View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14784_high_88 (Length: 244)
Name: NF14784_high_88
Description: NF14784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14784_high_88 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 35331969 - 35331726
Alignment:
| Q |
1 |
taataaataagattagagatatcaatatcaatataggagaatgacacaaaatcatcgtgtctttcccgccttaaagatagtagatcgggccccatttttt |
100 |
Q |
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| T |
35331969 |
taataaatatgattagagatatcaatatcaatataggagaatgacacaaaatcatcgtgtctttcccgccttaaagatagtagatcgggccccatttttt |
35331870 |
T |
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| Q |
101 |
gggggagatttcgatttagcatcgacacatcagattgaaaatgtgtgactatctttaaggaagttaatcatgtttattttctcaaattattattggtttc |
200 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
35331869 |
gggggagatttcgatttagcatcgacacattagattgaaaatgtgtgactatctttaaggaagttaatcatgtttattttctcaaattattatcagtttc |
35331770 |
T |
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| Q |
201 |
aacctctaagtggagtggttcatagggaggttttagtttacttt |
244 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
35331769 |
aacctgtaagtggagtggttcatagggaggttttagtttacttt |
35331726 |
T |
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