View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14784_high_89 (Length: 243)

Name: NF14784_high_89
Description: NF14784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14784_high_89
NF14784_high_89
[»] chr8 (8 HSPs)
chr8 (98-238)||(12660987-12661127)
chr8 (1-91)||(12660845-12660935)
chr8 (124-213)||(20662974-20663063)
chr8 (124-213)||(44213091-44213180)
chr8 (124-213)||(30548337-30548426)
chr8 (136-225)||(4634854-4634942)
chr8 (171-225)||(11697032-11697086)
chr8 (136-180)||(27272616-27272660)
[»] chr6 (9 HSPs)
chr6 (126-238)||(2624779-2624892)
chr6 (123-196)||(33979098-33979171)
chr6 (124-213)||(250020-250109)
chr6 (124-213)||(12579833-12579922)
chr6 (136-225)||(22975785-22975873)
chr6 (136-225)||(23812528-23812616)
chr6 (126-183)||(33300595-33300652)
chr6 (136-196)||(3052073-3052133)
chr6 (171-223)||(11470837-11470889)
[»] chr5 (9 HSPs)
chr5 (136-238)||(2366907-2367009)
chr5 (130-196)||(37464493-37464559)
chr5 (136-196)||(18037298-18037358)
chr5 (136-188)||(39169414-39169466)
chr5 (171-225)||(36366189-36366243)
chr5 (136-183)||(19365872-19365919)
chr5 (136-183)||(38041559-38041606)
chr5 (171-225)||(22602699-22602753)
chr5 (136-180)||(32977169-32977213)
[»] chr3 (7 HSPs)
chr3 (136-238)||(30766378-30766480)
chr3 (136-224)||(6093211-6093299)
chr3 (136-213)||(918794-918871)
chr3 (136-213)||(44072775-44072852)
chr3 (171-225)||(37611459-37611513)
chr3 (131-183)||(22759118-22759170)
chr3 (145-193)||(44186935-44186983)
[»] chr7 (12 HSPs)
chr7 (124-213)||(19033702-19033791)
chr7 (124-213)||(20720845-20720934)
chr7 (124-213)||(20765507-20765596)
chr7 (124-213)||(29491085-29491174)
chr7 (124-196)||(34282150-34282222)
chr7 (130-196)||(33230014-33230080)
chr7 (171-225)||(27840437-27840491)
chr7 (185-238)||(23476692-23476745)
chr7 (136-183)||(23476655-23476702)
chr7 (136-183)||(45121957-45122004)
chr7 (136-189)||(8998425-8998478)
chr7 (173-225)||(12960530-12960582)
[»] chr4 (14 HSPs)
chr4 (124-213)||(43332507-43332596)
chr4 (124-213)||(51452574-51452663)
chr4 (125-213)||(26924320-26924408)
chr4 (130-213)||(10259386-10259469)
chr4 (130-213)||(24077455-24077538)
chr4 (136-215)||(28120252-28120331)
chr4 (124-182)||(19591008-19591066)
chr4 (130-196)||(21565003-21565069)
chr4 (123-225)||(56541652-56541753)
chr4 (126-183)||(1975321-1975378)
chr4 (136-189)||(49711691-49711744)
chr4 (171-225)||(33486445-33486499)
chr4 (171-225)||(43014655-43014709)
chr4 (136-188)||(23992387-23992439)
[»] chr2 (8 HSPs)
chr2 (124-196)||(3711071-3711143)
chr2 (124-196)||(11866273-11866345)
chr2 (136-213)||(35357678-35357755)
chr2 (136-196)||(24278967-24279027)
chr2 (124-183)||(7984041-7984100)
chr2 (123-180)||(1691482-1691539)
chr2 (131-188)||(7768743-7768800)
chr2 (145-225)||(32726066-32726146)
[»] scaffold0103 (1 HSPs)
scaffold0103 (136-213)||(12920-12997)
[»] scaffold0440 (1 HSPs)
scaffold0440 (136-190)||(8381-8435)
[»] chr1 (5 HSPs)
chr1 (136-190)||(1954408-1954462)
chr1 (136-180)||(23909784-23909828)
chr1 (136-183)||(34265943-34265990)
chr1 (171-225)||(20767479-20767533)
chr1 (171-225)||(26429187-26429241)
[»] scaffold0499 (1 HSPs)
scaffold0499 (136-183)||(10713-10760)
[»] scaffold0073 (1 HSPs)
scaffold0073 (136-189)||(33455-33508)
[»] scaffold0004 (1 HSPs)
scaffold0004 (126-183)||(81013-81070)


Alignment Details
Target: chr8 (Bit Score: 92; Significance: 8e-45; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 98 - 238
Target Start/End: Original strand, 12660987 - 12661127
Alignment:
Q  98 ttaaataacgtatcttgtnnnnnnnttatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgac 197  Q
    ||||||||||||||||||       ||||||||| | |||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  12660987 ttaaataacgtatcttgtaaaaaaattatttcaagatgaaaataagcaaattaatgaatattgcacaaacattagaaatatttatccaaatatttatgaa 12661086  T
Q  198 agcctttccaagtcttgattcatgaaaacaacatatatttt 238  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  12661087 agcctttccaagtcttgattcatgaaaacaacatatgtttt 12661127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12660845 - 12660935
Alignment:
Q  1 cctactgaatggaaaagaatggtttcttgcaccagaaaaagatataagaaatattattaataatgtctttaattattattggcactcaata 91  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12660845 cctactaaatggaaaagaatggtttcttgcaccagaaaaagatataagaaatattattaataatgtttttaattattattggcactcaata 12660935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 20662974 - 20663063
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  20662974 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 20663063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 44213091 - 44213180
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  44213091 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 44213180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 30548337 - 30548426
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| ||||| |||||||  |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  30548337 tattttaaaagaaaaatgatcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 30548426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 4634854 - 4634942
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    |||||||| |||||||||||||||| ||||||| ||   || |||||| |||||||||||| ||| || |||||| ||||||||||||||    
T  4634854 aaaatgagcaaattaatgaatattgcacaaacactatttatctttatc-aaatatttatgaaagctttaccaagtattgattcatgaaaa 4634942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 11697086 - 11697032
Alignment:
Q  171 agaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    ||||||||||||| |||||||||||| |||  | |||||||||||||||||||||    
T  11697086 agaaatatttatcaaaatatttatgaaagctctaccaagtcttgattcatgaaaa 11697032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 27272660 - 27272616
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatattt 180  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||    
T  27272660 aaaatgagcaaattaaagaatattgcacaaacattagaaatattt 27272616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 238
Target Start/End: Original strand, 2624779 - 2624892
Alignment:
Q  126 tttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtcttgattcatg-aaa 224  Q
    ||||||| | ||||||||||||||||  || |||| |||||||||| ||||||||||| |||||||||||| |||||| ||||||||||||| ||| |||    
T  2624779 tttcaaaggaaaaatgagaaaattaagaaaaattgcacaaacattaaaaatatttatcaaaatatttatgaaagccttaccaagtcttgatttatgaaaa 2624878  T
Q  225 acaacatatatttt 238  Q
    | ||||||||||||    
T  2624879 aaaacatatatttt 2624892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 33979171 - 33979098
Alignment:
Q  123 ttatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatga 196  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| ||||||||||||    
T  33979171 ttatttcaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatga 33979098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 250109 - 250020
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  250109 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 250020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 12579833 - 12579922
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  12579833 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 12579922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 22975785 - 22975873
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    |||||||| |||||||  || |||| |||||||||| ||||||||||| |||||||||||| || ||| || |||||||||| |||||||    
T  22975785 aaaatgagcaaattaagaaaaattgcacaaacattaaaaatatttatcaaaatatttatgaaagtcttacc-agtcttgatttatgaaaa 22975873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 23812616 - 23812528
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    |||||||| |||||||  || |||| |||||||||| ||||||||||| |||||||||||| || ||| || |||||||||| |||||||    
T  23812616 aaaatgagcaaattaagaaaaattgcacaaacattaaaaatatttatcaaaatatttatgaaagtcttacc-agtcttgatttatgaaaa 23812528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 33300652 - 33300595
Alignment:
Q  126 tttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatc 183  Q
    ||||||| | |||||||| ||||||| |||||||  ||||||||||||||||||||||    
T  33300652 tttcaaaggaaaaatgagtaaattaaggaatatttcacaaacattagaaatatttatc 33300595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 3052073 - 3052133
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatga 196  Q
    |||||||| |||||||||||||||| ||||| |||| |||| |||||| ||||||| ||||    
T  3052073 aaaatgagcaaattaatgaatattgcacaaatattataaatctttatcaaaatattgatga 3052133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 11470837 - 11470889
Alignment:
Q  171 agaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaa 223  Q
    ||||||||||| | |||||||||||| |||  | |||||||||||||||||||    
T  11470837 agaaatatttaccaaaatatttatgaaagctctaccaagtcttgattcatgaa 11470889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 2366907 - 2367009
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaacaacatatat 235  Q
    |||||||| ||||||| |||||||| ||||| |||||||| ||||||| |||||||||  | ||||||  || ||||||||||||||||| | |||||||    
T  2366907 aaaatgagcaaattaaggaatattgcacaaatattagaaagatttatcaaaatatttaacaaagccttatcaggtcttgattcatgaaaagagcatatat 2367006  T
Q  236 ttt 238  Q
    |||    
T  2367007 ttt 2367009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 37464559 - 37464493
Alignment:
Q  130 aaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatga 196  Q
    ||||| |||||||| |||||||||||||||| ||||| |||| |||| |||||| ||||||||||||    
T  37464559 aaaagaaaaatgagcaaattaatgaatattgcacaaaaattataaatctttatcaaaatatttatga 37464493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 18037298 - 18037358
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatga 196  Q
    |||||||| |||||||||||||||| |||||||||| |||| |||||| ||||||| ||||    
T  18037298 aaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatattgatga 18037358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 39169414 - 39169466
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaat 188  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||||| ||||    
T  39169414 aaaatgagaaaattactgaatattgcacaaacattataaatatttatcaaaat 39169466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 36366189 - 36366243
Alignment:
Q  171 agaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    ||||||||||| | |||||||||||| ||| || |||||||||||||||||||||    
T  36366189 agaaatatttaccaaaatatttatgaaagctttaccaagtcttgattcatgaaaa 36366243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 19365919 - 19365872
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatc 183  Q
    |||||||| ||||||| |||||||| |||||||||| |||||||||||    
T  19365919 aaaatgagcaaattaaggaatattgcacaaacattataaatatttatc 19365872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 38041559 - 38041606
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatc 183  Q
    |||||||| ||||||| |||||||| ||||| ||||||||||||||||    
T  38041559 aaaatgagcaaattaaggaatattgcacaaatattagaaatatttatc 38041606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 22602699 - 22602753
Alignment:
Q  171 agaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    ||||||||||| | |||||||||||| |||  | |||||||||||||||||||||    
T  22602699 agaaatatttaccaaaatatttatgaaagctctaccaagtcttgattcatgaaaa 22602753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 32977169 - 32977213
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatattt 180  Q
    |||||||| |||||||  ||||||| |||||||||||||||||||    
T  32977169 aaaatgagtaaattaagaaatattgcacaaacattagaaatattt 32977213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 30766480 - 30766378
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaacaacatatat 235  Q
    ||||| || ||||||| |||||||  | |||||||||||||||||||| |||||||||  | |||||| ||||||||||||| ||||||| | |||||||    
T  30766480 aaaataagtaaattaaggaatattacataaacattagaaatatttatcaaaatatttaccaaagccttaccaagtcttgattgatgaaaagagcatatat 30766381  T
Q  236 ttt 238  Q
    |||    
T  30766380 ttt 30766378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 6093211 - 6093299
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaa 224  Q
    ||||| || ||||||||| |||||| ||||||||||||||| |||| | |||||||||||| |||  |  |||||||||||||||||||    
T  6093211 aaaataagcaaattaatggatattgcacaaacattagaaatttttaccaaaatatttatgaaagctctatcaagtcttgattcatgaaa 6093299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 918871 - 918794
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    |||| ||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  918871 aaaaagagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 918794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 44072775 - 44072852
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| || |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  44072775 aaaattagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 44072852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 37611459 - 37611513
Alignment:
Q  171 agaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    ||||||||||||| |||||||||||| |||  | |||||||||||||||||||||    
T  37611459 agaaatatttatcaaaatatttatgaaagctctaccaagtcttgattcatgaaaa 37611513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 22759118 - 22759170
Alignment:
Q  131 aaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatc 183  Q
    |||||||||  || ||||||| |||||||| ||||||||||||||||||||||    
T  22759118 aaaggaaaaatagcaaattaaggaatattgcacaaacattagaaatatttatc 22759170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 44186935 - 44186983
Alignment:
Q  145 aaattaatgaatattggacaaacattagaaatatttatccaaatattta 193  Q
    ||||||||| |||||| ||||||||||||||| |||| | |||||||||    
T  44186935 aaattaatggatattgcacaaacattagaaatttttaccaaaatattta 44186983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 19033702 - 19033791
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  19033702 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatttttatcaaaatatttatgaaagctttatcaagtctt 19033791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 20720934 - 20720845
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  20720934 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatttttatcaaaatatttatgaaagctttatcaagtctt 20720845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 20765596 - 20765507
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  20765596 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 20765507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 29491174 - 29491085
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  29491174 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 29491085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 34282150 - 34282222
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatga 196  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| ||||||||||||    
T  34282150 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatga 34282222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 33230014 - 33230080
Alignment:
Q  130 aaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatga 196  Q
    ||||| ||||| || |||||||||||||||| |||||||||| |||| |||||| ||||||||||||    
T  33230014 aaaagaaaaataagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatga 33230080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 27840491 - 27840437
Alignment:
Q  171 agaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    ||||||||||||| |||||||||||| |||  | |||||||||||||||||||||    
T  27840491 agaaatatttatcaaaatatttatgaaagctctaccaagtcttgattcatgaaaa 27840437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 23476692 - 23476745
Alignment:
Q  185 aaatatttatgacagcctttccaagtcttgattcatgaaaacaacatatatttt 238  Q
    |||||||||| | || ||| ||||||||||||||||||||| ||||||||||||    
T  23476692 aaatatttatcaaagtcttaccaagtcttgattcatgaaaataacatatatttt 23476745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 23476655 - 23476702
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatc 183  Q
    |||||||| |||||||  ||||||| ||||||||||||||||||||||    
T  23476655 aaaatgagcaaattaagaaatattgcacaaacattagaaatatttatc 23476702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 45122004 - 45121957
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatc 183  Q
    |||||||| ||||||| ||||| || ||||||||||||||||||||||    
T  45122004 aaaatgagcaaattaaggaatagtgcacaaacattagaaatatttatc 45121957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 8998478 - 8998425
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaata 189  Q
    |||||||| ||||||| ||||| || | |||||||||||||||||||| |||||    
T  8998478 aaaatgagcaaattaaggaatagtgcaaaaacattagaaatatttatcaaaata 8998425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 12960582 - 12960530
Alignment:
Q  173 aaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    ||||||||| | |||||||||||| |||  | |||||||||||||||||||||    
T  12960582 aaatatttaccaaaatatttatgaaagctctaccaagtcttgattcatgaaaa 12960530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 43332596 - 43332507
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  43332596 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 43332507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 51452663 - 51452574
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  51452663 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 51452574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 125 - 213
Target Start/End: Original strand, 26924320 - 26924408
Alignment:
Q  125 atttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    |||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  26924320 attttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 26924408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 10259386 - 10259469
Alignment:
Q  130 aaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  10259386 aaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 10259469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 24077455 - 24077538
Alignment:
Q  130 aaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  24077455 aaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 24077538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 28120252 - 28120331
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtcttga 215  Q
    |||||||| |||||||||||||||| |||||||||| |||| ||||||  ||||||||||| ||  || |||||||||||    
T  28120252 aaaatgagtaaattaatgaatattgcacaaacattataaatctttatcagaatatttatgaaagttttaccaagtcttga 28120331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 19591066 - 19591008
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttat 182  Q
    ||||||||| | |||||||| |||||||||||||||| |||||||||| ||||||||||    
T  19591066 tatttcaaaggaaaaatgagcaaattaatgaatattgcacaaacattataaatatttat 19591008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 21565069 - 21565003
Alignment:
Q  130 aaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatga 196  Q
    ||||| |||||||| |||||||||||||||| | |||||||| |||| |||||| ||||||||||||    
T  21565069 aaaagaaaaatgagcaaattaatgaatattgcataaacattataaatctttatcaaaatatttatga 21565003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 56541753 - 56541652
Alignment:
Q  123 ttatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtcttgattcatga 222  Q
    |||||||||| | ||||| || |||||||  ||  ||| ||||||||||||||||||||| ||| ||||||||| || ||| ||| |||||| |||||||    
T  56541753 ttatttcaaaggaaaaataagcaaattaagaaaagttgcacaaacattagaaatatttat-caattatttatgaaagtcttaccaggtcttgtttcatga 56541655  T
Q  223 aaa 225  Q
    |||    
T  56541654 aaa 56541652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 1975378 - 1975321
Alignment:
Q  126 tttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatc 183  Q
    ||||||| | |||||||| ||||||| |||||||| ||||| ||||||||||||||||    
T  1975378 tttcaaaggaaaaatgagcaaattaaggaatattgcacaaatattagaaatatttatc 1975321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 49711691 - 49711744
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaata 189  Q
    |||||||| ||||||| ||||| || |||||||||||||||||||||| |||||    
T  49711691 aaaatgagcaaattaaggaatagtgcacaaacattagaaatatttatcaaaata 49711744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 33486445 - 33486499
Alignment:
Q  171 agaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    ||||||||||| | |||||||||||| |||  | |||||||||||||||||||||    
T  33486445 agaaatatttaccaaaatatttatgaaagctctaccaagtcttgattcatgaaaa 33486499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 43014655 - 43014709
Alignment:
Q  171 agaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    ||||||||||| | |||||||||||| |||  | |||||||||||||||||||||    
T  43014655 agaaatatttaccaaaatatttatgaaagctctaccaagtcttgattcatgaaaa 43014709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 23992387 - 23992439
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaat 188  Q
    |||||||| |||||| ||||||||| |||||||||  ||||||||||| ||||    
T  23992387 aaaatgagcaaattactgaatattgcacaaacattttaaatatttatcaaaat 23992439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 3711143 - 3711071
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatga 196  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| ||||||||||||    
T  3711143 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatga 3711071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 11866273 - 11866345
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatga 196  Q
    ||||| ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| ||||||||||||    
T  11866273 tattttaaaagaaaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatga 11866345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 35357678 - 35357755
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||  ||||||||    
T  35357678 aaaatgagcaaattaatgaatattgtacaaacattataaatctttatcaaaatatttatgaaagctttatcaagtctt 35357755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 24279027 - 24278967
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatga 196  Q
    |||||||| |||||||||||||||| |||||||||| |||| |||||| ||||||||||||    
T  24279027 aaaatgagcaaattaatgaatattgcacaaacattataaatctttatcaaaatatttatga 24278967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 7984041 - 7984100
Alignment:
Q  124 tatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatc 183  Q
    ||||||||| | |||||||| ||||||| ||| |||| ||||||||||||||||||||||    
T  7984041 tatttcaaaggaaaaatgagcaaattaaggaacattgcacaaacattagaaatatttatc 7984100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 1691482 - 1691539
Alignment:
Q  123 ttatttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatattt 180  Q
    ||||||||||   |||||||| ||||||| |||||||| |||||||||||||||||||    
T  1691482 ttatttcaaagaaaaaatgagcaaattaaggaatattgcacaaacattagaaatattt 1691539  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 7768743 - 7768800
Alignment:
Q  131 aaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaat 188  Q
    ||||||||||||| |||||| | ||||||| |||||||||| ||||||||||| ||||    
T  7768743 aaaggaaaatgagcaaattattaaatattgcacaaacattataaatatttatcaaaat 7768800  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 32726066 - 32726146
Alignment:
Q  145 aaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    ||||||||| |||||| | ||||||||||||| |||| | ||||||||| || |||  |  ||||||||||||||||||||    
T  32726066 aaattaatggatattgcataaacattagaaatttttaccaaaatatttacgaaagctctatcaagtcttgattcatgaaaa 32726146  T

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Target: scaffold0103 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 12997 - 12920
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatatttatgacagcctttccaagtctt 213  Q
    |||||||| |||||||  || |||| |||||||||| ||||||||||| |||||||||||| |||||| |||||||||    
T  12997 aaaatgaggaaattaagaaaaattgcacaaacattaaaaatatttatcaaaatatttatgaaagccttaccaagtctt 12920  T

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Target: scaffold0440 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 8381 - 8435
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatat 190  Q
    |||||||| |||||||||||||||| ||||||||||||||| | |||||||||||    
T  8381 aaaatgagcaaattaatgaatattgcacaaacattagaaatctatatccaaatat 8435  T

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Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 1954408 - 1954462
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaatat 190  Q
    |||||||| |||||||||||||||  ||||| ||||||||| |||||||||||||    
T  1954408 aaaatgagcaaattaatgaatattacacaaatattagaaatctttatccaaatat 1954462  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 23909784 - 23909828
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatattt 180  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||    
T  23909784 aaaatgagcaaattaaggaatattgcacaaacattagaaatattt 23909828  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 34265943 - 34265990
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatc 183  Q
    |||||||| ||||||| |||||||  ||||||||||||||||||||||    
T  34265943 aaaatgagcaaattaaggaatatttcacaaacattagaaatatttatc 34265990  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 20767533 - 20767479
Alignment:
Q  171 agaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    ||||||||||| | |||||||||||| |||  | |||||||||||||||||||||    
T  20767533 agaaatatttaccaaaatatttatgaaagctctaccaagtcttgattcatgaaaa 20767479  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 26429187 - 26429241
Alignment:
Q  171 agaaatatttatccaaatatttatgacagcctttccaagtcttgattcatgaaaa 225  Q
    ||||||||||| | |||||||||||| |||  | |||||||||||||||||||||    
T  26429187 agaaatatttaccaaaatatttatgaaagctctaccaagtcttgattcatgaaaa 26429241  T

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Target: scaffold0499 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 10713 - 10760
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatc 183  Q
    |||||||| ||||||| ||||| || ||||||||||||||||||||||    
T  10713 aaaatgagcaaattaaggaatagtgcacaaacattagaaatatttatc 10760  T

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Target: scaffold0073 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 33455 - 33508
Alignment:
Q  136 aaaatgagaaaattaatgaatattggacaaacattagaaatatttatccaaata 189  Q
    |||||||| ||||||| ||||  || |||||||||||||||||||||| |||||    
T  33455 aaaatgagcaaattaaggaatcgtgcacaaacattagaaatatttatcaaaata 33508  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 81070 - 81013
Alignment:
Q  126 tttcaaaaggaaaatgagaaaattaatgaatattggacaaacattagaaatatttatc 183  Q
    ||||||| | |||||||| ||||||| |||||||| || ||||||| |||||||||||    
T  81070 tttcaaaggaaaaatgagcaaattaaggaatattgcacgaacattataaatatttatc 81013  T

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