View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14781_low_2 (Length: 568)

Name: NF14781_low_2
Description: NF14781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14781_low_2
NF14781_low_2
[»] chr5 (22 HSPs)
chr5 (212-552)||(42516363-42516705)
chr5 (212-552)||(42523011-42523357)
chr5 (406-552)||(42507037-42507184)
chr5 (88-152)||(42522885-42522949)
chr5 (97-152)||(21259804-21259859)
chr5 (103-152)||(1138601-1138650)
chr5 (103-152)||(15855885-15855934)
chr5 (103-152)||(16472997-16473046)
chr5 (103-152)||(21261985-21262034)
chr5 (103-152)||(35420692-35420741)
chr5 (98-149)||(12744871-12744922)
chr5 (103-149)||(12807956-12808002)
chr5 (98-152)||(13754366-13754420)
chr5 (103-152)||(1456102-1456151)
chr5 (103-152)||(24397325-24397375)
chr5 (98-152)||(37552383-37552437)
chr5 (98-152)||(37655227-37655280)
chr5 (103-152)||(4266024-4266073)
chr5 (103-152)||(20476473-20476522)
chr5 (111-152)||(35806977-35807018)
chr5 (103-152)||(43539149-43539198)
chr5 (98-154)||(735316-735372)
[»] chr2 (20 HSPs)
chr2 (103-153)||(6605776-6605826)
chr2 (103-152)||(3116918-3116967)
chr2 (103-152)||(9933649-9933698)
chr2 (103-152)||(12850622-12850671)
chr2 (103-152)||(24101912-24101961)
chr2 (103-152)||(34490498-34490547)
chr2 (103-152)||(45408667-45408716)
chr2 (103-154)||(2818706-2818757)
chr2 (103-154)||(22269762-22269813)
chr2 (98-152)||(9281422-9281476)
chr2 (103-152)||(16705775-16705824)
chr2 (103-152)||(34455927-34455976)
chr2 (103-154)||(7737104-7737156)
chr2 (103-152)||(1924060-1924110)
chr2 (103-152)||(20892926-20892976)
chr2 (103-152)||(23835918-23835968)
chr2 (103-152)||(9850838-9850886)
chr2 (88-125)||(17434745-17434782)
chr2 (103-151)||(27920615-27920663)
chr2 (103-154)||(42713857-42713909)
[»] chr4 (19 HSPs)
chr4 (103-152)||(35360718-35360767)
chr4 (103-152)||(55107566-55107615)
chr4 (98-152)||(27434652-27434706)
chr4 (103-152)||(530749-530798)
chr4 (103-152)||(1298954-1299003)
chr4 (103-152)||(52824281-52824330)
chr4 (103-154)||(24294507-24294558)
chr4 (98-152)||(4895014-4895068)
chr4 (103-152)||(13204419-13204468)
chr4 (103-152)||(18417699-18417748)
chr4 (103-152)||(20435220-20435269)
chr4 (103-152)||(23482001-23482050)
chr4 (103-154)||(23928647-23928698)
chr4 (103-154)||(32318800-32318851)
chr4 (103-149)||(4552830-4552876)
chr4 (103-149)||(16995634-16995680)
chr4 (103-152)||(21048785-21048833)
chr4 (103-152)||(28809927-28809976)
chr4 (98-154)||(47465059-47465115)
[»] chr1 (28 HSPs)
chr1 (103-152)||(28244000-28244049)
chr1 (103-152)||(48645094-48645143)
chr1 (103-152)||(2125150-2125199)
chr1 (103-152)||(3607809-3607858)
chr1 (103-152)||(5189511-5189560)
chr1 (103-152)||(9895295-9895344)
chr1 (103-152)||(19954991-19955040)
chr1 (103-152)||(42561375-42561424)
chr1 (103-152)||(50627173-50627222)
chr1 (98-152)||(1387820-1387874)
chr1 (98-152)||(2854607-2854661)
chr1 (98-152)||(23698577-23698631)
chr1 (98-152)||(48954289-48954343)
chr1 (103-152)||(6079426-6079475)
chr1 (103-152)||(14387095-14387144)
chr1 (103-152)||(19797061-19797110)
chr1 (103-152)||(27241004-27241053)
chr1 (100-148)||(28447950-28447998)
chr1 (103-154)||(27670183-27670234)
chr1 (103-152)||(9978131-9978181)
chr1 (103-152)||(15324668-15324718)
chr1 (103-152)||(27928377-27928427)
chr1 (103-152)||(47940650-47940700)
chr1 (103-152)||(18651330-18651379)
chr1 (103-154)||(957628-957680)
chr1 (104-152)||(16755267-16755315)
chr1 (103-152)||(27926330-27926381)
chr1 (103-147)||(29598370-29598414)
[»] chr3 (35 HSPs)
chr3 (103-154)||(13078243-13078294)
chr3 (103-152)||(3970571-3970620)
chr3 (103-152)||(10441338-10441387)
chr3 (103-152)||(12838119-12838168)
chr3 (103-152)||(21969237-21969286)
chr3 (103-152)||(21991673-21991722)
chr3 (103-152)||(25488421-25488470)
chr3 (103-152)||(25561053-25561102)
chr3 (103-152)||(36329260-36329309)
chr3 (103-152)||(36657513-36657562)
chr3 (103-152)||(36822840-36822889)
chr3 (98-149)||(43150525-43150576)
chr3 (98-152)||(12789648-12789702)
chr3 (98-152)||(26906496-26906550)
chr3 (98-152)||(36278831-36278885)
chr3 (98-152)||(37506201-37506255)
chr3 (98-152)||(45487841-45487895)
chr3 (98-152)||(46664218-46664272)
chr3 (103-152)||(10017156-10017205)
chr3 (103-152)||(32237474-32237523)
chr3 (103-152)||(44920726-44920775)
chr3 (98-149)||(4567227-4567277)
chr3 (98-149)||(44611456-44611507)
chr3 (103-152)||(4072353-4072403)
chr3 (103-152)||(10117557-10117607)
chr3 (103-152)||(22101206-22101256)
chr3 (103-152)||(25446291-25446341)
chr3 (103-152)||(55340373-55340423)
chr3 (107-152)||(1476635-1476680)
chr3 (103-152)||(38125259-38125308)
chr3 (107-152)||(42105467-42105512)
chr3 (103-152)||(45712983-45713032)
chr3 (98-149)||(13724062-13724114)
chr3 (103-154)||(39850424-39850476)
chr3 (103-154)||(43639161-43639213)
[»] chr7 (19 HSPs)
chr7 (98-152)||(34052321-34052375)
chr7 (99-149)||(35665692-35665742)
chr7 (103-152)||(30259146-30259195)
chr7 (103-152)||(30594735-30594784)
chr7 (103-152)||(38883263-38883312)
chr7 (107-154)||(48103408-48103455)
chr7 (103-152)||(24836062-24836111)
chr7 (103-149)||(25742511-25742557)
chr7 (98-152)||(40358157-40358211)
chr7 (103-152)||(3953122-3953171)
chr7 (103-152)||(10936550-10936599)
chr7 (103-152)||(35339358-35339407)
chr7 (103-152)||(45997588-45997637)
chr7 (103-154)||(20184318-20184370)
chr7 (103-154)||(37093808-37093859)
chr7 (103-152)||(9285794-9285843)
chr7 (103-152)||(9289861-9289910)
chr7 (98-154)||(33749683-33749740)
chr7 (103-152)||(31231694-31231745)
[»] scaffold0122 (1 HSPs)
scaffold0122 (103-152)||(45876-45925)
[»] chr8 (15 HSPs)
chr8 (103-152)||(29781039-29781088)
chr8 (103-152)||(40891055-40891104)
chr8 (92-150)||(4035785-4035843)
chr8 (103-152)||(38405180-38405230)
chr8 (98-152)||(38520060-38520114)
chr8 (98-152)||(38629516-38629570)
chr8 (103-152)||(33100725-33100774)
chr8 (103-154)||(8210363-8210414)
chr8 (98-152)||(12234508-12234563)
chr8 (103-154)||(40393763-40393814)
chr8 (103-152)||(4262056-4262105)
chr8 (103-152)||(24211358-24211407)
chr8 (103-152)||(37114280-37114329)
chr8 (5-37)||(13755995-13756027)
chr8 (109-149)||(14834755-14834795)
[»] chr6 (12 HSPs)
chr6 (103-152)||(885427-885476)
chr6 (103-152)||(8091104-8091153)
chr6 (103-152)||(11687223-11687272)
chr6 (103-152)||(15546674-15546723)
chr6 (103-152)||(29609043-29609092)
chr6 (98-152)||(3369027-3369081)
chr6 (103-149)||(7808654-7808700)
chr6 (98-152)||(21380016-21380070)
chr6 (103-152)||(13172653-13172702)
chr6 (103-152)||(20501748-20501797)
chr6 (98-152)||(31764400-31764454)
chr6 (103-154)||(14393601-14393655)
[»] scaffold0006 (1 HSPs)
scaffold0006 (89-149)||(72337-72397)
[»] scaffold0118 (1 HSPs)
scaffold0118 (103-150)||(14486-14533)
[»] scaffold0107 (1 HSPs)
scaffold0107 (98-152)||(51105-51159)
[»] scaffold0188 (1 HSPs)
scaffold0188 (103-154)||(7126-7177)
[»] scaffold0086 (1 HSPs)
scaffold0086 (103-149)||(48171-48217)
[»] scaffold0653 (1 HSPs)
scaffold0653 (103-152)||(3473-3522)
[»] scaffold0137 (1 HSPs)
scaffold0137 (103-152)||(10158-10206)
[»] scaffold0391 (1 HSPs)
scaffold0391 (88-124)||(3650-3686)


Alignment Details
Target: chr5 (Bit Score: 312; Significance: 1e-175; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 212 - 552
Target Start/End: Original strand, 42516363 - 42516705
Alignment:
Q  212 gcagctagctagagaattgtacttaagtagttattttgtcaaaattt--aacaaaaaatttcgattgtgcaattagtttttattaaccctataattatgt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42516363 gcagctagctagagaattgtacttaagtagttattttgtcaaaaattgtaacaaaaaatttcgattgtgcaattagtttttattaaccctataattatgt 42516462  T
Q  310 atattgatgatatactttaaccaaaagttaggatatatataataagttgtgccagccctaatatttcacattcttcaaaacttcaataaaaaatcgatat 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||| |||||||    
T  42516463 atattgatgatatactttaaccaaaagttaggatatatataataagttgtgccagcccaaatatatcacattcttcaaaacttcaatcaaaattcgatat 42516562  T
Q  410 atttgtgcatcgctttattctttttctccacaaatatcacacaaaccttacttactctcaattctctcctatggcgtcaaaatccatccttggctttatc 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42516563 atttgtgcatcgctttattctttttctccacaaatatcacacaaaccttacttactctcaattctctcctatggcgtcaaaatccatccttggctttatc 42516662  T
Q  510 actctctttctccttacactttgtattacttcctccattcatc 552  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42516663 actctctttctccttacactttgtattacttcctccattcatc 42516705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 212 - 552
Target Start/End: Original strand, 42523011 - 42523357
Alignment:
Q  212 gcagctagctagagaattgtacttaagtagttat--tttgtcaaaattt--aacaaaaaatttcgattgtgcaattagtttttattaaccctataattat 307  Q
    |||||||||| |||||||||||||||||||||||  |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42523011 gcagctagctggagaattgtacttaagtagttatgttttgtcaaaaattgtaacaaaaaatttcgattgtgcaattagtttttattaaccctataattat 42523110  T
Q  308 gtatattgatgatatactttaaccaaaagttaggatat--atataataagttgtgccagccctaatatttcacattcttcaaaacttcaataaaaaatcg 405  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42523111 gtatattgatgatatactttaaccaaaagttaggatatatatataataagttgtgccagccctaatatttcacattcttcaaaacttcaatcaaaaatcg 42523210  T
Q  406 atatatttgtgcatcgctttattctttttctccacaaatatcacacaaaccttacttactctcaattctctcctatggcgtcaaaatccatccttggctt 505  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42523211 atatatttgtgcatcgctttattctttttctccacaaatatcgcacaaaccttacttactctcaattctctcctatggcgtcaaaatccatccttggctt 42523310  T
Q  506 tatcactctctttctccttacactttgtattacttcctccattcatc 552  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42523311 tatcactctctttctccttacactttgtattacttcctccattcatc 42523357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 406 - 552
Target Start/End: Original strand, 42507037 - 42507184
Alignment:
Q  406 atatatttgtgcatcgctttattctttttctccacaaatatcacacaaaccttacttactctcaatt--ctctcctatggcgtcaaaatccatccttggc 503  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  42507037 atatatttgtgcatcgcattattctttttctccacaaatatcacaaaaacct-acttactttcaattttctctcgtatggcgtcaaaatccatccttggc 42507135  T
Q  504 tttatcactctctttctccttacactttgtattacttcctccattcatc 552  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42507136 tttatcactctctttctccttacactttgtattacttcctccattcatc 42507184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 42522885 - 42522949
Alignment:
Q  88 actaaattcatcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42522885 actaaatttatcgtgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 42522949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 152
Target Start/End: Original strand, 21259804 - 21259859
Alignment:
Q  97 atcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||| ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  21259804 atcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 21259859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 1138650 - 1138601
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  1138650 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 1138601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 15855934 - 15855885
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  15855934 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaa 15855885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 16473046 - 16472997
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  16473046 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaa 16472997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 21262034 - 21261985
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  21262034 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 21261985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 35420692 - 35420741
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  35420692 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaa 35420741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 12744922 - 12744871
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    |||| ||||||||||||||||||||||| ||| || ||||||||||||||||    
T  12744922 tcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaa 12744871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 12808002 - 12807956
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||    
T  12808002 attttttcaaagtttgttatatctaaaaaatatgtatttttagttaa 12807956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 13754366 - 13754420
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| |||||||||||||||| |||||| ||| || |||||||||||||||||||    
T  13754366 tcataattttctcaaagtttgctatatcaaaaaaatatgtatttttagttaagaa 13754420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 1456102 - 1456151
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || ||||||||||||| |||||    
T  1456102 attttctcaaagtttgttatatccaaaaaatatgtatttttagtcaagaa 1456151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 24397325 - 24397375
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  24397325 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 24397375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 37552383 - 37552437
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||| | ||| || ||||||||||||| |||||    
T  37552383 tcataattttctcaaagtttgttataacaaaaaaatatgtatttttagtcaagaa 37552437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 37655227 - 37655280
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  37655227 tcataattttctcaaagtttgttataac-aaaaaatatgtatttttagttaagaa 37655280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 4266073 - 4266024
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||| ||||||||||| ||| ||| || |||||||||||||||||||    
T  4266073 attttcttaaagtttgttacatccaaaaaatatgtatttttagttaagaa 4266024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 20476522 - 20476473
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||| |||||||||||  || || |||||||||||||||||||    
T  20476522 attttctcaaaatttgttatatcacaaaaatatgtatttttagttaagaa 20476473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 35807018 - 35806977
Alignment:
Q  111 aaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||  ||| ||||||||||||||||||||||    
T  35807018 aaagtttgttatattcaaaaaagatgtatttttagttaagaa 35806977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 43539198 - 43539149
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||| ||||| ||||    
T  43539198 attttctcaaagtttgttatatccaaaaaatatgtatttatagttcagaa 43539149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 735372 - 735316
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    |||| ||||||||||||||||||||||  ||  || ||||||||||| |||||||||    
T  735372 tcataattttctcaaagtttgttatattcaagaaatatgtatttttaattaagaatc 735316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 6605826 - 6605776
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaat 153  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  6605826 attttctcaaagtttgttatatccaaataatatgtatttttagttaagaat 6605776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 3116967 - 3116918
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  3116967 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 3116918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 9933649 - 9933698
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||||||    
T  9933649 attttctcaaagtttattatatctaaaaaatatgtatttttagttaagaa 9933698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 12850622 - 12850671
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  12850622 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 12850671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 24101912 - 24101961
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  24101912 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 24101961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 34490547 - 34490498
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  34490547 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 34490498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 45408716 - 45408667
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  45408716 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 45408667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 2818757 - 2818706
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||||    
T  2818757 attttctcaaagtttgatatatccaaaaaatatgtatttttagttaagaatc 2818706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 22269813 - 22269762
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||| ||||    
T  22269813 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaatc 22269762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 9281422 - 9281476
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||    
T  9281422 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 9281476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 16705824 - 16705775
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||||||||    
T  16705824 attttatcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 16705775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 34455976 - 34455927
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || ||||||||||| |||||||    
T  34455976 attttctcaaagtttgttatatccaaaaaatatgtatttttaattaagaa 34455927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 7737156 - 7737104
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaatc 154  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  7737156 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaatc 7737104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 1924060 - 1924110
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  1924060 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 1924110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 20892976 - 20892926
Alignment:
Q  103 attttctcaaagtttgttatatcta-aataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| | || || |||||||||||||||||||    
T  20892976 attttctcaaagtttgttatatccataaaaatatgtatttttagttaagaa 20892926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 23835968 - 23835918
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  23835968 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 23835918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 9850838 - 9850886
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||| ||||||||||| ||| || |||||||||||||||||||    
T  9850838 attttctcaaaatttgttatatc-aaaaaatatgtatttttagttaagaa 9850886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 17434745 - 17434782
Alignment:
Q  88 actaaattcatcatgattttctcaaagtttgttatatc 125  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  17434745 actaaattcaccataattttctcaaagtttgttatatc 17434782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 27920663 - 27920615
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaaga 151  Q
    ||||| ||||||||||||||||| ||| || ||||| ||||||||||||    
T  27920663 attttttcaaagtttgttatatccaaaaaatatgtagttttagttaaga 27920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 42713857 - 42713909
Alignment:
Q  103 attttctcaaagtttgttatatctaaataag-atgtatttttagttaagaatc 154  Q
    ||||||||||||||| ||||||| ||| ||  |||||||||||||||||||||    
T  42713857 attttctcaaagtttattatatccaaaaaaatatgtatttttagttaagaatc 42713909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 35360767 - 35360718
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||    
T  35360767 attttctcaaagtttgttatatctaaaaaatatgtatttttagttaagaa 35360718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 55107615 - 55107566
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  55107615 attttctcaaagtttgttatatccaaataatatgtatttttagttaagaa 55107566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 27434706 - 27434652
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  27434706 tcataattttctcaaagtttgttatatccaaaaaaaatgtatttttagttaagaa 27434652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 530749 - 530798
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  530749 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 530798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 1299003 - 1298954
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  1299003 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 1298954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 52824330 - 52824281
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||||||    
T  52824330 attttctcaaagtttattatatctaaaaaatatgtatttttagttaagaa 52824281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 24294558 - 24294507
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    ||||||||||||||||||||||| ||| || ||||||||||| |||||||||    
T  24294558 attttctcaaagtttgttatatcaaaaaaatatgtatttttaattaagaatc 24294507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 4895068 - 4895014
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||  ||| || |||||||||||||||||||    
T  4895068 tcataattttctcaaagtttgttatattcaaaaaatatgtatttttagttaagaa 4895014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 13204468 - 13204419
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||||| |||||||||||||||| ||| || |||||||||||||||||||    
T  13204468 attttcacaaagtttgttatatccaaaaaatatgtatttttagttaagaa 13204419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 18417748 - 18417699
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || || ||||||||||||||||    
T  18417748 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 18417699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 20435220 - 20435269
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||||||| |||||||||||||| ||| || |||||||||||||||||||    
T  20435220 attttctcgaagtttgttatatccaaaaaatatgtatttttagttaagaa 20435269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 23482001 - 23482050
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||| |||||||||| |||| ||||||||| ||||||||||||    
T  23482001 attttctcaaaatttgttatatataaaaaagatgtatatttagttaagaa 23482050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 23928647 - 23928698
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    ||||||||||| ||||||||||| ||| || || ||||||||||||||||||    
T  23928647 attttctcaaaatttgttatatccaaaaaaaatatatttttagttaagaatc 23928698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 32318800 - 32318851
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    ||||||||||||||||||||||| ||| || || |||||||| |||||||||    
T  32318800 attttctcaaagtttgttatatccaaaaaatatatatttttaattaagaatc 32318851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 4552876 - 4552830
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    ||||||||||||||||||||||| ||| || || |||||||||||||    
T  4552876 attttctcaaagtttgttatatccaaaaaatatttatttttagttaa 4552830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 16995634 - 16995680
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    ||||| ||| ||||||||||||||||| |||||||||| ||||||||    
T  16995634 attttttcagagtttgttatatctaaaaaagatgtattgttagttaa 16995680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 21048785 - 21048833
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||||||| |||||||||||||| ||| || |||||||||||||||||||    
T  21048785 attttctcgaagtttgttatatc-aaaaaatatgtatttttagttaagaa 21048833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 28809927 - 28809976
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||| ||||||||||| ||| || |||||||| ||||||||||    
T  28809927 attttctcaaaatttgttatatccaaaaaatatgtatttctagttaagaa 28809976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 47465059 - 47465115
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    |||| ||||| | |||||||||||| |||||| ||||| ||||||||||||| ||||    
T  47465059 tcataatttttttaaagtttgttatctctaaacaagatatatttttagttaaaaatc 47465115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 28244049 - 28244000
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28244049 attttctcaaagtttgttatatccaaaaaagatgtatttttagttaagaa 28244000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 48645094 - 48645143
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||    
T  48645094 attttctcaaagtttgttatatctaaaaaatatgtatttttagttaagaa 48645143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 2125150 - 2125199
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  2125150 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaa 2125199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 3607809 - 3607858
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  3607809 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 3607858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 5189560 - 5189511
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  5189560 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 5189511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 9895344 - 9895295
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  9895344 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaa 9895295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 19954991 - 19955040
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  19954991 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 19955040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 42561375 - 42561424
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  42561375 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 42561424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 50627222 - 50627173
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  50627222 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 50627173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 1387874 - 1387820
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||| ||||||| ||| || |||||||||||||||||||    
T  1387874 tcataattttctcaaagtttattatatccaaaaaatatgtatttttagttaagaa 1387820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 2854607 - 2854661
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||    
T  2854607 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 2854661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 23698577 - 23698631
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||    
T  23698577 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 23698631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 48954289 - 48954343
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||    
T  48954289 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 48954343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 6079475 - 6079426
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || ||||||||||||| |||||    
T  6079475 attttctcaaagtttgttatatccaaaaaatatgtatttttagtgaagaa 6079426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 14387095 - 14387144
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||| ||||||| ||| || |||||||||||||||||||    
T  14387095 attttctcaaagtttattatatccaaaaaatatgtatttttagttaagaa 14387144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 19797061 - 19797110
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||||||||    
T  19797061 attttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 19797110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 27241004 - 27241053
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || || ||||||||||||||||    
T  27241004 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 27241053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 28447950 - 28447998
Alignment:
Q  100 atgattttctcaaagtttgttatatctaaataagatgtatttttagtta 148  Q
    |||||||||||||||||||||||||  ||| ||||| ||||||||||||    
T  28447950 atgattttctcaaagtttgttatattaaaaaaagatatatttttagtta 28447998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 27670234 - 27670183
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    ||||||||||||||| ||||||  ||| || |||||||||||||||||||||    
T  27670234 attttctcaaagttttttatattcaaaaaatatgtatttttagttaagaatc 27670183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 9978131 - 9978181
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  9978131 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 9978181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 15324718 - 15324668
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  15324718 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 15324668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 27928377 - 27928427
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  27928377 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 27928427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 47940650 - 47940700
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  47940650 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 47940700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 18651330 - 18651379
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||| ||||||||| ||||| || ||||||||||| |||||||    
T  18651330 attttctcaaaatttgttataactaaaaaaaatgtatttttatttaagaa 18651379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 957680 - 957628
Alignment:
Q  103 attttctcaaagtttgttatatc-taaataagatgtatttttagttaagaatc 154  Q
    |||||||||||||||||||||||  ||| || ||||| |||||||||||||||    
T  957680 attttctcaaagtttgttatatcaaaaaaaatatgtaattttagttaagaatc 957628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 16755315 - 16755267
Alignment:
Q  104 ttttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||| |||  | |||||||||||||||||||    
T  16755315 ttttttcaaagtttgttatatccaaaacatatgtatttttagttaagaa 16755267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 27926330 - 27926381
Alignment:
Q  103 attttctcaaagtttgttatatc--taaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||||   ||| || |||||||||||||||||||    
T  27926330 attttctcaaagtttgttatatccaaaaaaaatatgtatttttagttaagaa 27926381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 29598414 - 29598370
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagtt 147  Q
    ||||||||||||||||||||||  ||| || ||||||||||||||    
T  29598414 attttctcaaagtttgttatattaaaaaaatatgtatttttagtt 29598370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 13078243 - 13078294
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  13078243 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaatc 13078294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 3970571 - 3970620
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  3970571 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 3970620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 10441338 - 10441387
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  10441338 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 10441387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 12838168 - 12838119
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  12838168 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 12838119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 21969237 - 21969286
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  21969237 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 21969286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 21991673 - 21991722
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  21991673 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 21991722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 25488421 - 25488470
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  25488421 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 25488470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 25561102 - 25561053
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  25561102 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 25561053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 36329260 - 36329309
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  36329260 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 36329309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 36657513 - 36657562
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  36657513 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaa 36657562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 36822840 - 36822889
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  36822840 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 36822889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 43150576 - 43150525
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    |||| ||||||||||||||||||||||| ||| || ||||||||||||||||    
T  43150576 tcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaa 43150525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 12789702 - 12789648
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||| ||||||||||||||||| ||| || |||||||||||||||||||    
T  12789702 tcataattttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 12789648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 26906550 - 26906496
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||    
T  26906550 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 26906496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 36278831 - 36278885
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||    
T  36278831 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 36278885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 37506201 - 37506255
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| |||||||||||||||||||| || ||| || |||||||||||||||||||    
T  37506201 tcataattttctcaaagtttgttatctccaaaaaaaatgtatttttagttaagaa 37506255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 45487895 - 45487841
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| |||||||||| |||||||||||| ||| || |||||||||||||||||||    
T  45487895 tcataattttctcaatgtttgttatatccaaaaaatatgtatttttagttaagaa 45487841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 46664272 - 46664218
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||  ||| || |||||||||||||||||||    
T  46664272 tcataattttctcaaagtttgttatattaaaaaaatatgtatttttagttaagaa 46664218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 10017205 - 10017156
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||||||||    
T  10017205 attttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 10017156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 32237474 - 32237523
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || ||||||||||| |||||||    
T  32237474 attttctcaaagtttgttatatccaaaaaatatgtatttttaattaagaa 32237523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 44920726 - 44920775
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||| ||||||| ||| || |||||||||||||||||||    
T  44920726 attttctcaaagtttattatatccaaaaaatatgtatttttagttaagaa 44920775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 4567277 - 4567227
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    ||||| ||||||||| |||||||||||||||| ||| |||||||||||||||    
T  4567277 tcatggttttctcaatgtttgttatatctaaa-aaggtgtatttttagttaa 4567227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 44611456 - 44611507
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    |||| ||||||||||||||||||||||| ||| || || |||||||||||||    
T  44611456 tcataattttctcaaagtttgttatatcaaaaaaatatatatttttagttaa 44611507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 4072353 - 4072403
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  4072353 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 4072403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 10117607 - 10117557
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  10117607 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 10117557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 22101256 - 22101206
Alignment:
Q  103 attttctcaaagtttgttatatctaa-ataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| || | || |||||||||||||||||||    
T  22101256 attttctcaaagtttgttatatccaacaaaatatgtatttttagttaagaa 22101206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 25446341 - 25446291
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  25446341 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 25446291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 55340373 - 55340423
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  55340373 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 55340423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 1476635 - 1476680
Alignment:
Q  107 tctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||| |||||| ||  ||||||||||||||||||    
T  1476635 tctcaaagtttgttatctctaaaaaaattgtatttttagttaagaa 1476680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 38125259 - 38125308
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||| ||||||||||||||  ||| || |||||||||||||||||||    
T  38125259 attttcttaaagtttgttatatacaaaaaatatgtatttttagttaagaa 38125308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 42105467 - 42105512
Alignment:
Q  107 tctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||| |||||| ||  ||||||||||||||||||    
T  42105467 tctcaaagtttgttatctctaaaaaaattgtatttttagttaagaa 42105512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 45712983 - 45713032
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||| ||||    
T  45712983 attttatcaaagtttgttatatccaaaaaatatgtatttttagtttagaa 45713032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 13724062 - 13724114
Alignment:
Q  98 tcatgattttctcaaagtttgttatat-ctaaataagatgtatttttagttaa 149  Q
    |||| |||||||||||||||||||||| | ||| || ||||||||||||||||    
T  13724062 tcataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaa 13724114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 39850424 - 39850476
Alignment:
Q  103 attttctca-aagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    ||||||||| |||||||||||||| ||| || || ||||||||||||||||||    
T  39850424 attttctcacaagtttgttatatccaaaaaatatatatttttagttaagaatc 39850476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 43639161 - 43639213
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaatc 154  Q
    |||||||||||||||||||||| | ||| || || ||||||||||||||||||    
T  43639161 attttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaatc 43639213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 34052375 - 34052321
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  34052375 tcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 34052321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 35665692 - 35665742
Alignment:
Q  99 catgattttctcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  35665692 catgattttctcaaagtttgttatatccaaaaaatatgtatttttagttaa 35665742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 30259146 - 30259195
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  30259146 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 30259195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 30594784 - 30594735
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  30594784 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 30594735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 38883312 - 38883263
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  38883312 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 38883263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 48103455 - 48103408
Alignment:
Q  107 tctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    ||||||||||||||||||| ||| || |||||||||||||||||||||    
T  48103455 tctcaaagtttgttatatccaaaaaatatgtatttttagttaagaatc 48103408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 24836111 - 24836062
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||| ||||    
T  24836111 attttctcaaagtttgttatatccaaaaaatatgtatttttagttnagaa 24836062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 25742511 - 25742557
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||    
T  25742511 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaa 25742557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 40358211 - 40358157
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||| ||| || ||| |||||||||||||||    
T  40358211 tcataattttctcaaagtttgttatatcaaaaaaatatgcatttttagttaagaa 40358157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 3953122 - 3953171
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||||| |||||||||||||||| ||| || |||||||||||||||||||    
T  3953122 attttcacaaagtttgttatatccaaaaaatatgtatttttagttaagaa 3953171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 10936550 - 10936599
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  10936550 attttctcaaagtttgttataaccaaaaaatatgtatttttagttaagaa 10936599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 35339358 - 35339407
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || ||||||||||| |||||||    
T  35339358 attttctcaaagtttgttatatccaaaaaatatgtatttttatttaagaa 35339407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 45997588 - 45997637
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||| ||||||| ||| || |||||||||||||||||||    
T  45997588 attttctcaaagtttattatatccaaaaaatatgtatttttagttaagaa 45997637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 20184318 - 20184370
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaatc 154  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  20184318 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaatc 20184370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 37093859 - 37093808
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    ||||||||||||||||||||||| ||| || || |||||||| |||||||||    
T  37093859 attttctcaaagtttgttatatccaaaaaatatatatttttaattaagaatc 37093808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 9285794 - 9285843
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||| ||||||||||||||||| ||| || ||||||||||| |||||||    
T  9285794 attttatcaaagtttgttatatccaaaaaatatgtatttttatttaagaa 9285843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 9289861 - 9289910
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||| ||||||||||||||||| ||| || ||||||||||| |||||||    
T  9289861 attttatcaaagtttgttatatccaaaaaatatgtatttttatttaagaa 9289910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 33749740 - 33749683
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatg-tatttttagttaagaatc 154  Q
    |||| ||||||||||||||| ||||||||||| |  ||| ||||||||||||||||||    
T  33749740 tcataattttctcaaagtttattatatctaaaaataatgatatttttagttaagaatc 33749683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 31231694 - 31231745
Alignment:
Q  103 attttctcaaagtttgttata--tctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||  || ||| || |||||||||||||||||||    
T  31231694 attttctcaaagtttgttatatgtccaaaaaatatgtatttttagttaagaa 31231745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 45925 - 45876
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  45925 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 45876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 29781039 - 29781088
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  29781039 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 29781088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 40891104 - 40891055
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  40891104 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 40891055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 4035843 - 4035785
Alignment:
Q  92 aattcatcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaag 150  Q
    |||||| ||||||||||||||| ||||||||||| ||| || || ||||||||||||||    
T  4035843 aattcaccatgattttctcaaaatttgttatatccaaaaaatatatatttttagttaag 4035785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 38405230 - 38405180
Alignment:
Q  103 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  38405230 attttctcaaagtttgttatatccaaaaaaagatgtatttttagttaagaa 38405180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 38520114 - 38520060
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||    
T  38520114 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 38520060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 38629570 - 38629516
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||| ||||||| ||| || |||||||||||||||||||    
T  38629570 tcataattttctcaaagtttattatatccaaaaaatatgtatttttagttaagaa 38629516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 33100725 - 33100774
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||| ||||||||||||||    
T  33100725 attttctcaaagtttgttatatcaaaaaaatatgtttttttagttaagaa 33100774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 8210414 - 8210363
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    ||||||||||||||||||||||| ||| || || ||| ||||||||||||||    
T  8210414 attttctcaaagtttgttatatccaaaaaatatatatatttagttaagaatc 8210363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 12234563 - 12234508
Alignment:
Q  98 tcatgattttctcaaagttt-gttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||| |||||||| ||| || |||||||||||||||||||    
T  12234563 tcataattttctcaaagttttgttatatccaaaaaatatgtatttttagttaagaa 12234508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 40393814 - 40393763
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    ||||||||||| |||||||||||  || || |||||||||||||||||||||    
T  40393814 attttctcaaaatttgttatatcccaaaaatatgtatttttagttaagaatc 40393763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 4262056 - 4262105
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||  ||| || ||||||||||| |||||||    
T  4262056 attttctcaaagtttgttatattcaaaaaatatgtatttttaattaagaa 4262105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 24211358 - 24211407
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||| ||||||||||||||||| || |||||||| || |||||||    
T  24211358 attttctcatagtttgttatatctaaaaaatatgtatttctatttaagaa 24211407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 37114329 - 37114280
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||| ||||||| ||| || ||||||||||| |||||||    
T  37114329 attttctcaaagtttattatatccaaaaaatatgtatttttaattaagaa 37114280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 13756027 - 13755995
Alignment:
Q  5 taagaaaagaaaatttgtttaagggtataattg 37  Q
    ||||||| |||||||||||||||||||||||||    
T  13756027 taagaaaggaaaatttgtttaagggtataattg 13755995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 14834755 - 14834795
Alignment:
Q  109 tcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    ||||||||||||||||  ||| |||||||||||||||||||    
T  14834755 tcaaagtttgttatatacaaaaaagatgtatttttagttaa 14834795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 885476 - 885427
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  885476 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 885427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 8091153 - 8091104
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  8091153 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 8091104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 11687223 - 11687272
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  11687223 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaa 11687272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 15546723 - 15546674
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  15546723 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 15546674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 29609092 - 29609043
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  29609092 attttctcaaagtttgttatctccaaaaaagatgtatttttagttaagaa 29609043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 3369081 - 3369027
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||  ||| || |||||||||||||||||||    
T  3369081 tcataattttctcaaagtttgttatattcaaaaaatatgtatttttagttaagaa 3369027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 7808700 - 7808654
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||    
T  7808700 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaa 7808654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 21380016 - 21380070
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| |||||||||| |||||||||||| ||| || |||||||||||||||||||    
T  21380016 tcataattttctcaatgtttgttatatccaaaaaatatgtatttttagttaagaa 21380070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 13172653 - 13172702
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || ||||||||||| |||||||    
T  13172653 attttctcaaagtttgttatatccaaaaaatatgtatttttacttaagaa 13172702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 20501797 - 20501748
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||||||| |||||||||||||| ||| || |||||||||||||||||||    
T  20501797 attttctcgaagtttgttatatccaaaaaatatgtatttttagttaagaa 20501748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 31764400 - 31764454
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| |||||||||||||||||| |||| ||| || |||||| ||||||||||||    
T  31764400 tcataattttctcaaagtttgttgtatccaaaaaatatgtatctttagttaagaa 31764454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 14393655 - 14393601
Alignment:
Q  103 attttctcaaagtttgttatatctaaa---taagatgtatttttagttaagaatc 154  Q
    ||||||||||||||||||||||| |||    || |||||||||||||||||||||    
T  14393655 attttctcaaagtttgttatatccaaaaagaaatatgtatttttagttaagaatc 14393601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 72337 - 72397
Alignment:
Q  89 ctaaattcatcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    ||||||||| ||| ||||||||| ||||||||||||| ||| || ||||||||||||||||    
T  72337 ctaaattcaccataattttctcagagtttgttatatccaaaaaatatgtatttttagttaa 72397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 14533 - 14486
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaag 150  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  14533 attttctcaaagtctgttatatccaaataatatgtatttttagttaag 14486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 51159 - 51105
Alignment:
Q  98 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||    
T  51159 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 51105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 7177 - 7126
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaatc 154  Q
    ||||||||||||||||||||||| |||  | || ||||||||||||||||||    
T  7177 attttctcaaagtttgttatatccaaaatatatatatttttagttaagaatc 7126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 48217 - 48171
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaa 149  Q
    ||||||||||||||||||||||| ||| || ||||||||||| ||||    
T  48217 attttctcaaagtttgttatatccaaaaaatatgtatttttaattaa 48171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 3473 - 3522
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||| ||||||||||||||||| ||| || ||||||||||| |||||||    
T  3473 attttatcaaagtttgttatatccaaaaaatatgtatttttatttaagaa 3522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 10206 - 10158
Alignment:
Q  103 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 152  Q
    ||||||||||||||||||||||| ||| || || ||||||||||||||||    
T  10206 attttctcaaagtttgttatatccaaa-aatatatatttttagttaagaa 10158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 3650 - 3686
Alignment:
Q  88 actaaattcatcatgattttctcaaagtttgttatat 124  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  3650 actaaattcatcataattttctcatagtttgttatat 3686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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