View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14784_high_69 (Length: 287)
Name: NF14784_high_69
Description: NF14784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14784_high_69 |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 38750468 - 38750198
Alignment:
| Q |
1 |
gatacagacaggtttcttttatgacgaaatcgtagagattagctagaatggagttgttcaccaaaaagtatactgttttgattggnnnnnnnnn-ttata |
99 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
38750468 |
gatacagacaggtttcttttatgacgaaatcgtagagattagctagaatggagttgttcaccaaaaagtatactgttttgattggaaaaaaaaaattata |
38750369 |
T |
|
| Q |
100 |
caacaattatactattttgatgaagaaggaaaaatgtgcgtgttcgctattttgataattcttgaatgacccatcacaattaaaaaatcaatatttttgt |
199 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38750368 |
caacaattatactattttgatgaagaaggaaaaatgtgcgtgttcgctgttttgataattcttgaatgacccatcacaattaaaaaatcaatatttttgt |
38750269 |
T |
|
| Q |
200 |
ctcttcaatgcgtagcaaatgaacaaatactactgcctttgtccatatatagtttatgtaatcaatttcgt |
270 |
Q |
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|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
38750268 |
ctcttcaatgcgtagcaaatgaacaaatattactgcctttgtccatatatagtttatgtaatcaatttcgt |
38750198 |
T |
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