View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14784_high_72 (Length: 283)
Name: NF14784_high_72
Description: NF14784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14784_high_72 |
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Alignment Details
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 530680 - 530414
Alignment:
| Q |
1 |
acaagagacactccagatccaacattcataattggttctccatttgttatacacccatctggaaaaatagcgaatccggaaggaagcagagtgagacgac |
100 |
Q |
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| T |
530680 |
acaagagaccctccagatccaacattcataattggtcctccatttgttatacacccatctggaaaaatagcgaatccggaaggaagcagagtgagacgac |
530581 |
T |
|
| Q |
101 |
ttgagtcgccgccattcaggatttcatgcattgtaggtatttgcacaggcgcatatactacatatgacccagttacatcagtgcaattctcttgcagtac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
530580 |
ttgagtcgccgccattcaggatttcatgcattgtaggtatttgcacaggcgcatatactacatatgagccagttacatcagtgcaattctcttgcagtac |
530481 |
T |
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| Q |
201 |
taccacatcactctgctctgaattttcactctacagtaaaaatatatttacccaaagagaatgttag |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
530480 |
taccacatcactctgctctgaattttcactctacagtaaaaatatatttacccaaagagaatgttag |
530414 |
T |
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