View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14784_high_103 (Length: 229)
Name: NF14784_high_103
Description: NF14784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14784_high_103 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 51382779 - 51382581
Alignment:
| Q |
16 |
aaaggcatgaaaatatttcaaggctgaatctgaaatccaatagtagaaataaatttgaaaagctaatgatacctggtaaagattagtgttagagtaggag |
115 |
Q |
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| T |
51382779 |
aaaggcatgaaaatatttcaaggctgaatctgaaatccaatagtagaaataaatttgaaaagctaatgatacctggtaaagattagtgttagagtaggaa |
51382680 |
T |
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| Q |
116 |
cagaaaatgcacacaaaacatagagttattcatgtttcatcttatatataaatatgtagccatgagacggttccttccaatataattcaccatctattt |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51382679 |
cagaaaatgcacacaaaacatagagttattcatgtttcatcttatatataaatatgtagccatgagacggttccttccaatataattcaccatctattt |
51382581 |
T |
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