908700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 25463237 - 25463110
Alignment:
Q  7 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaa 106  Q
    |||||||||||||| |||||||| ||||||| || ||||||  ||| ||||||| |||| |  ||| || ||||||||||| ||| || | ||||||  |    
T  25463237 aaagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccagga 25463140  T
Q  107 cttaatcccgtgacatttaagtcacatgac 136  Q
    ||| | |||||||| ||| |||||||||||    
T  25463139 cttgaacccgtgacctttcagtcacatgac 25463110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30690190 - 30690236
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccacca 47  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||    
T  30690190 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 30690236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11394973 - 11394924
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||||||||| || |||| || |||||||||    
T  11394973 tgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11394924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11404700 - 11404651
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||||||||| || |||| || |||||||||    
T  11404700 tgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 55766574 - 55766647
Alignment:
Q  98 tttccaaaactt-aatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||||||||| || |||||||| ||   |||||||||| ||||||||||||||| || ||||||||||||||    
T  55766574 tttccaaaacttgaaccccgtgaccttccggtcacatgacaacaactttaccagttgcgtcaaggttacccctc 55766647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8820629 - 8820581
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 49  Q
    ||||||||| ||| ||||||||||||||||||||||| || ||||||||    
T  8820629 tgcactaaaactctcgcatacgcagggtctgggaaggggtcccaccatt 8820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 13256534 - 13256578
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||    
T  13256534 agtcacatgacaacaactttaccagttgcaccaaggttacccctc 13256578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 18969738 - 18969698
Alignment:
Q  127 gtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  18969738 gtcacatgacaacaactttaccagttgcgccaaggttaccc 18969698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35532113 - 35532077
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaagg 37  Q
    ||||||||||||||||||||||||||||| |||||||    
T  35532113 tgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 40553951 - 40553987
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaagg 37  Q
    ||||||||||||||||||||||||||||| |||||||    
T  40553951 tgcactaaagctcccgcatacgcagggtccgggaagg 40553987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50555670 - 50555718
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 49  Q
    ||||||||| |||| |||||||||||||| ||||||| |||||||||||    
T  50555670 tgcactaaaactcctgcatacgcagggtccgggaaggggttccaccatt 50555718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 17043413 - 17043549
Alignment:
Q  6 taaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaa 105  Q
    ||||||||| ||||| |||||||||||||||| || ||||||  ||| |||| || |||| || ||||||  || ||||||| ||| |||| ||||||      
T  17043413 taaagctccagcatatgcagggtctgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccagg 17043510  T
Q  106 acttaatcccgtgacatttaagtcacatgaccacaactt 144  Q
    |||| | || ||||| ||| |||||| |||| |||||||    
T  17043511 acttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32484354 - 32484307
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccat 48  Q
    |||||||||||||||||||| |||||||| ||||||| || |||||||    
T  32484354 tgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 16494338 - 16494284
Alignment:
Q  3 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 57  Q
    |||||||||| |||||||| ||||||||||||| | || ||||||||||| ||||    
T  16494338 cactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgt 16494284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20225197 - 20225123
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc 75  Q
    |||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||    
T  20225197 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacc 20225123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21489209 - 21489159
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    ||||| ||||||||||||||||||||||  ||||||| || ||||||||||    
T  21489209 tgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccatttt 21489159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 37494972 - 37494805
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||| ||||||||||||||  | |||| || |||||||||   || | || || | |  ||||||  |||||||||| ||| || | |||    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttg--gtatattgtatgcaaccttaccctgttttttacacaagaggttgttt 37494875  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | || ||||| ||| |||| |||| | ||||||||||||||| | |||||||||||||||    
T  37494874 ccaggacttgaacctgtgacctttcagtcgcatggcaacaactttaccagttgcaccaaggttacccctc 37494805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 49938611 - 49938657
Alignment:
Q  5 ctaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    |||||||||||||||| ||||||| |||||||| || ||||||||||    
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccatttt 49938657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 55830860 - 55830902
Alignment:
Q  128 tcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||||| ||||||||||||||| || ||||||||||||||    
T  55830860 tcacatgacaacaactttaccagttgcgtcaaggttacccctc 55830902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 19027969 - 19027823
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||| ||||||||| |||||| |||| || ||||||   || |||| || |||| || ||||||  |||||||||| |||  | | |||    
T  19027969 tgcactaaagctcccacatacgcagagtctggaaaggggtcccacca--attggtgtattgtacgcagccttaccctgttttttacacaagatgttgttt 19027872  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttacca 149  Q
    |||  |||| | |||||||| ||| |||||| |||| |||||| |||||    
T  19027871 ccaggacttgaacccgtgacctttcagtcacgtgacaacaactctacca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25629170 - 25629121
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||||||||||||||||| | |||||| ||||||| || |||||||||    
T  25629170 tgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccattt 25629121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28494272 - 28494223
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  28494272 tgcactagagctcccgcatatgcaggatctgggaaggggtcccaccattt 28494223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29207912 - 29207961
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  29207912 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 29207961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38786730 - 38786681
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  38786730 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 38786681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 51865052 - 51865101
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||| |||||||||||||||||||||||| ||||||| |  |||||||||    
T  51865052 tgcaataaagctcccgcatacgcagggtccgggaaggggccccaccattt 51865101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25388297 - 25388249
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 49  Q
    |||||||||||||  |||||||||||||| ||||||| || ||||||||    
T  25388297 tgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 36816400 - 36816448
Alignment:
Q  3 cactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    ||||||||||||||||||| |||||||  ||||||||| ||||| ||||    
T  36816400 cactaaagctcccgcatacacagggtccaggaaggagtcccaccttttt 36816448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 55830735 - 55830783
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 49  Q
    ||||||||||||| |||||||||| |||| |||| || |||||||||||    
T  55830735 tgcactaaagctctcgcatacgcaaggtccgggatggggttccaccatt 55830783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 42805647 - 42805478
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||  || ||||||  |||||||||| ||| |||| |||    
T  42805647 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgttt 42805548  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  42805547 ccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttacccctc 42805478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 42798790 - 42798623
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||| | || |||||||||   |||| || |||| || ||||||| |||||||||| ||| | || |||    
T  42798790 tgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttg--gtgtattgtacgcagccttaccttgttttttacacaagagactgttt 42798693  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||| |||| | |||||||| ||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  42798692 ccaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 42798623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 2541033 - 2541201
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||| | ||||||| || |||||||||   |||| |  |||| || ||||||  |||||||||| ||| |||| |||    
T  2541033 tgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttg--gtgtatagtacgcagccttaccctgttttttacacaagaggctgttt 2541130  T
Q  101 ccaaaacttaatcccgtgacattta-agtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| |||  ||||||||||| ||||||||||||||| |||||||||||||||||    
T  2541131 ccaggacttgaacccgtgacctttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 2541201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 22698981 - 22699151
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaag-gagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatt 99  Q
    ||||||| ||||||||||||| ||||||| |||||  | || ||||||||||| |||| || |||| |||||||||  |||||||||| ||| | |||||    
T  22698981 tgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttacacaagagactatt 22699080  T
Q  100 tccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||  |||| | ||| | || ||| ||||||||||| ||||||||||||||| || ||||||||||||||    
T  22699081 tccaggacttgaacccataacctttcagtcacatgacaacaactttaccagttgcgtcaaggttacccctc 22699151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 170
Target Start/End: Complemental strand, 43557589 - 43557426
Alignment:
Q  7 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaa 106  Q
    ||||||||||||||||||| ||| |||| || || |||||||| || |||| || |||| || |||||   |||||||||| ||| |||| ||||||  |    
T  43557589 aaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccagga 43557490  T
Q  107 cttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||| | ||| |||| ||| ||||||||||| ||||||||||||||| || ||||||||||||||    
T  43557489 cttgaacccatgacctttcagtcacatgacaacaactttaccagttgcggcaaggttacccctc 43557426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 47716582 - 47716412
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||| |||||||||||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||| |||| |||    
T  47716582 tgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 47716483  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctcg 171  Q
    |||  |||| | |||||||| ||  ||||||||| | |||||||| ||||||  |||||||||||||||||    
T  47716482 ccaggacttgaacccgtgaccttccagtcacatggcaacaacttttccagttgtgccaaggttacccctcg 47716412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 14732835 - 14732999
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||  ||||||  ||||||||||| |||||||||| |||| ||  ||| || ||||||  ||||||||||   | |||| |||    
T  14732835 tgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgttttttacatgggaggctgttt 14732933  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacc 166  Q
    |||  |||| | ||| |||| ||| ||||||||||| ||||||||||||||| |||||||||||||    
T  14732934 ccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcgccaaggttacc 14732999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 48735136 - 48735302
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  || ||||||| ||| || | |||    
T  48735136 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttacc--gtgttttacacaagaggttgttt 48735231  T
Q  101 ccaaa-acttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  48735232 ccaaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 48735302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 21172023 - 21172188
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| ||| |||| |||    
T  21172023 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgttt 21172118  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||| ||||||| ||||||||||||||| |||||||||||||||||    
T  21172119 ccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttacccctc 21172188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 5180169 - 5180337
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||| ||||||||| ||||||| ||| | ||| |||| || | | ||||||| ||||||| |||  |||||||||  |||||| ||| ||| |||| |||    
T  5180169 tgcattaaagctcctgcatacgtaggatttggaaaggggtccaatcatttttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgttt 5180268  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccct 169  Q
    ||| || || | ||| |||| ||| ||||||||||| ||||||||||||||| || |||||||||||||    
T  5180269 ccagaagttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttacccct 5180337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 11617602 - 11617762
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||| ||| ||||||||||||||  |||||| || |||||||||   |||| || |||| |||||||||  |||||||||| ||| || | |||    
T  11617602 tgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttg--gtgtattgtacgcagtcttaccctgttttttacacaagaggttgttt 11617699  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggtt 163  Q
    |||  |||| | || ||||| ||| ||||||||||| ||||||||||||||| |||| |||||    
T  11617700 ccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccgaggtt 11617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 32758380 - 32758215
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||  || ||||||  |||||  ||| ||| |||| |||    
T  32758380 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacacagccttaccctgtttt--acacaagaggctgttt 32758285  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | || ||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  32758284 ccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 32758215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 42476992 - 42476827
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||| | || |||||| || |||||||||   |||| || |||| || ||||||| |||||  ||| ||| | || |||    
T  42476992 tgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttg--gtgtattgtacgcagccttaccttgtttt--acacaagagactgttt 42476897  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||| ||||| |  ||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||    
T  42476896 ccagaacttgaatccgtgaccttttagtcacatgacaacaactttaccagttacgccaatgttacccctc 42476827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 46354302 - 46354148
Alignment:
Q  16 gcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaacttaatccc 115  Q
    ||||| || ||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||| || | ||||||  |||| | |||    
T  46354302 gcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaaccc 46354203  T
Q  116 gtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||| ||  | ||||||||| ||||||||||||||| |||||||||||||||||    
T  46354202 gtgaccttccaatcacatgacaacaactttaccagttgcgccaaggttacccctc 46354148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 23419688 - 23419845
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||| |||||| ||||| ||||| |||||| || |||||||||   |||| || |||| |||||||||  |||||||||| ||| |||| |||    
T  23419688 tgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttg--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 23419785  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaagg 161  Q
    ||| ||||| | || ||||| ||| |||||||||||  |||||||||| ||| ||||||||    
T  23419786 ccagaacttgaacctgtgaccttttagtcacatgacagcaactttacc-gttgcgccaagg 23419845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10693087 - 10693245
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||   | ||||||| ||| |||| |||    
T  10693087 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccc--tcttttacacaagaggctgttt 10693182  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggtt 163  Q
    |||  |||| | |||||||| ||| ||||||||||| |||||||||| |||| ||||||||||    
T  10693183 ccaggacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggtt 10693245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 40463997 - 40463837
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||| |||||||||||||||||||||| | ||||| || ||||||  ||| |||| ||||||| || |||||| || |||||||| ||| | || |||    
T  40463997 tgcactgaagctcccgcatacgcagggtccgagaaggggtcccacca--tttggtgtattatacgcagccttacccag-tttttacacaagagactgttt 40463901  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggtta 164  Q
    | |  |||| | |||||||| ||  ||||||||||| ||||||||||| ||| |||||||||||    
T  40463900 ctatgacttgaacccgtgaccttacagtcacatgacaacaactttaccggttgcgccaaggtta 40463837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 7193096 - 7193039
Alignment:
Q  113 cccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  7193096 cccgtgacctttcagtcacatgacaacaactttacaagttacgccaaggttacccctc 7193039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 18327078 - 18326989
Alignment:
Q  80 tttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccct 169  Q
    |||||||| ||| |||| |||||   |||| | |||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||    
T  18327078 tttttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaaggttacccct 18326989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 47077977 - 47078034
Alignment:
Q  113 cccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  47077977 cccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 47078034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 45018937 - 45018989
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttttt 53  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  45018937 tgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagttttt 45018989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 19426904 - 19427059
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||| |||||| |||||| |||||||| | ||||| || |||||||||   |||| || |||| |||||||||   ||||||||| ||| |||| |||    
T  19426904 tgcactgaagctctcgcatatgcagggtccgagaagg-gtcccaccatttg--gtgtattgtacgcagtcttaccctattttttacacaagaggctgttt 19427000  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaa 159  Q
    |||  |||| | |||||||| |||  |||||||||| ||||||||||||||| ||||||    
T  19427001 ccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 35334830 - 35334995
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||| |||||||||||||| ||||||| || ||||||  ||  |||| || |||  |||||||||  |||||||||  | | | || |||    
T  35334830 tgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacacagtcttaccctgttttttac--acgagactgttt 35334925  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | | |||||| ||  ||||||||||| ||||||||||||||| ||||||||||| |||||    
T  35334926 ccaggacttgaactcgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccctc 35334995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 27629755 - 27629596
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||| ||||| ||||||| |||||| | ||||||| || |||||||||   |||| || |||| |  ||||||  |||||||||| ||| |||| |||    
T  27629755 tgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttg--gtgtattttacgcaaccttaccctgttttttacacaagaggctgttt 27629658  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggt 162  Q
    |||  |||| | |||||||| |||  |||| ||||| ||||||||||||||| |||||||||    
T  27629657 ccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgccaaggt 27629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 42495926 - 42496016
Alignment:
Q  80 tttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||| | ||| |||| ||||||  |||| | |||||||| ||| ||||| ||||| ||||||||||||||| |||||||||||||||||    
T  42495926 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttacccctc 42496016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 33500635 - 33500562
Alignment:
Q  2 gcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacc 75  Q
    ||||| ||| |||||||||||||||||| ||||||| || |||||||||||||||| |  |||| |||||||||    
T  33500635 gcactgaagatcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttacc 33500562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7879759 - 7879675
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttaca 87  Q
    |||||| |||||||||||||||||||||| ||||||| || ||||||  ||| |||| || |||| || ||||||| ||||||||||    
T  7879759 tgcactgaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttaccttgttttttaca 7879675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 33871924 - 33872070
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||| ||||||| ||||||||||||||| || ||||||  ||| |||| || |||| || |||| |  | |||||||| ||| || | |||    
T  33871924 tgcactaaagctctcgcatacacagggtctgggaaggggtcccacca--tttggtgtattgtacgcagccttatcctg-tttttacacaagaggttgttt 33872020  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccag 150  Q
    |||  |||| | |||| ||| ||| ||||||||||| |||||||||||||    
T  33872021 ccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccag 33872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 19266564 - 19266426
Alignment:
Q  8 aagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaac 107  Q
    |||||||||||||||||||||| |||||||  | |||| |  ||| |||| || |||| || ||||||  |||||||||  |||||||||||| ||  ||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaa--tttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggac 19266467  T
Q  108 ttaatcccgtgacatttaagtcacatgaccacaactttacc 148  Q
    || | |||  ||| ||| ||||||||||| |||||||||||    
T  19266466 ttgaacccacgacctttcagtcacatgacaacaactttacc 19266426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 25198720 - 25198679
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    ||||| ||||| ||||||||||||||||||||||||||||||    
T  25198720 agtcatatgacaacaactttaccagttacgccaaggttaccc 25198679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 36602568 - 36602535
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctggga 34  Q
    ||||||||||||||||||||||||||||||||||    
T  36602568 tgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18512467 - 18512515
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 49  Q
    ||||| ||||||||||||||||||||||| ||||||| || ||||||||    
T  18512467 tgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 18512515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39124016 - 39123960
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 57  Q
    ||||| ||||||||| ||||||||||||| ||||||| || ||||||||||| ||||    
T  39124016 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgt 39123960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 42495876 - 42495912
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaagg 37  Q
    ||||||||||||||||||||||||||||| |||||||    
T  42495876 tgcactaaagctcccgcatacgcagggtccgggaagg 42495912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 3469190 - 3469245
Alignment:
Q  2 gcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 57  Q
    |||||||||||||||||||| |||||||| |||||| || || |||||||| ||||    
T  3469190 gcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgt 3469245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 27889336 - 27889379
Alignment:
Q  7 aaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||| ||||||| || |||||||||    
T  27889336 aaagctcccgcatacgcagggtccgggaaggggtcccaccattt 27889379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 28362165 - 28362316
Alignment:
Q  7 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaa 106  Q
    ||||||||| |||| ||| |||||||||||| || ||||||  ||| |||| || |||| || |||||| ||||||||||| ||| |||  |||| |  |    
T  28362165 aaagctcccacatatgcaaggtctgggaaggggtcccacca--tttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctagga 28362262  T
Q  107 cttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaagg 161  Q
    ||| | || ||||| ||| || |||||||| ||||||||||| ||| ||||||||    
T  28362263 cttgaacctgtgacctttcagccacatgacaacaactttacc-gttgcgccaagg 28362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 170
Target Start/End: Original strand, 34626225 - 34626388
Alignment:
Q  4 actaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttcca 103  Q
    |||||||||||||||||||||||||| |||||||  | ||||||  ||| |||| ||  ||| || ||||||  | |||||||| | | |||| ||||||    
T  34626225 actaaagctcccgcatacgcagggtccgggaagggatcccacca--tttggtgtattgaacgcagccttaccctg-tttttacacaggaggctgtttcca 34626321  T
Q  104 aaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
      |||| |  | ||| | ||| | ||||||||| ||||||||||||||| ||| |||||||||||||    
T  34626322 ggacttgaatctgtggcctttcaatcacatgacaacaactttaccagttgcgctaaggttacccctc 34626388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 7794596 - 7794682
Alignment:
Q  79 ttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttac 165  Q
    ||||||||| ||| |||| ||||||  |||| | |||||||| ||  |||||||| || ||||||||||||||| ||| ||||||||    
T  7794596 ttttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcgctaaggttac 7794682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 14099030 - 14099165
Alignment:
Q  11 ctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaactta 110  Q
    |||| ||||||| |||||  ||||||| || |||||||||   |||| || |||| ||||||| |  |||||||||| ||  |||||||||||  ||||     
T  14099030 ctcctgcatacgtagggttcgggaaggggtcccaccatttg--gtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttc 14099127  T
Q  111 atcccgtgacatttaagtcacatgaccacaactttacc 148  Q
    | ||| |||| ||| ||||||||||| |||||||||||    
T  14099128 aacccatgacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 14409047 - 14409182
Alignment:
Q  11 ctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaactta 110  Q
    |||| ||||||| |||||  ||||||| || |||||||||   |||| || |||| ||||||| |  |||||||||| ||  |||||||||||  ||||     
T  14409047 ctcctgcatacgtagggttcgggaaggggtcccaccatttg--gtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttc 14409144  T
Q  111 atcccgtgacatttaagtcacatgaccacaactttacc 148  Q
    | ||| |||| ||| ||||||||||| |||||||||||    
T  14409145 aacccatgacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 2663068 - 2663113
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttacccctcg 171  Q
    |||||||| || |||||||||| |||| ||||||||||||||||||    
T  2663068 agtcacataacaacaactttactagttgcgccaaggttacccctcg 2663113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42391114 - 42391163
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  42391114 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 42391163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 25434141 - 25434113
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtc 29  Q
    |||||||||||||||||||||||||||||    
T  25434141 tgcactaaagctcccgcatacgcagggtc 25434113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 12221935 - 12222088
Alignment:
Q  7 aaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaa 106  Q
    ||||||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||||||||| ||| |||| ||||||| |    
T  12221935 aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaaga 12222034  T
Q  107 cttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaag 160  Q
    ||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||    
T  12222035 cttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 12222088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 29355869 - 29356039
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||| || |||| || |||| || ||||||  |||| ||||| ||| |||| |||    
T  29355869 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagaggctgttt 29355968  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaa-ctttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||  ||||||||||  ||||||||||||||||    
T  29355969 ccaggacttgaacccgtgacctttcagtcacatgacaacaatttttaccagttgtgccaaggttacccctc 29356039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 1347083 - 1346918
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| |||||||| |||    
T  1347083 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagtggctgttt 1346988  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  1346987 ccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1346918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 1354771 - 1354938
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || ||||||  |||||  ||| ||| |||| |||    
T  1354771 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgttt 1354866  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctcgt 172  Q
    |||  |||| | || ||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  1354867 ccaggacttgaaccagtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctcgt 1354938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 3815091 - 3815256
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||| ||||||||| |||||  ||||| | || |||||||||   |||| || |||| |||| ||||   ||||||||| ||  | || |||    
T  3815091 tgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttg--gtgtattgtacgcagtcgtaccatattttttacacaatagtctgttt 3815188  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccc 168  Q
    |||  |||| | |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  3815189 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaaggttacccc 3815256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12886034 - 12885978
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 57  Q
    ||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||    
T  12886034 tgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgt 12885978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 9161245 - 9161077
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||| |||||||||||||||| | ||||| || |||||||| ||  ||| || |||| || |||| ||   |||||||| ||| |||| |||    
T  9161245 tgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagcctta-ctctgtttttacacaagaggctgttt 9161147  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | || ||||| ||| ||||||||||| |||||||||||  || || ||||||||||||||    
T  9161146 ccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccgattgcgtcaaggttacccctc 9161077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 14553626 - 14553484
Alignment:
Q  9 agctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctatttccaaaact 108  Q
    ||||||||||||| ||||||||  ||||| || |||||| |||| |||| ||||||  || ||||||   ||||||||| |||  ||||||||||  |||    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggact 14553527  T
Q  109 taatcccgtgacatttaagtcacatgaccacaactttaccagtt 152  Q
    | | || ||||| ||| ||||||||||| |||||||||||||||    
T  14553526 tgaacctgtgaccttt-agtcacatgacaacaactttaccagtt 14553484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 8409253 - 8409197
Alignment:
Q  114 ccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||| ||| |||||||| || ||||||||||||||| |||||||||||||||||    
T  8409253 ccgtgacctttcagtcacattacaacaactttaccagttgcgccaaggttacccctc 8409197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 32579543 - 32579497
Alignment:
Q  4 actaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||| |||||||||||||||| || |||||||||    
T  32579543 actaaagctcccgcatatgcagggtctgggaaggggtcccaccattt 32579497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6808516 - 6808468
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatt 49  Q
    ||||||||||||||||||||| ||||||| ||||||| || ||||||||    
T  6808516 tgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12892130 - 12892066
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacg 65  Q
    |||||||||||||||||||| || ||||| ||||||| || |||||||| || |||| |||||||    
T  12892130 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacg 12892066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 14975169 - 14975261
Alignment:
Q  78 gttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||||||||| ||| |||| ||||||  |||| |  ||||||| ||  ||||||||||| ||||||||||| ||| ||||||||||| |||||    
T  14975169 gttttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgccaaggttatccctc 14975261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 20400729 - 20400625
Alignment:
Q  62 tacgtagtcttacctagttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaagg 161  Q
    |||| |||||||||  |||||||||| ||| |  | |||||| ||||| | || ||||| ||| ||||||||||| |||||| ||||| || ||||||||    
T  20400729 tacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgacaacaactataccaattgcgccaagg 20400630  T
Q  162 ttacc 166  Q
    |||||    
T  20400629 ttacc 20400625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 32728234 - 32728334
Alignment:
Q  67 agtcttacctagttttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacc 166  Q
    |||||||||  |||||||||| ||| || | |||||||||||| |  | ||||| ||| ||||||||||| ||||||||||  ||| | |||||||||||    
T  32728234 agtcttaccctgttttttacataagaggttgtttccaaaacttgaatctgtgacctttcagtcacatgacaacaactttactcgttccaccaaggttacc 32728333  T
Q  167 c 167  Q
    |    
T  32728334 c 32728334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 24097696 - 24097649
Alignment:
Q  3 cactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||||||| |||||||||||||||| ||||||| || |||||||||    
T  24097696 cactaaagcttccgcatacgcagggtccgggaaggggtcccaccattt 24097649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 29016301 - 29016332
Alignment:
Q  6 taaagctcccgcatacgcagggtctgggaagg 37  Q
    ||||||||||||||||||||||||||||||||    
T  29016301 taaagctcccgcatacgcagggtctgggaagg 29016332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 1941853 - 1941807
Alignment:
Q  126 agtcacatgaccacaactttaccagttacgccaaggttacccctcgt 172  Q
    ||||| ||||| ||||||||||||||| | |||||||||||||||||    
T  1941853 agtcagatgacaacaactttaccagttgcaccaaggttacccctcgt 1941807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 33922955 - 33923009
Alignment:
Q  116 gtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||| ||| ||||| ||||| ||||||||||| ||| |||||||||||||||||    
T  33922955 gtgacttttcagtcaaatgacaacaactttaccggttgcgccaaggttacccctc 33923009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 3116146 - 3116199
Alignment:
Q  4 actaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgt 57  Q
    ||||||||||||||||||||| |||| | ||||| || ||||||||||| ||||    
T  3116146 actaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgt 3116199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 8417481 - 8417444
Alignment:
Q  115 cgtgacatttaagtcacatgaccacaactttaccagtt 152  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  8417481 cgtgacatttcagtcacatgacaacaactttaccagtt 8417444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 10734922 - 10734955
Alignment:
Q  4 actaaagctcccgcatacgcagggtctgggaagg 37  Q
    |||||||||||||||||||||||||| |||||||    
T  10734922 actaaagctcccgcatacgcagggtccgggaagg 10734955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13267846 - 13267797
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||| ||||||||||||||||||||||  |||||| || |||||||||    
T  13267846 tgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 13267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 24734640 - 24734591
Alignment:
Q  117 tgacatttaagtcacatgaccacaactttaccagttacgccaaggttacc 166  Q
    |||| ||| ||||||||||| ||||||||||||||| |||||| ||||||    
T  24734640 tgacctttcagtcacatgacaacaactttaccagttgcgccaatgttacc 24734591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 2166424 - 2166587
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||| |||   |||||| ||||||| || |||||||| || |||| || |||| |  |||| |  || ||||||| ||| || | |||    
T  2166424 tgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgttt 2166523  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttac 165  Q
    |||  |||| | |||||||| ||| |||||||| || |||||||||| |||| || |||||||||    
T  2166524 ccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 2166587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 2178057 - 2178220
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    |||||||||||||||| |||   |||||| ||||||| || |||||||| || |||| || |||| |  |||| |  || ||||||| ||| || | |||    
T  2178057 tgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgttt 2178156  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttac 165  Q
    |||  |||| | |||||||| ||| |||||||| || |||||||||| |||| || |||||||||    
T  2178157 ccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 2178220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 13905103 - 13905158
Alignment:
Q  113 cccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccct 169  Q
    |||||||| ||| ||||||||||| ||||||||||| ||| |||||||||| |||||    
T  13905103 cccgtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggttccccct 13905158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 59100 - 58936
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||| || |||| |||||||||  |||||||| | ||| |||| |||    
T  59100 tgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttatacaagaggctgttt 59001  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttac 165  Q
    |||  |||| | |||||||| ||| ||||||||||| | || |||||||||| | ||||||||||    
T  59000 ccaggacttgaacccgtgacctttcagtcacatgacaataagtttaccagttgctccaaggttac 58936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 24786 - 24948
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||  ||||||| || |||||||||   ||||||| |||| || ||||||  |||||||||| ||| |||| ||     
T  24786 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttg--gtgtgttgtacgcagccttaccctgttttttacacaagaggctgttg 24883  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
         |||| | ||| |||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  24884 -----acttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 24948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 46952 - 46794
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||  ||| |||| || |||| |  ||||||   ||||||||| ||| || | |||    
T  46952 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcaaccttaccctattttttacacaagaggttgttt 46855  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaagg 161  Q
    |||  |||| | |||||||| ||  ||||||||||| |||||||||||| || ||||||||    
T  46854 ccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcgccaagg 46794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46721 - 46771
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccatttt 51  Q
    |||| |||||||||||||||||||||||||||||||| || ||||||||||    
T  46721 tgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccatttt 46771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 13038 - 13202
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||||    |||| || |||| || ||||||| |||||| ||  ||| |||| |||    
T  13038 tgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcg--gtgtattgtacgcagccttaccttgttttt-acgcaagaggctgttt 13134  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccc 168  Q
    |||  |||| | || ||||| ||| ||||||||||| ||||||||||| ||| |||||||||||||||    
T  13135 ccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttacccc 13202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 30698 - 30533
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||   |||| || |||| || | ||||  |||||  ||| ||| |||| |||    
T  30698 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttg--gtgtattgtacgcagccctaccctgtttt--acacaagaggctgttt 30603  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    |||  |||| | || ||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  30602 ccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 30533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 10931 - 10773
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||  ||| |||| ||  ||| || | ||||  |||||||||| ||| || | |||    
T  10931 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattggacgcagccctaccctgttttttacacaagaggttgttt 10834  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaagg 161  Q
     || | ||| | |||||||| ||  ||||||||||| ||||||||||||||| | ||||||    
T  10833 tcagaccttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaagg 10773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 83901 - 83829
Alignment:
Q  98 tttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||| |||| | |||||||| ||| ||||||||||| |||||||||| |||| |||||||||||||||||    
T  83901 tttccaagacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggttacccctc 83829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 10140 - 10226
Alignment:
Q  81 ttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    ||||||| ||| |||| ||||||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| || |||||||||||    
T  10140 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 20468 - 20554
Alignment:
Q  81 ttttacaaaagtggctatttccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttaccc 167  Q
    ||||||| ||| |||| ||||||  |||| | |||||||| ||| ||||||||||| ||||||||||||||| || |||||||||||    
T  20468 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 20554  T

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Target: scaffold0187; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 8953 - 8899
Alignment:
Q  116 gtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||||| ||||||||||| ||||||| ||| ||| |||||||||||||||||    
T  8953 gtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttacccctc 8899  T

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Target: scaffold0187; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 19281 - 19227
Alignment:
Q  116 gtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacccctc 170  Q
    ||||||||| ||||||||||| ||||||| ||| ||| |||||||||||||||||    
T  19281 gtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttacccctc 19227  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 226531 - 226583
Alignment:
Q  114 ccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggttacc 166  Q
    ||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||    
T  226531 ccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 226583  T

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Target: scaffold0223 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 11250 - 11093
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattttttgtgtgttatacgtagtcttacctagttttttacaaaagtggctattt 100  Q
    ||||||| |||||||||||| |||||||| ||||||| || ||||||  ||| |||| || || | || ||||| |  | ||||||| ||| |||| |||    
T  11250 tgcactagagctcccgcatatgcagggtccgggaaggtgtcccacca--tttggtgtattgtaagcagccttactt--tgttttacacaagaggctgttt 11155  T
Q  101 ccaaaacttaatcccgtgacatttaagtcacatgaccacaactttaccagttacgccaaggtt 163  Q
    |||  |||| | |||||||| ||| |||||||| |  ||||||||||||||| ||||||||||    
T  11154 ccaggacttgaacccgtgacctttcagtcacat-agaacaactttaccagttgcgccaaggtt 11093  T

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Target: scaffold1176 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1601 - 1650
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||||||||||||||||||| ||||| ||||||| || ||| |||||    
T  1601 tgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcattt 1650  T

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Target: scaffold0180 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24147 - 24196
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  24147 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 24196  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 72881 - 72930
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    |||||||||||||||||||||||||| || ||||||| || | |||||||    
T  72881 tgcactaaagctcccgcatacgcaggttccgggaaggggtactaccattt 72930  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 48648 - 48697
Alignment:
Q  1 tgcactaaagctcccgcatacgcagggtctgggaaggagttccaccattt 50  Q
    ||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  48648 tgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 48697  T

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