View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14783_low_13 (Length: 271)
Name: NF14783_low_13
Description: NF14783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14783_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 37216867 - 37216613
Alignment:
| Q |
1 |
ttctacaacgttaaataaagtgttggagttatagggtgggtagctattaagccagctacgagcaccgttattaaaaaggttatgaaatgtactaaggcta |
100 |
Q |
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| T |
37216867 |
ttctacaacgttaaataaagtgttggagttatagggtgagtagctattaagccagctacgagcaccgttattaaaaaggttatgaaatgtactaaggcta |
37216768 |
T |
|
| Q |
101 |
aggggagactagataaataatgggtgggtgaaagcgcagaattttcggtaagaccaggataacaatgttgagaaagaggttagtgttgattagtttactg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37216767 |
gggggagactagataaataatgggtgggtgaaagcgcggaattttcggtaagaccaggataacaatgttgagaaagaggttagtgttgattagtttactg |
37216668 |
T |
|
| Q |
201 |
ggcattttgcgaagagtttggcaaggattctttcatgtcgtttgggacaatgctt |
255 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37216667 |
ggcattttgcaaagagtttggcaaggattctttcatgtcgtttgggacaatgctt |
37216613 |
T |
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