View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14784_high_24 (Length: 412)

Name: NF14784_high_24
Description: NF14784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14784_high_24
NF14784_high_24
[»] chr3 (75 HSPs)
chr3 (41-195)||(10615276-10615431)
chr3 (41-197)||(10616672-10616832)
chr3 (50-196)||(46610009-46610156)
chr3 (318-395)||(1139521-1139598)
chr3 (50-199)||(46597418-46597568)
chr3 (52-200)||(28206978-28207123)
chr3 (50-197)||(15086221-15086370)
chr3 (52-199)||(28208057-28208205)
chr3 (60-197)||(37977429-37977564)
chr3 (60-198)||(15093633-15093773)
chr3 (60-198)||(46596093-46596232)
chr3 (50-197)||(22256201-22256350)
chr3 (60-207)||(38843470-38843618)
chr3 (137-194)||(48044276-48044333)
chr3 (50-126)||(48288271-48288348)
chr3 (137-197)||(18142195-18142255)
chr3 (52-111)||(43930712-43930771)
chr3 (137-196)||(54567741-54567800)
chr3 (139-197)||(31835841-31835899)
chr3 (137-193)||(4217679-4217735)
chr3 (137-205)||(12066220-12066288)
chr3 (137-197)||(18140939-18140999)
chr3 (52-111)||(2011872-2011931)
chr3 (137-199)||(24729628-24729691)
chr3 (50-103)||(24528472-24528525)
chr3 (50-111)||(27360497-27360558)
chr3 (137-197)||(7248864-7248924)
chr3 (137-196)||(14824750-14824810)
chr3 (138-205)||(37975960-37976028)
chr3 (137-197)||(38343183-38343243)
chr3 (197-245)||(1139399-1139451)
chr3 (137-195)||(4218864-4218923)
chr3 (137-195)||(27521521-27521580)
chr3 (137-196)||(29184979-29185038)
chr3 (137-196)||(41749386-41749445)
chr3 (164-199)||(49872974-49873009)
chr3 (164-198)||(6510213-6510247)
chr3 (53-111)||(52396360-52396418)
chr3 (147-196)||(29183732-29183781)
chr3 (137-206)||(51252039-51252108)
chr3 (164-197)||(51460788-51460821)
chr3 (137-197)||(11359456-11359516)
chr3 (165-197)||(20957195-20957227)
chr3 (164-196)||(47115587-47115619)
chr3 (137-197)||(49263028-49263088)
chr3 (164-196)||(49880762-49880794)
chr3 (52-111)||(27318167-27318226)
chr3 (137-198)||(27432818-27432881)
chr3 (166-197)||(27497798-27497829)
chr3 (138-197)||(45291419-45291478)
chr3 (139-196)||(22257332-22257390)
chr3 (164-194)||(22949248-22949278)
chr3 (139-197)||(24909379-24909437)
chr3 (137-199)||(34062336-34062398)
chr3 (137-198)||(2305502-2305562)
chr3 (164-193)||(8827450-8827479)
chr3 (164-197)||(14241213-14241246)
chr3 (137-198)||(14826073-14826134)
chr3 (50-197)||(18704952-18705094)
chr3 (164-197)||(25110086-25110119)
chr3 (164-197)||(27760288-27760321)
chr3 (143-200)||(31173589-31173645)
chr3 (138-196)||(38344380-38344442)
chr3 (164-202)||(49872707-49872747)
chr3 (137-197)||(51252282-51252343)
chr3 (164-197)||(53806821-53806854)
chr3 (137-196)||(3548354-3548413)
chr3 (166-198)||(9322117-9322149)
chr3 (137-196)||(11360345-11360405)
chr3 (137-196)||(20956943-20957002)
chr3 (166-198)||(30271804-30271836)
chr3 (138-198)||(33898271-33898331)
chr3 (167-199)||(43929935-43929967)
chr3 (167-199)||(47117336-47117368)
chr3 (165-197)||(51549581-51549613)
[»] chr2 (80 HSPs)
chr2 (41-198)||(1902928-1903087)
chr2 (51-198)||(38937419-38937567)
chr2 (41-200)||(1904309-1904470)
chr2 (38-196)||(44366867-44367027)
chr2 (41-196)||(7576325-7576481)
chr2 (50-196)||(38815003-38815150)
chr2 (50-196)||(38935945-38936091)
chr2 (57-197)||(7577693-7577835)
chr2 (50-197)||(21903922-21904072)
chr2 (53-198)||(38876934-38877080)
chr2 (51-126)||(38937000-38937076)
chr2 (41-195)||(16670500-16670655)
chr2 (52-126)||(38876060-38876135)
chr2 (41-126)||(38813646-38813732)
chr2 (40-197)||(23834580-23834738)
chr2 (52-126)||(11101165-11101239)
chr2 (41-197)||(23835674-23835830)
chr2 (52-205)||(18249622-18249776)
chr2 (50-126)||(44368294-44368371)
chr2 (41-197)||(18250790-18250948)
chr2 (52-126)||(31551976-31552050)
chr2 (48-196)||(5969725-5969878)
chr2 (164-206)||(16577372-16577414)
chr2 (41-111)||(16671704-16671774)
chr2 (143-197)||(19686183-19686237)
chr2 (137-198)||(22468222-22468284)
chr2 (137-198)||(22474443-22474505)
chr2 (137-198)||(30371383-30371444)
chr2 (50-126)||(41305952-41306029)
chr2 (50-196)||(5970666-5970810)
chr2 (52-126)||(11102077-11102152)
chr2 (137-195)||(22466982-22467041)
chr2 (137-200)||(28461064-28461126)
chr2 (164-199)||(34635703-34635738)
chr2 (137-196)||(44242353-44242412)
chr2 (137-195)||(18416671-18416729)
chr2 (164-198)||(19493473-19493507)
chr2 (164-198)||(22116153-22116187)
chr2 (164-197)||(17328091-17328124)
chr2 (137-197)||(28462491-28462552)
chr2 (137-202)||(28484590-28484655)
chr2 (139-200)||(41305877-41305937)
chr2 (137-197)||(15747750-15747810)
chr2 (164-196)||(19641446-19641478)
chr2 (164-196)||(19840039-19840071)
chr2 (164-196)||(29835102-29835134)
chr2 (164-196)||(37147551-37147583)
chr2 (137-197)||(44241096-44241156)
chr2 (166-197)||(3364588-3364619)
chr2 (145-196)||(12028198-12028249)
chr2 (166-205)||(18555834-18555873)
chr2 (166-197)||(19052200-19052231)
chr2 (137-199)||(25227820-25227883)
chr2 (164-199)||(30371621-30371656)
chr2 (52-126)||(36565306-36565381)
chr2 (164-195)||(38210865-38210896)
chr2 (164-195)||(38385936-38385967)
chr2 (139-197)||(15749008-15749066)
chr2 (139-193)||(28141691-28141745)
chr2 (137-198)||(33868473-33868534)
chr2 (165-206)||(35007653-35007695)
chr2 (164-194)||(43301882-43301912)
chr2 (54-126)||(10355078-10355151)
chr2 (164-197)||(22535453-22535486)
chr2 (164-197)||(23260319-23260352)
chr2 (166-195)||(34428638-34428667)
chr2 (166-199)||(38625162-38625195)
chr2 (50-103)||(41307057-41307110)
chr2 (137-178)||(45161379-45161420)
chr2 (166-198)||(3364325-3364357)
chr2 (150-194)||(10355329-10355373)
chr2 (138-194)||(15809374-15809430)
chr2 (138-198)||(20182262-20182321)
chr2 (164-196)||(20182519-20182551)
chr2 (170-202)||(25228058-25228090)
chr2 (164-196)||(28149691-28149723)
chr2 (137-201)||(33441500-33441563)
chr2 (164-196)||(33641132-33641164)
chr2 (150-198)||(38386170-38386218)
chr2 (138-193)||(38875991-38876047)
[»] chr5 (55 HSPs)
chr5 (41-198)||(15061724-15061882)
chr5 (41-197)||(11956138-11956296)
chr5 (41-197)||(15060162-15060320)
chr5 (41-199)||(41064141-41064301)
chr5 (41-198)||(15615101-15615259)
chr5 (41-197)||(41065557-41065715)
chr5 (41-198)||(11957549-11957708)
chr5 (50-197)||(15616409-15616558)
chr5 (52-200)||(30798490-30798639)
chr5 (50-196)||(21776816-21776964)
chr5 (50-196)||(30796579-30796726)
chr5 (41-173)||(21775485-21775618)
chr5 (50-207)||(10012717-10012874)
chr5 (60-199)||(11438336-11438476)
chr5 (41-111)||(29520221-29520291)
chr5 (137-195)||(13948580-13948638)
chr5 (137-195)||(28819537-28819595)
chr5 (41-126)||(29521330-29521416)
chr5 (139-196)||(37274748-37274805)
chr5 (138-197)||(9751675-9751734)
chr5 (137-203)||(889061-889127)
chr5 (138-196)||(12399585-12399643)
chr5 (137-199)||(22551519-22551581)
chr5 (50-111)||(40434562-40434623)
chr5 (50-199)||(11439709-11439857)
chr5 (50-124)||(8367908-8367983)
chr5 (164-207)||(29104433-29104476)
chr5 (164-206)||(2870909-2870951)
chr5 (137-198)||(9750445-9750507)
chr5 (137-195)||(10011619-10011677)
chr5 (164-198)||(10976772-10976806)
chr5 (137-179)||(28820553-28820595)
chr5 (137-199)||(33052814-33052875)
chr5 (50-197)||(40434316-40434463)
chr5 (139-196)||(11890099-11890155)
chr5 (66-126)||(33750988-33751049)
chr5 (164-197)||(38482317-38482350)
chr5 (60-183)||(40434004-40434123)
chr5 (137-197)||(26034844-26034904)
chr5 (137-196)||(35599312-35599372)
chr5 (138-197)||(4060458-4060517)
chr5 (143-197)||(19599969-19600024)
chr5 (137-200)||(24098661-24098724)
chr5 (145-207)||(29520125-29520185)
chr5 (137-195)||(35600536-35600595)
chr5 (138-199)||(15395541-15395600)
chr5 (60-125)||(37274817-37274883)
chr5 (137-183)||(40434486-40434532)
chr5 (141-194)||(5700665-5700718)
chr5 (148-197)||(8368006-8368055)
chr5 (137-197)||(19601264-19601325)
chr5 (164-193)||(20689053-20689082)
chr5 (137-198)||(26888455-26888516)
chr5 (164-197)||(31861490-31861523)
chr5 (164-196)||(36993008-36993040)
[»] chr1 (94 HSPs)
chr1 (41-197)||(14625369-14625526)
chr1 (50-199)||(9442899-9443050)
chr1 (50-197)||(9441566-9441715)
chr1 (38-197)||(14626676-14626837)
chr1 (50-196)||(52084735-52084884)
chr1 (41-207)||(23322510-23322678)
chr1 (60-199)||(43635832-43635970)
chr1 (139-205)||(8928806-8928872)
chr1 (50-126)||(13917181-13917258)
chr1 (50-111)||(52083637-52083697)
chr1 (50-194)||(2273503-2273647)
chr1 (50-197)||(37194400-37194547)
chr1 (41-198)||(23321261-23321420)
chr1 (60-197)||(8930267-8930404)
chr1 (52-126)||(13916161-13916236)
chr1 (137-198)||(26095812-26095873)
chr1 (138-194)||(1825296-1825352)
chr1 (145-197)||(38742387-38742439)
chr1 (52-126)||(5560942-5561017)
chr1 (138-197)||(26097026-26097085)
chr1 (50-111)||(6077026-6077087)
chr1 (50-111)||(27547412-27547473)
chr1 (139-195)||(13902066-13902122)
chr1 (139-199)||(16785719-16785779)
chr1 (139-198)||(32131903-32131962)
chr1 (137-196)||(51470129-51470188)
chr1 (52-199)||(51903390-51903536)
chr1 (138-199)||(1826433-1826495)
chr1 (137-198)||(33667630-33667692)
chr1 (139-196)||(33645014-33645071)
chr1 (137-197)||(24963001-24963061)
chr1 (145-197)||(35979590-35979642)
chr1 (137-200)||(28410910-28410973)
chr1 (52-111)||(37193564-37193623)
chr1 (62-199)||(44311205-44311342)
chr1 (137-195)||(47146366-47146425)
chr1 (41-126)||(2274563-2274649)
chr1 (145-195)||(2472590-2472640)
chr1 (164-198)||(9439427-9439461)
chr1 (147-197)||(13903379-13903429)
chr1 (139-197)||(14978709-14978767)
chr1 (164-198)||(24987606-24987640)
chr1 (137-195)||(31648584-31648642)
chr1 (140-193)||(40247381-40247435)
chr1 (164-197)||(18458827-18458860)
chr1 (164-197)||(25235773-25235806)
chr1 (139-199)||(25600927-25600988)
chr1 (137-198)||(44200325-44200386)
chr1 (164-197)||(47022094-47022127)
chr1 (137-193)||(2059424-2059480)
chr1 (164-196)||(10028002-10028034)
chr1 (150-197)||(50105407-50105455)
chr1 (164-199)||(2472387-2472422)
chr1 (137-196)||(7112494-7112553)
chr1 (166-197)||(13545578-13545609)
chr1 (137-195)||(16786146-16786205)
chr1 (137-196)||(18458567-18458626)
chr1 (164-199)||(22604687-22604722)
chr1 (137-196)||(25601916-25601975)
chr1 (60-126)||(30536437-30536504)
chr1 (137-199)||(32130641-32130704)
chr1 (138-200)||(36343150-36343213)
chr1 (137-196)||(44312128-44312187)
chr1 (146-196)||(52083580-52083631)
chr1 (137-179)||(8984871-8984913)
chr1 (164-194)||(21853418-21853448)
chr1 (166-196)||(30659435-30659465)
chr1 (50-92)||(40373522-40373564)
chr1 (166-200)||(47021833-47021867)
chr1 (138-196)||(49201384-49201442)
chr1 (137-183)||(51809769-51809815)
chr1 (150-199)||(5561744-5561793)
chr1 (166-195)||(7112748-7112777)
chr1 (164-193)||(15336378-15336407)
chr1 (150-199)||(22591277-22591326)
chr1 (137-195)||(27548954-27549014)
chr1 (164-197)||(28724324-28724357)
chr1 (164-197)||(30434279-30434312)
chr1 (137-197)||(33934636-33934697)
chr1 (139-196)||(40246277-40246334)
chr1 (168-197)||(44826340-44826369)
chr1 (137-197)||(4646756-4646816)
chr1 (164-196)||(5348163-5348195)
chr1 (137-197)||(7780219-7780278)
chr1 (165-197)||(16698868-16698900)
chr1 (137-196)||(20132381-20132441)
chr1 (137-197)||(24545456-24545516)
chr1 (137-196)||(31648075-31648135)
chr1 (164-196)||(35034320-35034352)
chr1 (169-201)||(38132695-38132727)
chr1 (164-196)||(42736846-42736878)
chr1 (164-196)||(46136086-46136118)
chr1 (139-197)||(47145145-47145205)
chr1 (164-196)||(50596183-50596215)
[»] chr8 (57 HSPs)
chr8 (41-195)||(27164559-27164714)
chr8 (41-202)||(39809987-39810150)
chr8 (41-197)||(27163115-27163273)
chr8 (50-196)||(39808649-39808795)
chr8 (39-197)||(42350076-42350236)
chr8 (50-196)||(42348961-42349108)
chr8 (52-126)||(28574609-28574684)
chr8 (50-196)||(1600077-1600222)
chr8 (51-198)||(1601164-1601313)
chr8 (41-198)||(1601671-1601827)
chr8 (49-111)||(5704439-5704501)
chr8 (50-126)||(1602808-1602885)
chr8 (138-196)||(2270290-2270348)
chr8 (52-199)||(28561931-28562079)
chr8 (52-199)||(28567429-28567577)
chr8 (137-198)||(39513865-39513926)
chr8 (137-201)||(12330328-12330392)
chr8 (55-199)||(28575027-28575172)
chr8 (137-197)||(40702008-40702068)
chr8 (52-193)||(3252167-3252308)
chr8 (143-200)||(31985007-31985065)
chr8 (137-195)||(34901503-34901561)
chr8 (138-203)||(39515121-39515186)
chr8 (52-104)||(28561527-28561579)
chr8 (52-104)||(28567025-28567077)
chr8 (164-199)||(34985347-34985382)
chr8 (165-199)||(27987552-27987586)
chr8 (165-199)||(28044854-28044888)
chr8 (164-206)||(29309555-29309597)
chr8 (137-196)||(31986226-31986287)
chr8 (164-197)||(14329625-14329658)
chr8 (164-197)||(25277731-25277764)
chr8 (164-196)||(960522-960554)
chr8 (164-208)||(9513816-9513860)
chr8 (164-196)||(27543650-27543682)
chr8 (137-201)||(43945164-43945228)
chr8 (166-197)||(43400670-43400701)
chr8 (137-179)||(9768302-9768344)
chr8 (164-194)||(40652621-40652651)
chr8 (164-197)||(3912505-3912538)
chr8 (137-198)||(5873685-5873745)
chr8 (164-193)||(8388117-8388146)
chr8 (164-197)||(25601972-25602005)
chr8 (164-197)||(27198143-27198176)
chr8 (164-197)||(27987296-27987329)
chr8 (164-197)||(28044598-28044631)
chr8 (138-195)||(28561435-28561491)
chr8 (138-195)||(28566933-28566989)
chr8 (164-197)||(29309799-29309832)
chr8 (137-198)||(31343600-31343661)
chr8 (164-205)||(40411424-40411465)
chr8 (137-196)||(6819195-6819255)
chr8 (137-197)||(25653703-25653763)
chr8 (139-194)||(34902737-34902793)
chr8 (143-199)||(37402481-37402537)
chr8 (137-200)||(39683006-39683070)
chr8 (137-196)||(41565270-41565330)
[»] chr4 (67 HSPs)
chr4 (41-198)||(34739886-34740045)
chr4 (41-197)||(20962193-20962350)
chr4 (41-199)||(34741294-34741454)
chr4 (50-197)||(29248241-29248389)
chr4 (52-196)||(12566850-12566996)
chr4 (41-197)||(29249610-29249768)
chr4 (41-196)||(20963600-20963757)
chr4 (41-197)||(50881324-50881480)
chr4 (52-123)||(46427158-46427230)
chr4 (68-193)||(51752686-51752812)
chr4 (41-197)||(55499249-55499407)
chr4 (139-197)||(54554382-54554440)
chr4 (60-199)||(2438249-2438389)
chr4 (137-207)||(54555349-54555419)
chr4 (52-198)||(50879907-50880053)
chr4 (139-195)||(21994328-21994384)
chr4 (137-196)||(34027192-34027251)
chr4 (66-199)||(40479442-40479576)
chr4 (55-126)||(43537752-43537824)
chr4 (137-197)||(43860911-43860971)
chr4 (41-200)||(55500305-55500467)
chr4 (52-126)||(43537521-43537596)
chr4 (140-197)||(51754201-51754258)
chr4 (137-197)||(54053568-54053629)
chr4 (137-196)||(550673-550732)
chr4 (137-196)||(50138488-50138547)
chr4 (139-194)||(51164020-51164075)
chr4 (164-198)||(11563542-11563576)
chr4 (164-198)||(37273420-37273454)
chr4 (164-197)||(20125443-20125476)
chr4 (137-198)||(20612964-20613025)
chr4 (164-197)||(21780121-21780154)
chr4 (164-197)||(24215766-24215799)
chr4 (137-197)||(51162076-51162137)
chr4 (139-199)||(11862026-11862086)
chr4 (139-199)||(41331766-41331826)
chr4 (148-199)||(11861900-11861951)
chr4 (137-199)||(17289739-17289802)
chr4 (137-196)||(24701199-24701258)
chr4 (164-199)||(35539805-35539840)
chr4 (164-199)||(50727587-50727622)
chr4 (164-199)||(50735601-50735636)
chr4 (137-198)||(5401759-5401821)
chr4 (139-196)||(7272266-7272324)
chr4 (165-199)||(9001441-9001475)
chr4 (137-195)||(9136402-9136460)
chr4 (138-196)||(15694459-15694517)
chr4 (164-194)||(27579516-27579546)
chr4 (139-197)||(48029414-48029471)
chr4 (137-195)||(49630594-49630651)
chr4 (164-197)||(16493517-16493550)
chr4 (139-199)||(17695972-17696033)
chr4 (164-200)||(18454454-18454491)
chr4 (164-200)||(21246472-21246509)
chr4 (164-200)||(21798328-21798365)
chr4 (164-197)||(22272929-22272962)
chr4 (164-197)||(38656080-38656113)
chr4 (150-194)||(12352470-12352514)
chr4 (137-197)||(14183610-14183670)
chr4 (139-198)||(15695178-15695238)
chr4 (164-196)||(21798590-21798622)
chr4 (145-200)||(34025910-34025966)
chr4 (137-201)||(35904850-35904914)
chr4 (50-125)||(37600875-37600951)
chr4 (164-196)||(46094265-46094297)
chr4 (164-200)||(47320982-47321018)
chr4 (164-196)||(51965372-51965404)
[»] chr7 (73 HSPs)
chr7 (50-200)||(17763332-17763484)
chr7 (41-196)||(17764600-17764757)
chr7 (41-205)||(48170162-48170325)
chr7 (52-197)||(34158057-34158203)
chr7 (50-199)||(1830809-1830959)
chr7 (52-197)||(1831892-1832037)
chr7 (41-197)||(9554160-9554318)
chr7 (52-197)||(9553399-9553546)
chr7 (52-108)||(48168915-48168971)
chr7 (50-197)||(11056728-11056880)
chr7 (137-197)||(48168849-48168909)
chr7 (137-197)||(5219034-5219095)
chr7 (137-197)||(1594122-1594182)
chr7 (137-212)||(14554446-14554521)
chr7 (41-126)||(25776406-25776492)
chr7 (143-197)||(33757409-33757463)
chr7 (52-111)||(13772551-13772611)
chr7 (137-197)||(42509036-42509096)
chr7 (137-192)||(8174888-8174943)
chr7 (137-196)||(13279415-13279474)
chr7 (60-111)||(35891093-35891144)
chr7 (137-196)||(42202161-42202219)
chr7 (137-194)||(1589387-1589445)
chr7 (137-179)||(11058168-11058210)
chr7 (164-197)||(6269527-6269560)
chr7 (164-197)||(9915650-9915683)
chr7 (164-197)||(9923562-9923595)
chr7 (164-197)||(19272474-19272507)
chr7 (145-197)||(23161099-23161152)
chr7 (164-197)||(23784583-23784616)
chr7 (137-197)||(24434906-24434967)
chr7 (137-198)||(31186666-31186727)
chr7 (165-198)||(35913310-35913343)
chr7 (164-196)||(23371449-23371481)
chr7 (164-196)||(38193219-38193251)
chr7 (164-196)||(39580191-39580223)
chr7 (137-197)||(48945183-48945243)
chr7 (137-196)||(5909713-5909772)
chr7 (139-178)||(8175970-8176009)
chr7 (164-199)||(10980621-10980656)
chr7 (137-199)||(13286863-13286926)
chr7 (52-111)||(13771647-13771706)
chr7 (164-195)||(13797636-13797667)
chr7 (166-201)||(19979646-19979681)
chr7 (60-126)||(24436305-24436372)
chr7 (60-111)||(47637802-47637853)
chr7 (143-197)||(21237349-21237403)
chr7 (164-198)||(24555926-24555960)
chr7 (164-198)||(24845636-24845670)
chr7 (164-198)||(26050173-26050207)
chr7 (164-198)||(26059532-26059566)
chr7 (164-206)||(39065373-39065415)
chr7 (137-199)||(44569076-44569138)
chr7 (164-206)||(45163903-45163945)
chr7 (148-194)||(48896481-48896527)
chr7 (164-197)||(10688457-10688490)
chr7 (164-197)||(13882602-13882635)
chr7 (166-195)||(21298015-21298044)
chr7 (137-197)||(24555703-24555764)
chr7 (137-197)||(24757989-24758050)
chr7 (164-197)||(26050428-26050461)
chr7 (164-197)||(26059787-26059820)
chr7 (139-196)||(35891010-35891067)
chr7 (164-200)||(44413879-44413916)
chr7 (164-196)||(3307701-3307733)
chr7 (164-196)||(5766638-5766670)
chr7 (164-199)||(14079021-14079057)
chr7 (164-199)||(14389049-14389085)
chr7 (164-199)||(15037430-15037466)
chr7 (137-196)||(19410509-19410569)
chr7 (166-198)||(19979905-19979937)
chr7 (137-196)||(45865649-45865709)
chr7 (164-196)||(48104753-48104785)
[»] chr6 (46 HSPs)
chr6 (41-197)||(24235531-24235689)
chr6 (52-197)||(24234328-24234475)
chr6 (38-196)||(22056482-22056642)
chr6 (41-196)||(22058179-22058336)
chr6 (41-198)||(56013-56171)
chr6 (50-194)||(24914440-24914586)
chr6 (50-197)||(12322713-12322861)
chr6 (39-197)||(12321561-12321721)
chr6 (60-199)||(34762179-34762319)
chr6 (50-111)||(5999796-5999857)
chr6 (51-196)||(54807-54952)
chr6 (137-196)||(14328644-14328703)
chr6 (137-196)||(14421654-14421713)
chr6 (137-207)||(23270207-23270277)
chr6 (145-197)||(3063489-3063541)
chr6 (52-111)||(6000582-6000641)
chr6 (137-195)||(14327370-14327428)
chr6 (137-195)||(14420380-14420438)
chr6 (138-179)||(33485074-33485115)
chr6 (137-196)||(33483696-33483756)
chr6 (150-197)||(22366229-22366276)
chr6 (137-199)||(20754571-20754633)
chr6 (150-196)||(24387772-24387818)
chr6 (164-197)||(29942468-29942501)
chr6 (137-198)||(32614170-32614231)
chr6 (139-199)||(6000672-6000731)
chr6 (164-196)||(10344050-10344082)
chr6 (164-196)||(13114398-13114430)
chr6 (165-197)||(22574056-22574088)
chr6 (150-193)||(12321192-12321235)
chr6 (137-184)||(19412402-19412449)
chr6 (137-196)||(26469007-26469066)
chr6 (138-197)||(31851757-31851816)
chr6 (164-202)||(22573796-22573834)
chr6 (137-198)||(26644689-26644748)
chr6 (137-198)||(26750655-26750714)
chr6 (141-199)||(30409671-30409729)
chr6 (166-207)||(14585336-14585377)
chr6 (164-197)||(24062166-24062199)
chr6 (138-198)||(3120334-3120393)
chr6 (164-196)||(7922317-7922349)
chr6 (137-197)||(10545830-10545890)
chr6 (166-194)||(13114652-13114680)
chr6 (137-198)||(13497954-13498017)
chr6 (164-196)||(13639509-13639541)
chr6 (139-195)||(34715905-34715960)
[»] scaffold0176 (1 HSPs)
scaffold0176 (50-199)||(196-348)
[»] scaffold0804 (1 HSPs)
scaffold0804 (38-197)||(2732-2893)
[»] scaffold0210 (3 HSPs)
scaffold0210 (41-199)||(4704-4864)
scaffold0210 (41-126)||(5793-5879)
scaffold0210 (139-196)||(5895-5953)
[»] scaffold0040 (2 HSPs)
scaffold0040 (60-196)||(64503-64640)
scaffold0040 (60-201)||(65962-66106)
[»] scaffold0250 (2 HSPs)
scaffold0250 (50-197)||(10079-10227)
scaffold0250 (60-198)||(11488-11628)
[»] scaffold0227 (2 HSPs)
scaffold0227 (60-196)||(24857-24995)
scaffold0227 (137-195)||(23685-23744)
[»] scaffold0136 (2 HSPs)
scaffold0136 (137-204)||(35591-35658)
scaffold0136 (139-199)||(636-696)
[»] scaffold0228 (3 HSPs)
scaffold0228 (50-199)||(8079-8230)
scaffold0228 (50-199)||(15661-15812)
scaffold0228 (50-199)||(25613-25764)
[»] scaffold0725 (2 HSPs)
scaffold0725 (137-197)||(3913-3973)
scaffold0725 (138-197)||(4955-5016)
[»] scaffold0246 (2 HSPs)
scaffold0246 (41-198)||(15870-16031)
scaffold0246 (66-199)||(17381-17515)
[»] scaffold0014 (2 HSPs)
scaffold0014 (143-200)||(227365-227423)
scaffold0014 (137-196)||(228584-228645)
[»] scaffold0769 (1 HSPs)
scaffold0769 (164-199)||(4176-4211)
[»] scaffold0289 (1 HSPs)
scaffold0289 (138-197)||(9919-9978)
[»] scaffold0933 (1 HSPs)
scaffold0933 (138-196)||(2717-2775)
[»] scaffold0384 (2 HSPs)
scaffold0384 (164-206)||(4452-4494)
scaffold0384 (164-197)||(4248-4281)
[»] scaffold0450 (2 HSPs)
scaffold0450 (166-199)||(7856-7889)
scaffold0450 (164-200)||(8120-8156)
[»] scaffold0032 (1 HSPs)
scaffold0032 (164-197)||(91049-91082)
[»] scaffold0192 (1 HSPs)
scaffold0192 (137-197)||(14445-14505)
[»] scaffold0142 (1 HSPs)
scaffold0142 (164-196)||(34851-34883)
[»] scaffold0031 (1 HSPs)
scaffold0031 (164-196)||(1827-1859)
[»] scaffold0010 (1 HSPs)
scaffold0010 (164-196)||(26308-26340)
[»] scaffold0809 (1 HSPs)
scaffold0809 (165-195)||(4023-4053)
[»] scaffold0001 (1 HSPs)
scaffold0001 (137-201)||(53520-53584)


Alignment Details
Target: chr3 (Bit Score: 98; Significance: 4e-48; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 10615431 - 10615276
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||           ||    
T  10615431 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatt 10615332  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  10615331 tacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 10615276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 10616672 - 10616832
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct--nnnnnnnnnnt 137  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||            |    
T  10616672 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaattttttttt 10616771  T
Q  138 tttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    |||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  10616772 tttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 10616832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 46610156 - 46610009
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||            ||||||||||    
T  46610156 gccacatcattgattctgctgagtcacagggctcagggagcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacaggggg 46610057  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  46610056 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 46610009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 1139521 - 1139598
Alignment:
Q  318 cacgtgactgatatttagactcttctaaactaaaccaaaggtgttaaaattgtcgataaagttatatattattgcatc 395  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1139521 cacgtgactcatatttatactcttctaaactaaaccaaaggtgttaaaattgtcgataaatttatatattattgcatc 1139598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 46597418 - 46597568
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||| ||| ||||| ||||||||||  ||||| ||||||||||  |||||||||||||||| | |||||||||||||          ||||||||| ||    
T  46597418 gccacctcagagattatgctgagtcaatgggcttagggggcaattgtgaagaatcttcattttacaaggacggaatctaaattgatttttttacaggagg 46597517  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  46597518 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccctaa 46597568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 52 - 200
Target Start/End: Complemental strand, 28207123 - 28206978
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaaaaggacggaatctnnnnnnnnnnttttacagggggcaa 151  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| | |  |||||||||           ||||||||||| ||    
T  28207123 cacatcatatattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttaca--acggaatctaaaaaaaaa--tttacaggggggaa 28207028  T
Q  152 aatcaaaagtaccctatattacagg-gggtaaagacctattaaccctaat 200  Q
    || ||||||| |||||||||||||| |||||||| |||||||||||||||    
T  28207027 aaccaaaagtgccctatattacaggagggtaaagccctattaaccctaat 28206978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 15086370 - 15086221
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||| ||| |||||||||| |||||  ||||| ||||||||||  |||||||||||||||| | |||||||||||||          ||||||||||||    
T  15086370 gccacctcagagattctgctaagtcaatgggcttagggggcaattgtgaagaatcttcattttacaaggacggaatctaaatatttttttttacaggggg 15086271  T
Q  149 caaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccct 197  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  15086270 caaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 15086221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 52 - 199
Target Start/End: Original strand, 28208057 - 28208205
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggca 150  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||||||            |||||||||| |    
T  28208057 cacatcatagattctgctgagtcacaggactcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaaaattacaggggg-a 28208155  T
Q  151 aaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaa 199  Q
    ||| ||||||| |||||||||||| ||||||||||  |||||||||||||    
T  28208156 aaaccaaaagtgccctatattacaggggggtaaagctctattaaccctaa 28208205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 37977429 - 37977564
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaa 158  Q
    ||||||||||||||||  ||||| ||||||||||| |||||| ||||||||| | |||||||||||||          ||||||||||||||||| ||||    
T  37977429 agattctgctgagtcattgggcttagggggcaatcatgaagattcttcattttacaaggacggaatctaattttt---ttttacagggggcaaaaccaaa 37977525  T
Q  159 agtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||  ||||||||||||||||||||||||||||||||||    
T  37977526 agtgtcctatattacagggggtaaagacctattaaccct 37977564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 60 - 198
Target Start/End: Original strand, 15093633 - 15093773
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnt-tttacagggggcaaaatcaa 157  Q
    |||||||| ||||||| |||| ||||||||||||| ||||||||||| |||| | ||||| |||||||            ||||||||||||||||||||    
T  15093633 agattctgttgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggatggaatctaaaaaaaaaaaatttacagggggcaaaatcaa 15093732  T
Q  158 aagtaccctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||||||| |||||||||||  ||||||||||||    
T  15093733 aagtaccctatattatagggggtaaagttctattaacccta 15093773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 46596232 - 46596093
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaa 158  Q
    |||||||||||||||| |||| ||| ||||||||| ||||||||||| |||| | || || |||||||          ||||||| ||| ||||| ||||    
T  46596232 agattctgctgagtcataggggtcatggggcaatcctgaagaatctttattttacaatgatggaatctaagtttttttttttacatgggacaaaaccaaa 46596133  T
Q  159 agtaccctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  46596132 agtaccctatattacagggggtaaagctctattaacccta 46596093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 22256350 - 22256201
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||| |||||||||| |||||  || || |||||| |||| |||||||||||||||| | |||||||||||||          ||||||||||||    
T  22256350 gccacatcaaagattctgctaagtcaatggacttagggggtaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaatagttttacaggggg 22256251  T
Q  149 caaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccct 197  Q
    ||||| |||||||  | |||||||||| ||||||||||| ||||||||||    
T  22256250 caaaaccaaaagtgtcatatattacaggggggtaaagacttattaaccct 22256201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 38843470 - 38843618
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaa 158  Q
    ||||||||||||||||  || || ||||||||||| ||| |||||||||||| | |||||||| ||||          ||||||||||||||||| ||||    
T  38843470 agattctgctgagtcaatggacttagggggcaatcgtgacgaatcttcattttataaggacgggatctaaaattttt-ttttacagggggcaaaaccaaa 38843568  T
Q  159 agtaccctatattacag-ggggtaaagacctattaaccctaatataaata 207  Q
    |||  |||||||||||  ||||||||||||||| ||||||||||||||||    
T  38843569 agtgtcctatattacaaaggggtaaagacctatcaaccctaatataaata 38843618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 48044333 - 48044276
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaac 194  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||    
T  48044333 ttttacagggggcaaaaccaaaagtgccctatatcacagggggtaaagacctattaac 48044276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 48288271 - 48288348
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    |||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||| | |||| |||||||||||||    
T  48288271 gccacatcatagattctgttgagtcacagggctcaggaggcgatcctgaagaatctttattttacaaggacggaatct 48288348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 18142195 - 18142255
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||||||    
T  18142195 ttttacagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccct 18142255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 43930712 - 43930771
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||||||| ||||    
T  43930712 cacatcatagattctgctgagtcacagaactgagggggcaatcttgaagaatctttattt 43930771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 54567741 - 54567800
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||||||||||||||||    
T  54567741 ttttatagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 54567800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 31835841 - 31835899
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||    
T  31835841 ttacagggggcaaaatcaaaagtgtcatatattacagggggtaaagacatattaaccct 31835899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 4217735 - 4217679
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaa 193  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||||    
T  4217735 ttttacagagggcaaaatcaaaagttacctatattacagggggtaaaggcctattaa 4217679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 12066288 - 12066220
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatataaa 205  Q
    |||||| | ||||||||||||||||  |||||||||||||||||||| | ||||||||||||| |||||    
T  12066288 ttttactgagggcaaaatcaaaagtgacctatattacagggggtaaaaaactattaaccctaaaataaa 12066220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 18140999 - 18140939
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||| |||||| |||||||  ||||||||||||||||||||| ||||||||||||    
T  18140999 ttttacagggagcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccct 18140939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 2011872 - 2011931
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    |||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||| ||||    
T  2011872 cacatcatagattctgctgagtcatagggttcaggggacaatcctgaagaatctttattt 2011931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 24729628 - 24729691
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaaccctaa 199  Q
    ||||||||| ||||||| |||||||| ||||||||||||||| |||||| ||||||||||||||    
T  24729628 ttttacaggaggcaaaaccaaaagtaacctatattacaggggagtaaaggcctattaaccctaa 24729691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 24528472 - 24528525
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaat 103  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||| ||||||    
T  24528472 gccacatcagagattctgctgagtcatagggctcaggggacaatcttaaagaat 24528525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 27360558 - 27360497
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    ||||||||||||||| |||||||||| ||||||||||||  |||| ||||||||||| ||||    
T  27360558 gccacatcatagattttgctgagtcatagggctcaggggagaatcctgaagaatctttattt 27360497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 7248924 - 7248864
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||| ||||| |   |||||||||||||||||||| ||||||||||||    
T  7248924 ttttacagggggcaaaaccaaaaatgatctatattacagggggtaaaggcctattaaccct 7248864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 14824810 - 14824750
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||||  ||||||||||    
T  14824810 ttttacagggggcaaaatcaaaagtgacctatattacaggggcgtaaagcactattaaccc 14824750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 37976028 - 37975960
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccctaatataaa 205  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||   ||||||||||| |||||||    
T  37976028 tttatagggggcaaaaccaaaagtaccctatattacaggggggtaaaactctattaacccttatataaa 37975960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 38343243 - 38343183
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||| ||||||||||||||||||  | ||||||||||| ||||||| ||||||||||||    
T  38343243 ttttacggggggcaaaatcaaaagtgacatatattacaggaggtaaaggcctattaaccct 38343183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 1139399 - 1139451
Alignment:
Q  197 taatataaatagatagta----acataacttcaacaaatttttcgaaagaaag 245  Q
    ||||||||||||||||||    |||||||||||||||||||||||||||||||    
T  1139399 taatataaatagatagtaagtaacataacttcaacaaatttttcgaaagaaag 1139451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 4218864 - 4218923
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatatta-cagggggtaaagacctattaacc 195  Q
    ||||||||||||||||| |||||||  ||||||||| |||||||||||| ||||||||||    
T  4218864 ttttacagggggcaaaaccaaaagtgacctatattaccagggggtaaaggcctattaacc 4218923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 27521580 - 27521521
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaacc 195  Q
    |||||||||||| |||| ||||| || ||||||||||| |||||||||||||||||||||    
T  27521580 ttttacaggggggaaaaccaaaaataacctatattacacgggggtaaagacctattaacc 27521521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 29184979 - 29185038
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||| ||||||| |||||||  |||||||||||||| |||||| |||||||||||    
T  29184979 ttttacaggaggcaaaaccaaaagtgacctatattacagggagtaaaggcctattaaccc 29185038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 41749445 - 41749386
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||  ||||||||||||  ||||||||||| ||||||||| |||||||||||    
T  41749445 ttttacaggggagaaaatcaaaagtgacctatattacaaggggtaaaggcctattaaccc 41749386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 49872974 - 49873009
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||||||||||||||||||||||||    
T  49872974 cctatattacagggggtaaagacctattaaccctaa 49873009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 6510247 - 6510213
Alignment:
Q  164 cctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||||||||||||||||||||||||||    
T  6510247 cctatattacagggggtaaagacctattaacccta 6510213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 52396360 - 52396418
Alignment:
Q  53 acatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    |||||| ||||| ||||||||||||||||  | ||||||||||||||||||||| ||||    
T  52396360 acatcaaagattttgctgagtcacagggcataaggggcaatcttgaagaatctttattt 52396418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 29183781 - 29183732
Alignment:
Q  147 ggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||  ||||||||| ||||| |||||||||||||||||    
T  29183781 ggcaaaatcaaaagtgacctatattataggggataaagacctattaaccc 29183732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 51252108 - 51252039
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatataaat 206  Q
    |||||||| ||| |||| || || || |||||||||||||| |||||||||||||||||| |||| ||||    
T  51252108 ttttacagaggggaaaaccagaaataacctatattacagggagtaaagacctattaaccccaataaaaat 51252039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 51460788 - 51460821
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  51460788 cctatattacagggggtaaagacctattaaccct 51460821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 11359516 - 11359456
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||| |||| |||| |||||||  |||||||| |||||||||||| ||||||||||||    
T  11359516 ttttacaagggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaaccct 11359456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 20957195 - 20957227
Alignment:
Q  165 ctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||||||||||||||||||||||    
T  20957195 ctatattacagggggtaaagacctattaaccct 20957227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 47115587 - 47115619
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  47115587 cctatattacagggggtaaagacctattaaccc 47115619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 49263088 - 49263028
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||| ||  ||||||||||||   |||||||| ||||||||||||||||||||||||    
T  49263088 ttttacagtggagaaaatcaaaagtgatctatattatagggggtaaagacctattaaccct 49263028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 49880762 - 49880794
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  49880762 cctatattacagggggtaaagacctattaaccc 49880794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 27318226 - 27318167
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    ||||||||| ||||| ||||||||||||||||| | | ||||| ||||||||||| ||||    
T  27318226 cacatcatatattctactgagtcacagggctcatgagacaatcctgaagaatctttattt 27318167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 27432818 - 27432881
Alignment:
Q  137 ttttacagggggcaaaatcaaaag-taccctatattacaggg-ggtaaagacctattaacccta 198  Q
    |||||||||||| ||||||||||  |  |||||||||||||| |||||||||||||||||||||    
T  27432818 ttttacagggggaaaaatcaaaaaatgacctatattacagggaggtaaagacctattaacccta 27432881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 197
Target Start/End: Complemental strand, 27497829 - 27497798
Alignment:
Q  166 tatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||    
T  27497829 tatattacagggggtaaagacctattaaccct 27497798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 45291478 - 45291419
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||| ||||||||| |||||||  ||||||||||||||||||| | | ||||||||||    
T  45291478 tttacaaggggcaaaaccaaaagtgacctatattacagggggtaagggcatattaaccct 45291419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 22257332 - 22257390
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaaccc 196  Q
    ||||| |||||||||  |||||| ||||||| |||||||| ||||||||||||||||||    
T  22257332 ttacaaggggcaaaacaaaaagtgccctataatacaggggggtaaagacctattaaccc 22257390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 22949278 - 22949248
Alignment:
Q  164 cctatattacagggggtaaagacctattaac 194  Q
    |||||||||||||||||||||||||||||||    
T  22949278 cctatattacagggggtaaagacctattaac 22949248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 24909437 - 24909379
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||| ||||||| ||||| |  ||||||||||||||||||||  ||||||||||||    
T  24909437 ttacaggaggcaaaaccaaaatttacctatattacagggggtaaatgcctattaaccct 24909379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 34062336 - 34062398
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||| |||| |||||||  ||||||||||||||| |||||  | |||||||||||    
T  34062336 ttttacagggggaaaaaccaaaagtgacctatattacaggggataaaggtcaattaaccctaa 34062398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 2305502 - 2305562
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||| |||| |||||||  |||||||| |||||||||||| | |||||||||||    
T  2305502 ttttacaggggg-aaaaccaaaagtgacctatattgcagggggtaaaggcttattaacccta 2305562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 8827450 - 8827479
Alignment:
Q  164 cctatattacagggggtaaagacctattaa 193  Q
    ||||||||||||||||||||||||||||||    
T  8827450 cctatattacagggggtaaagacctattaa 8827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 14241246 - 14241213
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||| ||||||    
T  14241246 cctatattacagggggtaaagacctataaaccct 14241213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 14826073 - 14826134
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||||||||| |||||||  |  |||||||||||||||||   ||||||||||||    
T  14826073 ttttacagggggcaaaaccaaaagtgacaaatattacagggggtaaaacactattaacccta 14826134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 18705094 - 18704952
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    |||||||||||||||||||||||||| ||||       ||||||| ||||||||||| |||| | ||||| |||||||           |||||||||||    
T  18705094 gccacatcatagattctgctgagtcaaaggg-------ggcaatcctgaagaatctttatttgacaaggaaggaatctaaaaaaaaaaatttacaggggg 18705002  T
Q  149 caaaatcaaaagtaccctatattac-agggggtaaagacctattaaccct 197  Q
     |||| ||||||| |||||||||||  ||||||||||  |||||||||||    
T  18705001 gaaaaccaaaagtgccctatattactggggggtaaagctctattaaccct 18704952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 25110086 - 25110119
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||| |||||||||||||||||||    
T  25110086 cctatattacagggtgtaaagacctattaaccct 25110119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 27760321 - 27760288
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||| ||||||||||    
T  27760321 cctatattacagggggtaaagacttattaaccct 27760288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 31173589 - 31173645
Alignment:
Q  143 agggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaat 200  Q
    ||||||||||| |||||||   |||||||||||||| |||||||||||||| ||||||    
T  31173589 agggggcaaaaccaaaagtgatctatattacagggg-taaagacctattaatcctaat 31173645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 38344380 - 38344442
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccc----tatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||||||||||||  ||    ||||||||||||||||||  |||||||||||    
T  38344380 tttacagggggcaaaatcaaaagtgacctatatatattacagggggtaaatgcctattaaccc 38344442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 49872747 - 49872707
Alignment:
Q  164 cctatattacaggggg--taaagacctattaaccctaatat 202  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  49872747 cctatattacagggggggtaaagacctattaaccctaatat 49872707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 51252282 - 51252343
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggggg-taaagacctattaaccct 197  Q
    |||||||||||| |||| || || |  |||||||||||||||| ||||||||||||||||||    
T  51252282 ttttacaggggggaaaaccagaaatgacctatattacagggggataaagacctattaaccct 51252343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 53806821 - 53806854
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||| ||||||||||||||||||||||    
T  53806821 cctatattacaaggggtaaagacctattaaccct 53806854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 3548354 - 3548413
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccc 196  Q
    |||||||||||| |||| | ||| || |||||||||||| |||||||||||||||||||||    
T  3548354 ttttacaggggg-aaaaccgaaaataacctatattacagaggggtaaagacctattaaccc 3548413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 9322149 - 9322117
Alignment:
Q  166 tatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||| ||||||||||||||||||||    
T  9322149 tatattacagggagtaaagacctattaacccta 9322117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 11360345 - 11360405
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccc 196  Q
    |||||||||||| |||| |||||||  |||||||| || |||||||||| |||||||||||    
T  11360345 ttttacaggggggaaaaccaaaagtgacctatattgcaggggggtaaaggcctattaaccc 11360405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 20957002 - 20956943
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaaccc 196  Q
    |||||||||||| |||||||||| |  | ||||||||||||| ||||||||||||||||||    
T  20957002 ttttacaggggg-aaaatcaaaaatgacatatattacaggggtgtaaagacctattaaccc 20956943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 30271804 - 30271836
Alignment:
Q  166 tatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||| |||||||||||||||||||||    
T  30271804 tatattacaggaggtaaagacctattaacccta 30271836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 33898271 - 33898331
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||||| |||| |||| ||||| || |||||||||||||||||||||  | ||||||||||    
T  33898271 tttacaagggggaaaaccaaaaataacctatattacagggggtaaagcaccattaacccta 33898331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 43929967 - 43929935
Alignment:
Q  167 atattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||||||||| ||||||||||||||    
T  43929967 atattacagggggtaaagccctattaaccctaa 43929935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 47117368 - 47117336
Alignment:
Q  167 atattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||| |||||||||||||||||||||    
T  47117368 atattacagggtgtaaagacctattaaccctaa 47117336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 51549581 - 51549613
Alignment:
Q  165 ctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||| ||||||||||||||||||    
T  51549581 ctatattacaggggataaagacctattaaccct 51549613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 4e-48; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 1903087 - 1902928
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          |||    
T  1903087 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattt 1902988  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaacccta 198  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  1902987 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaacccta 1902928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 38937419 - 38937567
Alignment:
Q  51 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggc 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          ||||| |||||||    
T  38937419 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaattttttttttttatagggggc 38937518  T
Q  150 aaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  38937519 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccta 38937567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 41 - 200
Target Start/End: Original strand, 1904309 - 1904470
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||          |||    
T  1904309 catgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaatttttttt 1904408  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaat 200  Q
     ||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  1904409 cacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctaat 1904470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 44367027 - 44366867
Alignment:
Q  38 tgtcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnn 136  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||              
T  44367027 tgtcatgtaggtgccacatcatagattctgctgagtcacagagctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaa 44366928  T
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggg-ggtaaagacctattaaccc 196  Q
     |||||||||||||||| ||||||| ||||||||||||||| | |||||||||||||||||    
T  44366927 atttacagggggcaaaaccaaaagtgccctatattacagggagttaaagacctattaaccc 44366867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 7576481 - 7576325
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||||          |||    
T  7576481 catgtaggtgccacatcatagattctgctgagtcacatggctca-ggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaatattt 7576383  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacaggggg-taaagacctattaaccc 196  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  7576382 tacagggggcaaaaccaaaagtgccctatattacagggggataaagacctattaaccc 7576325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 38815003 - 38815150
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          |||||||| |||    
T  38815003 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct-aaattttttttttacagaggg 38815101  T
Q  149 caaaatcaaaagtaccctatattacagggg-gtaaagacctattaaccc 196  Q
    ||||| ||||||| || ||||||||||||| ||||||||||||||||||    
T  38815102 caaaaccaaaagtgccttatattacaggggagtaaagacctattaaccc 38815150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 38936091 - 38935945
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          |||||||| |||    
T  38936091 gccacatcattgattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttttttttttacagtggg 38935992  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||||||    
T  38935991 caaaaccaaaagtgtcctatattaca-ggggtaaagacctattaaccc 38935945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 7577693 - 7577835
Alignment:
Q  57 catagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggcaaaatc 155  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||||||||||           ||||||||||| |||| |    
T  7577693 catagattctgctgagtcacaaggctcagggggcaatcttgatgaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggggtaaaacc 7577792  T
Q  156 aaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  7577793 aaaagtgccctatattacaggggggtaaagacctattaaccct 7577835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 21904072 - 21903922
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct-nnnnnnnnnnttttacagggg 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||            ||||||||||    
T  21904072 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaaaatttacagggg 21903973  T
Q  148 gcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaaccct 197  Q
    | |||| ||||||| |||||||||||||||| |||||| || |||||||||    
T  21903972 ggaaaaccaaaagtgccctatattacaggggtgtaaagccccattaaccct 21903922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 38876934 - 38877080
Alignment:
Q  53 acatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggcaa 151  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| |||||||||||||           ||||||||  | ||    
T  38876934 acatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaaatttacaggaaggaa 38877033  T
Q  152 aatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    || ||||||| || ||||||||||||||||||| |||||||||||||    
T  38877034 aaccaaaagtgccttatattacagggggtaaagccctattaacccta 38877080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 38937076 - 38937000
Alignment:
Q  51 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  38937076 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 38937000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 16670655 - 16670500
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||| ||||||||||||||||  | ||| ||||||||||| |||||||||||||||| | || ||||||||||            |    
T  16670655 catgtaggtgccacatcaaagattctgctgagtcaatgagcttagggggcaatcgtgaagaatcttcattttacaatgacggaatctaaaaaaaaaaaat 16670556  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  16670555 tacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 16670500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 38876135 - 38876060
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||    
T  38876135 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaaggacggaatct 38876060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 38813732 - 38813646
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||| |||||||||||||    
T  38813732 catgtaggtgccacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatattcattttacaaggacggaatct 38813646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 197
Target Start/End: Complemental strand, 23834738 - 23834580
Alignment:
Q  40 tcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnntt 138  Q
    |||||| || ||||||||| ||||||||||||||||  ||||| ||||| ||||| |||||||||||||||| | |||||||||||||           |    
T  23834738 tcatgtaggtgccacatcaaagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaaaat 23834639  T
Q  139 ttacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccct 197  Q
    | ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  23834638 t-acagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 23834580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 11101239 - 11101165
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaaaaggacggaatct 126  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||||||||||||    
T  11101239 cacatcatagattctgctgagtcacaacgctcagggggcaatcttgaagaatctttattttcaaggacggaatct 11101165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 23835674 - 23835830
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||| |||||| |||||||||  ||||| ||| | | ||| |||||||||||||||| | ||||||||||||           |||    
T  23835674 catgtaggtgccacatcaaagattccgctgagtcaatgggcttaggagacgatcgtgaagaatcttcattttacaaggacggaatc-gattttttttttt 23835772  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  23835773 tacagggggcaaaactaaaagtgccctatattacagggggtaaagacctattaaccct 23835830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 205
Target Start/End: Complemental strand, 18249776 - 18249622
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggca 150  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||| |||| |||||| ||||||           |||||||| | ||    
T  18249776 cacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacagaatctaaaaaaaaaa-tttacaggagaca 18249678  T
Q  151 aaatcaaaagtaccctatattac-agggggtaaagacctattaaccctaatataaa 205  Q
    ||| ||||||| || |||||||| ||||||||||||||||||||||||||| ||||    
T  18249677 aaaccaaaagtgccatatattacaagggggtaaagacctattaaccctaatttaaa 18249622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 44368294 - 44368371
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatt-taaaaggacggaatct 126  Q
    ||||||||| ||||||||||||||||| ||| | ||||||||||| ||||||||||||||| || |||||||||||||    
T  44368294 gccacatcaaagattctgctgagtcactgggtttagggggcaatcgtgaagaatcttcattatacaaggacggaatct 44368371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 18250790 - 18250948
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||| ||||| ||||||||||||||||  ||||| ||||  ||||| |||||||||||||||| | |||||||||||||            |    
T  18250790 catgtaggtgccgcatcaaagattctgctgagtcaatgggcttagggaacaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaat 18250889  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    |||||| ||||||| ||||| | |||||||||||| |||||||||||||||||||||||    
T  18250890 tacaggaggcaaaaccaaaaatgccctatattacaggggggtaaagacctattaaccct 18250948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 31552050 - 31551976
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaaaaggacggaatct 126  Q
    |||||||||||||||||||||||||| |||||||||||||| | |||| ||| ||  |||| |||||||||||||    
T  31552050 cacatcatagattctgctgagtcacaaggctcagggggcaaacatgaaaaattttattttacaaggacggaatct 31551976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 196
Target Start/End: Complemental strand, 5969878 - 5969725
Alignment:
Q  48 gcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct----nnnnnnnnnnttttac 142  Q
    ||||||||| | |||||||||||||||| |||| ||||||| ||||| | ||||||||| | |||| |||||||||||||               |||||    
T  5969878 gcgccacataagagattctgctgagtcataggggtcaggggacaatcattaagaatctttattttacaaggacggaatctaaaaaaaaaaaaaaatttac 5969779  T
Q  143 agggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||| ||||||| |||||||||||||||||||||||| |||||  ||||||||||    
T  5969778 aggaggcaaaaccaaaagtaccctatattacaggggataaagctctattaaccc 5969725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 16577372 - 16577414
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaatataaat 206  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  16577372 cctatattacagggggtaaagacctattaaccctaaaataaat 16577414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 16671704 - 16671774
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    ||||| || ||||||||| ||||||||||||||||  | ||| ||||||||||| ||||||||||||||||    
T  16671704 catgtaggtgccacatcaaagattctgctgagtcaatgagcttagggggcaatcgtgaagaatcttcattt 16671774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 19686183 - 19686237
Alignment:
Q  143 agggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||    
T  19686183 agggggcaaaaccaaaagtgccctatattacagggggtaaagcactattaaccct 19686237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 22468222 - 22468284
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaacccta 198  Q
    ||||||||||||||||| |||||||  ||||||||||| |||||||||| |||||||||||||    
T  22468222 ttttacagggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaacccta 22468284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 22474443 - 22474505
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaacccta 198  Q
    ||||||||||||||||| |||||||  ||||||||||| |||||||||| |||||||||||||    
T  22474443 ttttacagggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaacccta 22474505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 30371444 - 30371383
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||| |||| ||||| |  |||||||||||||| ||||||||||||||||||||    
T  30371444 ttttacaggggggaaaaccaaaaatgacctatattacagggagtaaagacctattaacccta 30371383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 41306029 - 41305952
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||||||| ||||||||||||||||  ||| | ||||||||||| ||||||| ||||| |||| |||||||||||||    
T  41306029 gccacatcagagattctgctgagtcaatgggtttagggggcaatcgtgaagaagcttcattttacaaggacggaatct 41305952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 5970666 - 5970810
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||| ||| ||||||||||||||||  ||||| ||||| ||||| |||||||||||||||| | ||| |||||||||          ||||||||        
T  5970666 gccacctcagagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcattttacaagaacggaatctaaatttctt-ttttacagaaa- 5970763  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  5970764 caaaaccaaaagtaccctatattaca-ggggtaaagacctattaaccc 5970810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 11102077 - 11102152
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||||| ||||| ||||||||||||| ||  | ||| ||||||||||||||||| | ||||||||||||||||||    
T  11102077 cacatcaaagattatgctgagtcacagtgcatatgggacaatcttgaagaatctttattttaaaaggacggaatct 11102152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 22467041 - 22466982
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaacc 195  Q
    ||||||||||| ||||| |||||||  |||||||||||| ||||||||||||||||||||    
T  22467041 ttttacaggggacaaaaccaaaagtgacctatattacaggggggtaaagacctattaacc 22466982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 28461126 - 28461064
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaat 200  Q
    ||||||||||| ||||| |||||| ||| ||||||||||||||||||| | |||||||||||||    
T  28461126 ttttacaggggccaaaaccaaaaggacc-tatattacagggggtaaaggcttattaaccctaat 28461064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 34635738 - 34635703
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||||||||||||||||||||||||    
T  34635738 cctatattacagggggtaaagacctattaaccctaa 34635703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 44242353 - 44242412
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||||| |||||||   |||||||||||| ||||||| |||||||||||    
T  44242353 ttttacagggggcaaaaccaaaagtgatctatattacaggaggtaaaggcctattaaccc 44242412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 18416671 - 18416729
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||| ||||||||||||||| |||| ||||||||| |||||||||| || ||||||||    
T  18416671 ttttatagggggcaaaatcaacagtagcctatattatagggggtaaatacttattaacc 18416729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 19493473 - 19493507
Alignment:
Q  164 cctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||||||||||||||||||||||||||    
T  19493473 cctatattacagggggtaaagacctattaacccta 19493507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 22116187 - 22116153
Alignment:
Q  164 cctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||||||||||||||||||||||||||    
T  22116187 cctatattacagggggtaaagacctattaacccta 22116153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 17328124 - 17328091
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  17328124 cctatattacagggggtaaagacctattaaccct 17328091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 28462491 - 28462552
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggggg-taaagacctattaaccct 197  Q
    |||||||||| |||||| |||||||  |||||||||||||||| ||||| ||||||||||||    
T  28462491 ttttacagggtgcaaaaccaaaagtgacctatattacagggggataaaggcctattaaccct 28462552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 28484590 - 28484655
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatat 202  Q
    |||||||||| | |||| ||||| |  |||||||||||||| ||||||||||||||| ||||||||    
T  28484590 ttttacagggcggaaaaccaaaaatgacctatattacagggagtaaagacctattaatcctaatat 28484655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 41305937 - 41305877
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaat 200  Q
    |||||| ||||| || ||||||  |||||||||||||||| |||||||||||||||||||||    
T  41305937 ttacagagggcagaaccaaaagcgccctatattacagggg-taaagacctattaaccctaat 41305877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 15747810 - 15747750
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||  ||||| |||||||  |||||||||||||||||||||  |||||||||||    
T  15747810 ttttacagggaacaaaaccaaaagtgacctatattacagggggtaaaggtctattaaccct 15747750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 19641478 - 19641446
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  19641478 cctatattacagggggtaaagacctattaaccc 19641446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 19840071 - 19840039
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  19840071 cctatattacagggggtaaagacctattaaccc 19840039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 29835134 - 29835102
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  29835134 cctatattacagggggtaaagacctattaaccc 29835102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 37147583 - 37147551
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  37147583 cctatattacagggggtaaagacctattaaccc 37147551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 44241156 - 44241096
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||| ||||| ||||| |  |||||||||||||| |||||| ||||||||||||    
T  44241156 ttttacaggggacaaaaccaaaaatgacctatattacagggagtaaagtcctattaaccct 44241096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 197
Target Start/End: Original strand, 3364588 - 3364619
Alignment:
Q  166 tatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||    
T  3364588 tatattacagggggtaaagacctattaaccct 3364619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 12028249 - 12028198
Alignment:
Q  145 ggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||| |||||||||| |  |||||||||||||| ||||||||||||||||||    
T  12028249 ggggaaaaatcaaaaatgacctatattacagggtgtaaagacctattaaccc 12028198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 18555834 - 18555873
Alignment:
Q  166 tatattacagggggtaaagacctattaaccctaatataaa 205  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  18555834 tatattacaggggataaagacctattaaccctaaaataaa 18555873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 197
Target Start/End: Original strand, 19052200 - 19052231
Alignment:
Q  166 tatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||    
T  19052200 tatattacagggggtaaagacctattaaccct 19052231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 25227883 - 25227820
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagg-gggtaaagacctattaaccctaa 199  Q
    |||||||||||| |||| || || |  ||||||||||||| |||||||||||||||||||||||    
T  25227883 ttttacaggggggaaaaccagaaatgacctatattacaggagggtaaagacctattaaccctaa 25227820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 30371621 - 30371656
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||||||||||||||||||| ||||    
T  30371621 cctatattacagggggtaaagacctattaactctaa 30371656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 36565381 - 36565306
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||||| ||||||||||||||| || |||  | ||||||||| ||||||||||| | |||| |||||||||||||    
T  36565381 cacatcaaagattctgctgagtcccaaggcatatggggcaatcctgaagaatctttattttacaaggacggaatct 36565306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 195
Target Start/End: Complemental strand, 38210896 - 38210865
Alignment:
Q  164 cctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||||||||||||||||||||    
T  38210896 cctatattacagggggtaaagacctattaacc 38210865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 195
Target Start/End: Complemental strand, 38385967 - 38385936
Alignment:
Q  164 cctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||||||||||||||||||||    
T  38385967 cctatattacagggggtaaagacctattaacc 38385936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 15749008 - 15749066
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||| |||||||  | ||||||||||||| ||||  ||||||||||||    
T  15749008 ttacagggggcaaaaccaaaagtgacatatattacaggggataaaagcctattaaccct 15749066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 28141745 - 28141691
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaa 193  Q
    |||||||| | |||| |||||||  |||||||||||||||||||||| |||||||    
T  28141745 ttacagggtgtaaaaccaaaagtgacctatattacagggggtaaagatctattaa 28141691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 33868534 - 33868473
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggggg-taaagacctattaacccta 198  Q
    |||||||||||| ||||| ||||||  ||||||||||||| || |||||||||||||||||||    
T  33868534 ttttacaggggg-aaaattaaaagtgacctatattacaggaggataaagacctattaacccta 33868473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 35007695 - 35007653
Alignment:
Q  165 ctatattacagggggt-aaagacctattaaccctaatataaat 206  Q
    |||||||||||||||| ||||||||||||| ||||||||||||    
T  35007695 ctatattacagggggttaaagacctattaatcctaatataaat 35007653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 43301912 - 43301882
Alignment:
Q  164 cctatattacagggggtaaagacctattaac 194  Q
    |||||||||||||||||||||||||||||||    
T  43301912 cctatattacagggggtaaagacctattaac 43301882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 10355151 - 10355078
Alignment:
Q  54 catcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt-aaaaggacggaatct 126  Q
    ||||||| |||||||||| ||||| || | ||||| ||||| ||||||||||| |||| | |||||||||||||    
T  10355151 catcataaattctgctgaatcacatggtttaggggacaatcctgaagaatctttatttgacaaggacggaatct 10355078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 22535486 - 22535453
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||| ||||||||||||||||||||||||    
T  22535486 cctatattaaagggggtaaagacctattaaccct 22535453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 23260352 - 23260319
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||| |||||||||||||||||||    
T  23260352 cctatattacagggagtaaagacctattaaccct 23260319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 34428667 - 34428638
Alignment:
Q  166 tatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||||||||||||||||||    
T  34428667 tatattacagggggtaaagacctattaacc 34428638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 38625162 - 38625195
Alignment:
Q  166 tatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||||||||||| |||||||||||||    
T  38625162 tatattacagggggtaaagatctattaaccctaa 38625195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 41307057 - 41307110
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaat 103  Q
    ||||| ||| ||||||||||||  || ||||||| |||||||||||||||||||    
T  41307057 gccacgtcagagattctgctgacccaaagggctcggggggcaatcttgaagaat 41307110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 45161379 - 45161420
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggg 178  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||    
T  45161379 ttttacaggaggcaaaaccaaaagtgccctatattacagggg 45161420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 3364357 - 3364325
Alignment:
Q  166 tatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||||| |||||||||||||||||||    
T  3364357 tatattacaggggataaagacctattaacccta 3364325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 10355329 - 10355373
Alignment:
Q  150 aaaatcaaaagtaccctatattacagggggtaaagacctattaac 194  Q
    |||||||||||||| ||||| |||||||||||||||  |||||||    
T  10355329 aaaatcaaaagtactctatactacagggggtaaagatttattaac 10355373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 15809374 - 15809430
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaac 194  Q
    ||||||||||  |||| |||||||  |||||||| |||||| |||||||||||||||    
T  15809374 tttacaggggtgaaaaccaaaagtgacctatattgcaggggataaagacctattaac 15809430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 20182321 - 20182262
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||| |||||| ||| |  ||||||||||||||| |||| ||||||||||||||    
T  20182321 tttacaggggg-aaaatcgaaaatgacctatattacaggggataaaaacctattaacccta 20182262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 20182519 - 20182551
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||| ||||||||||||||||||||||    
T  20182519 cctatattacggggggtaaagacctattaaccc 20182551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 25228058 - 25228090
Alignment:
Q  170 ttacagggggtaaagacctattaaccctaatat 202  Q
    ||||||||||||||||||||||||||| |||||    
T  25228058 ttacagggggtaaagacctattaacccgaatat 25228090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 28149691 - 28149723
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||| ||||||||||||    
T  28149691 cctatattacagggggtaaaaacctattaaccc 28149723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 33441563 - 33441500
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaata 201  Q
    |||||||||||| |||  ||||| || |||||||||||||||||||||  | |||||||||||||    
T  33441563 ttttacaggggggaaac-caaaaataacctatattacagggggtaaagcaccattaaccctaata 33441500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 33641164 - 33641132
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||| ||||||||||||||||||||    
T  33641164 cctatattacagagggtaaagacctattaaccc 33641132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 38386170 - 38386218
Alignment:
Q  150 aaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||| ||||| || ||||||||||||||| ||||||| |||||||||||    
T  38386170 aaaaccaaaaataacctatattacaggggataaagacatattaacccta 38386218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 38876047 - 38875991
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaa 193  Q
    ||||||||||| |||| |||||||  |||||||||||| ||||||||| ||||||||    
T  38876047 tttacagggggaaaaaccaaaagtgtcctatattacaggggggtaaagccctattaa 38875991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 41 - 198
Target Start/End: Original strand, 15061724 - 15061882
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||          |||    
T  15061724 catgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttatttttt 15061823  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  15061824 tacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccta 15061882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 11956296 - 11956138
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          |||    
T  11956296 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattt 11956197  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    |||||||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  11956196 tacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 11956138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 15060320 - 15060162
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          |||    
T  15060320 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaatttt 15060221  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    |||||||||||||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  15060220 tacagggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 15060162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 41 - 199
Target Start/End: Complemental strand, 41064301 - 41064141
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||          |||    
T  41064301 catgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattt 41064202  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaa 199  Q
    |||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  41064201 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctaa 41064141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 15615259 - 15615101
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttc-atttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||          |||    
T  15615259 catgtaggtgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcaatttacaaggacggaatctaaaaaaaaaattt 15615160  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    ||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  15615159 taccggggacaaaaccaaaagtgccctatattacagggggtaaagacctattaacccta 15615101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 41065557 - 41065715
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||          |||    
T  41065557 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggaaggaatctaaaaaaaaaattt 41065656  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    |||||||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  41065657 tacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 41065715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 41 - 198
Target Start/End: Original strand, 11957549 - 11957708
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||          |||    
T  11957549 catgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcgtcattttacaaggacggaatctaaaaaaaaaattt 11957648  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaacccta 198  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  11957649 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaacccta 11957708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 15616409 - 15616558
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          ||||||||||||    
T  15616409 gccagatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttttttttttacaggggg 15616508  T
Q  149 caaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  15616509 caaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 15616558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 52 - 200
Target Start/End: Original strand, 30798490 - 30798639
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggca 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||            ||||||||||||    
T  30798490 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacagggggca 30798589  T
Q  151 aaatcaaaagtaccctatattacagggggtaaagacctattaaccctaat 200  Q
    ||||||| ||| ||||||||||  ||||||||||||||||||||||||||    
T  30798590 aaatcaatagtgccctatattaaggggggtaaagacctattaaccctaat 30798639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 21776816 - 21776964
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||           |||||||||||    
T  21776816 gccacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacaggggg 21776915  T
Q  149 caaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccc 196  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  21776916 caaaaccaaaagtgccctatattacagaggggtaaagacctattaaccc 21776964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 30796726 - 30796579
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||           |||||| ||||    
T  30796726 gccacatcatagattctgctgagtcacagggctcagggtgcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacaagggg 30796627  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  30796626 caaaaccaaaagtgccctatattatagggggtaaagacctattaaccc 30796579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 41 - 173
Target Start/End: Complemental strand, 21775618 - 21775485
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||||||          |||    
T  21775618 catgtaggtgccacatcatagattctgctgagtcatagggttcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaattttttttt 21775519  T
Q  140 tacagggggcaaaatcaaaagtaccctatattac 173  Q
    |||| ||||||||| ||||||| |||||||||||    
T  21775518 tacaaggggcaaaaccaaaagtgccctatattac 21775485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 10012717 - 10012874
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||| |||| ||||||| |||||          | ||| |||||     
T  10012717 gccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacgaaatct-aaaaaaaaatattatagggga 10012815  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatataaata 207  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||| || |||||||    
T  10012816 caaaaccaaaagtaccctatattacagaggataaagacctattaacccaaaaataaata 10012874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 11438476 - 11438336
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaaaa-ggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaa 158  Q
    |||||||||||||||| |||| ||||||| ||||| ||||||||||| |||| | | |||||||||||           ||||||||| |||||| ||||    
T  11438476 agattctgctgagtcataggggtcaggggacaatcctgaagaatctttattttacatggacggaatctaaaaaaaaaaatttacagggagcaaaaccaaa 11438377  T
Q  159 agtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  11438376 agtaccctatattacagggggtaaagctctattaaccctaa 11438336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 29520291 - 29520221
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    ||||| || ||||||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||    
T  29520291 catgtaggtgccacatcatagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattt 29520221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 13948580 - 13948638
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| ||||||||||    
T  13948580 ttttacagggggcaaaaccaaaagtgccctatattacaggaggtaaaggcctattaacc 13948638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 28819595 - 28819537
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||||    
T  28819595 ttttacagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaacc 28819537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 29521330 - 29521416
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||| || ||||||||| ||||||||||||||||  ||||| ||| ||||||| ||||||||||||| |||| |||||||||||||    
T  29521330 catgtaggtgccacatcaaagattctgctgagtcattgggcttaggaggcaatcgtgaagaatcttcattttacaaggacggaatct 29521416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 37274805 - 37274748
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||  ||||||||||    
T  37274805 ttacagggggcaaaaccaaaagtaccctatattatagggggtaaagctctattaaccc 37274748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 9751675 - 9751734
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||  ||||||||||||    
T  9751675 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaaagcctattaaccct 9751734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 889127 - 889061
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatata 203  Q
    ||||||||| || |||| |||| ||  ||||||||||| ||||||||||||||||||||||||||||    
T  889127 ttttacaggagggaaaaccaaatgtggcctatattacaaggggtaaagacctattaaccctaatata 889061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 12399585 - 12399643
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||| |||| | ||| || |||||||||||||||||||||||||||||||||    
T  12399585 tttacaggggggaaaaccgaaaataacctatattacagggggtaaagacctattaaccc 12399643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 22551581 - 22551519
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||| || ||||| |||| |  ||||||||||||||||||||||||||||||||||||    
T  22551581 ttttacaggaggaaaaataaaaaatgacctatattacagggggtaaagacctattaaccctaa 22551519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 40434623 - 40434562
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    ||||||||| ||||||||||||||||  ||||| ||||| ||||| ||||||||||||||||    
T  40434623 gccacatcagagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcattt 40434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 11439709 - 11439857
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||| ||| ||||||||||||||||  ||||| || |||||||  |||||||||||||||| | ||||||||||| |          ||||| |||||     
T  11439709 gccacctcagagattctgctgagtcaatgggcttagtgggcaattgtgaagaatcttcattttacaaggacggaat-ttaatttttttttttatagggg- 11439806  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||| ||||||| | |||||||||||| | ||||||||||||||||||||    
T  11439807 caaaaccaaaagtgctctatattacaggagataaagacctattaaccctaa 11439857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 8367908 - 8367983
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaat 124  Q
    ||||||||| ||||||||||| ||||  | ||| ||||||||||| ||||||||||||| |||| |||||||||||    
T  8367908 gccacatcaaagattctgctgcgtcaatgagcttagggggcaatcgtgaagaatcttcattttacaaggacggaat 8367983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 29104476 - 29104433
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaatataaata 207  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    
T  29104476 cctatattacagggggtaaagacctattaacccttatattaata 29104433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 2870909 - 2870951
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaatataaat 206  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  2870909 cctatattacaggaggtaaagacctattaacccaaatataaat 2870951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 9750507 - 9750445
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattac-agggggtaaagacctattaacccta 198  Q
    ||||||||||| ||||| |||||||  |||||||||| ||||||||||| |||||||||||||    
T  9750507 ttttacaggggacaaaaccaaaagtgacctatattacaagggggtaaaggcctattaacccta 9750445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 10011677 - 10011619
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||| ||||||||||| |||||||  ||||||||||| ||| ||||||||||||||||    
T  10011677 ttttagagggggcaaaaccaaaagtgtcctatattacacgggataaagacctattaacc 10011619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 10976772 - 10976806
Alignment:
Q  164 cctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||||||||||||||||||||||||||    
T  10976772 cctatattacagggggtaaagacctattaacccta 10976806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 28820553 - 28820595
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggggg 179  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  28820553 ttttacagggggcaaaatcaaaagtgacctatattacaggggg 28820595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 33052875 - 33052814
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||| ||||| |||| |  ||||||||||| ||||||||||||||||||||||||    
T  33052875 ttttacaggggg-aaaataaaaaatgacctatattacaaggggtaaagacctattaaccctaa 33052814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 40434316 - 40434463
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||  |||||||| |||| |||| |||||||||||||          | ||||| || |    
T  40434316 gccacatcaaagattctgctgagtcaatgggcttagggggcaattgtgaagaat-ttcattttacaaggacggaatctaaaaaaaaaatattacatggag 40434414  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||| |||||||| | |||||||||| |||||||   |||||||||||    
T  40434415 caaaaccaaaagtatcttatattacagagggtaaatgtctattaaccct 40434463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 11890099 - 11890155
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||| |||||||  ||||||||||| ||||||||| |||||||||||    
T  11890099 ttacagggggcaaaaccaaaagtgacctatattaca-ggggtaaaggcctattaaccc 11890155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 33751049 - 33750988
Alignment:
Q  66 tgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    |||||||||| |||| ||||||||||||| ||||||||||| | |||| |||||||||||||    
T  33751049 tgctgagtcatagggatcagggggcaatcctgaagaatctttattttacaaggacggaatct 33750988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 38482350 - 38482317
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  38482350 cctatattacagggggtaaagacctattaaccct 38482317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 183
Target Start/End: Complemental strand, 40434123 - 40434004
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaa 158  Q
    |||||||||||| ||| || |||| |||||||||| ||||||||||| |||| | |||||||||||||          ||||||||||| ||||||||||    
T  40434123 agattctgctgactcaaagagctc-gggggcaatcctgaagaatctttattttacaaggacggaatctaattttt---ttttacagggg-caaaatcaaa 40434029  T
Q  159 agtaccctatattacagggggtaaa 183  Q
    ||| |||||||||||||| ||||||    
T  40434028 agtgccctatattacaggaggtaaa 40434004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 26034904 - 26034844
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||| |||| ||||| |  |||||||| ||| |||||||||||||||||||||    
T  26034904 ttttacagggggaaaaaccaaaaatgacctatattgcagagggtaaagacctattaaccct 26034844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 35599372 - 35599312
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccc 196  Q
    ||||||||||||||||| |||||||  |||||||||||| |||||||||  ||||||||||    
T  35599372 ttttacagggggcaaaaccaaaagtgacctatattacaggggggtaaaggtctattaaccc 35599312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 4060517 - 4060458
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||| ||||||||| ||| ||||| |||||||| |||||||||||  |||||||||||    
T  4060517 tttacaaggggcaaaaccaagagtactctatattagagggggtaaagctctattaaccct 4060458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 19600024 - 19599969
Alignment:
Q  143 agggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccct 197  Q
    ||||||||||| |||||||  |||||||||||| ||||||||| ||||||||||||    
T  19600024 agggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccct 19599969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 24098661 - 24098724
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaat 200  Q
    ||||||||| || |||| ||||| |  ||||||||||| ||| |||||||||||||||||||||    
T  24098661 ttttacaggagggaaaaccaaaaatgacctatattacaagggctaaagacctattaaccctaat 24098724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 29520185 - 29520125
Alignment:
Q  145 ggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatataaata 207  Q
    ||||||||| ||||||||||||||||||||  || |||||| |||||||||| |||| |||||    
T  29520185 ggggcaaaaccaaaagtaccctatattaca--ggataaagatctattaacccaaataaaaata 29520125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 35600536 - 35600595
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaacc 195  Q
    ||||||| ||||||||| |||||||  ||||||||||| |||||||||| ||||||||||    
T  35600536 ttttacaaggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaacc 35600595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 15395600 - 15395541
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||  ||| |||||||  ||||| |||||||||||||| |||||||||||||||    
T  15395600 tttacaggggg--aaaccaaaagtgacctattttacagggggtaaaaacctattaaccctaa 15395541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 37274883 - 37274817
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatc 125  Q
    |||||||||||||||| |||  | ||||||||||| ||||||||||| | |||| ||||||||||||    
T  37274883 agattctgctgagtcataggagttagggggcaatcctgaagaatctttattttacaaggacggaatc 37274817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 40434532 - 40434486
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaa 183  Q
    |||||||| |||||||||||||||| || |||| |||||||||||||    
T  40434532 ttttacagagggcaaaatcaaaagtgccatataatacagggggtaaa 40434486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 5700665 - 5700718
Alignment:
Q  141 acagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaac 194  Q
    |||||||| ||||||||||||  |||||||| ||||||||||||  ||||||||    
T  5700665 acaggggggaaaatcaaaagtgacctatattgcagggggtaaaggtctattaac 5700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 8368006 - 8368055
Alignment:
Q  148 gcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||| ||||||| | ||||| ||||| |||||||||||||||||||||    
T  8368006 gcaaaaccaaaagtgctctatactacagagggtaaagacctattaaccct 8368055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 19601264 - 19601325
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    |||||||||  |||||| |||||||  ||||||||||| |||||||||| ||||||||||||    
T  19601264 ttttacaggatgcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccct 19601325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 20689053 - 20689082
Alignment:
Q  164 cctatattacagggggtaaagacctattaa 193  Q
    ||||||||||||||||||||||||||||||    
T  20689053 cctatattacagggggtaaagacctattaa 20689082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 26888455 - 26888516
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||||||||| |||||||  ||||||||| || |||||||   ||||||||||||    
T  26888455 ttttacagggggcaaaaccaaaagtgacctatattatagagggtaaaacactattaacccta 26888516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 31861523 - 31861490
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||| ||||||||||||||||||    
T  31861523 cctatattacaggggataaagacctattaaccct 31861490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 36993008 - 36993040
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||| ||||||||||||||||||||    
T  36993008 cctatattacagagggtaaagacctattaaccc 36993040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 6e-47; HSPs: 94)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 14625526 - 14625369
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||          |||    
T  14625526 catgtaggcgccacatcatagattctgctgagtcacagggctcagagggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattt 14625427  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  14625426 tacagggggcaaaaccaaaagtgtcctatattacagggggtaaagacctattaaccct 14625369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 9442899 - 9443050
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          ||||||| ||||    
T  9442899 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaattttttttacaagggg 9442998  T
Q  149 caaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaa 199  Q
    ||||| ||||||| | |||||||||| |||||||||||||||||||||||||    
T  9442999 caaaaccaaaagtgctctatattacaggggggtaaagacctattaaccctaa 9443050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 9441715 - 9441566
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          ||||||||||||    
T  9441715 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaattttttacaggggg 9441616  T
Q  149 caaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    ||||| |||||||  | ||||||||| |||||||||||||||||||||||    
T  9441615 caaaaccaaaagtgtcttatattacaggggggtaaagacctattaaccct 9441566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 14626676 - 14626837
Alignment:
Q  38 tgtcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnn 136  Q
    |||||||| || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||              
T  14626676 tgtcatgtaggtgccatatcatagattctgctgagtcacggggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaa 14626775  T
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaaccct 197  Q
     |||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||||    
T  14626776 atttacaggaggcaaaaccaaaagtgccctatattacaggggagtaaagacctattaaccct 14626837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 52084735 - 52084884
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||          |||||||||||     
T  52084735 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaattttacagggga 52084834  T
Q  149 caaaatcaaaagtaccctatattaca--gggggtaaagacctattaaccc 196  Q
    ||||| ||||||| | ||||||||||  ||||||||||||||||||||||    
T  52084835 caaaaccaaaagtgctctatattacagggggggtaaagacctattaaccc 52084884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 41 - 207
Target Start/End: Original strand, 23322510 - 23322678
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||| ||||||||||||||||  ||||| || |||||||| |||||||||||||||| | |||||||||||||            |    
T  23322510 catgtaggtgccacatcaaagattctgctgagtcaatgggcttagagggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaataat 23322609  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaaccctaatataaata 207  Q
    |||||||||||||| ||||||| | |||||||||||||| |||||||||||||||||||||||||||||    
T  23322610 tacagggggcaaaaccaaaagtgctctatattacaggggggtaaagacctattaaccctaatataaata 23322678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 43635970 - 43635832
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaa 158  Q
    ||||||||||||||||  ||||| ||||| ||||| |||||||||||||||| | ||||||| |||||          ||||| ||||||||||| ||||    
T  43635970 agattctgctgagtcaatgggcttaggggtcaatcgtgaagaatcttcattttacaaggacgaaatctaatttttt--ttttaaagggggcaaaaccaaa 43635873  T
Q  159 agtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  43635872 agtgccctatattacagggggtaaagacctattaaccctaa 43635832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 8928872 - 8928806
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatataaa 205  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||    
T  8928872 ttacagggggcaaaatcaaaagtgccttatattacagggggtaaagacctattaaccctaaaataaa 8928806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 13917181 - 13917258
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  13917181 gccacatcatggattctgctgagtcacagggctcaggaggcaatcttgaagaatctttattttacaaggacggaatct 13917258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 52083697 - 52083637
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  52083697 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaa-aatcttcattt 52083637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 2273647 - 2273503
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||| ||||||||||||||||  ||||| |||| |||||| ||||||||||||| |||| |||||||||||||           ||||||| |||    
T  2273647 gccacatcaaagattctgctgagtcaatgggcttagggagcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagaggg 2273548  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaac 194  Q
    | |||  |||||| ||||||||||||||||||||||||||||||||    
T  2273547 c-aaacaaaaagtgccctatattacagggggtaaagacctattaac 2273503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 37194400 - 37194547
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| | |||| |||||||||||||           |||| ||||||    
T  37194400 gccacatcatagattctgctgagtcacggggctca-ggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaaatttagaggggg 37194498  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
     |||| ||||| |  |||||||||||||| ||||||  |||||||||||    
T  37194499 aaaaaccaaaaatgtcctatattacagggagtaaagttctattaaccct 37194547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 23321420 - 23321261
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||| | ||||||||| ||||||  ||||| | ||||||||| |||||||||||||||| | |||||||||||||          |||    
T  23321420 catgtaggtgccacattaaagattctgcagagtcaatgggcttaaggggcaatcgtgaagaatcttcattttacaaggacggaatctaattttttttttt 23321321  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagg-gggtaaagacctattaacccta 198  Q
    |||| ||||||||| ||||||| |||||||||||||| || |||||| ||||||||||||    
T  23321320 tacatggggcaaaaccaaaagtgccctatattacaggaggataaagatctattaacccta 23321261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 8930267 - 8930404
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaa 158  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| |||| | ||||||| |||||          ||||||||||| ||||| ||||    
T  8930267 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggacgaaatctaattttttt-ttttacaggggacaaaaccaaa 8930365  T
Q  159 agtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||| ||||||||||||||||||   |||||||||||    
T  8930366 agtaccttatattacagggggtaaaactctattaaccct 8930404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 13916236 - 13916161
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| | |||| |||||||||||||    
T  13916236 cacatcatagattgtgctgagtcacagcgctcagtgggcaatcttgaagaatctttattttacaaggacggaatct 13916161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 26095873 - 26095812
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||||||||| || ||||  |||||||||||||||||||||||||||||||||||    
T  26095873 ttttacagggggcaaaaccataagtgacctatattacagggggtaaagacctattaacccta 26095812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 1825352 - 1825296
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaac 194  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  1825352 tttacagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaac 1825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 38742387 - 38742439
Alignment:
Q  145 ggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  38742387 ggggcaaaatcaaaagtaccctatattacagggggtaaagctctattaaccct 38742439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 5561017 - 5560942
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||| | |||| |||||||||||||    
T  5561017 cacatcaaagattctgctgagtcacagagcatagggggcaatcttgaagaatctttattttacaaggacggaatct 5560942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 26097026 - 26097085
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||| ||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  26097026 tttacaggaggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccct 26097085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 6077087 - 6077026
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||    
T  6077087 gccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattt 6077026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 27547473 - 27547412
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||    
T  27547473 gccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattt 27547412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 13902122 - 13902066
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||| ||||| | |||||||||||||| ||||||||||||||||||    
T  13902122 ttacagggggcaaaaccaaaactgccctatattacaggtggtaaagacctattaacc 13902066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 16785779 - 16785719
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||||    
T  16785779 ttacagggggcaaaaccaaaagtgacctacattacagggggtaaaggcctattaaccctaa 16785719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 32131903 - 32131962
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    ||||| ||||||||| | |||||  |||||||||||||||||||||||||||||||||||    
T  32131903 ttacaaggggcaaaaccgaaagtgacctatattacagggggtaaagacctattaacccta 32131962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 51470188 - 51470129
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||||||| |||||||| |||||||  | |||||||||||||||||||||||||||||||    
T  51470188 ttttacagagggcaaaaccaaaagtgacttatattacagggggtaaagacctattaaccc 51470129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 199
Target Start/End: Original strand, 51903390 - 51903536
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggca 150  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||| |||||||| |||| |||| ||||||| ||| |          ||||||| ||||||    
T  51903390 cacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatattcattttacaaggacgaaatttattttattttttttacatggggca 51903489  T
Q  151 aaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||| ||||||| |||||||||||| |||  |||| || |||||||||||    
T  51903490 aaaccaaaagtgccctatattacaaggg--aaaggcccattaaccctaa 51903536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 1826433 - 1826495
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||| || ||||||||||||    
T  1826433 tttacagggggcaaaatcaaaagtgacctatattacaggggggtaaaaacatattaaccctaa 1826495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 33667630 - 33667692
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaacccta 198  Q
    ||||||||||||||||| |||||||  ||||||||||||||| |||||| |||||||||||||    
T  33667630 ttttacagggggcaaaaccaaaagtgacctatattacaggggtgtaaaggcctattaacccta 33667692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 33645071 - 33645014
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||| ||| ||||||    
T  33645071 ttacaaggggcaaaatcaaaagtgacctatattacagggggtaaagatctaataaccc 33645014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 24963001 - 24963061
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||| | |||||||||| || ||||||||||||||||||||  ||||||||||||    
T  24963001 ttttacagggaggaaaatcaaaaataacctatattacagggggtaaaagcctattaaccct 24963061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 35979590 - 35979642
Alignment:
Q  145 ggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||||||  | |||||||||||||| |||||||||||||||||    
T  35979590 ggggcaaaatcaaaagtgacttatattacagggggaaaagacctattaaccct 35979642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 28410973 - 28410910
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaat 200  Q
    |||||||| ||| |||||| ||| |  ||||||||||||||| |||||||||||||||||||||    
T  28410973 ttttacagagggaaaaatcgaaaatgacctatattacaggggataaagacctattaaccctaat 28410910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 37193623 - 37193564
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    ||||||| |||||||||| |||||||| ||  ||||||||||||||||||||||| ||||    
T  37193623 cacatcaaagattctgctcagtcacagtgcatagggggcaatcttgaagaatctttattt 37193564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 199
Target Start/End: Complemental strand, 44311342 - 44311205
Alignment:
Q  62 attctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaaaa-ggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaaag 160  Q
    |||||||||| ||| ||||| | |||||||||||||||||||||| |||| | | |||||||||||          ||||||| | |  |||| ||||||    
T  44311342 attctgctgattcaaagggcacggggggcaatcttgaagaatctttattttacatggacggaatctaaatttttc-ttttacatgagaaaaaagcaaaag 44311244  T
Q  161 taccctatattacagggggtaaagacctattaaccctaa 199  Q
    |  ||||||||||||||||||||| ||||||||||||||    
T  44311243 tgtcctatattacagggggtaaaggcctattaaccctaa 44311205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 47146366 - 47146425
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattac-agggggtaaagacctattaacc 195  Q
    |||||||||| |||||| |||||||  |||||||||| ||||||||||||||||||||||    
T  47146366 ttttacagggagcaaaaccaaaagtgacctatattacaagggggtaaagacctattaacc 47146425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 2274563 - 2274649
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||| || ||| ||||| |||||||||||||| |  ||||| ||||| ||||| ||||||||||||| |||| |||||||||||||    
T  2274563 catgtaggtgcctcatcaaagattctgctgagttaatgggcttaggggacaatcgtgaagaatcttcattttacaaggacggaatct 2274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 2472590 - 2472640
Alignment:
Q  145 ggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    |||| |||||| ||| || ||||||||||||||||||||||||||||||||    
T  2472590 gggggaaaatcgaaaataacctatattacagggggtaaagacctattaacc 2472640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 9439427 - 9439461
Alignment:
Q  164 cctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||||||||||||||||||||||||||    
T  9439427 cctatattacagggggtaaagacctattaacccta 9439461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 13903379 - 13903429
Alignment:
Q  147 ggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||| |||||||  |||||||||||||||||||||| |||||||||||    
T  13903379 ggcaaaaccaaaagtgacctatattacagggggtaaagatctattaaccct 13903429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 14978709 - 14978767
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||| ||||||||| |||||||  ||||||| ||||||||||||| ||||||||||||    
T  14978709 ttacaaggggcaaaaccaaaagtgtcctatataacagggggtaaaggcctattaaccct 14978767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 24987640 - 24987606
Alignment:
Q  164 cctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||||||||||||||||||||||||||    
T  24987640 cctatattacagggggtaaagacctattaacccta 24987606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 31648584 - 31648642
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||| ||||| ||||| || |||||||||||||||||||||  |||||||||    
T  31648584 ttttacaggggacaaaaccaaaaataacctatattacagggggtaaaggtctattaacc 31648642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 40247381 - 40247435
Alignment:
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaa 193  Q
    ||||||||| |||| ||||||| |||||||||||| |||||||||||||||||||    
T  40247381 tacaggggggaaaaccaaaagtgccctatattacatgggggtaaagacctattaa 40247435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 18458827 - 18458860
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  18458827 cctatattacagggggtaaagacctattaaccct 18458860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 25235806 - 25235773
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  25235806 cctatattacagggggtaaagacctattaaccct 25235773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 25600988 - 25600927
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccctaa 199  Q
    |||||||||| |||| |||||||  |||||||| ||| ||||||||||||||||||||||||    
T  25600988 ttacaggggggaaaaccaaaagtgacctatattgcagaggggtaaagacctattaaccctaa 25600927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 44200386 - 44200325
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||| | |||| ||||| |  ||||||||||| |||||||||||||||||||||||    
T  44200386 ttttacagggtggaaaaccaaaaatggcctatattacaaggggtaaagacctattaacccta 44200325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 47022094 - 47022127
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  47022094 cctatattacagggggtaaagacctattaaccct 47022127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 2059424 - 2059480
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaa 193  Q
    ||||||||| || ||||||| || |  ||||||||||||||||||||||||||||||    
T  2059424 ttttacaggagggaaaatcagaaatgacctatattacagggggtaaagacctattaa 2059480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 10028002 - 10028034
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  10028002 cctatattacagggggtaaagacctattaaccc 10028034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 50105407 - 50105455
Alignment:
Q  150 aaaatcaaaagtaccctatattacagg-gggtaaagacctattaaccct 197  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  50105407 aaaatcaaaagtgacctatattacaggagggtaaagacctattaaccct 50105455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 2472422 - 2472387
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||| ||||||||||||||||||||    
T  2472422 cctatattacaggggttaaagacctattaaccctaa 2472387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 7112553 - 7112494
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||| |||| | ||| |  | |||||||||||||||||||||||||||||||    
T  7112553 ttttacagggggaaaaaccgaaaatgacatatattacagggggtaaagacctattaaccc 7112494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 197
Target Start/End: Complemental strand, 13545609 - 13545578
Alignment:
Q  166 tatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||    
T  13545609 tatattacagggggtaaagacctattaaccct 13545578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 16786146 - 16786205
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaacc 195  Q
    |||||||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||    
T  16786146 ttttacagggggtaaaatcaaaagtgacctatattacatgggggtaaagctctattaacc 16786205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 18458626 - 18458567
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||| || |||||||||| |  | ||||||||||||||||||||||| |||||||    
T  18458626 ttttacaggagggaaaatcaaaaatgacatatattacagggggtaaagacctcttaaccc 18458567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 22604687 - 22604722
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||| ||||||||||||||||||||    
T  22604687 cctatattacaggggttaaagacctattaaccctaa 22604722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 25601916 - 25601975
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||| |||||| |||| |||||||  |||||||| |||||||||||| |||||||||||    
T  25601916 ttttataggggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaaccc 25601975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 30536504 - 30536437
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    |||||||| ||||||| |||| ||||| ||||||| ||||||||||| | |||| |||||||||||||    
T  30536504 agattctgatgagtcatagggatcaggaggcaatcatgaagaatctttattttacaaggacggaatct 30536437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 32130704 - 32130641
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattac-agggggtaaagacctattaaccctaa 199  Q
    ||||||||| || |||| |||||||  |||||||||| ||||||||||| ||||||||||||||    
T  32130704 ttttacaggtggtaaaaccaaaagtgacctatattactagggggtaaaggcctattaaccctaa 32130641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 36343213 - 36343150
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagg-gggtaaagacctattaaccctaat 200  Q
    ||||||||||| ||||  |||| |  ||||||||||||| ||||||||||||||||||||||||    
T  36343213 tttacaggggggaaaacaaaaaatgacctatattacaggagggtaaagacctattaaccctaat 36343150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 44312128 - 44312187
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||||| | || || ||||||||| |||||||||||| ||||| |||||    
T  44312128 ttttacagggggcaaaaccgaatgtgccctatatttcagggggtaaaggcctataaaccc 44312187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 52083631 - 52083580
Alignment:
Q  146 gggcaaaatcaaaagtaccctatattacaggggg-taaagacctattaaccc 196  Q
    |||||||| ||||| | ||||||||||||||||| |||||||||||||||||    
T  52083631 gggcaaaaccaaaaatgccctatattacaggggggtaaagacctattaaccc 52083580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 8984913 - 8984871
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggggg 179  Q
    |||||||||||||||||||||||||  ||||||||||| ||||    
T  8984913 ttttacagggggcaaaatcaaaagtggcctatattacatgggg 8984871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 21853448 - 21853418
Alignment:
Q  164 cctatattacagggggtaaagacctattaac 194  Q
    |||||||||||||||||||||||||||||||    
T  21853448 cctatattacagggggtaaagacctattaac 21853418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 196
Target Start/End: Original strand, 30659435 - 30659465
Alignment:
Q  166 tatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||    
T  30659435 tatattacagggggtaaagacctattaaccc 30659465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 40373522 - 40373564
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaa 92  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||    
T  40373522 gccacatcatagattatgctgagtcacagagctcagagggcaa 40373564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 200
Target Start/End: Complemental strand, 47021867 - 47021833
Alignment:
Q  166 tatattacagggggtaaagacctattaaccctaat 200  Q
    |||||||| ||||||||||||||||||||||||||    
T  47021867 tatattacggggggtaaagacctattaaccctaat 47021833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 49201384 - 49201442
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||| |||| |||||||  |||||||| |||||||||||  |||||||||||    
T  49201384 tttacaggggggaaaaccaaaagtgacctatattgcagggggtaaaagcctattaaccc 49201442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 51809815 - 51809769
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaa 183  Q
    |||||||||||| |||| ||||| || ||||||||||||||||||||    
T  51809815 ttttacagggggaaaaaccaaaaataacctatattacagggggtaaa 51809769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 5561744 - 5561793
Alignment:
Q  150 aaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||||||  |||| ||||| ||||||| ||||||||||||||    
T  5561744 aaaatcaaaagtacctaatataacaggaggtaaagccctattaaccctaa 5561793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 7112748 - 7112777
Alignment:
Q  166 tatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||||||||||||||||||    
T  7112748 tatattacagggggtaaagacctattaacc 7112777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 15336407 - 15336378
Alignment:
Q  164 cctatattacagggggtaaagacctattaa 193  Q
    ||||||||||||||||||||||||||||||    
T  15336407 cctatattacagggggtaaagacctattaa 15336378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 22591326 - 22591277
Alignment:
Q  150 aaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    |||| |||||||  ||||||||||| ||||||||| ||||||||||||||    
T  22591326 aaaaccaaaagtgacctatattacaaggggtaaaggcctattaaccctaa 22591277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 27548954 - 27549014
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctata--ttacagggggtaaagacctattaacc 195  Q
    ||||||||| ||||||| ||||||| | |||||  ||||||||||||||| ||||||||||    
T  27548954 ttttacaggcggcaaaaccaaaagtgcactatatattacagggggtaaaggcctattaacc 27549014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 28724357 - 28724324
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||| ||||||||||||||||||||||||||||    
T  28724357 cctattttacagggggtaaagacctattaaccct 28724324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 30434312 - 30434279
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||||||||||||| |||||||||    
T  30434312 cctatattacagggggtaaagaccgattaaccct 30434279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 33934697 - 33934636
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaaccct 197  Q
    ||||||||||||||||| |||||||   |||||||||||||| |||||  ||||||||||||    
T  33934697 ttttacagggggcaaaaccaaaagtgatctatattacaggggcgtaaaaccctattaaccct 33934636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 40246334 - 40246277
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||  ||||||||||| |  ||||||||||||||||||  |||||||||||    
T  40246334 ttacagggggggaaatcaaaagtgcgttatattacagggggtaaatgcctattaaccc 40246277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 197
Target Start/End: Original strand, 44826340 - 44826369
Alignment:
Q  168 tattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||    
T  44826340 tattacagggggtaaagacctattaaccct 44826369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 4646816 - 4646756
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||| ||| |||| ||||| |  | ||||||| ||||||||||||||||||||||||    
T  4646816 ttttacagaggggaaaaccaaaaatgacttatattagagggggtaaagacctattaaccct 4646756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 5348195 - 5348163
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||| ||||||||||||||||||||    
T  5348195 cctatattacagagggtaaagacctattaaccc 5348163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 7780219 - 7780278
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||| |||||||   |||||||||| ||||||||| | ||||||||||    
T  7780219 ttttacagggggcaaaaccaaaagtgatctatattaca-ggggtaaaggcatattaaccct 7780278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 16698900 - 16698868
Alignment:
Q  165 ctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||| |||||||||||||||||||||    
T  16698900 ctatattacagagggtaaagacctattaaccct 16698868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 20132441 - 20132381
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccc 196  Q
    ||||||| ||| ||||| |||||||  |||||||||||| ||||||||| |||||||||||    
T  20132441 ttttacaagggccaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccc 20132381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 24545516 - 24545456
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||| |||| ||||||| |||||||  ||||||||| ||||||||||  ||||||||||||    
T  24545516 tttttcaggaggcaaaaccaaaagtgacctatattatagggggtaaaagcctattaaccct 24545456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 31648135 - 31648075
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccc 196  Q
    |||||||||||  |||| |||||||  ||||||||||| |||||||||| |||||||||||    
T  31648135 ttttacaggggataaaaccaaaagtgacctatattacatgggggtaaaggcctattaaccc 31648075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 35034320 - 35034352
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||| |||||||||||||||||    
T  35034320 cctatattacaggggataaagacctattaaccc 35034352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 38132695 - 38132727
Alignment:
Q  169 attacagggggtaaagacctattaaccctaata 201  Q
    |||||||||||||||||| ||||||||||||||    
T  38132695 attacagggggtaaagacatattaaccctaata 38132727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 42736846 - 42736878
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||| |||||||||||||||||    
T  42736846 cctatattacaggggataaagacctattaaccc 42736878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 46136118 - 46136086
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||||||||||| |||||||||    
T  46136118 cctatattacagggggtaaagacttattaaccc 46136086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 47145205 - 47145145
Alignment:
Q  139 ttacagggg-gcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccct 197  Q
    ||||||||| ||||||||||||||  |||||||||||| |||||||||  |||||||||||    
T  47145205 ttacaggggtgcaaaatcaaaagtgacctatattacaggggggtaaaggtctattaaccct 47145145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 50596183 - 50596215
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||| |||||||||||||||||||||    
T  50596183 cctatattacaaggggtaaagacctattaaccc 50596215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 9e-46; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 195
Target Start/End: Original strand, 27164559 - 27164714
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||          |||    
T  27164559 catgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattt 27164658  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  27164659 tacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 27164714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 39809987 - 39810150
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||           ||    
T  39809987 catgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaataatt 39810086  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaatat 202  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  39810087 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctaatat 39810150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 27163273 - 27163115
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          |||    
T  27163273 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaatttttt 27163174  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    |||||||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  27163173 tacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 27163115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 39808795 - 39808649
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||          ||||||||||||    
T  39808795 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaaatttttttttttacaggggg 39808696  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||| ||||||| |||||||||||| |||||||||||||||||||||    
T  39808695 caaaaccaaaagtgccctatattaca-ggggtaaagacctattaaccc 39808649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 39 - 197
Target Start/End: Original strand, 42350076 - 42350236
Alignment:
Q  39 gtcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnt 137  Q
    ||||||| || |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| |||| |||||||||||||               
T  42350076 gtcatgtaggtgccacatcatagattctgctaagtcacagagctcagtgggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaa 42350175  T
Q  138 tttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    |||||||||||||||| ||||| | | |||||||||| |||||||||||||||||||||||    
T  42350176 tttacagggggcaaaaccaaaaatgctctatattacaggggggtaaagacctattaaccct 42350236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 42349108 - 42348961
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||| |            ||||||||||    
T  42349108 gccacatcatagattctgctgagtcacagggttcaggggacaatcttgaagaatcttcattttacaaggacggaat-ttaaaaagaaaaattacaggggg 42349010  T
Q  149 caaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccc 196  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  42349009 caaaaccaaaagtgccctatattacaggggggtaaagacctattaaccc 42348961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 28574684 - 28574609
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  28574684 cacatcatagattctgctgagtcacagggttcagggggcaatcttgaagaatctttattttaaaaggacggaatct 28574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 1600222 - 1600077
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||| ||||||||||||||||    ||| ||||||||||| |||||||||||||||| | |||||||||||||          ||||| ||||||    
T  1600222 gccacatcaaagattctgctgagtcaattagcttagggggcaatcgtgaagaatcttcattttataaggacggaatctaatttttt--ttttataggggg 1600125  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||| |||||||  | |||||||||||||||||||||||||||||||    
T  1600124 caaaaccaaaagtggcttatattacagggggtaaagacctattaaccc 1600077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 1601164 - 1601313
Alignment:
Q  51 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnt-tttacaggggg 148  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||| |||||||||||||          | |||||| ||||    
T  1601164 ccacatcaaagattctgctgagtcactgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaaatatttaca-gggg 1601262  T
Q  149 caaaatcaaaagtaccctatattaca-gggggtaaagacctattaacccta 198  Q
    |||||||||||||  ||||||||| | |||||||||| |||||||||||||    
T  1601263 caaaatcaaaagtgtcctatattagaggggggtaaaggcctattaacccta 1601313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 1601827 - 1601671
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||  |||||||||| |          |||    
T  1601827 catgtaggtgccacatcaaagattctgctgagtcactgggcttagggggcaatcgtgaagaatcttcattttactaggacggaattt---aatttttttt 1601731  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaacccta 198  Q
    || ||||||||||| ||||||| ||||||||||||| |||||||||  ||||||||||||    
T  1601730 tatagggggcaaaaccaaaagtgccctatattacagaggggtaaaggtctattaacccta 1601671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 5704439 - 5704501
Alignment:
Q  49 cgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  5704439 cgccacatcatagatactgctgagtcacagggctcagggggtaatcttgaagaatctttattt 5704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 1602808 - 1602885
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatt-taaaaggacggaatct 126  Q
    ||||||||| ||||||||||||||||| ||| | ||||||||||| ||||||||||||||| || |||||||||||||    
T  1602808 gccacatcaaagattctgctgagtcactgggtttagggggcaatcgtgaagaatcttcattatacaaggacggaatct 1602885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 2270290 - 2270348
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||||    
T  2270290 tttacagggggcaaaaccaaaagtgacctataatacagggggtaaagacctattaaccc 2270348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 199
Target Start/End: Original strand, 28561931 - 28562079
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggca 150  Q
    ||||||| ||||||||||||||||||| ||  ||| | ||||||||||||||||| | |||| |||||||||||||            ||||| |||| |    
T  28561931 cacatcaaagattctgctgagtcacagtgcataggtgacaatcttgaagaatctttattttacaaggacggaatctaaaaaaataaaattacaaggggga 28562030  T
Q  151 aaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||| | |||||||||||||| ||||| ||||| ||||||||    
T  28562031 aaatcaaaagtgctctatattacaggggttaaagccctataaaccctaa 28562079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 199
Target Start/End: Original strand, 28567429 - 28567577
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggca 150  Q
    ||||||| ||||||||||||||||||| ||  ||| | ||||||||||||||||| | |||| |||||||||||||            ||||| |||| |    
T  28567429 cacatcaaagattctgctgagtcacagtgcataggtgacaatcttgaagaatctttattttacaaggacggaatctaaaaaaataaaattacaaggggga 28567528  T
Q  151 aaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||| | |||||||||||||| ||||| ||||| ||||||||    
T  28567529 aaatcaaaagtgctctatattacaggggttaaagccctataaaccctaa 28567577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 39513926 - 39513865
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||  |||||||||||||    
T  39513926 ttttacagggggcaaaaccaaaagtgacctatattacagggggtaaatgcctattaacccta 39513865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 12330392 - 12330328
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaata 201  Q
    |||||||||||| ||||  | || || ||||||||||||||||||||||||||||||||||||||    
T  12330392 ttttacagggggaaaaactagaaataacctatattacagggggtaaagacctattaaccctaata 12330328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 199
Target Start/End: Original strand, 28575027 - 28575172
Alignment:
Q  55 atcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggcaaaa 153  Q
    |||| ||||||||||||||||||| ||  || |||||||||||||||||||| | |||| ||||||| |||||           ||| ||||||| ||||    
T  28575027 atcaaagattctgctgagtcacagtgcatagtgggcaatcttgaagaatctttattttataaggacgaaatctaaaaaaaaaaatttgcaggggg-aaaa 28575125  T
Q  154 tcaaaagtaccctatattacaggg-ggtaaagacctattaaccctaa 199  Q
     ||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  28575126 ccaaaagtgccctatattacagggtggtaaagtcctattaaccctaa 28575172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 40702008 - 40702068
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||||||  ||||||  ||||||||||||||||||||| ||||||||||||    
T  40702008 ttttacagggggcaaaacgaaaagtgacctatattacagggggtaaaggcctattaaccct 40702068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 193
Target Start/End: Complemental strand, 3252308 - 3252167
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggca 150  Q
    ||||||| ||||||| ||||||||  ||||| ||||||||||| ||||||||||| | |||| |||||||||||||            ||||||||||||    
T  3252308 cacatcagagattctactgagtcaatgggcttagggggcaatcgtgaagaatctttattttataaggacggaatctaaataaaaaa--ttacagggggca 3252211  T
Q  151 aaatcaaaagtaccctatattacag-ggggtaaagacctattaa 193  Q
    ||| | |||||||||||||||| || ||||||||| ||||||||    
T  3252210 aaaccgaaagtaccctatattatagaggggtaaaggcctattaa 3252167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 31985065 - 31985007
Alignment:
Q  143 agggggcaaaatcaaaagtaccctatattacaggg-ggtaaagacctattaaccctaat 200  Q
    ||||||||||| |||||||  |||||||||||||| |||||||||||||||||||||||    
T  31985065 agggggcaaaaccaaaagtgacctatattacagggaggtaaagacctattaaccctaat 31985007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 34901561 - 34901503
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||  ||||||||||    
T  34901561 ttttacagggggcaaaaccaaaagtgacctatattacagggggtaaaagcctattaacc 34901503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 39515121 - 39515186
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatata 203  Q
    |||||||||||  ||| |||||||  |||||||||||||| |||||| ||||||||||||||||||    
T  39515121 tttacagggggtcaaaccaaaagtgacctatattacagggagtaaaggcctattaaccctaatata 39515186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 28561579 - 28561527
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatc 104  Q
    ||||||||||| |||| |||||||||||||||| | |||||||||||||||||    
T  28561579 cacatcatagactctgttgagtcacagggctcaagcggcaatcttgaagaatc 28561527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 28567077 - 28567025
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatc 104  Q
    ||||||||||| |||| |||||||||||||||| | |||||||||||||||||    
T  28567077 cacatcatagactctgttgagtcacagggctcaagcggcaatcttgaagaatc 28567025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 34985347 - 34985382
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||||||||||||||||||||||||    
T  34985347 cctatattacagggggtaaagacctattaaccctaa 34985382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 27987552 - 27987586
Alignment:
Q  165 ctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||||||||||||||||||||||||||    
T  27987552 ctatattacagggggtaaagacctattaaccctaa 27987586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 28044854 - 28044888
Alignment:
Q  165 ctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||||||||||||||||||||||||||    
T  28044854 ctatattacagggggtaaagacctattaaccctaa 28044888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 29309597 - 29309555
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaatataaat 206  Q
    |||||||||||||||||||||||||||||||||| | ||||||    
T  29309597 cctatattacagggggtaaagacctattaacccttaaataaat 29309555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 31986226 - 31986287
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca--gggggtaaagacctattaaccc 196  Q
    |||||||||||||||||  ||||||  |||||||||||  ||||||||||||||||||||||    
T  31986226 ttttacagggggcaaaactaaaagtgacctatattacacggggggtaaagacctattaaccc 31986287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 14329625 - 14329658
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  14329625 cctatattacagggggtaaagacctattaaccct 14329658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 25277731 - 25277764
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  25277731 cctatattacagggggtaaagacctattaaccct 25277764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 960522 - 960554
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  960522 cctatattacagggggtaaagacctattaaccc 960554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 9513860 - 9513816
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaatataaatag 208  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||||    
T  9513860 cctatattacagggggtaaagacatattaaccccaatatatatag 9513816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 27543650 - 27543682
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  27543650 cctatattacagggggtaaagacctattaaccc 27543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 43945228 - 43945164
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaata 201  Q
    |||||||||||| |||| | ||| |  | ||||||||||||||||||||||||||||||| ||||    
T  43945228 ttttacagggggaaaaaccgaaaatgacatatattacagggggtaaagacctattaacccaaata 43945164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 197
Target Start/End: Complemental strand, 43400701 - 43400670
Alignment:
Q  166 tatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||    
T  43400701 tatattacagggggtaaagacctattaaccct 43400670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 9768302 - 9768344
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggggg 179  Q
    ||||||||||| |||||||||||||  ||||||||||||||||    
T  9768302 ttttacaggggacaaaatcaaaagtgacctatattacaggggg 9768344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 40652651 - 40652621
Alignment:
Q  164 cctatattacagggggtaaagacctattaac 194  Q
    |||||||||||||||||||||||||||||||    
T  40652651 cctatattacagggggtaaagacctattaac 40652621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 3912505 - 3912538
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||| ||||||||||    
T  3912505 cctatattacagggggtaaagacttattaaccct 3912538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 5873745 - 5873685
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||| |||| |||||||  |||||||| |||||| ||||| |||||||||||||    
T  5873745 ttttacaggggg-aaaaccaaaagtgacctatattgcaggggttaaagccctattaacccta 5873685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 8388146 - 8388117
Alignment:
Q  164 cctatattacagggggtaaagacctattaa 193  Q
    ||||||||||||||||||||||||||||||    
T  8388146 cctatattacagggggtaaagacctattaa 8388117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 25601972 - 25602005
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||| ||||||||||||||||||||||    
T  25601972 cctatattacatggggtaaagacctattaaccct 25602005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 27198176 - 27198143
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||| ||||||||||||||||||    
T  27198176 cctatattacaggggataaagacctattaaccct 27198143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 27987329 - 27987296
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||| ||||||||||||||||||||||||    
T  27987329 cctatattatagggggtaaagacctattaaccct 27987296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 28044631 - 28044598
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||| ||||||||||||||||||||||||    
T  28044631 cctatattatagggggtaaagacctattaaccct 28044598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 28561491 - 28561435
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||| |||  ||||||| ||||||||||||||||||||||  |||||||||    
T  28561491 tttacaggggggaaac-caaaagtgccctatattacagggggtaaagctctattaacc 28561435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 28566989 - 28566933
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||| |||  ||||||| ||||||||||||||||||||||  |||||||||    
T  28566989 tttacaggggggaaac-caaaagtgccctatattacagggggtaaagctctattaacc 28566933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 29309799 - 29309832
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||||||||| |||||||||||||    
T  29309799 cctatattacagggggtaaaaacctattaaccct 29309832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 31343600 - 31343661
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||| |||| |||||||  ||||||||||| |||||||||  | ||||||||||    
T  31343600 ttttacaggggggaaaaccaaaagtgacctatattacatggggtaaagcaccattaacccta 31343661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 40411424 - 40411465
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaatataaa 205  Q
    |||||||| ||||||||||||||||||||||| ||| |||||    
T  40411424 cctatattgcagggggtaaagacctattaaccttaaaataaa 40411465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 6819255 - 6819195
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccc 196  Q
    |||||||||||| |||| |||||||  |||||||| || |||||||||| |||||||||||    
T  6819255 ttttacaggggggaaaaccaaaagtgacctatattgcaggggggtaaaggcctattaaccc 6819195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 25653763 - 25653703
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||| |||| ||||| |  ||||||||||||||||||||   |||||||||||    
T  25653763 ttttacaggggggaaaaccaaaaatgacctatattacagggggtaaaacactattaaccct 25653703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 34902737 - 34902793
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaac 194  Q
    |||||||||| |||| |||||||| ||||||||||||||| |||||  |||||||||    
T  34902737 ttacaggggggaaaaccaaaagtaacctatattacaggggtgtaaatgcctattaac 34902793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 37402537 - 37402481
Alignment:
Q  143 agggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||| |||| |||||||  |||||||| |||||||||||| | ||||||||||||    
T  37402537 aggggggaaaaccaaaagtgacctatattgcagggggtaaaggcttattaaccctaa 37402481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 39683006 - 39683070
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccctaat 200  Q
    ||||| ||||||||||||||||||| |||||||||| ||  ||||||||  |||||||| |||||    
T  39683006 ttttatagggggcaaaatcaaaagtgccctatattatagaagggtaaagcactattaacactaat 39683070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 41565330 - 41565270
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggggg-taaagacctattaaccc 196  Q
    |||||||||||||||| || ||| |  | |||||||||||||| |||||||||||||||||    
T  41565330 ttttacagggggcaaactcgaaaatgacatatattacaggggggtaaagacctattaaccc 41565270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 9e-46; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 34740045 - 34739886
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          |||    
T  34740045 catgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaatttttt 34739946  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaacccta 198  Q
    |||||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  34739945 tacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaacccta 34739886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 20962350 - 20962193
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||          |||    
T  20962350 catgtaggcgccacatcatagattctgctgagtcacagggctcaggaggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaatttt 20962251  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  20962250 tacagggggcaaaaccaaaagtgccatatattacagggggtaaagatctattaaccct 20962193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 34741294 - 34741454
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||          |||    
T  34741294 catgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattt 34741393  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaa 199  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||||||||| |||||    
T  34741394 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaagcctaa 34741454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 29248389 - 29248241
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||           ||||||| |||    
T  29248389 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaataaatttacagcggg 29248290  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
     |||| |||||||  ||||||||||||||||||||||||||||||||||    
T  29248289 taaaaccaaaagtgtcctatattacagggggtaaagacctattaaccct 29248241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 52 - 196
Target Start/End: Original strand, 12566850 - 12566996
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggca 150  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||          ||||||||||||||    
T  12566850 cacatcatagattcagctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaagaaacaaattttacagggggca 12566949  T
Q  151 aaatcaaaagtaccctatattac-agggggtaaagacctattaaccc 196  Q
    ||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  12566950 aaaccaaaagtgccctatattacaagggggtaaagacctattaaccc 12566996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 29249610 - 29249768
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||           ||    
T  29249610 catgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaaggacgaaatctaaaaaaaaaaatt 29249709  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    |||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  29249710 tacagggggcaaaaccaaaagttccctatattacaggggggtaaagacctattaaccct 29249768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 20963600 - 20963757
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||           ||    
T  20963600 catgtaggtgccacatcatagattctgctgagtcacagggctcaggggacaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatt 20963699  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccc 196  Q
    |||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||    
T  20963700 tacagggggcaaagccaaaagtgccctatattacaggggggtaaagacctattaaccc 20963757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 50881324 - 50881480
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||| ||||||||||||||||  ||||| | ||||||||| |||||||||||||||| | || ||||||||||          |||    
T  50881324 catgtaggtgccacatcaaagattctgctgagtcaatgggcttaaggggcaatcgtgaagaatcttcattttacaatgacggaatctaattttttt-ttt 50881422  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  50881423 tacagggggcaaaaccaaaagtggcctatattacagggggtaaagacctattaaccct 50881480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 46427158 - 46427230
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaa 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| ||||||||||    
T  46427158 cacatcatagattctgctgagtcacagggctcagggggcaatcttgatgaatctttattttataaggacggaa 46427230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 51752812 - 51752686
Alignment:
Q  68 ctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaaagtaccct 166  Q
    ||||||||  ||||| | ||||||||| |||||||||||||||| | |||||||||||||          |||||||||||||||||||||||||  | |    
T  51752812 ctgagtcaatgggcttatggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttattttttttacagggggcaaaatcaaaagtgtcat 51752713  T
Q  167 atattacagggggtaaagacctattaa 193  Q
    |||||||||||||||||||||||||||    
T  51752712 atattacagggggtaaagacctattaa 51752686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 55499407 - 55499249
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||| ||||||||||||||||  ||||| ||||||||||| |||| |||||||| |||| |||||||||||||          |||    
T  55499407 catgtaggtgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatctaaaaaacaatttt 55499308  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagg-gggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||  | | |||||| || ||||||||||| |||||||||    
T  55499307 tacagggggcaaaatcaaaagtgtcatgtattaccggagggtaaagaccgattaaccct 55499249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 54554440 - 54554382
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  54554440 ttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 54554382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 2438389 - 2438249
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaa 158  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||| |||| | ||||| |||||||          ||||||| ||| ||||||||||    
T  2438389 agattctgctgagtcataggggtcagggagcaatcctgaagaatctttattttacaaggatggaatctaaaaaaaaaattttacaagggacaaaatcaaa 2438290  T
Q  159 agtaccctatattacagggggtaaagacctattaaccctaa 199  Q
      ||| |||||||||||||||||||||| ||||||| ||||    
T  2438289 tatactctatattacagggggtaaagacatattaactctaa 2438249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 54555349 - 54555419
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatataaata 207  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||||||| | ||||||||    
T  54555349 ttttacagggggcaaaaccaaaagtgccatatattacagggggtaaagacttattaacccaattataaata 54555419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 198
Target Start/End: Complemental strand, 50880053 - 50879907
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggca 150  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||| | ||||  ||||||||||||            ||| |||| |||    
T  50880053 cacatcatagattctgctgagtcacaaggctcagggggcaatcctgaaaaatctttattttaccaggacggaatctaaaaaaaaaa-attagagggagca 50879955  T
Q  151 aaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    ||| |||||||  |||||||||||||  ||||||||||||||||||||    
T  50879954 aaaccaaaagtggcctatattacaggaagtaaagacctattaacccta 50879907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 21994384 - 21994328
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  21994384 ttacaggggacaaaatcaaaagtgtcctatattacagggggtaaagacctattaacc 21994328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 34027192 - 34027251
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||| |||||||||||    
T  34027192 ttttacagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccc 34027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 40479442 - 40479576
Alignment:
Q  66 tgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaaagtacc 164  Q
    ||||||||||  ||||| ||||||||||| |||||||||||||||| | ||||||||||| |            |||||| || ||||| ||||||||||    
T  40479442 tgctgagtcattgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatttaaaaaaaaaaaattacagaggacaaaaccaaaagtacc 40479541  T
Q  165 ctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||| || ||| ||||||||||||||||    
T  40479542 ctatattacagaggataatgacctattaaccctaa 40479576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 43537752 - 43537824
Alignment:
Q  55 atcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||||| || | |||| |||||||||||||    
T  43537752 atcatagattctgctgagtcatatggctcagggggcaatcctgaagaatttttattttagaaggacggaatct 43537824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 43860911 - 43860971
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||| | ||||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  43860911 ttttacaggagacaaaaccaaaagtgccctatattacaggaggtaaagacctattaaccct 43860971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 200
Target Start/End: Original strand, 55500305 - 55500467
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct-nnnnnnnnnntt 138  Q
    ||||| || ||||||||| |||||||||| |||||  ||||| ||||||||||| ||||||||||||| |||| | ||| |||||||                 
T  55500305 catgtaggtgccacatcaaagattctgcttagtcaacgggcttagggggcaatcgtgaagaatcttcattttacagggatggaatctaaaaaaaataaaa 55500404  T
Q  139 ttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaat 200  Q
    ||||||||||||||| ||||| |  ||||||||||| ||||||||||||||||||||||||||    
T  55500405 ttacagggggcaaaaccaaaaatgtcctatattacaggggggtaaagacctattaaccctaat 55500467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 43537596 - 43537521
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||||| |||||||||||||||||| |||  ||||||||||| ||||||||||| | |||| |||||||||||||    
T  43537596 cacatcaaagattctgctgagtcacaaggcatagggggcaatcctgaagaatctttattttacaaggacggaatct 43537521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 51754201 - 51754258
Alignment:
Q  140 tacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||  |||||||||||    
T  51754201 tacaggtgacaaaaccaaaagtaccctatattacagggggtaaagctctattaaccct 51754258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 54053629 - 54053568
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccct 197  Q
    |||||||||||||||||||||||||| |||||||||||| ||| ||||| | ||||||||||    
T  54053629 ttttacagggggcaaaatcaaaagtaacctatattacagagggttaaaggcttattaaccct 54053568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 550732 - 550673
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||| |||||||||  |||| |  |||||||||||||||||||||||||||||||||    
T  550732 ttttacaaggggcaaaactaaaaatgacctatattacagggggtaaagacctattaaccc 550673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 50138547 - 50138488
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||| |||| | ||| |  |||||||||||||||||||||||||||||||||    
T  50138547 ttttacagggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 50138488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 51164020 - 51164075
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaac 194  Q
    ||||||||||||||| |||||||  ||||||||| ||||||||||| |||||||||    
T  51164020 ttacagggggcaaaaccaaaagtgacctatattatagggggtaaaggcctattaac 51164075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 11563542 - 11563576
Alignment:
Q  164 cctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||||||||||||||||||||||||||    
T  11563542 cctatattacagggggtaaagacctattaacccta 11563576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 37273420 - 37273454
Alignment:
Q  164 cctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||||||||||||||||||||||||||    
T  37273420 cctatattacagggggtaaagacctattaacccta 37273454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 20125443 - 20125476
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  20125443 cctatattacagggggtaaagacctattaaccct 20125476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 20613025 - 20612964
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||| |||| |||||||  |||||||| |||||||||||| |||||||| ||||    
T  20613025 ttttacaggggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaatccta 20612964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 21780154 - 21780121
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  21780154 cctatattacagggggtaaagacctattaaccct 21780121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 24215766 - 24215799
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  24215766 cctatattacagggggtaaagacctattaaccct 24215799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 51162137 - 51162076
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggggg-taaagacctattaaccct 197  Q
    ||||| |||||||||||||||||||  ||||||||| |||||| ||||| ||||||||||||    
T  51162137 ttttagagggggcaaaatcaaaagtgacctatattatagggggataaaggcctattaaccct 51162076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 11862026 - 11862086
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||| |||||||   ||||||||||  |||||||| ||||||||||||||    
T  11862026 ttacagggggcaaaaccaaaagtgttctatattacaaagggtaaaggcctattaaccctaa 11862086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 41331826 - 41331766
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||| || |||| |||||||  |||||||| |||||| ||||||||||||||||||||    
T  41331826 ttacaggaggaaaaaccaaaagtgacctatattgcaggggataaagacctattaaccctaa 41331766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 11861951 - 11861900
Alignment:
Q  148 gcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||| ||||||| | |||||||||||||||||||| || |||||||||||    
T  11861951 gcaaaaccaaaagtgctctatattacagggggtaaaggcccattaaccctaa 11861900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 17289802 - 17289739
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggggg-taaagacctattaaccctaa 199  Q
    |||||||||||| |||| ||||| |  |||||||| ||||||| ||||||||||||||||||||    
T  17289802 ttttacaggggggaaaaccaaaaatgacctatatttcagggggataaagacctattaaccctaa 17289739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 24701199 - 24701258
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||| |||| |||| |||||||  |||||||| |||||||||||| |||||||||||    
T  24701199 ttttacatgggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaaccc 24701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 35539805 - 35539840
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||||||||||| |||||||||||||||    
T  35539805 cctatattacagggggtaaatacctattaaccctaa 35539840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 50727622 - 50727587
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||||||||||| |||||||||||||||    
T  50727622 cctatattacagggggtaaaaacctattaaccctaa 50727587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 50735636 - 50735601
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||||||||||| |||||||||||||||    
T  50735636 cctatattacagggggtaaaaacctattaaccctaa 50735601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 5401821 - 5401759
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggggg-taaagacctattaacccta 198  Q
    ||||||||| || |||||| ||| |  |||||||||||||||| |||||||||||||||||||    
T  5401821 ttttacaggagggaaaatcgaaaatgacctatattacaggggggtaaagacctattaacccta 5401759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 7272324 - 7272266
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccc 196  Q
    |||||||||| |||| | ||| || ||||||||||| ||||||||||||||||||||||    
T  7272324 ttacaggggggaaaaccgaaaataacctatattacaagggggtaaagacctattaaccc 7272266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 9001475 - 9001441
Alignment:
Q  165 ctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||||||| |||||||||||||||    
T  9001475 ctatattacagggggtaaaaacctattaaccctaa 9001441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 9136402 - 9136460
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||||| |||||||   |||||||||||||| ||||  ||||||||||    
T  9136402 ttttacagggggcaaaaccaaaagtgatctatattacaggggataaatgcctattaacc 9136460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 15694517 - 15694459
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||||| ||||||||| |||||||    ||||||||||||||||||| |||||||||||    
T  15694517 tttacaaggggcaaaaccaaaagtggtgtatattacagggggtaaaggcctattaaccc 15694459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 27579546 - 27579516
Alignment:
Q  164 cctatattacagggggtaaagacctattaac 194  Q
    |||||||||||||||||||||||||||||||    
T  27579546 cctatattacagggggtaaagacctattaac 27579516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 48029471 - 48029414
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||| |||||  ||| || |||||||||||||||| ||||||||||||    
T  48029471 ttacagggggcaaaaccaaaatgacc-taaattacagggggtaaaggcctattaaccct 48029414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 49630594 - 49630651
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    |||||||| || |||||||||||||| | ||||||||| |||||||| |||||||||||    
T  49630594 ttttacagaggacaaaatcaaaagtatcatatattaca-ggggtaaatacctattaacc 49630651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 16493550 - 16493517
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||| ||||||||||||||||||||    
T  16493550 cctatattacaggaggtaaagacctattaaccct 16493517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 17695972 - 17696033
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||| |||||||  | ||||||||| ||||||||||  |||||||||||||    
T  17695972 ttacagggggcaaaaccaaaagtgtcttatattacaggggggtaaaggactattaaccctaa 17696033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 18454454 - 18454491
Alignment:
Q  164 cctatattacagggg-gtaaagacctattaaccctaat 200  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  18454454 cctatattacaggggggtaaagacctattaaccctaat 18454491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 21246509 - 21246472
Alignment:
Q  164 cctatattacagggg-gtaaagacctattaaccctaat 200  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  21246509 cctatattacaggggtgtaaagacctattaaccctaat 21246472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 21798365 - 21798328
Alignment:
Q  164 cctatattacaggggg-taaagacctattaaccctaat 200  Q
    |||||||||||||||| |||||||||||||||||||||    
T  21798365 cctatattacaggggggtaaagacctattaaccctaat 21798328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 22272962 - 22272929
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||||||||| |||||||||||||    
T  22272962 cctatattacagggggtaaaaacctattaaccct 22272929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 38656080 - 38656113
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||| ||||||||||||||||||||||||    
T  38656080 cctatattatagggggtaaagacctattaaccct 38656113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 12352470 - 12352514
Alignment:
Q  150 aaaatcaaaagtaccctatattacagggggtaaagacctattaac 194  Q
    |||| |||||||  ||||||||||||||||||||| |||||||||    
T  12352470 aaaaccaaaagtgacctatattacagggggtaaaggcctattaac 12352514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 14183670 - 14183610
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||| | |||||| ||||||| |||||||||| ||||||||||   |||||||||||    
T  14183670 ttttacagagagcaaaaccaaaagtgccctatattagagggggtaaaacactattaaccct 14183610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 15695178 - 15695238
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaacccta 198  Q
    ||||||||||||||| |||||||    |||| |||||||| ||||||||||||||||||||    
T  15695178 ttacagggggcaaaaccaaaagtggtgtataatacaggggggtaaagacctattaacccta 15695238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 21798590 - 21798622
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||| |||||||||||||||||    
T  21798590 cctatattacaggggataaagacctattaaccc 21798622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 34025966 - 34025910
Alignment:
Q  145 ggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaat 200  Q
    ||||||||| |||||||  ||||||||||| ||||||||||  ||||||||||||||    
T  34025966 ggggcaaaaccaaaagtgacctatattacaagggggtaaaggtctattaaccctaat 34025910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 35904850 - 35904914
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaata 201  Q
    |||||||||||| ||||| |||| |  |||||||||||||| ||||||  | |||||||||||||    
T  35904850 ttttacaggggggaaaataaaaaatgacctatattacagggagtaaagcaccattaaccctaata 35904914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 37600951 - 37600875
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatc 125  Q
    ||||||||| |||||||||||||||| ||| || || || ||||| | ||||||||| | |||| ||||||||||||    
T  37600951 gccacatcagagattctgctgagtcataggacttagaggccaatcctaaagaatctttattttacaaggacggaatc 37600875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 46094265 - 46094297
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||| ||||||||||||||||||||    
T  46094265 cctatattacagagggtaaagacctattaaccc 46094297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 47321018 - 47320982
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaat 200  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  47321018 cctatattacaggggataaagacctataaaccctaat 47320982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 51965404 - 51965372
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||| ||||||||||||||||||    
T  51965404 cctatattacagggagtaaagacctattaaccc 51965372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 6e-44; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 50 - 200
Target Start/End: Complemental strand, 17763484 - 17763332
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          ||||||||||||    
T  17763484 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacaggggg 17763385  T
Q  149 caaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccctaat 200  Q
    ||||| |||||||  |||||||||||| |||||||||||||||||||||||||    
T  17763384 caaaaccaaaagtgtcctatattacagaggggtaaagacctattaaccctaat 17763332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 17764600 - 17764757
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          |||    
T  17764600 catgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaattttttt 17764699  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccc 196  Q
    |||||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||    
T  17764700 tacagggggcaaaaccaaaagtgccctatattacagtggagtaaagacctattaaccc 17764757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 41 - 205
Target Start/End: Original strand, 48170162 - 48170325
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct-nnnnnnnnnntt 138  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||            |    
T  48170162 catgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaat 48170261  T
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatataaa 205  Q
    ||||||||||||||| |||||||    ||||||||||| ||||||||||| ||||||||||||||||    
T  48170262 ttacagggggcaaaaccaaaagt---gtatattacaggaggtaaagacctcttaaccctaatataaa 48170325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 34158203 - 34158057
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggca 150  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||||||||||||          |||| |||||||||    
T  34158203 cacatcatagattctgctgagtcacagggatctgggggcaatcttgaagaatcttcattttacaaggacggaatct-aatttttttttttncagggggca 34158105  T
Q  151 aaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    ||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  34158104 aaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 34158057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 1830959 - 1830809
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| | || ||||||||||           |||||| ||||    
T  1830959 gccacaccatagattctgctaagtcacagggctcagggagcaatcttgaagaatctttattttacaaagacggaatctaaaaaaaaaaatttacaagggg 1830860  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
     ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  1830859 gaaaatcaaaagtatcctatattacagggggtaaagccctattaaccctaa 1830809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 52 - 197
Target Start/End: Original strand, 1831892 - 1832037
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggca 150  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||| |||||  ||||||           ||||||||||| |    
T  1831892 cacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatctttattttacaaggatagaatctaaaaaaaaaaatttacaggggg-a 1831990  T
Q  151 aaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||    
T  1831991 aaatcaaaagtgccctatattacagggggtaaagccctattaaccct 1832037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 9554160 - 9554318
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||||||||| ||||||||||  ||||| ||||||||||| ||||||||||||| |||| |||||||||||||          |||    
T  9554160 catgtaggtgccacatcatagattatgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaattttttttttt 9554259  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagg-gggtaaagacctattaaccct 197  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||||  ||||||||||    
T  9554260 tacagggggcaaaaccaaaagtgccctatattacaggagggtaaagatttattaaccct 9554318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 9553546 - 9553399
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnt-tttacagggggc 149  Q
    ||||||| ||||| |||||||| |  ||||| ||||||||||| |||||||||||||||| | |||||||||||||            |||||||| |||    
T  9553546 cacatcaaagattatgctgagttattgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaataatttacaggaggc 9553447  T
Q  150 aaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  9553446 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 9553399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 48168971 - 48168915
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48168971 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatgttca 48168915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 11056880 - 11056728
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatc---tnnnnnnnnnnttttacagg 145  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||| |||| ||||||||||||   |          ||||||| |    
T  11056880 gccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctgatttttttttttttttacaag 11056781  T
Q  146 gggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    |||||||| ||||||| || ||||||||| |||||||||||||||||||||||    
T  11056780 gggcaaaaccaaaagtgccttatattacaggggggtaaagacctattaaccct 11056728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 48168909 - 48168849
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  48168909 ttttacagggggcaaaaccaaaagtgccctatattacagagggtaaagacctattaaccct 48168849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 5219034 - 5219095
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    |||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||||    
T  5219034 ttttacagggggcaaaatcaaaagtgacctatattacaggggggtaaaggcctattaaccct 5219095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 1594122 - 1594182
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||| |||| ||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  1594122 ttttgcaggaggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccct 1594182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 14554446 - 14554521
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatataaatagatag 212  Q
    |||||||||||| ||||  |||| |  ||||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  14554446 ttttacaggggggaaaacaaaaaatgacctatattacagggggtaaaggcctattaaccctaatattaatatatag 14554521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 25776406 - 25776492
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||| || ||||||||| ||||||||||||||||  ||||| ||||||||||  |||||||| |||| |||| |||||||||||||    
T  25776406 catgtaggtgccacatcaaagattctgctgagtcaatgggcttagggggcaattgtgaagaattttcattttacaaggacggaatct 25776492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 33757463 - 33757409
Alignment:
Q  143 agggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||| ||||||||||||  |||||||||||||||||||||| |||||||||||    
T  33757463 aggggggaaaatcaaaagtgacctatattacagggggtaaagatctattaaccct 33757409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 13772551 - 13772611
Alignment:
Q  52 cacatcatagattctgctga-gtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    |||||||| ||||||||||| ||||||| |||||||||| |||||||||||||||| ||||    
T  13772551 cacatcattgattctgctgaagtcacagagctcagggggtaatcttgaagaatctttattt 13772611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 42509036 - 42509096
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||||||   |||||||||||    
T  42509036 ttttacagggggcaaaaccaaaagtgccctatattacagagggtaaaacactattaaccct 42509096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 8174943 - 8174888
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctatta 192  Q
    |||||||||  |||||| ||||| | ||||||||||||||||||||||||||||||    
T  8174943 ttttacaggatgcaaaaccaaaaatgccctatattacagggggtaaagacctatta 8174888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 13279415 - 13279474
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||| |||| | ||| |  |||||||||||||||||||||||||||||||||    
T  13279415 ttttacagggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 13279474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 35891144 - 35891093
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| ||||    
T  35891144 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttattt 35891093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 42202219 - 42202161
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||| ||| ||||||||  |||||||| ||||||||||||||||||||||||    
T  42202219 ttttacaggggggaaa-tcaaaagtgacctatattgcagggggtaaagacctattaaccc 42202161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 1589445 - 1589387
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaac 194  Q
    ||||||||||||||||| |||||||  |||||||||||| ||||||||| |||||||||    
T  1589445 ttttacagggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaac 1589387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 11058168 - 11058210
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggggg 179  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  11058168 ttttacaggaggcaaaaccaaaagtaccctatattacaggggg 11058210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 6269560 - 6269527
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  6269560 cctatattacagggggtaaagacctattaaccct 6269527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 9915683 - 9915650
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  9915683 cctatattacagggggtaaagacctattaaccct 9915650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 9923595 - 9923562
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  9923595 cctatattacagggggtaaagacctattaaccct 9923562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 19272474 - 19272507
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  19272474 cctatattacagggggtaaagacctattaaccct 19272507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 23161152 - 23161099
Alignment:
Q  145 ggggcaaaatcaaaagtaccctatattacagg-gggtaaagacctattaaccct 197  Q
    |||| |||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  23161152 ggggaaaaaccaaaagtaacctatattacaggagggtaaagacctattaaccct 23161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 23784616 - 23784583
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  23784616 cctatattacagggggtaaagacctattaaccct 23784583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 24434967 - 24434906
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggggg-taaagacctattaaccct 197  Q
    |||||||| ||||||||  |||||| ||| ||||||||||||| ||||||||||||||||||    
T  24434967 ttttacagagggcaaaacgaaaagtgcccgatattacaggggggtaaagacctattaaccct 24434906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 31186727 - 31186666
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||||||| ||| |||||| ||| |  |||||||||||| ||||||||||||||||||||||    
T  31186727 ttttacagagggaaaaatcgaaaatgacctatattacagagggtaaagacctattaacccta 31186666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 35913310 - 35913343
Alignment:
Q  165 ctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||||||||||||||||||||||||||    
T  35913310 ctatattacagggggtaaagacctattaacccta 35913343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 23371481 - 23371449
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  23371481 cctatattacagggggtaaagacctattaaccc 23371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 38193219 - 38193251
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  38193219 cctatattacagggggtaaagacctattaaccc 38193251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 39580191 - 39580223
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  39580191 cctatattacagggggtaaagacctattaaccc 39580223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 48945243 - 48945183
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||| ||||||||| ||||| |  |||||||||||| ||||||| |||||||||||||    
T  48945243 ttttacaaggggcaaaaccaaaaatgacctatattacagagggtaaaaacctattaaccct 48945183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 5909772 - 5909713
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||| |||| || || |  ||||||||||| |||||||||||||||||||||    
T  5909772 ttttacagggggaaaaaccagaaatgacctatattacatggggtaaagacctattaaccc 5909713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 8175970 - 8176009
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggg 178  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  8175970 ttacagggggcaaaaccaaaagtaccttatattacagggg 8176009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 10980621 - 10980656
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||| |||||||||||||||||||||||    
T  10980621 cctatattacagagggtaaagacctattaaccctaa 10980656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 13286863 - 13286926
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaa 199  Q
    |||||||||||| |||| || || |  ||||||||||| |||||||||||||||||||||||||    
T  13286863 ttttacaggggggaaaaccagaaatgacctatattacaagggggtaaagacctattaaccctaa 13286926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 13771706 - 13771647
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    ||||||| |||||||||||||||| || ||  | ||||||||||||||||||||| ||||    
T  13771706 cacatcaaagattctgctgagtcatagtgcatatggggcaatcttgaagaatctttattt 13771647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 195
Target Start/End: Original strand, 13797636 - 13797667
Alignment:
Q  164 cctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||||||||||||||||||||    
T  13797636 cctatattacagggggtaaagacctattaacc 13797667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 201
Target Start/End: Complemental strand, 19979681 - 19979646
Alignment:
Q  166 tatattacagggggtaaagacctattaaccctaata 201  Q
    ||||||||||||||||||||||||||||||| ||||    
T  19979681 tatattacagggggtaaagacctattaacccaaata 19979646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 24436305 - 24436372
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    |||||||||||||||| | || ||||||||||||| ||| ||||||| | |||| |||||||||||||    
T  24436305 agattctgctgagtcatatgggtcagggggcaatcctgaggaatctttattttacaaggacggaatct 24436372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 47637853 - 47637802
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    |||||||| ||||||| |||| ||||||||||||| ||||||||||| ||||    
T  47637853 agattctgatgagtcataggggtcagggggcaatcatgaagaatctttattt 47637802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 21237349 - 21237403
Alignment:
Q  143 agggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||| |||||||  ||||||||| ||||||||||  ||||||||||||    
T  21237349 agggggcaaaaccaaaagtgacctatattatagggggtaaatgcctattaaccct 21237403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 24555926 - 24555960
Alignment:
Q  164 cctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||||||||||| ||||||||||||||    
T  24555926 cctatattacagggggtaaaaacctattaacccta 24555960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 24845670 - 24845636
Alignment:
Q  164 cctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||||| |||||||||||||||||||||    
T  24845670 cctatattacaggaggtaaagacctattaacccta 24845636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 26050207 - 26050173
Alignment:
Q  164 cctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||| |||||||||||||||||||||||||    
T  26050207 cctatattagagggggtaaagacctattaacccta 26050173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 26059566 - 26059532
Alignment:
Q  164 cctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||| |||||||||||||||||||||||||    
T  26059566 cctatattagagggggtaaagacctattaacccta 26059532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 39065415 - 39065373
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaatataaat 206  Q
    |||||||||||||||||||||||||||||| ||| | ||||||    
T  39065415 cctatattacagggggtaaagacctattaatccttaaataaat 39065373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 44569076 - 44569138
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||||  |||||| ||| |  ||| ||||||||||| ||||||||||||||||||||    
T  44569076 ttttacaggggagaaaatcgaaaatgacctgtattacaggggataaagacctattaaccctaa 44569138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 45163945 - 45163903
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaatataaat 206  Q
    ||||||||||| |||||||||||||||||||| ||| ||||||    
T  45163945 cctatattacaaggggtaaagacctattaaccttaaaataaat 45163903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 48896527 - 48896481
Alignment:
Q  148 gcaaaatcaaaagtaccctatattacagggggtaaagacctattaac 194  Q
    |||||| |||||||  ||||||||||||| |||||||||||||||||    
T  48896527 gcaaaaccaaaagtgacctatattacaggaggtaaagacctattaac 48896481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 10688490 - 10688457
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||| |||||||||||||||||||||    
T  10688490 cctatattacagagggtaaagacctattaaccct 10688457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 13882635 - 13882602
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||| |||||||||||||||||||||    
T  13882635 cctatattacagagggtaaagacctattaaccct 13882602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 21298044 - 21298015
Alignment:
Q  166 tatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||||||||||||||||||    
T  21298044 tatattacagggggtaaagacctattaacc 21298015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 24555764 - 24555703
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagg-gggtaaagacctattaaccct 197  Q
    ||||||||| || ||||||| || |  ||||||||||||| |||||||||||||||||||||    
T  24555764 ttttacaggtggaaaaatcagaaatgacctatattacaggagggtaaagacctattaaccct 24555703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 24757989 - 24758050
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaaccct 197  Q
    ||||| ||||||||||| ||| |||   |||||||||||||| |||||||||||||||||||    
T  24757989 ttttatagggggcaaaaccaatagtgatctatattacaggggggtaaagacctattaaccct 24758050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 26050428 - 26050461
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||| ||||||||||||||||||    
T  26050428 cctatattacaggggttaaagacctattaaccct 26050461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 26059787 - 26059820
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||| ||||||||||||||||||    
T  26059787 cctatattacaggggttaaagacctattaaccct 26059820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 35891067 - 35891010
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||||| |||||||  |||||||||| ||||||||||||||||||   ||||||||||    
T  35891067 ttacagagggcaaatccaaaagtaccttatattacagggggtaaaactctattaaccc 35891010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 44413916 - 44413879
Alignment:
Q  164 cctatattacagg-gggtaaagacctattaaccctaat 200  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  44413916 cctatattacaggagggtaaagacctattaaccctaat 44413879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 3307701 - 3307733
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||||||||||| |||||||||    
T  3307701 cctatattacagggggtaaagacttattaaccc 3307733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 5766670 - 5766638
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||||||||||| |||||||||    
T  5766670 cctatattacagggggtaaagacatattaaccc 5766638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 14079021 - 14079057
Alignment:
Q  164 cctatattaca-gggggtaaagacctattaaccctaa 199  Q
    ||||||||||| |||||||||||||||||||||||||    
T  14079021 cctatattacatgggggtaaagacctattaaccctaa 14079057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 14389049 - 14389085
Alignment:
Q  164 cctatattaca-gggggtaaagacctattaaccctaa 199  Q
    ||||||||||| |||||||||||||||||||||||||    
T  14389049 cctatattacatgggggtaaagacctattaaccctaa 14389085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 15037430 - 15037466
Alignment:
Q  164 cctatattacagggg-gtaaagacctattaaccctaa 199  Q
    ||||||||||||||| |||||||||||||||||||||    
T  15037430 cctatattacaggggggtaaagacctattaaccctaa 15037466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 19410569 - 19410509
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccc 196  Q
    |||||||||||  |||| || || || ||||||||||| ||||||||||||||||||||||    
T  19410569 ttttacaggggaaaaaaccagaaataacctatattacaagggggtaaagacctattaaccc 19410509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 19979905 - 19979937
Alignment:
Q  166 tatattacagggggtaaagacctattaacccta 198  Q
    ||||||| |||||||||||||||||||||||||    
T  19979905 tatattatagggggtaaagacctattaacccta 19979937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 45865649 - 45865709
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccc 196  Q
    |||||||||||| |||| |||||||  ||||||||||| ||||||| || |||||||||||    
T  45865649 ttttacagggggtaaaaccaaaagtgacctatattacaggggggtagaggcctattaaccc 45865709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 48104753 - 48104785
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||| |||||||||||||||||||    
T  48104753 cctatattacaggaggtaaagacctattaaccc 48104785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 9e-43; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 24235531 - 24235689
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||          |||    
T  24235531 catgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaaaaataaatttt 24235630  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccct 197  Q
    |||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  24235631 tacagggggcaaaaccaaaagtgccctatattacagaggggtaaagacctattaaccct 24235689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 24234475 - 24234328
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggca 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||          ||||||||||||||    
T  24234475 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttttttttttacagggggca 24234376  T
Q  151 aaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    ||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  24234375 aaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 24234328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 22056642 - 22056482
Alignment:
Q  38 tgtcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnn 136  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||              
T  22056642 tgtcatgtaggtgccacatcatagattctgctgagtcacagagctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaa 22056543  T
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggg-ggtaaagacctattaaccc 196  Q
     |||||||||||||||| ||||||| ||||||||||||||| | |||||||||||||||||    
T  22056542 atttacagggggcaaaaccaaaagtgccctatattacagggagttaaagacctattaaccc 22056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 22058179 - 22058336
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||||           ||    
T  22058179 catgtaggtgccacatcatagattctgctgagtcatagggctcaaggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaagaatt 22058278  T
Q  140 tacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccc 196  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  22058279 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccc 22058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 41 - 198
Target Start/End: Original strand, 56013 - 56171
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||| ||||||||||||||||  ||||| ||||||||||| |||||||||||||||| | || ||||||||||            |    
T  56013 catgtaggtgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaacgacggaatctaaaaaaaaaaaat 56112  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  56113 tacaggggacaaaatcaaaagtgccctatattacagggggtaaagacctattaacccta 56171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 24914586 - 24914440
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||||||||            ||||||||||    
T  24914586 gccacatcatagattctgctgagtcacaggacttagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacaggggg 24914487  T
Q  149 caaaatcaaaagtaccctatattaca-gggggtaaagacctattaac 194  Q
    |||||||||||||  ||||||||||| |||||||| |||||||||||    
T  24914486 caaaatcaaaagtgtcctatattacaggggggtaatgacctattaac 24914440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 12322713 - 12322861
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||| |||||||||||||||| | |||||||||||||           || ||||||||    
T  12322713 gccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatt-acaggggg 12322811  T
Q  149 caaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccct 197  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  12322812 caaaatcaaaagtgccctatattacaggggggtaaagacctattaaccct 12322861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 197
Target Start/End: Complemental strand, 12321721 - 12321561
Alignment:
Q  39 gtcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnt 137  Q
    ||||||| || ||||||||| |||||||||| |||||   |||| | ||||||||| |||||||||||||||| | ||||||| |||||               
T  12321721 gtcatgtaggtgccacatcaaagattctgctaagtcaataggcttaaggggcaatcgtgaagaatcttcattttacaaggacgaaatctataaaaaaaaa 12321622  T
Q  138 tttacagggggcaaaatcaaaagtaccctatattacaggggg-taaagacctattaaccct 197  Q
     ||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  12321621 attacaggaggcaaaaccaaaagtaccctatattacagggggataaagacctattaaccct 12321561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 34762319 - 34762179
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaa 158  Q
    ||||||||||||||||  ||||| ||||||||||  |||||||||||||||| | ||||||| |||||           ||||||||| |||||| ||||    
T  34762319 agattctgctgagtcaatgggcttagggggcaattgtgaagaatcttcattttacaaggacgaaatctataaaaaaaaatttacagggagcaaaaccaaa 34762220  T
Q  159 agtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||| |||||||||||||| ||||||||||||||| ||||||    
T  34762219 agtgccctatattacaggaggtaaagacctattagccctaa 34762179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 5999857 - 5999796
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  5999857 gccacatcatagattctgctgagtcacagagctcagggggcaatcctgaagaatctttattt 5999796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 51 - 196
Target Start/End: Complemental strand, 54952 - 54807
Alignment:
Q  51 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggc 149  Q
    |||||||| ||||||||||||||||  | ||| ||||||||||| |||| |||||||| |||| |||||||||||||          ||||||||||| |    
T  54952 ccacatcaaagattctgctgagtcaatgagcttagggggcaatcgtgaataatcttcattttacaaggacggaatctaattttttttttttacaggggac 54853  T
Q  150 aaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||| |||||||  ||||||||||||| || ||||||||||||||||    
T  54852 aaaaccaaaagtgtcctatattacaggagg-aaagacctattaaccc 54807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 14328644 - 14328703
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||    
T  14328644 ttttacagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 14328703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 14421654 - 14421713
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||    
T  14421654 ttttacagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 14421713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 23270207 - 23270277
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatataaata 207  Q
    |||||||| || |||||||||||||  ||||||||| ||||||||||||||||||||||| | ||||||||    
T  23270207 ttttacagaggacaaaatcaaaagtgacctatattaaagggggtaaagacctattaacccaattataaata 23270277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 3063489 - 3063541
Alignment:
Q  145 ggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  3063489 ggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccct 3063541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 6000582 - 6000641
Alignment:
Q  52 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattt 111  Q
    ||||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||    
T  6000582 cacatcaaagattctgctgagtcacagggcatagggggcaatcctgaagaatctttattt 6000641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 14327428 - 14327370
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||||| |||||||  | ||||||||||||||||||| ||||||||||    
T  14327428 ttttacagggggcaaaaccaaaagtgacgtatattacagggggtaaaggcctattaacc 14327370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 14420438 - 14420380
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    ||||||||||||||||| |||||||  | ||||||||||||||||||| ||||||||||    
T  14420438 ttttacagggggcaaaaccaaaagtgacgtatattacagggggtaaaggcctattaacc 14420380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 33485074 - 33485115
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacaggggg 179  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  33485074 tttacagggggcaaaaccaaaagtaccctatattacaggggg 33485115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 33483756 - 33483696
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacaggg-ggtaaagacctattaaccc 196  Q
    |||||||| |||||||| |||||||  |||||||||||||| |||||||||||||||||||    
T  33483756 ttttacagagggcaaaaccaaaagtgtcctatattacagggtggtaaagacctattaaccc 33483696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 22366229 - 22366276
Alignment:
Q  150 aaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||    
T  22366229 aaaatcaaaagtgacctatattgcagggggtaaagacctattaaccct 22366276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 20754571 - 20754633
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||| |||||| |||| |  ||||||||||||||||||||| || |||||||||||    
T  20754571 ttttacaggggacaaaataaaaaatgacctatattacagggggtaaaggccaattaaccctaa 20754633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 24387772 - 24387818
Alignment:
Q  150 aaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||| |||| || |||||||||||||||||||||||||||||||||    
T  24387772 aaaattaaaaataacctatattacagggggtaaagacctattaaccc 24387818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 29942468 - 29942501
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  29942468 cctatattacagggggtaaagacctattaaccct 29942501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 32614231 - 32614170
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||| |||||| ||||||| |||||  |||||||||||| |||||||| |||||||||||||    
T  32614231 ttttccaggggacaaaatcgaaagtggcctatattacagagggtaaaggcctattaacccta 32614170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 6000672 - 6000731
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||| |||| ||||||| | ||||||||||||||||||||  |||||||||||||    
T  6000672 ttacaggggg-aaaaccaaaagtgctctatattacagggggtaaagctctattaaccctaa 6000731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 10344082 - 10344050
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  10344082 cctatattacagggggtaaagacctattaaccc 10344050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 13114430 - 13114398
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  13114430 cctatattacagggggtaaagacctattaaccc 13114398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 22574056 - 22574088
Alignment:
Q  165 ctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||||||||||||||||||||||    
T  22574056 ctatattacagggggtaaagacctattaaccct 22574088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 12321192 - 12321235
Alignment:
Q  150 aaaatcaaaagtaccctatattacagggggtaaagacctattaa 193  Q
    |||||||||| || ||||||||||||| ||||||||||||||||    
T  12321192 aaaatcaaaaataacctatattacaggaggtaaagacctattaa 12321235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 19412449 - 19412402
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaag 184  Q
    |||||||||||| |||| ||||| || |||||||||||||||||||||    
T  19412449 ttttacaggggggaaaaccaaaaataacctatattacagggggtaaag 19412402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 26469066 - 26469007
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||| |||||||||||||||  | ||||||||| ||||||||  |||||||||||    
T  26469066 ttttacaggaggcaaaatcaaaagtgacatatattacaaggggtaaatgcctattaaccc 26469007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 31851816 - 31851757
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||| |||| | ||| |  ||||||||||||||| ||||||||||||||||||    
T  31851816 tttacaggggggaaaaccgaaaatgacctatattacaggggataaagacctattaaccct 31851757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 22573834 - 22573796
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaatat 202  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  22573834 cctatattatagggggtaaagacctattaaccctcatat 22573796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 26644689 - 26644748
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||  |||| |||||||  ||||||||||| |||| ||||||||||||||||||    
T  26644689 ttttacagggg--aaaaccaaaagtgacctatattacaaggggaaaagacctattaacccta 26644748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 26750655 - 26750714
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    |||||||||||  |||| |||||||  ||||||||||| |||| ||||||||||||||||||    
T  26750655 ttttacagggg--aaaaccaaaagtgacctatattacaaggggaaaagacctattaacccta 26750714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 30409671 - 30409729
Alignment:
Q  141 acagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||| |||| |||||||  |||||||| |||| ||||||| ||||||||||||||    
T  30409671 acaggggggaaaaccaaaagtgacctatattgcaggaggtaaaggcctattaaccctaa 30409729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 14585377 - 14585336
Alignment:
Q  166 tatattacagggggtaaagacctattaaccctaatataaata 207  Q
    ||||||||||||| |||| ||||||||||| |||||||||||    
T  14585377 tatattacaggggataaaaacctattaaccataatataaata 14585336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 24062199 - 24062166
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||| ||||||||||||||||||||||||    
T  24062199 cctatattatagggggtaaagacctattaaccct 24062166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 3120334 - 3120393
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||| |||  |||||||  |||||||| |||||||||||| |||||||||||||    
T  3120334 tttacaggggggaaac-caaaagtgacctatattgcagggggtaaaggcctattaacccta 3120393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 7922349 - 7922317
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    ||||||||||||||| |||||||||||||||||    
T  7922349 cctatattacaggggataaagacctattaaccc 7922317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 10545890 - 10545830
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||| |||||| ||| |  ||||||||||||||||||||   |||||||||||    
T  10545890 ttttacagggggaaaaatcgaaaatgacctatattacagggggtaaaacactattaaccct 10545830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 13114652 - 13114680
Alignment:
Q  166 tatattacagggggtaaagacctattaac 194  Q
    |||||||||||||||||||||||||||||    
T  13114652 tatattacagggggtaaagacctattaac 13114680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 13497954 - 13498017
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggg--gtaaagacctattaacccta 198  Q
    ||||||| |||| ||||||| || |  |||||||||||||||  ||||||||||||||||||||    
T  13497954 ttttacaaggggaaaaatcagaaatgacctatattacagggggggtaaagacctattaacccta 13498017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 13639541 - 13639509
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||| ||||||    
T  13639541 cctatattacagggggtaaagacctactaaccc 13639509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 34715905 - 34715960
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacc 195  Q
    |||||||||| ||||||  || || |||||||||||||||||||||| |||||||||    
T  34715905 ttacaggggg-aaaatcggaaataacctatattacagggggtaaagaactattaacc 34715960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 196 - 348
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct-nnnnnnnnnnttttacagggg 147  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||           |||||||||||    
T  196 gccacatcatagattctgctgagtcaaagggctcagggggcaatcttgaagaatcttcattttataaggacggaatctaaaaaaaaactttttacagggg 295  T
Q  148 gcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaa 199  Q
    |||||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  296 gcaaaaccaaaagtgccctatattacatgggggtaaagacctattaaccctaa 348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0804 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 38 - 197
Target Start/End: Complemental strand, 2893 - 2732
Alignment:
Q  38 tgtcatgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattta-aaaggacggaatctnnnnnnnnnn 136  Q
    |||||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||              
T  2893 tgtcatgtaggtgccatatcatagattctgctgagtcacggggctcagggggcaatcttgaagaattttcatttacaagggacggaatctaaaaaaaaaa 2794  T
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggg-gtaaagacctattaaccct 197  Q
     |||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||||    
T  2793 atttacaggaggcaaaaccaaaagtgccctatattacaggggagtaaagacctattaaccct 2732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 41 - 199
Target Start/End: Complemental strand, 4864 - 4704
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttt 139  Q
    ||||| || ||||||||| ||||||||||||||||   | || | ||||||||| |||||||||||||||| | |||||||||||||          |||    
T  4864 catgtaggtgccacatcaaagattctgctgagtcaattgacttacggggcaatcgtgaagaatcttcattttacaaggacggaatctaattttttttttt 4765  T
Q  140 tacagggggcaaaatcaaaagtaccctatattacag-ggggtaaagacctattaaccctaa 199  Q
    |||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  4764 tacaggaggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctaa 4704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 5793 - 5879
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatct 126  Q
    ||||| || ||||||||| | ||||||||||||||  ||||| ||||||||||| ||||| ||||||| |||| |||||||||||||    
T  5793 catgtaggtgccacatcaaatattctgctgagtcaatgggcttagggggcaatcgtgaagtatcttcattttacaaggacggaatct 5879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 5895 - 5953
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagg-gggtaaagacctattaaccc 196  Q
    ||||| ||||||||| ||||||| |||||||||||||| | ||||||||||||||||||    
T  5895 ttacaaggggcaaaaccaaaagtgccctatattacaggagtgtaaagacctattaaccc 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 196
Target Start/End: Complemental strand, 64640 - 64503
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaa 158  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| |||| | ||||||| |||||           || ||||||||||||| ||||    
T  64640 agattctgctgagtcacaggggtcagggggcaatcctgaagaatctttattttacaaggacgaaatctaaaaaaaaaaatt-acagggggcaaaaccaaa 64542  T
Q  159 agtaccctatattacag-ggggtaaagacctattaaccc 196  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  64541 agtaccctatattacaggggggtaaagacctattaaccc 64503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 65962 - 66106
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnntttt-acagggggcaaaatcaa 157  Q
    ||||||||||||||||  ||||| ||||||||||| |||||||||||||||| | |||||||||||||          |||| ||||||||||||| |||    
T  65962 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttttttttttttacagggggcaaaaccaa 66061  T
Q  158 aagtaccctatattaca-gggggtaaagacctattaaccctaata 201  Q
    ||||  | ||||||||| |||||||||||||||||||||||||||    
T  66062 aagtgtcatatattacaggggggtaaagacctattaaccctaata 66106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 10227 - 10079
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacaggggg 148  Q
    ||||| ||| ||||| ||||||||||  ||| | ||||||||||  |||||||||||||||| | |||||| ||||||          ||||||||||||    
T  10227 gccacctcagagattttgctgagtcaatgggattagggggcaattgtgaagaatcttcattttacaaggactgaatctaattttttttttttacaggggg 10128  T
Q  149 caaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||  |||||| |||||||||||||||||||||||||||||||||||    
T  10127 caaaactaaaagtgccctatattacagggggtaaagacctattaaccct 10079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 60 - 198
Target Start/End: Original strand, 11488 - 11628
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaa 158  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| | |||| |||||||||||||           |||||||||||||||| ||||    
T  11488 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggacggaatctaaaaaaaaaaatttacagggggcaaaaccaaa 11587  T
Q  159 agtaccctatattaca-gggggtaaagacctattaacccta 198  Q
    |||||  ||||||||| ||||||||||  ||||||||||||    
T  11588 agtactatatattacaggggggtaaagctctattaacccta 11628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 60 - 196
Target Start/End: Original strand, 24857 - 24995
Alignment:
Q  60 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaa 158  Q
    ||||| |||||||||| |||| ||||||||||||| ||||||||||| |||| | ||||||||||| |           |||| ||||||||||||||||    
T  24857 agattttgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggacggaatgtgaaaaaaaatatttatagggggcaaaatcaaa 24956  T
Q  159 agtaccctatattac-agggggtaaagacctattaaccc 196  Q
    ||||||||||||||| |||||||||||  ||||||||||    
T  24957 agtaccctatattacaagggggtaaagctctattaaccc 24995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 23744 - 23685
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaacc 195  Q
    |||||||||||||||||||||||||  | ||||||||| |||||||||||||||||||||    
T  23744 ttttacagggggcaaaatcaaaagtgtcttatattacatgggggtaaagacctattaacc 23685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 204
Target Start/End: Complemental strand, 35658 - 35591
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaatataa 204  Q
    ||||||||||||||||| |||||||  ||||||||  |||||||||||||||||||||||||||||||    
T  35658 ttttacagggggcaaaaccaaaagtgacctatattttagggggtaaagacctattaaccctaatataa 35591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 636 - 696
Alignment:
Q  139 ttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaa 199  Q
    |||||||||| |||| || || |  |||||||||||| |||||||||||||||||||||||    
T  636 ttacaggggggaaaaccataaatgacctatattacagagggtaaagacctattaaccctaa 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 8230 - 8079
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatc-tnnnnnnnnnnttttacagggg 147  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||| |||| |||||||| |||| |||||||||||| |          ||||||| |||    
T  8230 gccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatcttaatttttttattttaca-ggg 8132  T
Q  148 gcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaa 199  Q
    |||||| |||||||  ||||||||||| |||||||||||||||||||||||||    
T  8131 gcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctaa 8079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 15812 - 15661
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatc-tnnnnnnnnnnttttacagggg 147  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||| |||| |||||||| |||| |||||||||||| |          ||||||| |||    
T  15812 gccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatcttaatttttttattttaca-ggg 15714  T
Q  148 gcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaa 199  Q
    |||||| |||||||  ||||||||||| |||||||||||||||||||||||||    
T  15713 gcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctaa 15661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 25764 - 25613
Alignment:
Q  50 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaatc-tnnnnnnnnnnttttacagggg 147  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||| |||| |||||||| |||| |||||||||||| |          ||||||| |||    
T  25764 gccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatcttaatttttttattttaca-ggg 25666  T
Q  148 gcaaaatcaaaagtaccctatattaca-gggggtaaagacctattaaccctaa 199  Q
    |||||| |||||||  ||||||||||| |||||||||||||||||||||||||    
T  25665 gcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctaa 25613  T

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Target: scaffold0725 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 3973 - 3913
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||||    
T  3973 ttttacagggggcaaaaccaaaagtgtcctacattacagggggtaaagacctattaaccct 3913  T

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Target: scaffold0725; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 4955 - 5016
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattaca--gggggtaaagacctattaaccct 197  Q
    |||||||||||||||| |||||||  |||||||||||  |||||||||||| ||||||||||    
T  4955 tttacagggggcaaaaccaaaagtgacctatattacagggggggtaaagacttattaaccct 5016  T

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Target: scaffold0246 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 16031 - 15870
Alignment:
Q  41 catgttggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca-tttaaaaggacggaat---ctnnnnnnnnnn 136  Q
    ||||| || ||||||||||||||| || |||||||  ||||| |||||||||||| |||||||||||| |||| |||||||||||    |              
T  16031 catgtaggtgccacatcatagattttgttgagtcaatgggcttagggggcaatctcgaagaatcttcattttacaaggacggaatttaattttttttttt 15932  T
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaacccta 198  Q
    ||||||||||| |||||  ||||||  | ||||||||||||| |||||||||||||||||||    
T  15931 ttttacaggggacaaaacaaaaagtgtcatatattacaggggataaagacctattaacccta 15870  T

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Target: scaffold0246; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 17381 - 17515
Alignment:
Q  66 tgctgagtcacagggctcagggggcaatcttgaagaatcttcatttaa-aaggacggaatctnnnnnnnnnnttttacagggggcaaaatcaaaagtacc 164  Q
    ||||||||||  ||||| ||||||||||| |||||||||||||||| | ||||||||||| |            |||||| || ||||| ||||||||||    
T  17381 tgctgagtcattgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatttaaaaaaaaaaaattacagaggacaaaaccaaaagtacc 17480  T
Q  165 ctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||| || ||| ||||||||||||||||    
T  17481 ctatattacagaggataatgacctattaaccctaa 17515  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 227423 - 227365
Alignment:
Q  143 agggggcaaaatcaaaagtaccctatattacaggg-ggtaaagacctattaaccctaat 200  Q
    ||||||||||| |||||||  |||||||||||||| |||||||||||||||||||||||    
T  227423 agggggcaaaaccaaaagtgacctatattacagggaggtaaagacctattaaccctaat 227365  T

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Target: scaffold0014; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 228584 - 228645
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattaca--gggggtaaagacctattaaccc 196  Q
    |||||||||||||||||  ||||||  |||||||||||  ||||||||||||||||||||||    
T  228584 ttttacagggggcaaaactaaaagtgacctatattacacggggggtaaagacctattaaccc 228645  T

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Target: scaffold0769 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 4176 - 4211
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||||||||||||||||||||||||    
T  4176 cctatattacagggggtaaagacctattaaccctaa 4211  T

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Target: scaffold0289 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 9978 - 9919
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||  |||| ||||||||||||||||||||||||||||||   ||||||||||    
T  9978 tttacaggggtgaaaaccaaaagtaccctatattacagggggtaaagttttattaaccct 9919  T

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Target: scaffold0933 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 2717 - 2775
Alignment:
Q  138 tttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccc 196  Q
    |||||| ||||||||  |||||||||||||||||||||||||||||   ||||||||||    
T  2717 tttacatggggcaaatccaaaagtaccctatattacagggggtaaaactctattaaccc 2775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 4452 - 4494
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaatataaat 206  Q
    ||||||||||||||||||||||||||||||||| ||| |||||    
T  4452 cctatattacagggggtaaagacctattaacccaaatttaaat 4494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 4281 - 4248
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||||| |||||||||||||||||||    
T  4281 cctatattacagggagtaaagacctattaaccct 4248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 7889 - 7856
Alignment:
Q  166 tatattacagggggtaaagacctattaaccctaa 199  Q
    ||||||||||||||||||||||||||||||||||    
T  7889 tatattacagggggtaaagacctattaaccctaa 7856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 8120 - 8156
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccctaat 200  Q
    |||||||||||| ||||||||||||||||||||||||    
T  8120 cctatattacagtgggtaaagacctattaaccctaat 8156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 91082 - 91049
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccct 197  Q
    ||||||||||||||||||||||||||||||||||    
T  91082 cctatattacagggggtaaagacctattaaccct 91049  T

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Target: scaffold0192 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 14445 - 14505
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccct 197  Q
    |||||||||||| |||||||||| |  |||||||||||||||||||||  | |||||||||    
T  14445 ttttacaggggggaaaatcaaaaatgacctatattacagggggtaaagcaccattaaccct 14505  T

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Target: scaffold0142 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 34851 - 34883
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  34851 cctatattacagggggtaaagacctattaaccc 34883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 1859 - 1827
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  1859 cctatattacagggggtaaagacctattaaccc 1827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 26340 - 26308
Alignment:
Q  164 cctatattacagggggtaaagacctattaaccc 196  Q
    |||||||||||||||||||||||||||||||||    
T  26340 cctatattacagggggtaaagacctattaaccc 26308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 4023 - 4053
Alignment:
Q  165 ctatattacagggggtaaagacctattaacc 195  Q
    |||||||||||||||||||||||||||||||    
T  4023 ctatattacagggggtaaagacctattaacc 4053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 53520 - 53584
Alignment:
Q  137 ttttacagggggcaaaatcaaaagtaccctatattacagggggtaaagacctattaaccctaata 201  Q
    |||||||||||| |||| ||||| |  |||||||||||||||||||||  |  ||||||||||||    
T  53520 ttttacaggggggaaaaccaaaaatgacctatattacagggggtaaagcaccgttaaccctaata 53584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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