View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14782_high_13 (Length: 220)
Name: NF14782_high_13
Description: NF14782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14782_high_13 |
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Alignment Details
Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 34843420 - 34843232
Alignment:
| Q |
13 |
ttatactgaaaagatagattacatcactaaattatcaagtagctggatgaaatttttactaaaaatgtccaatgtacaagcactttgttactcaataaat |
112 |
Q |
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| T |
34843420 |
ttatactgaaaagatagattacatcactaaattatcaagtagctggatgaaatttttactaaaaatgtccaatgtacaagcactttgttactcaataaat |
34843321 |
T |
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| Q |
113 |
aattccactccaataaatttgcaacatttgcatcctataacttgtctcaatccaaaggttctactttggtggatgccaaagatcttgat |
201 |
Q |
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| T |
34843320 |
aattccactccaataaatttgcaacatttgcatcctataacttgtctcaatccaaaggttctactttggtggatgccaaagatcttgat |
34843232 |
T |
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