View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14780_low_40 (Length: 208)
Name: NF14780_low_40
Description: NF14780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14780_low_40 |
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Alignment Details
Target: chr7 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 43536998 - 43537189
Alignment:
| Q |
1 |
tttggagttagagatttcatcaagaggaacagagaatccagtaaaggaaaatgagagtcccaaacttgaagctctactaagagcagcaccactattaacc |
100 |
Q |
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| T |
43536998 |
tttggagttagagatttcatcaagaggaacagagaatccagtaaaggaaaatgagagtcccaaacttgaagctctactaagagcagcaccactattaacc |
43537097 |
T |
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| Q |
101 |
tcatgatccaaatcaaccttcaaagaagtctggacactcctcgccttccttatgtgtgtatttcttccaccgggggatgccctccttgatattct |
195 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
43537098 |
tc---atccaaatcaaccttcaaagaagtctggacactcctcgccttccttatgtgtgtatttcttccaccgggggatgccctccttgattttct |
43537189 |
T |
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